Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000823

Physical Location & Seq

Genomic Coordinates Reverse (-)

38138565 .. 38143698

Gene Structure 5134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0329400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGAACACAGTTTAGGTCAAGACTCTATTCCTGGTTTTGGGTCATTTGATAAGTCTAGGGTTTTGGATGTAAGGCCTTTGAGGCGTCTTGTTCCTGTATTCCCCTCACCTTCTAGTAATTCTTCATTTTCGACACCCCAAGGTGCTGCTCCTTTTGTTTGTGCTTCTCCTGCTGGTCCTTTCCCACCTGGGGTTTCCCCATTTTTCCCCTTTTTCATTTCATCAGAGTCTCAAAGGCCGCTCGAACAAAATCTACAAACACCAAGTGGTATACCCAATGAGAATCAACCGTTTGGCTTCAGTAATCCAATATCTAATGCAGTTCCAATAAATTCCTTTAGGAATCCTCCTCCACCCTCAACCCCCAACCAGAGTACAGGAACTTCGAATGGAGGAGATACTACACCTTCGAGAAAGATTACTAGAAGTCGTGTCCAACCACAACCGCAACGTGGGGCTGCGGAGGAAGATGGTTTTAGCGAGAGCGTTGTTGATGCAGGAAATACAAGGAAAGTCGGGAGGCCAAAGGGTAAGTTCCAGTCTCAAAAGAGGACACGGGGTGGCCAGGACATTAATGTTGCCTTGCCTGATGTCGACATTGATGCAATAGTTGATAATGTTCTCACCACATATACTAATACCTTGAGACAAACTGATGGCAACAAGGAATCAGTTGGATATGTACTCGTGTGTTATGATCTGCTACGAAGAAAGATTTCACAAATTGAAGAGATGAAGGAAGGGATACCAGGAGTGTCGAGAACAGGACGCTCTGATCTAAGGGCTGGAACTCTCTTCATGAATAAGGGAATTAGGACAAATGCCCAAAAGAGGATTGGTACAGTGCCCGGTGTTGACGTTGGGGATATTTTCTTTTTCCGAATGGAATTGTGCTTGGTTGGATTACACGCTCCAACTATGGGCGGGATTGATTATATGGGAGTCAAGAACAGTTCAGAGGAAGAGCCCTTAGCATTGAGCATTGTTTCTTCTGGAGGGTATGAGGATCATATACAGGATGGGAATGAGTTGATATATAGTGGCCAAGGTGGCAATGCCGGCAACGATAACAGGAAAGATAAGGAAACAAAGGATCAGAAGCTTGAAAGGGGTAATCTAGCTTTGGAGAAAAGTTTGCATCGGGGTAATGATGTAAGAGTAATTCGGGGTATTAAGGATGTTTCTAATCCAACTGGGAAGGTATATGTCTATGACGGTCTATACAAAATCCATGAATCATGGGTAGATAAAGGAAAGAGTGGTGGCAATGTATTCAAGTACAGATTGGTAAGATTACCTGGACAGCCTGAAGCGTTTACAGTATGGAAATCAATTGAGCAATGGAAAGAAACAAATACTACAAGGGTTGGATTGATATTGCCAGATCTTACTTCAGGGGCAGAAACTTTTCCCGTTTCTCTTGTAAATGACGTAGATGGCGAGAAAGGCCCTGCACACTTCACATATATTCCTAGTCTTAAGTATTCAAAACCTGTTAATCTTACAGAACCTACTGCTGGGTGTAATTGTACTGGTGGATGTCTCCCTGGTAATTCCAACTGCCCTTGCATTCAGAAAAATGGAGGTTATCTCCCATATACTGCAAATGGGCTTCTTGTGAACCAAAAATCCTTATTACATGAATGTGGTCCTTCCTGCACATGCCCTCCTAATTGTCGTAATCGTGTGTCCCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAGACTAAGGATAAAGGTTGGGGTTTGAGGTCCTGGGATCCCATCCGTGCTGGTGCTTTCTTATGCGAGTATGCAGGGGAAGCTCTAAATGTTTCTGGTATAGGAAAGCTTGGGGATGACCGTGCAGATGATTACAGTTTTGATGCTAATCGTACTTGTCAGCCACTGGGAGTTCTGCCTGGTGATTCTAATGAGACTCCAAATGTCCCTTTTCCTCTACTTATAAGTGCAAATACTGCTGGAAATGTTGCTCGCTTTATGAATCACAGCTGTTCTCCAAATGTGTTCTGGCAACCAATTTTACGTGAAAATAAAAATGAATCTGATTTACATGTTGCATTTTATGCGGTTGGACACATTCCTCCTATGACAGAGTTGACTTATGATTATGGGATGATCCCTTATGAGAAAGCATACCAGAGGAAGAAAATATGCCTTTGTGGGTCAATAAAGTGTAGAAGCTTCTTTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015935 GO:0019538 GO:0022626 GO:0022627 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 ko03010 map00520 map01100 map03010

Pfam Domains

Protein Families

Ribosomal_S10

Protein Analysis

732

Amino Acids

79.93

Weight (kDa)

8.49

Isoelectric Point (pI)

43.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	278 - 435	9.5e-55	SAD/SRA domain
Pre-SET	PF05033	465 - 562	2.7e-23	Pre-SET motif
SET	PF00856	581 - 706	8.9e-17	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45030 AT3G47370 AT3G47370 AT3G47370 AT5G62300 AT5G62300
fragaria_vesca	FvH4_4g30020 FvH4_7g28020 FvH4_7g28020 FvH4_7g28020
malus_domestica	MD01G1184700.v1.1 MD07G1256900.v1.1
prunus_persica	Prupe.1G120500_v2.0.a1 Prupe.1G287000_v2.0.a1 Prupe.2G281000_v2.0.a1 Prupe.2G281100_v2.0.a1 Prupe.5G012000_v2.0.a1 Prupe.5G059500_v2.0.a1
pyrus_communis	pycom01g19640 pycom07g22980
rosa_chinensis	RchiOBHm_Chr1g0318011 RchiOBHm_Chr1g0324851 RchiOBHm_Chr1g0350101 RchiOBHm_Chr1g0374951 RchiOBHm_Chr4g0396241 RchiOBHm_Chr4g0438311
rosa_laevigata	RLG00000006371 RLG00000010263 RLG00000018308 RLG00000026704
rosa_multiflora	Rmu_sc0001225.1_g000007 Rmu_sc0002962.1_g000010 Rmu_sc0011129.1_g000002
rosa_roxburghii	Rroxscaffold_2G00109290 Rroxscaffold_2G00154010 Rroxscaffold_4G00283150 Rroxscaffold_4G00305070 Rroxscaffold_5G00379400
rosa_rugosa	Rorug01G0386300 Rorug03G0329000 Rorug03G0329100 Rorug03G0329200 Rorug03G0329200 Rorug03G0329300 Rorug03G0329400 Rorug03G0329500 Rorug04G0308900 Rorug06G0060300
rosa_samantha	Rh1BG361500 Rh1CG375100 Rh1CG421700 Rh1DG392500 Rh2AG274500 Rh2AG496700 Rh2CG292500 Rh2CG482700 Rh4AG360000 Rh4BG371000 Rh4DG365900 Rh5AG175200 Rh5CG471800
rosa_wichuraiana	Rw0G006460 Rw0G016400 Rw1G035270 Rw5G003840 Rw5G025040 Rw6G009770 Rw6G017420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1949
AccBSI	CCGCTC	1 cut(s)	241
AccI	GTMKAC	2 cut(s)	271, 594
AciI	CCGC	5 cut(s)	239, 446, 461, 924, 2072
AclWI	GGATC	5 cut(s)	1014, 1101, 1757, 1770, 2116
AcoI	YGGCCR	2 cut(s)	562, 1042
AcsI	RAATTY	2 cut(s)	331, 1707
AcuI	CTGAAG	3 cut(s)	283, 1329, 1377
AcyI	GRCGYC	1 cut(s)	85
AdeI	CACNNNGTG	2 cut(s)	266, 560
AfaI	GTAC	6 cut(s)	376, 684, 841, 1280, 1531, 1879
AfiI	CCNNNNNNNGG	6 cut(s)	38, 190, 452, 831, 920, 1517
AflII	CTTAAG	1 cut(s)	1478
AflIII	ACRYGT	1 cut(s)	2056
AgsI	TTSAA	5 cut(s)	728, 1106, 1276, 1488, 1705
AjnI	CCWGG	8 cut(s)	31, 187, 564, 748, 1297, 1546, 1757, 1903
AjuI	GAANNNNNNNTTGG	2 cut(s)	1697, 1729
AloI	GAACNNNNNNTCC	2 cut(s)	1613, 1645
AluBI	AGCT	6 cut(s)	1102, 1121, 1808, 1834, 1995, 2187
AluI	AGCT	6 cut(s)	1102, 1121, 1808, 1834, 1995, 2187
Alw26I	GTCTC	5 cut(s)	234, 546, 640, 1547, 1913
AlwI	GGATC	5 cut(s)	1014, 1101, 1757, 1770, 2116
AlwNI	CAGNNNCTG	1 cut(s)	1891
AoxI	GGCC	6 cut(s)	74, 236, 521, 562, 1042, 1447
ApeKI	GCWGC	2 cut(s)	146, 458
ApoI	RAATTY	2 cut(s)	331, 1707
AseI	ATTAAT	1 cut(s)	573
Asp700I	GAANNNNTTC	2 cut(s)	715, 1407
AspS9I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
AsuC2I	CCSGG	1 cut(s)	849
AsuHPI	GGTGA	3 cut(s)	99, 616, 1919
AsuII	TTCGAA	1 cut(s)	386
AvaII	GGWCC	3 cut(s)	176, 1649, 1755
BaeGI	GKGCMC	1 cut(s)	849
BalI	TGGCCA	2 cut(s)	564, 1044
BamHI	GGATCC	1 cut(s)	1762
BanII	GRGCYC	1 cut(s)	969
BarI	GAAGNNNNNNTAC	2 cut(s)	367, 399
BauI	CACGAG	1 cut(s)	686
BbvI	GCAGC	2 cut(s)	133, 445
BccI	CCATC	5 cut(s)	464, 650, 1013, 1430, 1775
BcgI	CGANNNNNNTGC	2 cut(s)	584, 618
BciT130I	CCWGG	8 cut(s)	33, 189, 566, 750, 1299, 1548, 1759, 1905
BciVI	GTATCC	1 cut(s)	738
BcnI	CCSGG	1 cut(s)	849
BcoDI	GTCTC	5 cut(s)	234, 546, 640, 1547, 1913
BfaI	CTAG	5 cut(s)	57, 114, 423, 1118, 1473
BfrI	CTTAAG	1 cut(s)	1478
BfuI	GTATCC	1 cut(s)	738
BglI	GCCNNNNNGGC	2 cut(s)	82, 1050
BglII	AGATCT	1 cut(s)	1384
BisI	GCNGC	3 cut(s)	147, 239, 459
BlsI	GCNGC	3 cut(s)	148, 240, 460
Bme1390I	CCNGG	9 cut(s)	33, 189, 566, 750, 849, 1299, 1548, 1759, 1905
Bme18I	GGWCC	3 cut(s)	176, 1649, 1755
BmgT120I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
BmiI	GGNNCC	1 cut(s)	1764
BmrFI	CCNGG	9 cut(s)	33, 189, 566, 750, 849, 1299, 1548, 1759, 1905
BmrI	ACTGGG	2 cut(s)	1203, 1901
BmsI	GCATC	4 cut(s)	484, 592, 1147, 1858
BmuI	ACTGGG	2 cut(s)	1203, 1901
BplI	GAGNNNNNCTC	2 cut(s)	1575, 1607
BpmI	CTGGAG	1 cut(s)	1014
Bpu10I	CCTNAGC	1 cut(s)	970
Bpu14I	TTCGAA	1 cut(s)	386
BpuEI	CTTGAG	1 cut(s)	664
BpuMI	CCSGG	1 cut(s)	849
BsaAI	YACGTR	1 cut(s)	2030
BsaBI	GATNNNNATC	1 cut(s)	1872
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	6 cut(s)	139, 188, 1045, 1546, 1693, 1758
BsaXI	ACNNNNNCTCC	2 cut(s)	1651, 1681
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 190, 452, 831, 920, 1517
Bse118I	RCCGGY	1 cut(s)	1058
Bse1I	ACTGG	4 cut(s)	538, 1198, 1537, 1896
Bse3DI	GCAATG	3 cut(s)	1060, 1273, 1346
Bse8I	GATNNNNATC	1 cut(s)	1872
BseBI	CCWGG	8 cut(s)	33, 189, 566, 750, 1299, 1548, 1759, 1905
BseDI	CCNNGG	6 cut(s)	139, 188, 1045, 1546, 1693, 1758
BseGI	GGATG	7 cut(s)	73, 1024, 1183, 1544, 1767, 1846, 2124
BseJI	GATNNNNATC	1 cut(s)	1872
BseLI	CCNNNNNNNGG	6 cut(s)	38, 190, 452, 831, 920, 1517
BseMI	GCAATG	3 cut(s)	1060, 1273, 1346
BseNI	ACTGG	4 cut(s)	538, 1198, 1537, 1896
BseRI	GAGGAG	2 cut(s)	339, 408
BseSI	GKGCMC	1 cut(s)	849
BseXI	GCAGC	2 cut(s)	133, 445
BseYI	CCCAGC	1 cut(s)	1517
BsgI	GTGCAG	3 cut(s)	1437, 1642, 1869
BshFI	GGCC	6 cut(s)	76, 238, 523, 564, 1044, 1449
BsiSI	CCGG	2 cut(s)	849, 1059
BslFI	GGGAC	2 cut(s)	1675, 1916
BslI	CCNNNNNNNGG	6 cut(s)	38, 190, 452, 831, 920, 1517
BsmAI	GTCTC	5 cut(s)	234, 546, 640, 1547, 1913
BsmFI	GGGAC	2 cut(s)	1675, 1916
BsmI	GAATGC	1 cut(s)	1569
BsnI	GGCC	6 cut(s)	76, 238, 523, 564, 1044, 1449
Bsp119I	TTCGAA	1 cut(s)	386
Bsp1286I	GDGCHC	2 cut(s)	849, 969
Bsp143I	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
BspACI	CCGC	5 cut(s)	239, 446, 461, 924, 2072
BspANI	GGCC	6 cut(s)	76, 238, 523, 564, 1044, 1449
BspHI	TCATGA	1 cut(s)	798
BspLI	GGNNCC	1 cut(s)	1764
BspPI	GGATC	5 cut(s)	1014, 1101, 1757, 1770, 2116
BspQI	GCTCTTC	1 cut(s)	957
BspT104I	TTCGAA	1 cut(s)	386
BspTI	CTTAAG	1 cut(s)	1478
BsrBI	CCGCTC	1 cut(s)	241
BsrDI	GCAATG	3 cut(s)	1060, 1273, 1346
BsrFI	RCCGGY	1 cut(s)	1058
BsrI	ACTGG	4 cut(s)	538, 1198, 1537, 1896
BssAI	RCCGGY	1 cut(s)	1058
BssECI	CCNNGG	6 cut(s)	139, 188, 1045, 1546, 1693, 1758
BssMI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
BssNAI	GTATAC	1 cut(s)	272
BssNI	GRCGYC	1 cut(s)	85
BssSI	CACGAG	1 cut(s)	686
BssT1I	CCWWGG	3 cut(s)	139, 1045, 1693
Bst1107I	GTATAC	1 cut(s)	272
Bst2BI	CACGAG	1 cut(s)	686
Bst2UI	CCWGG	8 cut(s)	33, 189, 566, 750, 1299, 1548, 1759, 1905
Bst4CI	ACNGT	8 cut(s)	11, 291, 844, 953, 1217, 1321, 1847, 1862
Bst6I	CTCTTC	3 cut(s)	723, 800, 957
BstACI	GRCGYC	1 cut(s)	85
BstAFI	CTTAAG	1 cut(s)	1478
BstAPI	GCANNNNNTGC	2 cut(s)	1961, 2069
BstBAI	YACGTR	1 cut(s)	2030
BstBI	TTCGAA	1 cut(s)	386
BstC8I	GCNNGC	2 cut(s)	1060, 1978
BstDEI	CTNAG	3 cut(s)	779, 970, 1731
BstF5I	GGATG	7 cut(s)	73, 1024, 1183, 1544, 1767, 1846, 2124
BstKTI	GATC	7 cut(s)	700, 778, 1009, 1096, 1387, 1765, 2124
BstMAI	GTCTC	5 cut(s)	234, 546, 640, 1547, 1913
BstMBI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
BstMWI	GCNNNNNNNGC	8 cut(s)	82, 170, 1050, 1059, 1446, 1805, 1961, 2069
BstNI	CCWGG	8 cut(s)	33, 189, 566, 750, 1299, 1548, 1759, 1905
BstNSI	RCATGY	2 cut(s)	1665, 2060
BstSCI	CCNGG	9 cut(s)	31, 187, 564, 748, 847, 1297, 1546, 1757, 1903
BstSLI	GKGCMC	1 cut(s)	849
BstV1I	GCAGC	2 cut(s)	133, 445
BstX2I	RGATCY	2 cut(s)	1384, 1762
BstYI	RGATCY	2 cut(s)	1384, 1762
BstZ17I	GTATAC	1 cut(s)	272
BsuI	GTATCC	1 cut(s)	738
BsuRI	GGCC	6 cut(s)	76, 238, 523, 564, 1044, 1449
BtsCI	GGATG	7 cut(s)	73, 1024, 1183, 1544, 1767, 1846, 2124
BtsIMutI	CAGTG	2 cut(s)	849, 1889
Cac8I	GCNNGC	2 cut(s)	1060, 1978
CaiI	CAGNNNCTG	1 cut(s)	1891
CciI	TCATGA	1 cut(s)	798
Cfr10I	RCCGGY	1 cut(s)	1058
Cfr13I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
CseI	GACGC	2 cut(s)	74, 777
Csp6I	GTAC	6 cut(s)	375, 683, 840, 1279, 1530, 1878
CviAII	CATG	6 cut(s)	799, 1232, 1239, 1640, 1662, 2057
CviQI	GTAC	6 cut(s)	375, 683, 840, 1279, 1530, 1878
DdeI	CTNAG	3 cut(s)	779, 970, 1731
DpnI	GATC	7 cut(s)	699, 777, 1008, 1095, 1386, 1764, 2123
DpnII	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
DraIII	CACNNNGTG	2 cut(s)	266, 560
EaeI	YGGCCR	2 cut(s)	562, 1042
Eam1104I	CTCTTC	3 cut(s)	723, 800, 957
EarI	CTCTTC	3 cut(s)	723, 800, 957
Eco130I	CCWWGG	3 cut(s)	139, 1045, 1693
Eco147I	AGGCCT	1 cut(s)	76
Eco24I	GRGCYC	1 cut(s)	969
Eco47I	GGWCC	3 cut(s)	176, 1649, 1755
Eco57I	CTGAAG	3 cut(s)	283, 1329, 1377
EcoO109I	RGGNCCY	2 cut(s)	1448, 1755
EcoRII	CCWGG	8 cut(s)	31, 187, 564, 748, 1297, 1546, 1757, 1903
EcoT14I	CCWWGG	3 cut(s)	139, 1045, 1693
EcoT38I	GRGCYC	1 cut(s)	969
ErhI	CCWWGG	3 cut(s)	139, 1045, 1693
FaeI	CATG	6 cut(s)	802, 1235, 1242, 1643, 1665, 2060
FaqI	GGGAC	2 cut(s)	1675, 1916
FatI	CATG	6 cut(s)	798, 1231, 1238, 1639, 1661, 2056
FauI	CCCGC	1 cut(s)	917
FblI	GTMKAC	2 cut(s)	271, 594
Fnu4HI	GCNGC	3 cut(s)	147, 239, 459
FokI	GGATG	7 cut(s)	80, 1031, 1190, 1551, 1754, 1853, 2131
FriOI	GRGCYC	1 cut(s)	969
Fsp4HI	GCNGC	3 cut(s)	147, 239, 459
FspBI	CTAG	5 cut(s)	57, 114, 423, 1118, 1473
GluI	GCNGC	3 cut(s)	147, 239, 459
GsaI	CCCAGC	1 cut(s)	1521
GsuI	CTGGAG	1 cut(s)	1014
HaeIII	GGCC	6 cut(s)	76, 238, 523, 564, 1044, 1449
HapII	CCGG	2 cut(s)	849, 1059
HgaI	GACGC	2 cut(s)	74, 777
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	6 cut(s)	802, 1235, 1242, 1643, 1665, 2060
HincII	GTYRAC	3 cut(s)	595, 856, 2103
HindII	GTYRAC	3 cut(s)	595, 856, 2103
HindIII	AAGCTT	3 cut(s)	1100, 1832, 2185
HpaII	CCGG	2 cut(s)	849, 1059
HphI	GGTGA	3 cut(s)	99, 616, 1919
Hpy166II	GTNNAC	6 cut(s)	272, 595, 856, 1317, 1621, 2103
Hpy188I	TCNGA	7 cut(s)	226, 775, 881, 958, 1098, 1575, 2050
Hpy188III	TCNNGA	7 cut(s)	20, 411, 517, 759, 799, 946, 993
Hpy8I	GTNNAC	6 cut(s)	272, 595, 856, 1317, 1621, 2103
HpyAV	CCTTC	6 cut(s)	120, 417, 730, 734, 1192, 1662
HpyCH4III	ACNGT	8 cut(s)	11, 291, 844, 953, 1217, 1321, 1847, 1862
HpyCH4IV	ACGT	4 cut(s)	451, 858, 1431, 2029
HpyF10VI	GCNNNNNNNGC	8 cut(s)	82, 170, 1050, 1059, 1446, 1805, 1961, 2069
HpyF3I	CTNAG	3 cut(s)	779, 970, 1731
HpySE526I	ACGT	4 cut(s)	451, 858, 1431, 2029
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	6 cut(s)	802, 1235, 1242, 1643, 1665, 2060
KroI	GCCGGC	1 cut(s)	1058
KroNI	GCCGGC	1 cut(s)	1060
Kzo9I	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	2 cut(s)	154, 916
Lsp1109I	GCAGC	2 cut(s)	133, 445
LweI	GCATC	4 cut(s)	484, 592, 1147, 1858
MaeI	CTAG	5 cut(s)	57, 114, 423, 1118, 1473
MaeII	ACGT	4 cut(s)	451, 858, 1431, 2029
MalI	GATC	7 cut(s)	699, 777, 1008, 1095, 1386, 1764, 2123
MbiI	CCGCTC	1 cut(s)	241
MboI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
MboII	GAAGA	8 cut(s)	114, 479, 720, 740, 787, 974, 981, 2161
MfeI	CAATTG	1 cut(s)	1332
MflI	RGATCY	2 cut(s)	1384, 1762
MhlI	GDGCHC	2 cut(s)	849, 969
MlsI	TGGCCA	2 cut(s)	564, 1044
MluNI	TGGCCA	2 cut(s)	564, 1044
MlyI	GAGTC	4 cut(s)	17, 236, 951, 1915
MmeI	TCCRAC	8 cut(s)	460, 655, 880, 938, 1214, 1348, 1581, 2056
Mox20I	TGGCCA	2 cut(s)	564, 1044
MroNI	GCCGGC	1 cut(s)	1058
MroXI	GAANNNNTTC	2 cut(s)	715, 1407
MscI	TGGCCA	2 cut(s)	564, 1044
MseI	TTAA	5 cut(s)	573, 1173, 1479, 1497, 1725
MslI	CAYNNNNRTG	1 cut(s)	1644
Msp20I	TGGCCA	2 cut(s)	564, 1044
MspA1I	CMGCKG	1 cut(s)	1995
MspCI	CTTAAG	1 cut(s)	1478
MspI	CCGG	2 cut(s)	849, 1059
MspR9I	CCNGG	9 cut(s)	33, 189, 566, 750, 849, 1299, 1548, 1759, 1905
MunI	CAATTG	1 cut(s)	1332
Mva1269I	GAATGC	1 cut(s)	1569
MvaI	CCWGG	8 cut(s)	33, 189, 566, 750, 1299, 1548, 1759, 1905
MwoI	GCNNNNNNNGC	8 cut(s)	82, 170, 1050, 1059, 1446, 1805, 1961, 2069
NaeI	GCCGGC	1 cut(s)	1060
NciI	CCSGG	1 cut(s)	849
NdeII	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
NgoMIV	GCCGGC	1 cut(s)	1058
NlaIII	CATG	6 cut(s)	802, 1235, 1242, 1643, 1665, 2060
NlaIV	GGNNCC	1 cut(s)	1764
NspI	RCATGY	2 cut(s)	1665, 2060
NspV	TTCGAA	1 cut(s)	386
PagI	TCATGA	1 cut(s)	798
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	1 cut(s)	2056
PciSI	GCTCTTC	1 cut(s)	957
PcsI	WCGNNNNNNNCGW	1 cut(s)	1437
PctI	GAATGC	1 cut(s)	1569
PdiI	GCCGGC	1 cut(s)	1060
PdmI	GAANNNNTTC	2 cut(s)	715, 1407
PfeI	GAWTC	7 cut(s)	283, 343, 668, 1235, 1910, 1987, 2045
PkrI	GCNGC	3 cut(s)	148, 240, 460
PleI	GAGTC	4 cut(s)	17, 235, 950, 1915
PpsI	GAGTC	4 cut(s)	17, 235, 950, 1915
Ppu21I	YACGTR	1 cut(s)	2030
PpuMI	RGGWCCY	1 cut(s)	1755
PscI	ACATGT	1 cut(s)	2056
PshBI	ATTAAT	1 cut(s)	573
PsiI	TTATAA	1 cut(s)	1949
Psp5II	RGGWCCY	1 cut(s)	1755
Psp6I	CCWGG	8 cut(s)	31, 187, 564, 748, 1297, 1546, 1757, 1903
PspFI	CCCAGC	1 cut(s)	1517
PspGI	CCWGG	8 cut(s)	31, 187, 564, 748, 1297, 1546, 1757, 1903
PspN4I	GGNNCC	1 cut(s)	1764
PspPI	GGNCC	4 cut(s)	176, 1448, 1649, 1755
PspPPI	RGGWCCY	1 cut(s)	1755
PsrI	GAACNNNNNNTAC	2 cut(s)	237, 269
PstNI	CAGNNNCTG	1 cut(s)	1891
PsuI	RGATCY	2 cut(s)	1384, 1762
PvuII	CAGCTG	1 cut(s)	1995
RsaI	GTAC	6 cut(s)	376, 684, 841, 1280, 1531, 1879
RsaNI	GTAC	6 cut(s)	375, 683, 840, 1279, 1530, 1878
RseI	CAYNNNNRTG	1 cut(s)	1644
SalI	GTCGAC	1 cut(s)	593
SapI	GCTCTTC	1 cut(s)	957
SaqAI	TTAA	5 cut(s)	573, 1173, 1479, 1497, 1725
SatI	GCNGC	3 cut(s)	147, 239, 459
Sau3AI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
Sau96I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
SchI	GAGTC	4 cut(s)	17, 236, 951, 1915
ScrFI	CCNGG	9 cut(s)	33, 189, 566, 750, 849, 1299, 1548, 1759, 1905
SduI	GDGCHC	2 cut(s)	849, 969
SfaNI	GCATC	4 cut(s)	484, 592, 1147, 1858
SfuI	TTCGAA	1 cut(s)	386
SinI	GGWCC	3 cut(s)	176, 1649, 1755
SmiMI	CAYNNNNRTG	1 cut(s)	1644
SmlI	CTYRAG	2 cut(s)	643, 1478
SmoI	CTYRAG	2 cut(s)	643, 1478
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	5 cut(s)	239, 446, 461, 924, 2072
SspMI	CTAG	5 cut(s)	57, 114, 423, 1118, 1473
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	9 cut(s)	31, 187, 564, 748, 847, 1297, 1546, 1757, 1903
StyI	CCWWGG	3 cut(s)	139, 1045, 1693
TaaI	ACNGT	8 cut(s)	11, 291, 844, 953, 1217, 1321, 1847, 1862
TaiI	ACGT	4 cut(s)	454, 861, 1434, 2032
TaqI	TCGA	6 cut(s)	131, 243, 386, 410, 594, 758
TatI	WGTACW	4 cut(s)	374, 682, 1278, 1529
TauI	GCSGC	1 cut(s)	241
TfiI	GAWTC	7 cut(s)	283, 343, 668, 1235, 1910, 1987, 2045
Tru1I	TTAA	5 cut(s)	573, 1173, 1479, 1497, 1725
Tru9I	TTAA	5 cut(s)	573, 1173, 1479, 1497, 1725
TscAI	CASTG	2 cut(s)	849, 1896
TseI	GCWGC	2 cut(s)	146, 458
TspGWI	ACGGA	1 cut(s)	1760
TspRI	CASTG	2 cut(s)	849, 1896
Vha464I	CTTAAG	1 cut(s)	1478
VpaK11BI	GGWCC	3 cut(s)	176, 1649, 1755
VspI	ATTAAT	1 cut(s)	573
XapI	RAATTY	2 cut(s)	331, 1707
XceI	RCATGY	2 cut(s)	1665, 2060
XcmI	CCANNNNNNNNNTGG	2 cut(s)	833, 2010
XmiI	GTMKAC	2 cut(s)	271, 594
XmnI	GAANNNNTTC	2 cut(s)	715, 1407
XspI	CTAG	5 cut(s)	57, 114, 423, 1118, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.