peroxisome organization
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| KH_2 | PF07650 | 16 - 74 | 1.3e-11 | KH domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 122 |
| AciI | CCGC | 1 cut(s) | 222 |
| AluBI | AGCT | 4 cut(s) | 49, 58, 73, 193 |
| AluI | AGCT | 4 cut(s) | 49, 58, 73, 193 |
| Alw21I | GWGCWC | 3 cut(s) | 51, 75, 165 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 215 |
| AspLEI | GCGC | 2 cut(s) | 98, 123 |
| AsuHPI | GGTGA | 2 cut(s) | 67, 239 |
| BanII | GRGCYC | 2 cut(s) | 51, 75 |
| Bbv12I | GWGCWC | 3 cut(s) | 51, 75, 165 |
| BbvCI | CCTCAGC | 1 cut(s) | 99 |
| BfoI | RGCGCY | 1 cut(s) | 99 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 182, 214 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| BsaBI | GATNNNNATC | 1 cut(s) | 134 |
| BsaJI | CCNNGG | 1 cut(s) | 78 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 74, 104 |
| Bse118I | RCCGGY | 1 cut(s) | 224 |
| Bse8I | GATNNNNATC | 1 cut(s) | 134 |
| BseDI | CCNNGG | 1 cut(s) | 78 |
| BseJI | GATNNNNATC | 1 cut(s) | 134 |
| BseMII | CTCAG | 3 cut(s) | 90, 117, 213 |
| BsgI | GTGCAG | 1 cut(s) | 227 |
| BsiHKAI | GWGCWC | 3 cut(s) | 51, 75, 165 |
| BsiSI | CCGG | 2 cut(s) | 93, 225 |
| Bsp1286I | GDGCHC | 3 cut(s) | 51, 75, 165 |
| Bsp143I | GATC | 1 cut(s) | 129 |
| BspACI | CCGC | 1 cut(s) | 222 |
| BspCNI | CTCAG | 3 cut(s) | 91, 118, 212 |
| BsrFI | RCCGGY | 1 cut(s) | 224 |
| BssAI | RCCGGY | 1 cut(s) | 224 |
| BssECI | CCNNGG | 1 cut(s) | 78 |
| BssMI | GATC | 1 cut(s) | 129 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| Bst6I | CTCTTC | 1 cut(s) | 206 |
| BstDEI | CTNAG | 3 cut(s) | 99, 126, 199 |
| BstH2I | RGCGCY | 1 cut(s) | 99 |
| BstHHI | GCGC | 2 cut(s) | 98, 123 |
| BstKTI | GATC | 1 cut(s) | 132 |
| BstMBI | GATC | 1 cut(s) | 129 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 2 cut(s) | 24, 123 |
| CfoI | GCGC | 2 cut(s) | 98, 123 |
| Cfr10I | RCCGGY | 1 cut(s) | 224 |
| CviAII | CATG | 1 cut(s) | 236 |
| CviJI | RGCY | 5 cut(s) | 49, 58, 73, 143, 193 |
| CviKI_1 | RGCY | 5 cut(s) | 49, 58, 73, 143, 193 |
| DdeI | CTNAG | 3 cut(s) | 99, 126, 199 |
| DpnI | GATC | 1 cut(s) | 131 |
| DpnII | GATC | 1 cut(s) | 129 |
| Eam1104I | CTCTTC | 1 cut(s) | 206 |
| EarI | CTCTTC | 1 cut(s) | 206 |
| EciI | GGCGGA | 1 cut(s) | 211 |
| Ecl136II | GAGCTC | 2 cut(s) | 49, 73 |
| Eco24I | GRGCYC | 2 cut(s) | 51, 75 |
| Eco53kI | GAGCTC | 2 cut(s) | 49, 73 |
| EcoICRI | GAGCTC | 2 cut(s) | 49, 73 |
| EcoT38I | GRGCYC | 2 cut(s) | 51, 75 |
| FaeI | CATG | 1 cut(s) | 239 |
| FaiI | YATR | 2 cut(s) | 134, 237 |
| FatI | CATG | 1 cut(s) | 235 |
| FriOI | GRGCYC | 2 cut(s) | 51, 75 |
| FspAI | RTGCGCAY | 1 cut(s) | 122 |
| FspI | TGCGCA | 1 cut(s) | 122 |
| GlaI | GCGC | 2 cut(s) | 97, 122 |
| HaeII | RGCGCY | 1 cut(s) | 99 |
| HapII | CCGG | 2 cut(s) | 93, 225 |
| HhaI | GCGC | 2 cut(s) | 98, 123 |
| Hin1II | CATG | 1 cut(s) | 239 |
| Hin6I | GCGC | 2 cut(s) | 96, 121 |
| HinP1I | GCGC | 2 cut(s) | 96, 121 |
| HpaII | CCGG | 2 cut(s) | 93, 225 |
| HphI | GGTGA | 2 cut(s) | 67, 239 |
| Hpy188I | TCNGA | 2 cut(s) | 63, 167 |
| HpyAV | CCTTC | 2 cut(s) | 166, 171 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4IV | ACGT | 1 cut(s) | 159 |
| HpyCH4V | TGCA | 1 cut(s) | 208 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| HpyF3I | CTNAG | 3 cut(s) | 99, 126, 199 |
| HpySE526I | ACGT | 1 cut(s) | 159 |
| Hsp92II | CATG | 1 cut(s) | 239 |
| HspAI | GCGC | 2 cut(s) | 96, 121 |
| Kzo9I | GATC | 1 cut(s) | 129 |
| LmnI | GCTCC | 2 cut(s) | 70, 190 |
| LpnPI | CCDG | 3 cut(s) | 106, 124, 238 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeII | ACGT | 1 cut(s) | 159 |
| MaeIII | GTNAC | 2 cut(s) | 109, 227 |
| MalI | GATC | 1 cut(s) | 131 |
| MboI | GATC | 1 cut(s) | 129 |
| MboII | GAAGA | 1 cut(s) | 223 |
| MhlI | GDGCHC | 3 cut(s) | 51, 75, 165 |
| MnlI | CCTC | 6 cut(s) | 60, 73, 94, 174, 207, 208 |
| MroXI | GAANNNNTTC | 1 cut(s) | 215 |
| MspI | CCGG | 2 cut(s) | 93, 225 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NdeII | GATC | 1 cut(s) | 129 |
| NlaIII | CATG | 1 cut(s) | 239 |
| NmeAIII | GCCGAG | 1 cut(s) | 70 |
| NmuCI | GTSAC | 1 cut(s) | 227 |
| NsbI | TGCGCA | 1 cut(s) | 122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 215 |
| Psp124BI | GAGCTC | 2 cut(s) | 51, 75 |
| SacI | GAGCTC | 2 cut(s) | 51, 75 |
| Sau3AI | GATC | 1 cut(s) | 129 |
| SduI | GDGCHC | 3 cut(s) | 51, 75, 165 |
| SetI | ASST | 8 cut(s) | 51, 60, 75, 105, 162, 195, 200, 218 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SgrAI | CRCCGGYG | 1 cut(s) | 224 |
| SsiI | CCGC | 1 cut(s) | 222 |
| SstI | GAGCTC | 2 cut(s) | 51, 75 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TaiI | ACGT | 1 cut(s) | 162 |
| TaqI | TCGA | 1 cut(s) | 148 |
| TscAI | CASTG | 2 cut(s) | 31, 130 |
| TseFI | GTSAC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 1 cut(s) | 10 |
| TspRI | CASTG | 2 cut(s) | 31, 130 |
| XmnI | GAANNNNTTC | 1 cut(s) | 215 |