Rorug04G0176400

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000762
Physical Location & Seq
Reverse (-)
31033092 .. 31033674
583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0176400.1

Sequence Viewer

Length: 429 bp
ATGGTTTATGTTCACATAGGCGACATCAAGTATCATGAAAAGGGTAGTTTAGCCACAGTGTTGAGCAAAGATGAGGAAGCTAAAGAACTGGGGTGGAGTAAAAGGGTGAATATTGTTAAAGGTGTAGCTCATGCCTTGTGTTACATGCACCATGAATGCTTGCCACCAATTGTGCACCGGGACATATCGAACTTTGGCACCGCTAAGTTCTTAAATCCAAACTCAGCTAATTGGATTGCACTTGCAGGTACTTACGGATATGTTGCACCAGCATTTGCATGCCTGAATTCCGGTCCTCAATCTCGTCCAACAATGAAACAAGGTTCTCAACAATTTGAAACTCATCAGAGACTGCATTTGTCAAAGCCATTACCTATGATAACACTAGGTGAATTGCTTGCTCTCGATGGTTTGGCTTTGGCTATTTGA

Protein Analysis

142

Amino Acids

15.61

Weight (kDa)

8.46

Isoelectric Point (pI)

45.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 236
AccB1I GGYRCC 1 cut(s) 197
AciI CCGC 1 cut(s) 201
AcsI RAATTY 1 cut(s) 286
AdeI CACNNNGTG 1 cut(s) 389
AfaI GTAC 1 cut(s) 250
AgsI TTSAA 1 cut(s) 338
AluBI AGCT 3 cut(s) 80, 128, 227
AluI AGCT 3 cut(s) 80, 128, 227
Alw21I GWGCWC 1 cut(s) 177
Alw26I GTCTC 1 cut(s) 343
Alw44I GTGCAC 1 cut(s) 173
AlwNI CAGNNNCTG 1 cut(s) 352
ApaLI GTGCAC 1 cut(s) 173
ApoI RAATTY 1 cut(s) 286
AspS9I GGNCC 1 cut(s) 293
AsuC2I CCSGG 1 cut(s) 179
AsuHPI GGTGA 2 cut(s) 118, 401
AvaII GGWCC 1 cut(s) 293
BaeGI GKGCMC 1 cut(s) 177
BanI GGYRCC 1 cut(s) 197
Bbv12I GWGCWC 1 cut(s) 177
BccI CCATC 1 cut(s) 401
BcnI CCSGG 1 cut(s) 179
BcoDI GTCTC 1 cut(s) 343
BfaI CTAG 1 cut(s) 386
BfuAI ACCTGC 1 cut(s) 236
Bme1390I CCNGG 1 cut(s) 179
Bme18I GGWCC 1 cut(s) 293
BmgT120I GGNCC 1 cut(s) 293
BmiI GGNNCC 1 cut(s) 199
BmrFI CCNGG 1 cut(s) 179
BmrI ACTGGG 1 cut(s) 98
BmuI ACTGGG 1 cut(s) 98
BpuMI CCSGG 1 cut(s) 179
BsaWI WCCGGW 1 cut(s) 290
Bse1I ACTGG 1 cut(s) 93
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 1 cut(s) 93
BseSI GKGCMC 1 cut(s) 177
BshNI GGYRCC 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 177
BsiSI CCGG 2 cut(s) 178, 291
BslFI GGGAC 1 cut(s) 194
BsmAI GTCTC 1 cut(s) 343
BsmFI GGGAC 1 cut(s) 194
BsmI GAATGC 1 cut(s) 161
Bsp1286I GDGCHC 1 cut(s) 177
BspACI CCGC 1 cut(s) 201
BspCNI CTCAG 1 cut(s) 236
BspHI TCATGA 1 cut(s) 34
BspLI GGNNCC 1 cut(s) 199
BspMI ACCTGC 1 cut(s) 236
BspT107I GGYRCC 1 cut(s) 197
BsrI ACTGG 1 cut(s) 93
Bst4CI ACNGT 1 cut(s) 58
BstC8I GCNNGC 3 cut(s) 161, 280, 399
BstDEI CTNAG 2 cut(s) 204, 223
BstMAI GTCTC 1 cut(s) 343
BstNSI RCATGY 2 cut(s) 148, 282
BstSCI CCNGG 1 cut(s) 177
BstSLI GKGCMC 1 cut(s) 177
BtsIMutI CAGTG 1 cut(s) 63
BveI ACCTGC 1 cut(s) 236
Cac8I GCNNGC 3 cut(s) 161, 280, 399
CaiI CAGNNNCTG 1 cut(s) 352
CciI TCATGA 1 cut(s) 34
Cfr13I GGNCC 1 cut(s) 293
Csp6I GTAC 1 cut(s) 249
CviAII CATG 5 cut(s) 35, 131, 145, 152, 279
CviJI RGCY 7 cut(s) 53, 80, 128, 227, 367, 416, 422
CviKI_1 RGCY 7 cut(s) 53, 80, 128, 227, 367, 416, 422
CviQI GTAC 1 cut(s) 249
DdeI CTNAG 2 cut(s) 204, 223
DraIII CACNNNGTG 1 cut(s) 389
Eco47I GGWCC 1 cut(s) 293
EcoRI GAATTC 1 cut(s) 286
FaeI CATG 5 cut(s) 38, 134, 148, 155, 282
FaqI GGGAC 1 cut(s) 194
FatI CATG 5 cut(s) 34, 130, 144, 151, 278
FspBI CTAG 1 cut(s) 386
HapII CCGG 2 cut(s) 178, 291
Hin1II CATG 5 cut(s) 38, 134, 148, 155, 282
HpaII CCGG 2 cut(s) 178, 291
HphI GGTGA 2 cut(s) 118, 401
Hpy166II GTNNAC 2 cut(s) 13, 175
Hpy188I TCNGA 1 cut(s) 348
Hpy188III TCNNGA 2 cut(s) 35, 404
Hpy8I GTNNAC 2 cut(s) 13, 175
HpyCH4III ACNGT 1 cut(s) 58
HpyCH4V TGCA 7 cut(s) 148, 175, 239, 245, 266, 278, 355
HpyF3I CTNAG 2 cut(s) 204, 223
Hsp92II CATG 5 cut(s) 38, 134, 148, 155, 282
LpnPI CCDG 6 cut(s) 74, 191, 231, 282, 296, 304
MaeI CTAG 1 cut(s) 386
MaeIII GTNAC 1 cut(s) 140
MfeI CAATTG 1 cut(s) 168
MhlI GDGCHC 1 cut(s) 177
MluCI AATT 5 cut(s) 168, 229, 286, 332, 392
MmeI TCCRAC 1 cut(s) 332
MnlI CCTC 2 cut(s) 67, 306
MseI TTAA 2 cut(s) 117, 212
MslI CAYNNNNRTG 1 cut(s) 277
MspI CCGG 2 cut(s) 178, 291
MspR9I CCNGG 1 cut(s) 179
MunI CAATTG 1 cut(s) 168
Mva1269I GAATGC 1 cut(s) 161
NciI CCSGG 1 cut(s) 179
NlaIII CATG 5 cut(s) 38, 134, 148, 155, 282
NlaIV GGNNCC 1 cut(s) 199
NspI RCATGY 2 cut(s) 148, 282
PaeI GCATGC 1 cut(s) 282
PagI TCATGA 1 cut(s) 34
PctI GAATGC 1 cut(s) 161
PspN4I GGNNCC 1 cut(s) 199
PspPI GGNCC 1 cut(s) 293
PstNI CAGNNNCTG 1 cut(s) 352
RsaI GTAC 1 cut(s) 250
RsaNI GTAC 1 cut(s) 249
RseI CAYNNNNRTG 1 cut(s) 277
SaqAI TTAA 2 cut(s) 117, 212
Sau96I GGNCC 1 cut(s) 293
ScrFI CCNGG 1 cut(s) 179
SduI GDGCHC 1 cut(s) 177
SetI ASST 8 cut(s) 82, 124, 130, 229, 250, 325, 376, 391
SinI GGWCC 1 cut(s) 293
SmiMI CAYNNNNRTG 1 cut(s) 277
SphI GCATGC 1 cut(s) 282
Sse9I AATT 5 cut(s) 168, 229, 286, 332, 392
SsiI CCGC 1 cut(s) 201
SspI AATATT 1 cut(s) 112
SspMI CTAG 1 cut(s) 386
StyD4I CCNGG 1 cut(s) 177
TaaI ACNGT 1 cut(s) 58
TaqI TCGA 2 cut(s) 188, 405
TasI AATT 5 cut(s) 168, 229, 286, 332, 392
Tru1I TTAA 2 cut(s) 117, 212
Tru9I TTAA 2 cut(s) 117, 212
TscAI CASTG 1 cut(s) 63
TspDTI ATGAA 3 cut(s) 51, 168, 329
TspGWI ACGGA 1 cut(s) 270
TspRI CASTG 1 cut(s) 63
VneI GTGCAC 1 cut(s) 173
VpaK11BI GGWCC 1 cut(s) 293
XapI RAATTY 1 cut(s) 286
XceI RCATGY 2 cut(s) 148, 282
XspI CTAG 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.