Rroxscaffold_7G00161490

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
4225974 .. 4230103
4130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00161490.1

Sequence Viewer

Length: 1509 bp
ATGGCGGTTTCCGGTGATCTGAAGATGAAGCTCGTCAAAGGCGATGCCGGTTACGTCCTCGAAGATGTGCCTCATATCGCCGATTACTTGTCCGATCTTCCTACCTATCCCAATCCACTGCAAATCAATCCTGCTTACTCTGTAGTCAAGTACGAACTACTTTTCCAGAACAGAACAATGATCTATGCTTTTGGTTTGATTCGTTTCCAGCAATATTTTGTTAACCAAGATGACACTGTTGCTCAAAAGATTGTTGTGCACAAGGATAGTCCAAGAGGGACACACCTTCGGCGAGCAGGACCACGCCAAAAGGTGTATTTTGAGGCGGATGAAGTGCATGCCTGTATTGTGACTTGTGGTGGTTTGTGCCCTGGGCTCAACACAGTGATCAGGGAAATTGTCTGTGGACTTTATCACATGTATGGTGTCACCAGGGTTCTTGGAATAGATGGAGGATATAGTGGTTTCTATTCCCGAAATACTATTGAGTTGACACCTAGGGTTGTGAATGACATCCACAAACGTGGTGGTACTATCCTTGGGACATCACGAGGAGGCTATGATACCTCGAAGATAGTTGACAGCATTCATGATCGTGGAATTAACCATGTTTACATAATTGGAGGTGATGGAACTCAAAAAGGAGCATCTGTGATATTTGAGGAAATTAGACGCCGTGGCCTCAAAGTTTCTGTTGTAGGAGTTCCTAAAACAATAGACAATGACATACCGGTTATAGATAGATCCTTTGGCTTTGATACTGCAGTTGAGGAGGCCCAGCGTGCCATATGTGCAGCTCATGTGGAAGCTGAAAGTATTGAGCATGGTATTGGTCTTGTGAAGCTAATGGGACGCTACAGCGGTTTCATAGCTATGTATGCTACACTTGCCAGTCGAGATGTGGACTGTTGTTTGATTCCAGAGTCCCCCTTCTTTCTTGAAGGACGAGGTGGACTTTTTGAGTTCATTGAAAAACGACTCAAAGAAAATGGACATATGGTTATTGTGATTGCTGAGGGAGCAGGACAGGATCTTCTTTCAGAGAGCTTGCAATCCATGAACCAGCAAGATGCTTCAGGAAACAAGCTACTTCAAGATGTTGGGTTATGGATATCTCAGAGGATCAAGGATCACTTTGTGAGACAACAAAAGATGTCTATTAATCTGAAATATATAGATCCTACATACATGATCAGGGCTATTCCAGGTAATGCAGCTGACAATGTCTACTGCACACTGCTGGCTCAAAGTGCCGTTCATGGAGCAATGGCAGGGTTCACGGGCTTTGTAGTTGGGCCTGTCAATGGAAGACATTCTTACATTCCTTTTAATCATATTACTGATAGACAGAACAAGGTTGTGATTACCGATAGGATGTGGGCACGACTCCTTTCTTCAACCAACCAGCCGAGCTTCTTGAACCACAAAGACGTTGATGAAGTCCAAAAAGTGGAAGAGCCTCCAACTCAACTGCTAGAAGGGGAAAATTGTGAAGATAGCAAGTACTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

502

Amino Acids

55.74

Weight (kDa)

6.25

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 115 - 420 9.9e-62 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1450
AccI GTMKAC 1 cut(s) 1227
AciI CCGC 3 cut(s) 5, 326, 861
AclWI GGATC 5 cut(s) 738, 1038, 1130, 1137, 1172
AcuI CTGAAG 2 cut(s) 41, 1059
AcyI GRCGYC 1 cut(s) 673
AdeI CACNNNGTG 1 cut(s) 1138
AfaI GTAC 3 cut(s) 152, 532, 1505
AfiI CCNNNNNNNGG 2 cut(s) 1304, 1450
AflIII ACRYGT 1 cut(s) 417
AgeI ACCGGT 1 cut(s) 730
AgsI TTSAA 5 cut(s) 941, 971, 1094, 1398, 1420
AjnI CCWGG 3 cut(s) 370, 431, 1204
AleI CACNNNNGTG 1 cut(s) 522
AloI GAACNNNNNNTCC 2 cut(s) 147, 179
AluBI AGCT 9 cut(s) 31, 797, 809, 844, 872, 1047, 1087, 1217, 1413
AluI AGCT 9 cut(s) 31, 797, 809, 844, 872, 1047, 1087, 1217, 1413
Alw21I GWGCWC 1 cut(s) 261
Alw26I GTCTC 1 cut(s) 1135
Alw44I GTGCAC 1 cut(s) 257
AlwI GGATC 5 cut(s) 738, 1038, 1130, 1137, 1172
AoxI GGCC 3 cut(s) 679, 774, 1295
ApaLI GTGCAC 1 cut(s) 257
ApeKI GCWGC 2 cut(s) 794, 1214
AseI ATTAAT 1 cut(s) 1161
AsiGI ACCGGT 1 cut(s) 730
Asp700I GAANNNNTTC 1 cut(s) 1312
AspA2I CCTAGG 1 cut(s) 497
AspS9I GGNCC 3 cut(s) 299, 775, 1295
AsuHPI GGTGA 3 cut(s) 26, 421, 638
AvaII GGWCC 1 cut(s) 299
AvrII CCTAGG 1 cut(s) 497
BaeGI GKGCMC 3 cut(s) 261, 371, 1384
BaeI ACNNNNGTAYC 2 cut(s) 750, 783
BanII GRGCYC 1 cut(s) 378
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 1 cut(s) 1315
Bbv12I GWGCWC 1 cut(s) 261
BbvCI CCTCAGC 1 cut(s) 1014
BbvI GCAGC 2 cut(s) 806, 1226
BccI CCATC 2 cut(s) 443, 623
BceAI ACGGC 2 cut(s) 660, 1238
BciT130I CCWGG 3 cut(s) 372, 433, 1206
BclI TGATCA 2 cut(s) 387, 1191
BcoDI GTCTC 1 cut(s) 1135
BfaI CTAG 2 cut(s) 498, 1475
BfmI CTRYAG 3 cut(s) 141, 762, 856
BisI GCNGC 2 cut(s) 795, 1215
BlnI CCTAGG 1 cut(s) 497
BlsI GCNGC 2 cut(s) 796, 1216
BmcAI AGTACT 1 cut(s) 1505
Bme1390I CCNGG 3 cut(s) 372, 433, 1206
Bme18I GGWCC 1 cut(s) 299
BmgT120I GGNCC 3 cut(s) 299, 775, 1295
BmrFI CCNGG 3 cut(s) 372, 433, 1206
BmsI GCATC 3 cut(s) 34, 656, 1060
BpiI GAAGAC 1 cut(s) 1315
Bpu10I CCTNAGC 1 cut(s) 1014
BsaHI GRCGYC 1 cut(s) 673
BsaJI CCNNGG 6 cut(s) 370, 371, 432, 497, 538, 676
BsaWI WCCGGW 2 cut(s) 11, 730
BsaXI ACNNNNNCTCC 2 cut(s) 636, 666
Bsc4I CCNNNNNNNGG 2 cut(s) 1304, 1450
Bse118I RCCGGY 2 cut(s) 47, 730
Bse1I ACTGG 1 cut(s) 891
Bse3DI GCAATG 1 cut(s) 1272
BseBI CCWGG 3 cut(s) 372, 433, 1206
BseDI CCNNGG 6 cut(s) 370, 371, 432, 497, 538, 676
BseGI GGATG 3 cut(s) 334, 513, 1380
BseLI CCNNNNNNNGG 2 cut(s) 1304, 1450
BseMI GCAATG 1 cut(s) 1272
BseMII CTCAG 2 cut(s) 1005, 1130
BseNI ACTGG 1 cut(s) 891
BseRI GAGGAG 2 cut(s) 567, 785
BseSI GKGCMC 3 cut(s) 261, 371, 1384
BseXI GCAGC 2 cut(s) 806, 1226
BseYI CCCAGC 1 cut(s) 777
BsgI GTGCAG 2 cut(s) 813, 1216
BshFI GGCC 3 cut(s) 681, 776, 1297
BshTI ACCGGT 1 cut(s) 730
BsiHKAI GWGCWC 1 cut(s) 261
BsiSI CCGG 3 cut(s) 12, 48, 731
BslFI GGGAC 4 cut(s) 292, 556, 864, 910
BslI CCNNNNNNNGG 2 cut(s) 1304, 1450
BsmAI GTCTC 1 cut(s) 1135
BsmFI GGGAC 4 cut(s) 292, 556, 864, 910
BsmI GAATGC 1 cut(s) 585
BsnI GGCC 3 cut(s) 681, 776, 1297
Bsp1286I GDGCHC 4 cut(s) 261, 371, 378, 1384
BspACI CCGC 3 cut(s) 5, 326, 861
BspANI GGCC 3 cut(s) 681, 776, 1297
BspCNI CTCAG 2 cut(s) 1006, 1129
BspHI TCATGA 1 cut(s) 589
BspMAI CTGCAG 1 cut(s) 766
BspPI GGATC 5 cut(s) 738, 1038, 1130, 1137, 1172
BspQI GCTCTTC 1 cut(s) 1449
BsrDI GCAATG 1 cut(s) 1272
BsrFI RCCGGY 2 cut(s) 47, 730
BsrI ACTGG 1 cut(s) 891
BssAI RCCGGY 2 cut(s) 47, 730
BssECI CCNNGG 6 cut(s) 370, 371, 432, 497, 538, 676
BssNI GRCGYC 1 cut(s) 673
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 2 cut(s) 497, 538
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 3 cut(s) 372, 433, 1206
Bst4CI ACNGT 3 cut(s) 238, 385, 908
Bst6I CTCTTC 1 cut(s) 1449
BstACI GRCGYC 1 cut(s) 673
BstC8I GCNNGC 5 cut(s) 294, 339, 783, 1049, 1242
BstDEI CTNAG 2 cut(s) 1014, 1116
BstDSI CCRYGG 1 cut(s) 676
BstF5I GGATG 3 cut(s) 334, 513, 1380
BstMAI GTCTC 1 cut(s) 1135
BstMWI GCNNNNNNNGC 6 cut(s) 782, 791, 878, 887, 1019, 1250
BstNI CCWGG 3 cut(s) 372, 433, 1206
BstNSI RCATGY 2 cut(s) 341, 421
BstSCI CCNGG 3 cut(s) 370, 431, 1204
BstSFI CTRYAG 3 cut(s) 141, 762, 856
BstSLI GKGCMC 3 cut(s) 261, 371, 1384
BstV1I GCAGC 2 cut(s) 806, 1226
BstV2I GAAGAC 1 cut(s) 1315
BstX2I RGATCY 3 cut(s) 743, 1030, 1177
BstXI CCANNNNNNTGG 1 cut(s) 524
BstYI RGATCY 3 cut(s) 743, 1030, 1177
BsuRI GGCC 3 cut(s) 681, 776, 1297
BtgI CCRYGG 1 cut(s) 676
BtgZI GCGATG 1 cut(s) 57
BtsCI GGATG 3 cut(s) 334, 513, 1380
BtsI GCAGTG 2 cut(s) 116, 1235
BtsIMutI CAGTG 4 cut(s) 116, 234, 390, 1235
Cac8I GCNNGC 5 cut(s) 294, 339, 783, 1049, 1242
CciI TCATGA 1 cut(s) 589
Cfr10I RCCGGY 2 cut(s) 47, 730
Cfr13I GGNCC 3 cut(s) 299, 775, 1295
CseI GACGC 2 cut(s) 681, 861
Csp6I GTAC 3 cut(s) 151, 531, 1504
CspAI ACCGGT 1 cut(s) 730
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviAII CATG 9 cut(s) 338, 418, 590, 608, 800, 824, 1057, 1189, 1259
CviQI GTAC 3 cut(s) 151, 531, 1504
DdeI CTNAG 2 cut(s) 1014, 1116
DraIII CACNNNGTG 1 cut(s) 1138
Eam1104I CTCTTC 1 cut(s) 1449
EarI CTCTTC 1 cut(s) 1449
EciI GGCGGA 1 cut(s) 341
Eco130I CCWWGG 2 cut(s) 497, 538
Eco24I GRGCYC 1 cut(s) 378
Eco32I GATATC 1 cut(s) 1113
Eco47I GGWCC 1 cut(s) 299
Eco57I CTGAAG 2 cut(s) 41, 1059
EcoRII CCWGG 3 cut(s) 370, 431, 1204
EcoRV GATATC 1 cut(s) 1113
EcoT14I CCWWGG 2 cut(s) 497, 538
EcoT38I GRGCYC 1 cut(s) 378
ErhI CCWWGG 2 cut(s) 497, 538
FaeI CATG 9 cut(s) 341, 421, 593, 611, 803, 827, 1060, 1192, 1262
FalI AAGNNNNNCTT 4 cut(s) 1118, 1150, 1300, 1332
FaqI GGGAC 4 cut(s) 292, 556, 864, 910
FatI CATG 9 cut(s) 337, 417, 589, 607, 799, 823, 1056, 1188, 1258
FauNDI CATATG 2 cut(s) 788, 996
FbaI TGATCA 2 cut(s) 387, 1191
FblI GTMKAC 1 cut(s) 1227
Fnu4HI GCNGC 2 cut(s) 795, 1215
FokI GGATG 3 cut(s) 341, 500, 1387
FriOI GRGCYC 1 cut(s) 378
Fsp4HI GCNGC 2 cut(s) 795, 1215
FspBI CTAG 2 cut(s) 498, 1475
GluI GCNGC 2 cut(s) 795, 1215
GsaI CCCAGC 1 cut(s) 781
HaeIII GGCC 3 cut(s) 681, 776, 1297
HapII CCGG 3 cut(s) 12, 48, 731
HgaI GACGC 2 cut(s) 681, 861
Hin1I GRCGYC 1 cut(s) 673
Hin1II CATG 9 cut(s) 341, 421, 593, 611, 803, 827, 1060, 1192, 1262
HincII GTYRAC 3 cut(s) 223, 492, 580
HindII GTYRAC 3 cut(s) 223, 492, 580
HinfI GANTC 5 cut(s) 199, 916, 923, 978, 1386
HpaI GTTAAC 1 cut(s) 223
HpaII CCGG 3 cut(s) 12, 48, 731
HphI GGTGA 3 cut(s) 26, 421, 638
Hpy188I TCNGA 5 cut(s) 21, 94, 1042, 1119, 1167
HpyAV CCTTC 4 cut(s) 296, 935, 940, 1472
HpyCH4III ACNGT 3 cut(s) 238, 385, 908
HpyCH4IV ACGT 3 cut(s) 54, 523, 1431
HpyCH4V TGCA 8 cut(s) 121, 259, 337, 764, 794, 1051, 1214, 1233
HpyF10VI GCNNNNNNNGC 6 cut(s) 782, 791, 878, 887, 1019, 1250
HpyF3I CTNAG 2 cut(s) 1014, 1116
HpySE526I ACGT 3 cut(s) 54, 523, 1431
Hsp92I GRCGYC 1 cut(s) 673
Hsp92II CATG 9 cut(s) 341, 421, 593, 611, 803, 827, 1060, 1192, 1262
Ksp22I TGATCA 2 cut(s) 387, 1191
KspAI GTTAAC 1 cut(s) 223
LguI GCTCTTC 1 cut(s) 1449
LmnI GCTCC 3 cut(s) 644, 1019, 1262
Lsp1109I GCAGC 2 cut(s) 806, 1226
LweI GCATC 3 cut(s) 34, 656, 1060
MaeI CTAG 2 cut(s) 498, 1475
MaeII ACGT 3 cut(s) 54, 523, 1431
MaeIII GTNAC 3 cut(s) 50, 349, 427
MboII GAAGA 9 cut(s) 34, 74, 89, 583, 1025, 1320, 1386, 1466, 1505
MflI RGATCY 3 cut(s) 743, 1030, 1177
MhlI GDGCHC 4 cut(s) 261, 371, 378, 1384
MluCI AATT 5 cut(s) 396, 600, 618, 666, 1486
MlyI GAGTC 3 cut(s) 932, 972, 1380
MmeI TCCRAC 1 cut(s) 1487
MroXI GAANNNNTTC 1 cut(s) 1312
MseI TTAA 4 cut(s) 222, 603, 1161, 1329
MslI CAYNNNNRTG 4 cut(s) 420, 522, 594, 872
MspA1I CMGCKG 2 cut(s) 861, 1217
MspI CCGG 3 cut(s) 12, 48, 731
MspR9I CCNGG 3 cut(s) 372, 433, 1206
Mva1269I GAATGC 1 cut(s) 585
MvaI CCWGG 3 cut(s) 372, 433, 1206
MwoI GCNNNNNNNGC 6 cut(s) 782, 791, 878, 887, 1019, 1250
NdeI CATATG 2 cut(s) 788, 996
NlaIII CATG 9 cut(s) 341, 421, 593, 611, 803, 827, 1060, 1192, 1262
NmeAIII GCCGAG 1 cut(s) 1434
NmuCI GTSAC 2 cut(s) 349, 427
NspI RCATGY 2 cut(s) 341, 421
OliI CACNNNNGTG 1 cut(s) 522
PaeI GCATGC 1 cut(s) 341
PagI TCATGA 1 cut(s) 589
PasI CCCWGGG 1 cut(s) 371
PciI ACATGT 1 cut(s) 417
PciSI GCTCTTC 1 cut(s) 1449
PcsI WCGNNNNNNNCGW 1 cut(s) 39
PctI GAATGC 1 cut(s) 585
PdmI GAANNNNTTC 1 cut(s) 1312
PfeI GAWTC 2 cut(s) 199, 916
PflFI GACNNNGTC 1 cut(s) 1223
PflMI CCANNNNNTGG 1 cut(s) 1450
PinAI ACCGGT 1 cut(s) 730
PkrI GCNGC 2 cut(s) 796, 1216
PleI GAGTC 3 cut(s) 931, 972, 1380
PpsI GAGTC 3 cut(s) 931, 972, 1380
PscI ACATGT 1 cut(s) 417
PshBI ATTAAT 1 cut(s) 1161
Psp6I CCWGG 3 cut(s) 370, 431, 1204
PspFI CCCAGC 1 cut(s) 777
PspGI CCWGG 3 cut(s) 370, 431, 1204
PspPI GGNCC 3 cut(s) 299, 775, 1295
PstI CTGCAG 1 cut(s) 766
PsuI RGATCY 3 cut(s) 743, 1030, 1177
PsyI GACNNNGTC 1 cut(s) 1223
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 3 cut(s) 152, 532, 1505
RsaNI GTAC 3 cut(s) 151, 531, 1504
RseI CAYNNNNRTG 4 cut(s) 420, 522, 594, 872
SapI GCTCTTC 1 cut(s) 1449
SaqAI TTAA 4 cut(s) 222, 603, 1161, 1329
SatI GCNGC 2 cut(s) 795, 1215
Sau96I GGNCC 3 cut(s) 299, 775, 1295
ScaI AGTACT 1 cut(s) 1505
SchI GAGTC 3 cut(s) 932, 972, 1380
ScrFI CCNGG 3 cut(s) 372, 433, 1206
SduI GDGCHC 4 cut(s) 261, 371, 378, 1384
SfaNI GCATC 3 cut(s) 34, 656, 1060
SfcI CTRYAG 3 cut(s) 141, 762, 856
SinI GGWCC 1 cut(s) 299
SmiMI CAYNNNNRTG 4 cut(s) 420, 522, 594, 872
SphI GCATGC 1 cut(s) 341
Sse9I AATT 5 cut(s) 396, 600, 618, 666, 1486
SsiI CCGC 3 cut(s) 5, 326, 861
SspI AATATT 1 cut(s) 215
SspMI CTAG 2 cut(s) 498, 1475
StyD4I CCNGG 3 cut(s) 370, 431, 1204
StyI CCWWGG 2 cut(s) 497, 538
TaaI ACNGT 3 cut(s) 238, 385, 908
TaiI ACGT 3 cut(s) 57, 526, 1434
TaqI TCGA 3 cut(s) 60, 569, 895
TasI AATT 5 cut(s) 396, 600, 618, 666, 1486
TatI WGTACW 1 cut(s) 1503
TfiI GAWTC 2 cut(s) 199, 916
Tru1I TTAA 4 cut(s) 222, 603, 1161, 1329
Tru9I TTAA 4 cut(s) 222, 603, 1161, 1329
TscAI CASTG 4 cut(s) 123, 241, 390, 1242
TseFI GTSAC 2 cut(s) 349, 427
TseI GCWGC 2 cut(s) 794, 1214
Tsp45I GTSAC 2 cut(s) 349, 427
TspDTI ATGAA 8 cut(s) 41, 345, 578, 856, 955, 1073, 1247, 1452
TspRI CASTG 4 cut(s) 123, 241, 390, 1242
Tth111I GACNNNGTC 1 cut(s) 1223
Van91I CCANNNNNTGG 1 cut(s) 1450
VneI GTGCAC 1 cut(s) 257
VpaK11BI GGWCC 1 cut(s) 299
VspI ATTAAT 1 cut(s) 1161
XceI RCATGY 2 cut(s) 341, 421
XcmI CCANNNNNNNNNTGG 2 cut(s) 524, 898
XmaJI CCTAGG 1 cut(s) 497
XmiI GTMKAC 1 cut(s) 1227
XmnI GAANNNNTTC 1 cut(s) 1312
XspI CTAG 2 cut(s) 498, 1475
ZrmI AGTACT 1 cut(s) 1505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.