Rorug04G0346100

Protein PLANT CADMIUM RESISTANCE

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
51822930 .. 51832526
9597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0346100.1

Sequence Viewer

Length: 5031 bp
ATGGATTCTTACAGACCGCAGCAGCAGCAGCAGCAGCAGCAGTACATGAGGCCACCGCCACCGGCCACGTCGGATCCGTACCACTACCAACAGCAACAACCACCGCCAAGACCACCACTCCCTCAGCAGCAGCAAGGCGCGTGGTACTCGAACCAGAACCAGTACCAGTACCACTCATTACAGTCCCCGTCGCCTCCTCCGCAACAGTGGGGTCCGCCGCCTCACGCAGACCATCTTCCTCCCCCGCCGGGCTCTTATCCTCCGCCACCGCCTCCTCCTTATTCTGCGCGCCACTACCGCCCTCACGGACCTCCTCAGTCTTATCATCCTCAGGAGTGGGCAGCTCAGAGTCGGCCGAATAACCAAGGTTGGGAATACCCAGCCCATAACAATGAGCAAGATTGGGCAGCCAAGGCTAGGGCATGGGCAGCTAGGACGGCAATGGAGAACCAGGATCAGCAATCACAGTTTACTCCAGCCGGCAGACCAGAAGAACACTCTCATTATCATGAGCAGTATCCTCAAAGTCAGCACCAGTCTCTTTCTGCATCTAGCTATCAACAGGTTTCAGTTTCAGGGACACCGACACACCGGCCACCAGGAGTTCATCCCCAGGACACTACCTATATCGGCTCCGAACCATCTTCTTATGGACATCATGCTGTCAGATCTGCAATTCCATCTGTTCATCAGCAGGAGGTACCTTCTAGTTATTCTTCTGTTACAGGCAATGACGCTTCTGCAGAACTGAATGAGCACTCCTACAACTTCTTACCTATGCCAAATTCCTCAGGTCAGGAAGGACAGCACCATATGCAACAATCCCATGCAATACCATTTGGATATGGCAGTCATTCTGCAGATCCAGCAACCAATCTTGCTGACCAGCCTTTAGAATTTGCATCTGGGTTTAATTCTGATCATGGTGCTCACGCATCCAGCTATCCTTATCATGATTCAGGTGGAAGTATAAGAGGTGTGGACCCTGCTACAACAGTTCCTTCCATGAATTCTTGGACTGTTTCTGTTGCACCTGGTGTGGTATATCCTCCTACCCTTCCAGTTCTACCATCAGGACCACAGCATGATCCTTCTATGACGATACCCTCTCCGGTCCCTGGAAATGCTCCACATTCATTTGGTAGTTTTCCTGGATTGAGCCTCCAGCCAACAATTCCAACCACTGGTCCTCCCTTTGCTCTCACTGCAGGAACTGCTGGTCATCCTACTGTGGCCTTCCCTGGTGATGCATACGGAGTTTCTACAATTTCTGAGCGCCCAAAAAAGGCTGCAGTGCCTAATTGGCTTAGAGAGGAAATTAAGAAAGTAAGCATCACAAATTCCACCATGGACCATCTCAAGGAGGAAACACAGTCTGTTGAGGATGAAGGTGTTGACAGATCTTTTGGGAAGGGTGATCACGCCGATAGCAAAAGCATTGATTCTTCTAGATCAACTGAAGAAGAGGATGATGAGGATGAGGTGGAGGCAGCTCGGACTGCAGCAATTAACAAGGAAATAAAGCGTATCCTAACTGAAGTTCTCTCAACGGTTACTGATGAGCTCTTTGATGAAATCGCAACAAAAGTTCTTAGTGAAGATGATCTAACATCTGAAGTTAGACAGGGCAGACTCCCATCAAACCATAAGGTATTGCCATCTACCCCAGCAGTTTCAGATGCCAAGGCTTCTGCTAAGCTTCTAATTCCAGTCAAGACTAGGGAATCTGAGACTGAAGATGTCGGTGAAAAATCTAGCTCCAGTACACCTGGTGATATATTGGGTCTTGCAAATTATGCTACTGATGATGACGACGATGATGATGATGGAGGTGGTGAAATTCCGAGTTCTGGTGTGCCAAAATCTGGGAAAGATCAGATTACTGTTAGAAAGCCTCATGAGTCGCATGATGCCACTGCAAATGGCAGTTCTCCAGTAGAGCTTGAAGAGCACAGGAGAAGTCAGACAAGTTTGCCGGATGATCTGAGCAAGAGTGATATTAGTTATAATAGAAACAAGAGTGAGGAAAGTAATGTTGATAAATATCTGCAAGATGGGACTACTGTGGAACCTGAACTATCTACGGAAAATGTTAATGTCAAAAGGACAGCAAAAAATGACCCACAAAGTAGGGAATCCAGGATGAAGCCAGATAAGCATGATCGACATGAGAGTAAAAGGAGTTCTTTGAAAGAAAATAAGGAGGTAGACAGTGGTAAGATTAGGACAGACGAGAAGGGTGATGAGAATCGTAGGAGGCAGGATGAGAGGCCTCTGAGAAAGGAAAGGACAGATGATCGGAATGATTCAAAAGAAAAGATCAAAGACCAAAATGTTAAGCCTGGAGATAAAGCAAAGGAATCTGATTCAAGAAAAAGGTCTTCCCATGTTGATGTTGACGAGGACAAAAGAGAAACAGATAGACTCCGTAGAGATAGTTCTAAAGAAGATGTGAGCAGAAAAAGAGAACGAACAAAGAATAAGGAGGATGATAGATCAAGACGTAAACATTCTACTGACTCAAGCAGGCACAAGAGAAGGCGCTCCTCTTCCATTGACAGCAAGGATAACTCGGTTAATCATGCCAATCATTCAAGTGATGAATCTTCTGAGGATTCTAAAAGGTACATTCAAGGAGACGTCACTCATCACGTTCACCTGTCAGGTCTAGGAGAAGACAAGTTTCGCGGTCTCCACATAGCAAGCATTCTCAGCGCAGGCATTCTCCCTACTCTTCTCTTGATAGCAACAGGGGGAAAGGGTCAAGATCCAGATCACCTGTGCGGCGGCAGAGATGATTGGAGGACGGAACCTACAAGTCAAGTGCCAGCGTTATGGCCCAAAGTTGTTCAAGCTTCGATAAGCATTGGCACAAGTTCCACACAGACATCTGTGCACTATATGCAGCTATTGCAGTTGAATGCTATACATCTAAATAATAGTGTTTTGTGCATATGGGCAATACACTTTGTATTTAAGGATCCAGAAAATGATATTGATCGCCTTGAGGCATTTGGAAGGGGAGGCTCCGGTCTGTGGTCTGTTTGGCTATGTGGGTTTGCGCTGATTGGTCTCTCTTTCTATGCCACTCAGAGGCTACCTTCCATCAAGGATCAGATCATGATGAGGCCCAAGCTCGGTCAACGAGTTGGTGACGTTGCAGAGACGCCGAGGATTATCATATTCTCGGCGCCGAGGTCGTTTAGTGGTCCTGTTGGGGATAGGCAGAGTCTAGCTCTTCGTTCATGGCTAGCTTTGTCACCAGAGATTACGGTTGTGCTGTTCAGCAAAGACCCTTCTGTTGTTTCTTTTGCTCAAGGGTTTGGTTCTCGGGTTGTGGTGGATCCCAACATTGATTTCACGTTCCTCGGTACCCCATTTTTTCATTCGATGATGGCAAGAACATGGTCTTTTTCACCAGACATATCTGTTCTGGTTGATCCAGAAACAATTGTTTTACCTGACTTCATTTCCACCCTGAATTATGCTTACAATCTTGATGATGATTGGCTTCTAGTTGCTTCATCACAAAATGTCTCCTACTTCCCATTCTACTTGGATGAGGATGGAAAGCATTGGCGAAGGGAGGATGGCAAATCGATGAGAACACATGAGTTGCAGGAGATAATTGGTCATAGTTGGCAGCAGACTCCTTGCGAACAGAAATTGCTTATGGCTTGGAATAGTGGAGATCTTGCCCTATATTCGGGAGTCCTTCCTCCTTTTTTGTATGGTAGGGGGGTGCACAATAGTTGGGTCATTAATGAGGCCTTGTCATCAGAGCTTAGGTTTGTATTTGATGCCAGTTGGACAATCTCAAGCTTATATCTGATTAGTCAGGAGCATCTGAATAACTGGACTGTTGGAGCTTCCGATGCTTTAATTTTTGAAAGAAGAAGCTGGGAATATGCTGGAAACTCTCATGTTGGAGCATTATATGGATCATTGTCTCATTATGAAACTAATAATTCTAGCTTGATAAAACTTTTGAAATGTGATGGCCAATATATCTTTGTCAACAAAACGGAAAACATTTGTTCGTCTGCATACCGACGTGCTGGCTTGGGTTCCTGGTGGAAGAAGAAAAGTTTGGGTTGGGTTGAGGGTGTTAAATCACAAGGCGAGTTATTAGATTGCACTCCTATGGTTCCCACAAAGCATTCAAAACCATTAGACTATCCATTTTCCTTAGAGACACTTCTACCATTAAATGCAGACAAAAATAAGACAATTGTGCTTGCTGCTGCTGGATATAGTTACAAGGACATGCTAATGAGCTGGGTGTGTAGAATGCGCCACCTACAGGTCACAAATTTTATCATTTGTGCCCTCGACCAGGAGATCTACGAGTTCTCTGTCTTGATGGGCCTGCCTGTATTCAGGGATCCAGTTGCACCAAGTGAGATAAGCTTCAATGATTGCCACTTCGGAACAAAATGCTTTCAGAAGGTGACCAAAGTGAAATCCAGAATGGTTTTAAAGATACTAAAGATGGGTTACAATGTACTTCTTAGTGACGTGGATGTGTATTGGTTTGGAAATCCATTGCCATTGCTCTGGTCCTTTGGTCCTGCTGTTCTTGCAGCTCAGTCGGATGAATTCAAGAAAACAGGACCAATTAACTTACCTAGGCGCTTGAACTCTGGCTTCTACTTTGCCCGTTCAGATAGTTCGACAATTGCTGCTATGAAGAAGGTCGTGGCACATGCAGCAACTTCGGGTCTATCTGAACAGCCAAGCTTCTATGACACACTGTGTGGAGAAGGGGGCTCCAATCGTGTGGGTGCCAATAGATGCTTAGAACCTGAAACAAATCTGACTGTCCATTTCTTGGACAGAGATCTCTTCCCAAATGGGGCATATCTAGAACTATGGCATAGGAAAAATGTGAGAGCAGCCTGTGTGAAGCAGGGATGTTTGGTTCTCCATAACAATTGGATCAGTGGGAGGCTGAAGAAGCTAGAAAGACAGATGTTATCTGGCCTATGGGACTTTGATACTAGCACAAGAATGTGTCAGGCACAACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1676

Amino Acids

186.85

Weight (kDa)

6.04

Isoelectric Point (pI)

56.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleotid_trans PF03407 1436 - 1656 3.5e-45 Nucleotide-diphospho-sugar transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2007
AatII GACGTC 1 cut(s) 2643
Acc65I GGTACC 2 cut(s) 700, 3371
AccB1I GGYRCC 4 cut(s) 700, 3190, 3371, 4784
AccB7I CCANNNNNTGG 3 cut(s) 1184, 1865, 4831
AccI GTMKAC 1 cut(s) 2208
AccII CGCG 3 cut(s) 140, 289, 2688
AcoI YGGCCR 4 cut(s) 63, 353, 593, 4000
AcsI RAATTY 7 cut(s) 784, 896, 1009, 1339, 1839, 4312, 4598
AcuI CTGAAG 5 cut(s) 1479, 1557, 1635, 1755, 4973
AcyI GRCGYC 3 cut(s) 2640, 3167, 3191
AdeI CACNNNGTG 5 cut(s) 1037, 1772, 4400, 4755, 4757
AjiI CACGTC 3 cut(s) 69, 4055, 4519
AjuI GAANNNNNNNTTGG 4 cut(s) 3341, 3373, 4073, 4105
AloI GAACNNNNNNTCC 2 cut(s) 4905, 4937
Alw21I GWGCWC 6 cut(s) 759, 931, 1566, 1953, 2898, 3747
Alw26I GTCTC 9 cut(s) 543, 1724, 2631, 2696, 3077, 3158, 3541, 3954, 4187
Alw44I GTGCAC 2 cut(s) 2894, 3743
AlwNI CAGNNNCTG 1 cut(s) 1214
Ama87I CYCGRG 1 cut(s) 3330
ApaLI GTGCAC 2 cut(s) 2894, 3743
ApoI RAATTY 7 cut(s) 784, 896, 1009, 1339, 1839, 4312, 4598
ArsI GACNNNNNNTTYG 2 cut(s) 1388, 1420
AseI ATTAAT 1 cut(s) 3762
Asp718I GGTACC 2 cut(s) 700, 3371
AspA2I CCTAGG 1 cut(s) 4628
AsuC2I CCSGG 1 cut(s) 249
AsuNHI GCTAGC 1 cut(s) 3250
AvaI CYCGRG 1 cut(s) 3330
AvrII CCTAGG 1 cut(s) 4628
AxyI CCTNAGG 2 cut(s) 330, 790
BaeGI GKGCMC 3 cut(s) 2898, 3747, 4330
BalI TGGCCA 1 cut(s) 4002
BamHI GGATCC 4 cut(s) 73, 2980, 3343, 4384
BanI GGYRCC 4 cut(s) 700, 3190, 3371, 4784
BanII GRGCYC 3 cut(s) 254, 1566, 4772
BbsI GAAGAC 2 cut(s) 2373, 2682
Bbv12I GWGCWC 6 cut(s) 759, 931, 1566, 1953, 2898, 3747
BbvCI CCTCAGC 1 cut(s) 123
BceAI ACGGC 1 cut(s) 453
BcgI CGANNNNNNTGC 4 cut(s) 4572, 4606, 4698, 4732
BciVI GTATCC 2 cut(s) 528, 1538
BclI TGATCA 2 cut(s) 919, 1417
BcnI CCSGG 1 cut(s) 249
BcoDI GTCTC 9 cut(s) 543, 1724, 2631, 2696, 3077, 3158, 3541, 3954, 4187
BfmI CTRYAG 6 cut(s) 741, 858, 1206, 1290, 1500, 4301
BfoI RGCGCY 4 cut(s) 1279, 2545, 3194, 4636
BfuI GTATCC 2 cut(s) 528, 1538
BglI GCCNNNNNGGC 1 cut(s) 1303
BglII AGATCT 5 cut(s) 668, 1400, 3691, 4341, 4840
BlnI CCTAGG 1 cut(s) 4628
BlpI GCTNAGC 1 cut(s) 1695
BmeT110I CYCGRG 1 cut(s) 3330
BmgBI CACGTC 3 cut(s) 69, 4055, 4519
BmtI GCTAGC 1 cut(s) 3254
BpiI GAAGAC 2 cut(s) 2373, 2682
BplI GAGNNNNNCTC 2 cut(s) 3220, 3252
BpmI CTGGAG 5 cut(s) 459, 1148, 1744, 1917, 2364
Bpu10I CCTNAGC 2 cut(s) 123, 3785
Bpu1102I GCTNAGC 1 cut(s) 1695
BpuEI CTTGAG 5 cut(s) 1343, 2506, 3026, 3300, 3802
BpuMI CCSGG 1 cut(s) 249
Bsa29I ATCGAT 1 cut(s) 3599
BsaBI GATNNNNATC 4 cut(s) 2043, 2247, 2772, 2997
BsaHI GRCGYC 3 cut(s) 2640, 3167, 3191
BsaI GGTCTC 2 cut(s) 2696, 3077
BsaWI WCCGGW 2 cut(s) 1111, 3029
BsaXI ACNNNNNCTCC 4 cut(s) 102, 132, 1174, 1204
Bse118I RCCGGY 3 cut(s) 61, 479, 591
Bse21I CCTNAGG 2 cut(s) 330, 790
Bse3DI GCAATG 4 cut(s) 447, 736, 4544, 4550
Bse8I GATNNNNATC 4 cut(s) 2043, 2247, 2772, 2997
BseCI ATCGAT 1 cut(s) 3599
BseJI GATNNNNATC 4 cut(s) 2043, 2247, 2772, 2997
BseMI GCAATG 4 cut(s) 447, 736, 4544, 4550
BsePI GCGCGC 1 cut(s) 287
BseRI GAGGAG 4 cut(s) 186, 264, 303, 2536
BseSI GKGCMC 3 cut(s) 2898, 3747, 4330
BseX3I CGGCCG 1 cut(s) 353
BseYI CCCAGC 4 cut(s) 379, 1666, 3900, 4278
Bsh1236I CGCG 3 cut(s) 140, 289, 2688
Bsh1285I CGRYCG 1 cut(s) 356
BshNI GGYRCC 4 cut(s) 700, 3190, 3371, 4784
BshVI ATCGAT 1 cut(s) 3599
BsiEI CGRYCG 1 cut(s) 356
BsiHKAI GWGCWC 6 cut(s) 759, 931, 1566, 1953, 2898, 3747
BsiHKCI CYCGRG 1 cut(s) 3330
BsiSI CCGG 7 cut(s) 62, 248, 480, 592, 1112, 1976, 3030
BslFI GGGAC 5 cut(s) 169, 592, 1100, 2071, 5003
BsmAI GTCTC 9 cut(s) 543, 1724, 2631, 2696, 3077, 3158, 3541, 3954, 4187
BsmBI CGTCTC 2 cut(s) 2631, 3158
BsmFI GGGAC 5 cut(s) 169, 592, 1100, 2071, 5003
BsmI GAATGC 5 cut(s) 2706, 2721, 2926, 4159, 4296
Bso31I GGTCTC 2 cut(s) 2696, 3077
BsoBI CYCGRG 1 cut(s) 3330
Bsp1286I GDGCHC 9 cut(s) 254, 759, 931, 1566, 1953, 2898, 3747, 4330, 4772
Bsp1720I GCTNAGC 1 cut(s) 1695
Bsp19I CCATGG 1 cut(s) 1347
BspDI ATCGAT 1 cut(s) 3599
BspFNI CGCG 3 cut(s) 140, 289, 2688
BspHI TCATGA 4 cut(s) 508, 952, 1897, 3120
BspMAI CTGCAG 5 cut(s) 745, 862, 1210, 1294, 1504
BspOI GCTAGC 1 cut(s) 3254
BspQI GCTCTTC 2 cut(s) 1941, 3243
BspT107I GGYRCC 4 cut(s) 700, 3190, 3371, 4784
BspTNI GGTCTC 2 cut(s) 2696, 3077
BsrDI GCAATG 4 cut(s) 447, 736, 4544, 4550
BsrFI RCCGGY 3 cut(s) 61, 479, 591
BssAI RCCGGY 3 cut(s) 61, 479, 591
BssHII GCGCGC 1 cut(s) 287
BssNI GRCGYC 3 cut(s) 2640, 3167, 3191
BssT1I CCWWGG 5 cut(s) 364, 411, 1347, 1683, 4628
Bst6I CTCTTC 6 cut(s) 1458, 1941, 2554, 2739, 3243, 4850
BstACI GRCGYC 3 cut(s) 2640, 3167, 3191
BstAPI GCANNNNNTGC 5 cut(s) 814, 1214, 1796, 2902, 2911
BstDSI CCRYGG 1 cut(s) 1347
BstEII GGTNACC 1 cut(s) 4450
BstENI CCTNNNNNAGG 1 cut(s) 4334
BstFNI CGCG 3 cut(s) 140, 289, 2688
BstH2I RGCGCY 4 cut(s) 1279, 2545, 3194, 4636
BstMAI GTCTC 9 cut(s) 543, 1724, 2631, 2696, 3077, 3158, 3541, 3954, 4187
BstMCI CGRYCG 1 cut(s) 356
BstNSI RCATGY 2 cut(s) 4270, 4709
BstPI GGTNACC 1 cut(s) 4450
BstSFI CTRYAG 6 cut(s) 741, 858, 1206, 1290, 1500, 4301
BstSLI GKGCMC 3 cut(s) 2898, 3747, 4330
BstUI CGCG 3 cut(s) 140, 289, 2688
BstV2I GAAGAC 2 cut(s) 2373, 2682
BstXI CCANNNNNNTGG 3 cut(s) 2835, 4557, 4780
BstZI CGGCCG 1 cut(s) 353
Bsu15I ATCGAT 1 cut(s) 3599
Bsu36I CCTNAGG 2 cut(s) 330, 790
BsuI GTATCC 2 cut(s) 528, 1538
BsuTUI ATCGAT 1 cut(s) 3599
BtgI CCRYGG 1 cut(s) 1347
BtrI CACGTC 3 cut(s) 69, 4055, 4519
BtsI GCAGTG 3 cut(s) 1203, 1299, 1914
BtsIMutI CAGTG 8 cut(s) 212, 1182, 1203, 1299, 1914, 2218, 4751, 4948
CaiI CAGNNNCTG 1 cut(s) 1214
CciI TCATGA 4 cut(s) 508, 952, 1897, 3120
Cfr10I RCCGGY 3 cut(s) 61, 479, 591
ClaI ATCGAT 1 cut(s) 3599
CseI GACGC 2 cut(s) 743, 3175
CsiI ACCWGGT 2 cut(s) 1033, 1768
CspCI CAANNNNNGTGG 2 cut(s) 122, 157
DinI GGCGCC 1 cut(s) 3192
DraI TTTAAA 1 cut(s) 4479
DraIII CACNNNGTG 5 cut(s) 1037, 1772, 4400, 4755, 4757
EaeI YGGCCR 4 cut(s) 63, 353, 593, 4000
EagI CGGCCG 1 cut(s) 353
Eam1104I CTCTTC 6 cut(s) 1458, 1941, 2554, 2739, 3243, 4850
EarI CTCTTC 6 cut(s) 1458, 1941, 2554, 2739, 3243, 4850
EciI GGCGGA 2 cut(s) 204, 252
Ecl136II GAGCTC 1 cut(s) 1564
EclXI CGGCCG 1 cut(s) 353
Eco130I CCWWGG 5 cut(s) 364, 411, 1347, 1683, 4628
Eco147I AGGCCT 2 cut(s) 2272, 3770
Eco24I GRGCYC 3 cut(s) 254, 1566, 4772
Eco31I GGTCTC 2 cut(s) 2696, 3077
Eco52I CGGCCG 1 cut(s) 353
Eco53kI GAGCTC 1 cut(s) 1564
Eco57I CTGAAG 5 cut(s) 1479, 1557, 1635, 1755, 4973
Eco81I CCTNAGG 2 cut(s) 330, 790
Eco88I CYCGRG 1 cut(s) 3330
Eco91I GGTNACC 1 cut(s) 4450
EcoICRI GAGCTC 1 cut(s) 1564
EcoNI CCTNNNNNAGG 1 cut(s) 4334
EcoO65I GGTNACC 1 cut(s) 4450
EcoRI GAATTC 2 cut(s) 1009, 4598
EcoT14I CCWWGG 5 cut(s) 364, 411, 1347, 1683, 4628
EcoT22I ATGCAT 1 cut(s) 1252
EcoT38I GRGCYC 3 cut(s) 254, 1566, 4772
EgeI GGCGCC 1 cut(s) 3192
EheI GGCGCC 1 cut(s) 3192
ErhI CCWWGG 5 cut(s) 364, 411, 1347, 1683, 4628
Esp3I CGTCTC 2 cut(s) 2631, 3158
FalI AAGNNNNNCTT 2 cut(s) 2170, 2202
FaqI GGGAC 5 cut(s) 169, 592, 1100, 2071, 5003
FauI CCCGC 1 cut(s) 252
FauNDI CATATG 2 cut(s) 813, 2954
FbaI TGATCA 2 cut(s) 919, 1417
FblI GTMKAC 1 cut(s) 2208
FriOI GRGCYC 3 cut(s) 254, 1566, 4772
GsaI CCCAGC 4 cut(s) 383, 1670, 3904, 4282
GsuI CTGGAG 5 cut(s) 459, 1148, 1744, 1917, 2364
HaeII RGCGCY 4 cut(s) 1279, 2545, 3194, 4636
HapII CCGG 7 cut(s) 62, 248, 480, 592, 1112, 1976, 3030
HgaI GACGC 2 cut(s) 743, 3175
Hin1I GRCGYC 3 cut(s) 2640, 3167, 3191
HincII GTYRAC 4 cut(s) 1396, 2398, 3143, 4018
HindII GTYRAC 4 cut(s) 1396, 2398, 3143, 4018
HindIII AAGCTT 5 cut(s) 1697, 2853, 3820, 4408, 4738
HpaII CCGG 7 cut(s) 62, 248, 480, 592, 1112, 1976, 3030
Hpy99I CGWCG 4 cut(s) 73, 193, 1817, 4056
HpyCH4IV ACGT 8 cut(s) 68, 2503, 2640, 2652, 3156, 3362, 4054, 4518
HpySE526I ACGT 8 cut(s) 68, 2503, 2640, 2652, 3156, 3362, 4054, 4518
Hsp92I GRCGYC 3 cut(s) 2640, 3167, 3191
KasI GGCGCC 1 cut(s) 3190
KpnI GGTACC 2 cut(s) 704, 3375
KroI GCCGGC 1 cut(s) 479
KroNI GCCGGC 1 cut(s) 481
Ksp22I TGATCA 2 cut(s) 919, 1417
LguI GCTCTTC 2 cut(s) 1941, 3243
LmnI GCTCC 9 cut(s) 638, 1132, 1763, 2549, 3032, 3841, 3866, 3929, 4775
MabI ACCWGGT 2 cut(s) 1033, 1768
MaeII ACGT 8 cut(s) 68, 2503, 2640, 2652, 3156, 3362, 4054, 4518
MfeI CAATTG 4 cut(s) 3450, 4230, 4677, 4933
MhlI GDGCHC 9 cut(s) 254, 759, 931, 1566, 1953, 2898, 3747, 4330, 4772
MlsI TGGCCA 1 cut(s) 4002
MluNI TGGCCA 1 cut(s) 4002
Mly113I GGCGCC 1 cut(s) 3191
MlyI GAGTC 8 cut(s) 358, 1626, 1910, 2418, 2513, 3238, 3643, 3720
MmeI TCCRAC 6 cut(s) 51, 1202, 3788, 3844, 3907, 4572
Mox20I TGGCCA 1 cut(s) 4002
Mph1103I ATGCAT 1 cut(s) 1252
MroNI GCCGGC 1 cut(s) 479
MscI TGGCCA 1 cut(s) 4002
MslI CAYNNNNRTG 8 cut(s) 390, 507, 2391, 2595, 4142, 4271, 5009, 5026
Msp20I TGGCCA 1 cut(s) 4002
MspI CCGG 7 cut(s) 62, 248, 480, 592, 1112, 1976, 3030
MunI CAATTG 4 cut(s) 3450, 4230, 4677, 4933
Mva1269I GAATGC 5 cut(s) 2706, 2721, 2926, 4159, 4296
MvnI CGCG 3 cut(s) 140, 289, 2688
NaeI GCCGGC 1 cut(s) 481
NarI GGCGCC 1 cut(s) 3191
NciI CCSGG 1 cut(s) 249
NcoI CCATGG 1 cut(s) 1347
NdeI CATATG 2 cut(s) 813, 2954
NgoMIV GCCGGC 1 cut(s) 479
NheI GCTAGC 1 cut(s) 3250
NmeAIII GCCGAG 3 cut(s) 3167, 3195, 3219
NmuCI GTSAC 6 cut(s) 2641, 3152, 3258, 4306, 4450, 4514
NsiI ATGCAT 1 cut(s) 1252
NspI RCATGY 2 cut(s) 4270, 4709
PagI TCATGA 4 cut(s) 508, 952, 1897, 3120
PauI GCGCGC 1 cut(s) 287
PceI AGGCCT 2 cut(s) 2272, 3770
PciSI GCTCTTC 2 cut(s) 1941, 3243
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PctI GAATGC 5 cut(s) 2706, 2721, 2926, 4159, 4296
PdiI GCCGGC 1 cut(s) 481
PflMI CCANNNNNTGG 3 cut(s) 1184, 1865, 4831
PfoI TCCNGGA 2 cut(s) 1150, 2138
PleI GAGTC 8 cut(s) 357, 1626, 1909, 2418, 2513, 3237, 3643, 3719
PluTI GGCGCC 1 cut(s) 3194
PpsI GAGTC 8 cut(s) 357, 1626, 1909, 2418, 2513, 3237, 3643, 3719
PshBI ATTAAT 1 cut(s) 3762
PsiI TTATAA 1 cut(s) 2007
Psp124BI GAGCTC 1 cut(s) 1566
PspEI GGTNACC 1 cut(s) 4450
PspFI CCCAGC 4 cut(s) 379, 1666, 3900, 4278
PsrI GAACNNNNNNTAC 4 cut(s) 2167, 2199, 2422, 2454
PstI CTGCAG 5 cut(s) 745, 862, 1210, 1294, 1504
PstNI CAGNNNCTG 1 cut(s) 1214
PteI GCGCGC 1 cut(s) 287
RseI CAYNNNNRTG 8 cut(s) 390, 507, 2391, 2595, 4142, 4271, 5009, 5026
SacI GAGCTC 1 cut(s) 1566
SapI GCTCTTC 2 cut(s) 1941, 3243
SchI GAGTC 8 cut(s) 358, 1626, 1910, 2418, 2513, 3238, 3643, 3720
SduI GDGCHC 9 cut(s) 254, 759, 931, 1566, 1953, 2898, 3747, 4330, 4772
SexAI ACCWGGT 2 cut(s) 1033, 1768
SfcI CTRYAG 6 cut(s) 741, 858, 1206, 1290, 1500, 4301
SfoI GGCGCC 1 cut(s) 3192
SmiMI CAYNNNNRTG 8 cut(s) 390, 507, 2391, 2595, 4142, 4271, 5009, 5026
SmlI CTYRAG 5 cut(s) 1358, 2521, 3005, 3315, 3817
SmoI CTYRAG 5 cut(s) 1358, 2521, 3005, 3315, 3817
SseBI AGGCCT 2 cut(s) 2272, 3770
SspDI GGCGCC 1 cut(s) 3190
SstI GAGCTC 1 cut(s) 1566
StuI AGGCCT 2 cut(s) 2272, 3770
StyI CCWWGG 5 cut(s) 364, 411, 1347, 1683, 4628
TaiI ACGT 8 cut(s) 71, 2506, 2643, 2655, 3159, 3365, 4057, 4521
TaqI TCGA 7 cut(s) 149, 2164, 2858, 3389, 3599, 4332, 4673
TaqII GACCGA 1 cut(s) 3128
TatI WGTACW 3 cut(s) 42, 1763, 4504
TauI GCSGC 3 cut(s) 220, 2787, 2790
TscAI CASTG 8 cut(s) 212, 1189, 1210, 1299, 1921, 2218, 4758, 4948
TseFI GTSAC 6 cut(s) 2641, 3152, 3258, 4306, 4450, 4514
Tsp45I GTSAC 6 cut(s) 2641, 3152, 3258, 4306, 4450, 4514
TspGWI ACGGA 7 cut(s) 66, 321, 1269, 2099, 2417, 2822, 4040
TspRI CASTG 8 cut(s) 212, 1189, 1210, 1299, 1921, 2218, 4758, 4948
Van91I CCANNNNNTGG 3 cut(s) 1184, 1865, 4831
VneI GTGCAC 2 cut(s) 2894, 3743
VspI ATTAAT 1 cut(s) 3762
XagI CCTNNNNNAGG 1 cut(s) 4334
XapI RAATTY 7 cut(s) 784, 896, 1009, 1339, 1839, 4312, 4598
XbaI TCTAGA 2 cut(s) 1448, 4864
XceI RCATGY 2 cut(s) 4270, 4709
XmaJI CCTAGG 1 cut(s) 4628
XmiI GTMKAC 1 cut(s) 2208
ZraI GACGTC 1 cut(s) 2641
Zsp2I ATGCAT 1 cut(s) 1252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.