Prenyltransferase and squalene oxidase repeat
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Prenyltrans | PF00432 | 54 - 189 | 9.4e-08 | Prenyltransferase alpha-alpha toroid domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 684 |
| Acc36I | ACCTGC | 1 cut(s) | 684 |
| AccB1I | GGYRCC | 1 cut(s) | 43 |
| AccBSI | CCGCTC | 1 cut(s) | 49 |
| AciI | CCGC | 8 cut(s) | 47, 56, 662, 687, 718, 721, 724, 746 |
| AclWI | GGATC | 5 cut(s) | 65, 532, 746, 803, 941 |
| AcoI | YGGCCR | 3 cut(s) | 609, 652, 773 |
| AcuI | CTGAAG | 2 cut(s) | 365, 399 |
| AcyI | GRCGYC | 2 cut(s) | 44, 789 |
| AfaI | GTAC | 2 cut(s) | 420, 442 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 99 |
| AflIII | ACRYGT | 3 cut(s) | 175, 540, 560 |
| AgeI | ACCGGT | 1 cut(s) | 698 |
| AgsI | TTSAA | 6 cut(s) | 359, 400, 428, 493, 534, 923 |
| AjiI | CACGTC | 1 cut(s) | 563 |
| AjnI | CCWGG | 1 cut(s) | 689 |
| AleI | CACNNNNGTG | 1 cut(s) | 822 |
| AluBI | AGCT | 7 cut(s) | 16, 99, 123, 160, 295, 486, 503 |
| AluI | AGCT | 7 cut(s) | 16, 99, 123, 160, 295, 486, 503 |
| Alw21I | GWGCWC | 1 cut(s) | 488 |
| AlwI | GGATC | 5 cut(s) | 65, 532, 746, 803, 941 |
| AoxI | GGCC | 6 cut(s) | 324, 609, 652, 747, 773, 804 |
| ApeKI | GCWGC | 1 cut(s) | 508 |
| AsiGI | ACCGGT | 1 cut(s) | 698 |
| AspLEI | GCGC | 1 cut(s) | 46 |
| AspS9I | GGNCC | 2 cut(s) | 748, 804 |
| AsuC2I | CCSGG | 6 cut(s) | 75, 84, 608, 622, 752, 772 |
| AsuHPI | GGTGA | 4 cut(s) | 89, 445, 560, 836 |
| AsuII | TTCGAA | 1 cut(s) | 19 |
| BanI | GGYRCC | 1 cut(s) | 43 |
| BanII | GRGCYC | 2 cut(s) | 90, 488 |
| BauI | CACGAG | 1 cut(s) | 50 |
| BbsI | GAAGAC | 1 cut(s) | 592 |
| Bbv12I | GWGCWC | 1 cut(s) | 488 |
| BbvI | GCAGC | 1 cut(s) | 495 |
| BccI | CCATC | 4 cut(s) | 145, 226, 515, 636 |
| BciT130I | CCWGG | 1 cut(s) | 691 |
| BciVI | GTATCC | 1 cut(s) | 386 |
| BcnI | CCSGG | 6 cut(s) | 75, 84, 608, 622, 752, 772 |
| BfaI | CTAG | 1 cut(s) | 444 |
| BfoI | RGCGCY | 1 cut(s) | 47 |
| BfuAI | ACCTGC | 1 cut(s) | 684 |
| BfuI | GTATCC | 1 cut(s) | 386 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 692 |
| BglII | AGATCT | 1 cut(s) | 410 |
| BisI | GCNGC | 7 cut(s) | 47, 57, 509, 687, 721, 724, 747 |
| BlsI | GCNGC | 7 cut(s) | 48, 58, 510, 688, 722, 725, 748 |
| Bme1390I | CCNGG | 7 cut(s) | 75, 84, 608, 622, 691, 752, 772 |
| BmgBI | CACGTC | 1 cut(s) | 563 |
| BmgT120I | GGNCC | 2 cut(s) | 748, 804 |
| BmiI | GGNNCC | 4 cut(s) | 45, 626, 685, 750 |
| BmrFI | CCNGG | 7 cut(s) | 75, 84, 608, 622, 691, 752, 772 |
| BmrI | ACTGGG | 1 cut(s) | 271 |
| BmsI | GCATC | 1 cut(s) | 173 |
| BmuI | ACTGGG | 1 cut(s) | 271 |
| BpiI | GAAGAC | 1 cut(s) | 592 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 197, 229 |
| BpmI | CTGGAG | 1 cut(s) | 624 |
| Bpu14I | TTCGAA | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 1 cut(s) | 388 |
| BpuMI | CCSGG | 6 cut(s) | 75, 84, 608, 622, 752, 772 |
| BsaBI | GATNNNNATC | 1 cut(s) | 69 |
| BsaHI | GRCGYC | 2 cut(s) | 44, 789 |
| BsaJI | CCNNGG | 4 cut(s) | 83, 690, 750, 820 |
| BsaWI | WCCGGW | 2 cut(s) | 698, 930 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 650, 680 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 99 |
| Bse118I | RCCGGY | 2 cut(s) | 698, 791 |
| Bse1I | ACTGG | 1 cut(s) | 266 |
| Bse8I | GATNNNNATC | 1 cut(s) | 69 |
| BseBI | CCWGG | 1 cut(s) | 691 |
| BseDI | CCNNGG | 4 cut(s) | 83, 690, 750, 820 |
| BseGI | GGATG | 5 cut(s) | 313, 358, 502, 760, 846 |
| BseJI | GATNNNNATC | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 99 |
| BseMII | CTCAG | 1 cut(s) | 182 |
| BseNI | ACTGG | 1 cut(s) | 266 |
| BseRI | GAGGAG | 3 cut(s) | 579, 821, 824 |
| BseX3I | CGGCCG | 2 cut(s) | 609, 773 |
| BseXI | GCAGC | 1 cut(s) | 495 |
| BseYI | CCCAGC | 2 cut(s) | 12, 503 |
| BsgI | GTGCAG | 1 cut(s) | 662 |
| Bsh1285I | CGRYCG | 5 cut(s) | 612, 699, 776, 931, 944 |
| BshFI | GGCC | 6 cut(s) | 326, 611, 654, 749, 775, 806 |
| BshNI | GGYRCC | 1 cut(s) | 43 |
| BshTI | ACCGGT | 1 cut(s) | 698 |
| BsiEI | CGRYCG | 5 cut(s) | 612, 699, 776, 931, 944 |
| BsiHKAI | GWGCWC | 1 cut(s) | 488 |
| BslFI | GGGAC | 2 cut(s) | 549, 551 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 99 |
| BsmFI | GGGAC | 2 cut(s) | 549, 551 |
| BsnI | GGCC | 6 cut(s) | 326, 611, 654, 749, 775, 806 |
| Bsp119I | TTCGAA | 1 cut(s) | 19 |
| Bsp1286I | GDGCHC | 2 cut(s) | 90, 488 |
| Bsp19I | CCATGG | 1 cut(s) | 820 |
| BspACI | CCGC | 8 cut(s) | 47, 56, 662, 687, 718, 721, 724, 746 |
| BspANI | GGCC | 6 cut(s) | 326, 611, 654, 749, 775, 806 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspLI | GGNNCC | 4 cut(s) | 45, 626, 685, 750 |
| BspMI | ACCTGC | 1 cut(s) | 684 |
| BspPI | GGATC | 5 cut(s) | 65, 532, 746, 803, 941 |
| BspT104I | TTCGAA | 1 cut(s) | 19 |
| BspT107I | GGYRCC | 1 cut(s) | 43 |
| BsrBI | CCGCTC | 1 cut(s) | 49 |
| BsrFI | RCCGGY | 2 cut(s) | 698, 791 |
| BsrI | ACTGG | 1 cut(s) | 266 |
| BssAI | RCCGGY | 2 cut(s) | 698, 791 |
| BssECI | CCNNGG | 4 cut(s) | 83, 690, 750, 820 |
| BssNI | GRCGYC | 2 cut(s) | 44, 789 |
| BssSI | CACGAG | 1 cut(s) | 50 |
| BssT1I | CCWWGG | 1 cut(s) | 820 |
| Bst2BI | CACGAG | 1 cut(s) | 50 |
| Bst2UI | CCWGG | 1 cut(s) | 691 |
| Bst4CI | ACNGT | 3 cut(s) | 304, 913, 945 |
| BstACI | GRCGYC | 2 cut(s) | 44, 789 |
| BstBI | TTCGAA | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 3 cut(s) | 90, 162, 793 |
| BstDEI | CTNAG | 1 cut(s) | 168 |
| BstDSI | CCRYGG | 1 cut(s) | 820 |
| BstF5I | GGATG | 5 cut(s) | 313, 358, 502, 760, 846 |
| BstH2I | RGCGCY | 1 cut(s) | 47 |
| BstHHI | GCGC | 1 cut(s) | 46 |
| BstMCI | CGRYCG | 5 cut(s) | 612, 699, 776, 931, 944 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 692, 732, 797, 862 |
| BstNI | CCWGG | 1 cut(s) | 691 |
| BstNSI | RCATGY | 2 cut(s) | 179, 544 |
| BstSCI | CCNGG | 7 cut(s) | 73, 82, 606, 620, 689, 750, 770 |
| BstV1I | GCAGC | 1 cut(s) | 495 |
| BstV2I | GAAGAC | 1 cut(s) | 592 |
| BstX2I | RGATCY | 1 cut(s) | 410 |
| BstYI | RGATCY | 1 cut(s) | 410 |
| BstZI | CGGCCG | 2 cut(s) | 609, 773 |
| BsuI | GTATCC | 1 cut(s) | 386 |
| BsuRI | GGCC | 6 cut(s) | 326, 611, 654, 749, 775, 806 |
| BtgI | CCRYGG | 1 cut(s) | 820 |
| BtrI | CACGTC | 1 cut(s) | 563 |
| BtsCI | GGATG | 5 cut(s) | 313, 358, 502, 760, 846 |
| BveI | ACCTGC | 1 cut(s) | 684 |
| Cac8I | GCNNGC | 3 cut(s) | 90, 162, 793 |
| CfoI | GCGC | 1 cut(s) | 46 |
| Cfr10I | RCCGGY | 2 cut(s) | 698, 791 |
| Cfr13I | GGNCC | 2 cut(s) | 748, 804 |
| CseI | GACGC | 1 cut(s) | 797 |
| Csp6I | GTAC | 2 cut(s) | 419, 441 |
| CspAI | ACCGGT | 1 cut(s) | 698 |
| CviAII | CATG | 5 cut(s) | 176, 541, 801, 821, 853 |
| CviQI | GTAC | 2 cut(s) | 419, 441 |
| DdeI | CTNAG | 1 cut(s) | 168 |
| DinI | GGCGCC | 1 cut(s) | 45 |
| DraI | TTTAAA | 1 cut(s) | 144 |
| EaeI | YGGCCR | 3 cut(s) | 609, 652, 773 |
| EagI | CGGCCG | 2 cut(s) | 609, 773 |
| EciI | GGCGGA | 1 cut(s) | 707 |
| Ecl136II | GAGCTC | 1 cut(s) | 486 |
| EclXI | CGGCCG | 2 cut(s) | 609, 773 |
| Eco130I | CCWWGG | 1 cut(s) | 820 |
| Eco24I | GRGCYC | 2 cut(s) | 90, 488 |
| Eco32I | GATATC | 1 cut(s) | 388 |
| Eco52I | CGGCCG | 2 cut(s) | 609, 773 |
| Eco53kI | GAGCTC | 1 cut(s) | 486 |
| Eco57I | CTGAAG | 2 cut(s) | 365, 399 |
| EcoICRI | GAGCTC | 1 cut(s) | 486 |
| EcoRII | CCWGG | 1 cut(s) | 689 |
| EcoRV | GATATC | 1 cut(s) | 388 |
| EcoT14I | CCWWGG | 1 cut(s) | 820 |
| EcoT38I | GRGCYC | 2 cut(s) | 90, 488 |
| EgeI | GGCGCC | 1 cut(s) | 45 |
| EheI | GGCGCC | 1 cut(s) | 45 |
| ErhI | CCWWGG | 1 cut(s) | 820 |
| FaeI | CATG | 5 cut(s) | 179, 544, 804, 824, 856 |
| FaiI | YATR | 9 cut(s) | 126, 177, 219, 240, 242, 542, 802, 822, 854 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 397, 429 |
| FaqI | GGGAC | 2 cut(s) | 549, 551 |
| FatI | CATG | 5 cut(s) | 175, 540, 800, 820, 852 |
| FauI | CCCGC | 1 cut(s) | 669 |
| Fnu4HI | GCNGC | 7 cut(s) | 47, 57, 509, 687, 721, 724, 747 |
| FokI | GGATG | 5 cut(s) | 320, 365, 509, 767, 833 |
| FriOI | GRGCYC | 2 cut(s) | 90, 488 |
| Fsp4HI | GCNGC | 7 cut(s) | 47, 57, 509, 687, 721, 724, 747 |
| FspBI | CTAG | 1 cut(s) | 444 |
| GlaI | GCGC | 1 cut(s) | 45 |
| GluI | GCNGC | 7 cut(s) | 47, 57, 509, 687, 721, 724, 747 |
| GsaI | CCCAGC | 2 cut(s) | 16, 507 |
| GsuI | CTGGAG | 1 cut(s) | 624 |
| HaeII | RGCGCY | 1 cut(s) | 47 |
| HaeIII | GGCC | 6 cut(s) | 326, 611, 654, 749, 775, 806 |
| HgaI | GACGC | 1 cut(s) | 797 |
| HhaI | GCGC | 1 cut(s) | 46 |
| Hin1I | GRCGYC | 2 cut(s) | 44, 789 |
| Hin1II | CATG | 5 cut(s) | 179, 544, 804, 824, 856 |
| Hin6I | GCGC | 1 cut(s) | 44 |
| HinP1I | GCGC | 1 cut(s) | 44 |
| HindIII | AAGCTT | 1 cut(s) | 293 |
| HinfI | GANTC | 4 cut(s) | 212, 221, 274, 923 |
| HphI | GGTGA | 4 cut(s) | 89, 445, 560, 836 |
| Hpy188I | TCNGA | 5 cut(s) | 171, 483, 571, 928, 938 |
| Hpy188III | TCNNGA | 3 cut(s) | 68, 278, 383 |
| HpyAV | CCTTC | 5 cut(s) | 15, 202, 389, 487, 822 |
| HpyCH4III | ACNGT | 3 cut(s) | 304, 913, 945 |
| HpyCH4IV | ACGT | 2 cut(s) | 562, 597 |
| HpyCH4V | TGCA | 6 cut(s) | 128, 136, 368, 511, 679, 800 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 692, 732, 797, 862 |
| HpyF3I | CTNAG | 1 cut(s) | 168 |
| HpySE526I | ACGT | 2 cut(s) | 562, 597 |
| Hsp92I | GRCGYC | 2 cut(s) | 44, 789 |
| Hsp92II | CATG | 5 cut(s) | 179, 544, 804, 824, 856 |
| HspAI | GCGC | 1 cut(s) | 44 |
| KasI | GGCGCC | 1 cut(s) | 43 |
| KroI | GCCGGC | 1 cut(s) | 791 |
| KroNI | GCCGGC | 1 cut(s) | 793 |
| LmnI | GCTCC | 6 cut(s) | 157, 235, 630, 683, 720, 884 |
| Lsp1109I | GCAGC | 1 cut(s) | 495 |
| LweI | GCATC | 1 cut(s) | 173 |
| MaeI | CTAG | 1 cut(s) | 444 |
| MaeII | ACGT | 2 cut(s) | 562, 597 |
| MbiI | CCGCTC | 1 cut(s) | 49 |
| MboII | GAAGA | 5 cut(s) | 275, 405, 530, 592, 623 |
| MfeI | CAATTG | 1 cut(s) | 428 |
| MflI | RGATCY | 1 cut(s) | 410 |
| MhlI | GDGCHC | 2 cut(s) | 90, 488 |
| MluCI | AATT | 3 cut(s) | 7, 146, 428 |
| Mly113I | GGCGCC | 1 cut(s) | 44 |
| MlyI | GAGTC | 3 cut(s) | 206, 230, 268 |
| MreI | CGCCGGCG | 1 cut(s) | 791 |
| MroNI | GCCGGC | 1 cut(s) | 791 |
| MseI | TTAA | 2 cut(s) | 143, 902 |
| MslI | CAYNNNNRTG | 2 cut(s) | 822, 851 |
| MspR9I | CCNGG | 7 cut(s) | 75, 84, 608, 622, 691, 752, 772 |
| MunI | CAATTG | 1 cut(s) | 428 |
| MvaI | CCWGG | 1 cut(s) | 691 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 692, 732, 797, 862 |
| NaeI | GCCGGC | 1 cut(s) | 793 |
| NarI | GGCGCC | 1 cut(s) | 44 |
| NciI | CCSGG | 6 cut(s) | 75, 84, 608, 622, 752, 772 |
| NcoI | CCATGG | 1 cut(s) | 820 |
| NgoMIV | GCCGGC | 1 cut(s) | 791 |
| NlaIII | CATG | 5 cut(s) | 179, 544, 804, 824, 856 |
| NlaIV | GGNNCC | 4 cut(s) | 45, 626, 685, 750 |
| NspI | RCATGY | 2 cut(s) | 179, 544 |
| NspV | TTCGAA | 1 cut(s) | 19 |
| OliI | CACNNNNGTG | 1 cut(s) | 822 |
| PaqCI | CACCTGC | 1 cut(s) | 684 |
| PciI | ACATGT | 2 cut(s) | 175, 540 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 609 |
| PdiI | GCCGGC | 1 cut(s) | 793 |
| PfeI | GAWTC | 1 cut(s) | 923 |
| PinAI | ACCGGT | 1 cut(s) | 698 |
| PkrI | GCNGC | 7 cut(s) | 48, 58, 510, 688, 722, 725, 748 |
| PleI | GAGTC | 3 cut(s) | 206, 229, 268 |
| PluTI | GGCGCC | 1 cut(s) | 47 |
| PpsI | GAGTC | 3 cut(s) | 206, 229, 268 |
| PscI | ACATGT | 2 cut(s) | 175, 540 |
| Psp124BI | GAGCTC | 1 cut(s) | 488 |
| Psp6I | CCWGG | 1 cut(s) | 689 |
| PspFI | CCCAGC | 2 cut(s) | 12, 503 |
| PspGI | CCWGG | 1 cut(s) | 689 |
| PspN4I | GGNNCC | 4 cut(s) | 45, 626, 685, 750 |
| PspPI | GGNCC | 2 cut(s) | 748, 804 |
| PsuI | RGATCY | 1 cut(s) | 410 |
| RsaI | GTAC | 2 cut(s) | 420, 442 |
| RsaNI | GTAC | 2 cut(s) | 419, 441 |
| RseI | CAYNNNNRTG | 2 cut(s) | 822, 851 |
| SacI | GAGCTC | 1 cut(s) | 488 |
| SaqAI | TTAA | 2 cut(s) | 143, 902 |
| SatI | GCNGC | 7 cut(s) | 47, 57, 509, 687, 721, 724, 747 |
| Sau96I | GGNCC | 2 cut(s) | 748, 804 |
| SchI | GAGTC | 3 cut(s) | 206, 230, 268 |
| ScrFI | CCNGG | 7 cut(s) | 75, 84, 608, 622, 691, 752, 772 |
| SduI | GDGCHC | 2 cut(s) | 90, 488 |
| SfaNI | GCATC | 1 cut(s) | 173 |
| SfoI | GGCGCC | 1 cut(s) | 45 |
| SfuI | TTCGAA | 1 cut(s) | 19 |
| SgrAI | CRCCGGYG | 1 cut(s) | 791 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 822, 851 |
| SmlI | CTYRAG | 1 cut(s) | 403 |
| SmoI | CTYRAG | 1 cut(s) | 403 |
| Sse9I | AATT | 3 cut(s) | 7, 146, 428 |
| SsiI | CCGC | 8 cut(s) | 47, 56, 662, 687, 718, 721, 724, 746 |
| SspDI | GGCGCC | 1 cut(s) | 43 |
| SspMI | CTAG | 1 cut(s) | 444 |
| SstI | GAGCTC | 1 cut(s) | 488 |
| StyD4I | CCNGG | 7 cut(s) | 73, 82, 606, 620, 689, 750, 770 |
| StyI | CCWWGG | 1 cut(s) | 820 |
| TaaI | ACNGT | 3 cut(s) | 304, 913, 945 |
| TaiI | ACGT | 2 cut(s) | 565, 600 |
| TaqI | TCGA | 4 cut(s) | 19, 181, 603, 741 |
| TasI | AATT | 3 cut(s) | 7, 146, 428 |
| TauI | GCSGC | 6 cut(s) | 49, 59, 689, 723, 726, 749 |
| TfiI | GAWTC | 1 cut(s) | 923 |
| Tru1I | TTAA | 2 cut(s) | 143, 902 |
| Tru9I | TTAA | 2 cut(s) | 143, 902 |
| TseI | GCWGC | 1 cut(s) | 508 |
| TspDTI | ATGAA | 2 cut(s) | 263, 531 |
| TspGWI | ACGGA | 3 cut(s) | 107, 568, 696 |
| XceI | RCATGY | 2 cut(s) | 179, 544 |
| XspI | CTAG | 1 cut(s) | 444 |