Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001737

Physical Location & Seq

Genomic Coordinates Forward (+)

27995688 .. 27998856

Gene Structure 3169 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0254200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGAAATCTTTCCAATGCTTTTTGTTGTCTCAGCATTTCTCTTCTCCCTTCTAAGTACCTCCACTACCAGTATACAAGACATCATTACCGTTAATCCAAGAGTATCAATCAAAGATGGAGGGAGTACCTTAGTTTCAGCTAAAGGAACAGCTGGAGGAAGCTTCAAATTGGGATTCTTTAGCCCAGGTAATTCGAAGAATCGATACGTGCGAATATGGTACAATGACCTATCTCCTCAGAAAGTTGTATGGGTGTGCAACAAAGAAACTCCCCTTACTGATCACTCGGGAGCTTTGAATCTCACTAGCCAAGGAGTTCTCGTTCTGTTCAATGGCACAAATAGTATTGTCTGGTCATCATCCAACAAGACTTCAAGCAACATAAGTAATCCAGTTGCTCAACTCTTGGAGTCGGGAAATTTCGTTGTGAAAGATGGATCAAATGAGGACTCAAAAGTTCTGTGGCAGAGCTTTGACTATCCAAGTGACACCTTACTACCAGGAATGAAGATCGGATGGGACTTAAAAACCGGCCTAAACAGTGGGTATCCCCAACTAGTTCTTAGGAATGGTTCCATAGCACATTACAGGTTGGGGTCATGGAATGGCCTTGGGTTCACAGGAAGTCCTCAACTTAGATCTCAGAACCAGTTTTTCAAACTTGACTTTGTGTCAAATGAGAATGAAGTATACTACAAATATGAGCTCCTGAGCACTTCACTTGAATCAAGATTAGTGCTCAACAGGTCAGGTTATTTGCAACGCTTCATGTGGAGTGGCACAAGAACTATCAATCGCGTTGTTTACTCAGCTCCAACAGATAAGTGTGACGCTTATAATGTGTGCGGTGCATTTGCTCTCTGCAGTGTTGATTCTCCTCAATTATGTGCATGCTTACAAGGTTTTGCATCAAATTCTTCAACGTCCACCAGGTGTCTTCGTAGAACTCCATTGAGTTGCAATGATTACCAAGATAGCTTCAAGAAGTTCACAAATGTGAAATTGCCCGACACATCTTTCTCCTTATTTTTCACAAATGTGGAATTGCCGGGCATATCTTTCTACATGTTTCACTTGGAAATAAGCCTTGAGGACTGTAAGAAAATGTGTTTGAAGAACTGCAGTTGCACTGCTTGTACAAATGTGGATGTAAGGGAAGGAGGAAGTGGCTGTTTGCTCTGGTTTGATGAACTCAATGACATACACGAAATCCCTACTGGTGGGCAAGACCTATTTGTAAAGATGGCTACCTCAGAATTAGGTGACATAAAGACAAACAAGAGCCCTTCAAAAAAAGAAAAGACAAACAAGAGATCTAGCATGAAGAAGCGGGTGGCTATCACAGTCAGCTTTGGGTTATTAGTCATGGGAGTGCTTATACTAGGATTGGTTTTCTACATCCGAAAGAAGAAATTGACAGGATATATGAAGAACATCCATGGAACCACGGAAGATGGTAATGAAGATATAGAGTTGCTAAAATTTGATTTGGGCACCTTATCCAAAGCAACGGATAACTTCTCAGACAATTATAAGCTGGGAGAAGGTGGTTTCGGACCAATATACAAGGGCACGTTGAAAGAAGGGGAAGACATAGCAGTGAAAAGGCTTTCAAAATGTTCTGGACAAGGAATAAAAGAATTCATGAATGAAGTAATGTTGATTGCTAAACTCCAGCACAGAAATCTTGTAAAGCTTCTTGGTTGCTGCGTTGAAGGAGATGAAAAAATGTTAATTTATGAATACATGCCCAATAGAAGCTTGGACTACTTCATATATGATGATACAAGAAGTAAAGAGCTTGGTTGGGATCAACGCATCAACATTATTGGCGGAATAGCTCGAGGCCTTCTCTATCTTCATCAAGATTCTAGACTGAGGATCATCCATAGAGATCTTAAAACTGGTAATGTTTTACTAGATAAAGATATGAACCCAAAAATATCTGATTTTGGGACGGCTAGAGCATTCAGAGGAGATCAAACAGCGGAAAATACTAAGACAGTGGTTGGGACATATGGTTATATGTCTCCTGAGTATGTGGTTGATGGGCTCTTCTCAATCAAGTCTGATGTCTATAGCTTCGGTGTCATGGTATTGGAGATAGTGAATGGGAAGAAGAACAGGGGATTTATTCATCCAGACCACCAACTTAACCTTCTAGGACATGTATGGACTCTATGGACTGAAGGAAGATCATTGGAAGTAATGGATAAGAAGTTAGATGGCTCCTATGATCTAACAGTAGTGTCACGATGCGAATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

755

Amino Acids

84.33

Weight (kDa)

8.44

Isoelectric Point (pI)

38.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	82 - 181	2.6e-34	D-mannose binding lectin
S_locus_glycop	PF00954	196 - 305	7.3e-27	S-locus glycoprotein domain
PAN_2	PF08276	345 - 401	1.5e-13	PAN-like domain
Pkinase	PF00069	509 - 707	2.4e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	511 - 707	5.3e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43740 AT3G43740 AT5G21090
fragaria_vesca	FvH4_3g14800 FvH4_3g14810 FvH4_3g14820 FvH4_3g17980 FvH4_3g18020 FvH4_3g18100 FvH4_3g27550
malus_domestica	MD11G1182200.v1.1
prunus_persica	Prupe.6G154900_v2.0.a1
pyrus_communis	pycom11g15710
rosa_chinensis	RchiOBHm_Chr4g0425121 RchiOBHm_Chr5g0024351 RchiOBHm_Chr5g0030061 RchiOBHm_Chr5g0049921
rosa_laevigata	RLG00000001776 RLG00000007397 RLG00000007401 RLG00000032794 RLG00000033241 RLG00000034665
rosa_multiflora	Rmu_co8267339.1_g000001 Rmu_co8518351.1_g000002 Rmu_sc0000333.1_g000069 Rmu_sc0003368.1_g000001 Rmu_ssc0000420.1_g000033
rosa_roxburghii	Rroxscaffold_1G00031390 Rroxscaffold_1G00054880 Rroxscaffold_1G00055800 Rroxscaffold_5G00367190
rosa_rugosa	Rorug04G0201800 Rorug05G0254200
rosa_samantha	Rh3CG306200 Rh4BG264000 Rh4CG275100 Rh4DG260100 Rh5AG174000 Rh5AG328600 Rh5BG170800 Rh5BG208600 Rh5DG213000 Rh7DG379000
rosa_wichuraiana	Rw4G022350 Rw5G015690 Rw5G019100 Rw5G031040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	837, 1533
AccB1I	GGYRCC	1 cut(s)	1493
AccI	GTMKAC	2 cut(s)	73, 690
AccII	CGCG	1 cut(s)	798
AciI	CCGC	4 cut(s)	846, 1330, 1833, 1988
AclWI	GGATC	3 cut(s)	445, 1818, 1889
AcsI	RAATTY	4 cut(s)	418, 913, 1481, 1640
AcuI	CTGAAG	1 cut(s)	2208
AdeI	CACNNNGTG	1 cut(s)	933
AfaI	GTAC	4 cut(s)	58, 127, 221, 1138
AfiI	CCNNNNNNNGG	1 cut(s)	1220
AflIII	ACRYGT	2 cut(s)	1065, 2167
AhdI	GACNNNNNGTC	1 cut(s)	670
AhlI	ACTAGT	1 cut(s)	556
AjnI	CCWGG	3 cut(s)	184, 499, 929
AjuI	GAANNNNNNNTTGG	2 cut(s)	2142, 2174
AleI	CACNNNNGTG	2 cut(s)	995, 1037
AloI	GAACNNNNNNTCC	2 cut(s)	306, 338
Alw21I	GWGCWC	3 cut(s)	708, 716, 741
Alw26I	GTCTC	2 cut(s)	34, 2034
AlwI	GGATC	3 cut(s)	445, 1818, 1889
Ama87I	CYCGRG	2 cut(s)	286, 1842
AoxI	GGCC	3 cut(s)	532, 607, 1846
ApeKI	GCWGC	1 cut(s)	1707
ApoI	RAATTY	4 cut(s)	418, 913, 1481, 1640
Asp700I	GAANNNNTTC	1 cut(s)	9
AspS9I	GGNCC	1 cut(s)	1556
AsuC2I	CCSGG	1 cut(s)	1050
AsuHPI	GGTGA	1 cut(s)	1274
AsuII	TTCGAA	1 cut(s)	194
AvaI	CYCGRG	2 cut(s)	286, 1842
AvaII	GGWCC	1 cut(s)	1556
BaeGI	GKGCMC	2 cut(s)	1496, 1574
BanI	GGYRCC	1 cut(s)	1493
BanII	GRGCYC	3 cut(s)	708, 1286, 2055
BarI	GAAGNNNNNNTAC	2 cut(s)	188, 220
BbsI	GAAGAC	2 cut(s)	929, 1596
Bbv12I	GWGCWC	3 cut(s)	708, 716, 741
BbvI	GCAGC	1 cut(s)	1694
BccI	CCATC	7 cut(s)	110, 428, 510, 1237, 1448, 2042, 2219
BceAI	ACGGC	1 cut(s)	1974
BciT130I	CCWGG	3 cut(s)	186, 501, 931
BciVI	GTATCC	1 cut(s)	558
BclI	TGATCA	1 cut(s)	280
BcnI	CCSGG	1 cut(s)	1050
BcoDI	GTCTC	2 cut(s)	34, 2034
BcuI	ACTAGT	1 cut(s)	556
BfaI	CTAG	8 cut(s)	306, 557, 1317, 1382, 1872, 1919, 1962, 2162
BfmI	CTRYAG	3 cut(s)	862, 1120, 2077
BfuI	GTATCC	1 cut(s)	558
BglII	AGATCT	3 cut(s)	638, 1313, 1894
BisI	GCNGC	1 cut(s)	1708
BlsI	GCNGC	1 cut(s)	1709
Bme1390I	CCNGG	4 cut(s)	186, 501, 931, 1050
Bme18I	GGWCC	1 cut(s)	1556
BmeRI	GACNNNNNGTC	1 cut(s)	670
BmeT110I	CYCGRG	2 cut(s)	286, 1842
BmgT120I	GGNCC	1 cut(s)	1556
BmiI	GGNNCC	4 cut(s)	574, 1444, 1495, 2230
BmrFI	CCNGG	4 cut(s)	186, 501, 931, 1050
BmsI	GCATC	3 cut(s)	917, 1827, 2246
BpiI	GAAGAC	2 cut(s)	929, 1596
BplI	GAGNNNNNCTC	2 cut(s)	1836, 1868
BpmI	CTGGAG	2 cut(s)	174, 1658
Bpu10I	CCTNAGC	1 cut(s)	710
Bpu14I	TTCGAA	1 cut(s)	194
BpuEI	CTTGAG	1 cut(s)	1109
BpuMI	CCSGG	1 cut(s)	1050
Bsa29I	ATCGAT	1 cut(s)	202
BsaAI	YACGTR	1 cut(s)	208
BsaBI	GATNNNNATC	1 cut(s)	2260
BsaJI	CCNNGG	5 cut(s)	184, 310, 610, 1438, 1446
BsaXI	ACNNNNNCTCC	2 cut(s)	306, 336
Bsc4I	CCNNNNNNNGG	1 cut(s)	1220
Bse118I	RCCGGY	1 cut(s)	530
Bse1I	ACTGG	5 cut(s)	69, 392, 649, 1222, 1909
Bse3DI	GCAATG	1 cut(s)	967
Bse8I	GATNNNNATC	1 cut(s)	2260
BseBI	CCWGG	3 cut(s)	186, 501, 931
BseCI	ATCGAT	1 cut(s)	202
BseDI	CCNNGG	5 cut(s)	184, 310, 610, 1438, 1446
BseGI	GGATG	7 cut(s)	359, 521, 1153, 1398, 1434, 1884, 2137
BseJI	GATNNNNATC	1 cut(s)	2260
BseLI	CCNNNNNNNGG	1 cut(s)	1220
BseMI	GCAATG	1 cut(s)	967
BseMII	CTCAG	9 cut(s)	45, 251, 656, 701, 822, 1266, 1536, 1868, 2025
BseNI	ACTGG	5 cut(s)	69, 392, 649, 1222, 1909
BseRI	GAGGAG	3 cut(s)	225, 867, 1989
BseSI	GKGCMC	2 cut(s)	1496, 1574
BseXI	GCAGC	1 cut(s)	1694
BseYI	CCCAGC	1 cut(s)	1537
Bsh1236I	CGCG	1 cut(s)	798
BshFI	GGCC	3 cut(s)	534, 609, 1848
BshNI	GGYRCC	1 cut(s)	1493
BshVI	ATCGAT	1 cut(s)	202
BsiHKAI	GWGCWC	3 cut(s)	708, 716, 741
BsiHKCI	CYCGRG	2 cut(s)	286, 1842
BsiSI	CCGG	2 cut(s)	531, 1049
BslFI	GGGAC	3 cut(s)	533, 1969, 2026
BslI	CCNNNNNNNGG	1 cut(s)	1220
BsmAI	GTCTC	2 cut(s)	34, 2034
BsmFI	GGGAC	3 cut(s)	533, 1969, 2026
BsmI	GAATGC	1 cut(s)	1967
BsnI	GGCC	3 cut(s)	534, 609, 1848
BsoBI	CYCGRG	2 cut(s)	286, 1842
Bsp119I	TTCGAA	1 cut(s)	194
Bsp1286I	GDGCHC	7 cut(s)	708, 716, 741, 1286, 1496, 1574, 2055
Bsp1407I	TGTACA	1 cut(s)	1136
Bsp19I	CCATGG	1 cut(s)	1438
BspACI	CCGC	4 cut(s)	846, 1330, 1833, 1988
BspANI	GGCC	3 cut(s)	534, 609, 1848
BspCNI	CTCAG	9 cut(s)	44, 250, 655, 702, 821, 1265, 1535, 1869, 2026
BspDI	ATCGAT	1 cut(s)	202
BspFNI	CGCG	1 cut(s)	798
BspHI	TCATGA	1 cut(s)	1644
BspLI	GGNNCC	4 cut(s)	574, 1444, 1495, 2230
BspMAI	CTGCAG	2 cut(s)	866, 1124
BspPI	GGATC	3 cut(s)	445, 1818, 1889
BspQI	GCTCTTC	1 cut(s)	2060
BspT104I	TTCGAA	1 cut(s)	194
BspT107I	GGYRCC	1 cut(s)	1493
BsrDI	GCAATG	1 cut(s)	967
BsrFI	RCCGGY	1 cut(s)	530
BsrGI	TGTACA	1 cut(s)	1136
BsrI	ACTGG	5 cut(s)	69, 392, 649, 1222, 1909
BssAI	RCCGGY	1 cut(s)	530
BssECI	CCNNGG	5 cut(s)	184, 310, 610, 1438, 1446
BssNAI	GTATAC	2 cut(s)	74, 691
BssT1I	CCWWGG	3 cut(s)	310, 610, 1438
Bst1107I	GTATAC	2 cut(s)	74, 691
Bst2UI	CCWGG	3 cut(s)	186, 501, 931
Bst4CI	ACNGT	6 cut(s)	91, 542, 1097, 1345, 2005, 2245
Bst6I	CTCTTC	2 cut(s)	47, 2060
BstAUI	TGTACA	1 cut(s)	1136
BstBAI	YACGTR	1 cut(s)	208
BstBI	TTCGAA	1 cut(s)	194
BstC8I	GCNNGC	1 cut(s)	892
BstDSI	CCRYGG	2 cut(s)	1438, 1446
BstF5I	GGATG	7 cut(s)	359, 521, 1153, 1398, 1434, 1884, 2137
BstFNI	CGCG	1 cut(s)	798
BstMAI	GTCTC	2 cut(s)	34, 2034
BstNI	CCWGG	3 cut(s)	186, 501, 931
BstNSI	RCATGY	4 cut(s)	894, 1069, 1750, 2171
BstSCI	CCNGG	4 cut(s)	184, 499, 929, 1048
BstSFI	CTRYAG	3 cut(s)	862, 1120, 2077
BstSLI	GKGCMC	2 cut(s)	1496, 1574
BstUI	CGCG	1 cut(s)	798
BstV1I	GCAGC	1 cut(s)	1694
BstV2I	GAAGAC	2 cut(s)	929, 1596
BstX2I	RGATCY	3 cut(s)	638, 1313, 1894
BstYI	RGATCY	3 cut(s)	638, 1313, 1894
BstZ17I	GTATAC	2 cut(s)	74, 691
Bsu15I	ATCGAT	1 cut(s)	202
BsuI	GTATCC	1 cut(s)	558
BsuRI	GGCC	3 cut(s)	534, 609, 1848
BsuTUI	ATCGAT	1 cut(s)	202
BtgI	CCRYGG	2 cut(s)	1438, 1446
BtsCI	GGATG	7 cut(s)	359, 521, 1153, 1398, 1434, 1884, 2137
BtsI	GCAGTG	3 cut(s)	871, 1128, 1605
BtsIMutI	CAGTG	5 cut(s)	547, 871, 1128, 1605, 2010
Cac8I	GCNNGC	1 cut(s)	892
CciI	TCATGA	1 cut(s)	1644
Cfr10I	RCCGGY	1 cut(s)	530
Cfr13I	GGNCC	1 cut(s)	1556
ClaI	ATCGAT	1 cut(s)	202
CseI	GACGC	1 cut(s)	839
CsiI	ACCWGGT	1 cut(s)	929
Csp6I	GTAC	4 cut(s)	57, 126, 220, 1137
CviQI	GTAC	4 cut(s)	57, 126, 220, 1137
DraIII	CACNNNGTG	1 cut(s)	933
DriI	GACNNNNNGTC	1 cut(s)	670
Eam1104I	CTCTTC	2 cut(s)	47, 2060
Eam1105I	GACNNNNNGTC	1 cut(s)	670
EarI	CTCTTC	2 cut(s)	47, 2060
EciI	GGCGGA	1 cut(s)	1848
Ecl136II	GAGCTC	1 cut(s)	706
Eco130I	CCWWGG	3 cut(s)	310, 610, 1438
Eco147I	AGGCCT	1 cut(s)	1848
Eco24I	GRGCYC	3 cut(s)	708, 1286, 2055
Eco47I	GGWCC	1 cut(s)	1556
Eco53kI	GAGCTC	1 cut(s)	706
Eco57I	CTGAAG	1 cut(s)	2208
Eco88I	CYCGRG	2 cut(s)	286, 1842
EcoICRI	GAGCTC	1 cut(s)	706
EcoRI	GAATTC	1 cut(s)	1640
EcoRII	CCWGG	3 cut(s)	184, 499, 929
EcoT14I	CCWWGG	3 cut(s)	310, 610, 1438
EcoT38I	GRGCYC	3 cut(s)	708, 1286, 2055
ErhI	CCWWGG	3 cut(s)	310, 610, 1438
FaqI	GGGAC	3 cut(s)	533, 1969, 2026
FauI	CCCGC	1 cut(s)	1323
FauNDI	CATATG	1 cut(s)	2017
FbaI	TGATCA	1 cut(s)	280
FblI	GTMKAC	2 cut(s)	73, 690
Fnu4HI	GCNGC	1 cut(s)	1708
FokI	GGATG	7 cut(s)	346, 528, 1160, 1385, 1421, 1871, 2124
FriOI	GRGCYC	3 cut(s)	708, 1286, 2055
Fsp4HI	GCNGC	1 cut(s)	1708
FspBI	CTAG	8 cut(s)	306, 557, 1317, 1382, 1872, 1919, 1962, 2162
GluI	GCNGC	1 cut(s)	1708
GsaI	CCCAGC	1 cut(s)	1541
GsuI	CTGGAG	2 cut(s)	174, 1658
HaeIII	GGCC	3 cut(s)	534, 609, 1848
HapII	CCGG	2 cut(s)	531, 1049
HgaI	GACGC	1 cut(s)	839
HindIII	AAGCTT	3 cut(s)	160, 1694, 1759
HpaII	CCGG	2 cut(s)	531, 1049
HphI	GGTGA	1 cut(s)	1274
Hpy166II	GTNNAC	6 cut(s)	74, 618, 691, 805, 927, 990
Hpy8I	GTNNAC	6 cut(s)	74, 618, 691, 805, 927, 990
HpyAV	CCTTC	9 cut(s)	59, 1151, 1296, 1538, 1577, 1709, 1859, 2168, 2183
HpyCH4III	ACNGT	6 cut(s)	91, 542, 1097, 1345, 2005, 2245
HpyCH4IV	ACGT	3 cut(s)	207, 923, 1574
HpyCH4V	TGCA	9 cut(s)	258, 760, 851, 864, 890, 908, 960, 1122, 1128
HpySE526I	ACGT	3 cut(s)	207, 923, 1574
Ksp22I	TGATCA	1 cut(s)	280
LguI	GCTCTTC	1 cut(s)	2060
LmnI	GCTCC	4 cut(s)	290, 711, 817, 2234
Lsp1109I	GCAGC	1 cut(s)	1694
LweI	GCATC	3 cut(s)	917, 1827, 2246
MabI	ACCWGGT	1 cut(s)	929
MaeI	CTAG	8 cut(s)	306, 557, 1317, 1382, 1872, 1919, 1962, 2162
MaeII	ACGT	3 cut(s)	207, 923, 1574
MaeIII	GTNAC	4 cut(s)	485, 827, 1262, 2250
MflI	RGATCY	3 cut(s)	638, 1313, 1894
MhlI	GDGCHC	7 cut(s)	708, 716, 741, 1286, 1496, 1574, 2055
MlyI	GAGTC	3 cut(s)	419, 443, 2170
MmeI	TCCRAC	2 cut(s)	387, 839
MroXI	GAANNNNTTC	1 cut(s)	9
MseI	TTAA	5 cut(s)	93, 524, 1733, 1899, 2154
MslI	CAYNNNNRTG	4 cut(s)	995, 1037, 1370, 1598
MspA1I	CMGCKG	2 cut(s)	152, 1988
MspI	CCGG	2 cut(s)	531, 1049
MspR9I	CCNGG	4 cut(s)	186, 501, 931, 1050
Mva1269I	GAATGC	1 cut(s)	1967
MvaI	CCWGG	3 cut(s)	186, 501, 931
MvnI	CGCG	1 cut(s)	798
NciI	CCSGG	1 cut(s)	1050
NcoI	CCATGG	1 cut(s)	1438
NdeI	CATATG	1 cut(s)	2017
NlaIV	GGNNCC	4 cut(s)	574, 1444, 1495, 2230
NmuCI	GTSAC	4 cut(s)	485, 827, 1262, 2250
NspI	RCATGY	4 cut(s)	894, 1069, 1750, 2171
NspV	TTCGAA	1 cut(s)	194
OliI	CACNNNNGTG	2 cut(s)	995, 1037
PaeI	GCATGC	1 cut(s)	894
PaeR7I	CTCGAG	1 cut(s)	1842
PagI	TCATGA	1 cut(s)	1644
PceI	AGGCCT	1 cut(s)	1848
PciI	ACATGT	2 cut(s)	1065, 2167
PciSI	GCTCTTC	1 cut(s)	2060
PcsI	WCGNNNNNNNCGW	1 cut(s)	208
PctI	GAATGC	1 cut(s)	1967
PdmI	GAANNNNTTC	1 cut(s)	9
PfeI	GAWTC	7 cut(s)	174, 199, 298, 725, 872, 1868, 2261
PkrI	GCNGC	1 cut(s)	1709
PleI	GAGTC	3 cut(s)	418, 443, 2170
PpsI	GAGTC	3 cut(s)	418, 443, 2170
Ppu21I	YACGTR	1 cut(s)	208
PscI	ACATGT	2 cut(s)	1065, 2167
PsiI	TTATAA	2 cut(s)	837, 1533
Psp124BI	GAGCTC	1 cut(s)	708
Psp6I	CCWGG	3 cut(s)	184, 499, 929
PspFI	CCCAGC	1 cut(s)	1537
PspGI	CCWGG	3 cut(s)	184, 499, 929
PspN4I	GGNNCC	4 cut(s)	574, 1444, 1495, 2230
PspPI	GGNCC	1 cut(s)	1556
PspXI	VCTCGAGB	1 cut(s)	1842
PstI	CTGCAG	2 cut(s)	866, 1124
PsuI	RGATCY	3 cut(s)	638, 1313, 1894
PvuII	CAGCTG	1 cut(s)	152
RsaI	GTAC	4 cut(s)	58, 127, 221, 1138
RsaNI	GTAC	4 cut(s)	57, 126, 220, 1137
RseI	CAYNNNNRTG	4 cut(s)	995, 1037, 1370, 1598
SacI	GAGCTC	1 cut(s)	708
SapI	GCTCTTC	1 cut(s)	2060
SaqAI	TTAA	5 cut(s)	93, 524, 1733, 1899, 2154
SatI	GCNGC	1 cut(s)	1708
Sau96I	GGNCC	1 cut(s)	1556
SchI	GAGTC	3 cut(s)	419, 443, 2170
ScrFI	CCNGG	4 cut(s)	186, 501, 931, 1050
SduI	GDGCHC	7 cut(s)	708, 716, 741, 1286, 1496, 1574, 2055
SexAI	ACCWGGT	1 cut(s)	929
SfaNI	GCATC	3 cut(s)	917, 1827, 2246
SfcI	CTRYAG	3 cut(s)	862, 1120, 2077
Sfr274I	CTCGAG	1 cut(s)	1842
SfuI	TTCGAA	1 cut(s)	194
SinI	GGWCC	1 cut(s)	1556
SlaI	CTCGAG	1 cut(s)	1842
SmiMI	CAYNNNNRTG	4 cut(s)	995, 1037, 1370, 1598
SmlI	CTYRAG	2 cut(s)	1088, 1842
SmoI	CTYRAG	2 cut(s)	1088, 1842
SpeI	ACTAGT	1 cut(s)	556
SphI	GCATGC	1 cut(s)	894
SseBI	AGGCCT	1 cut(s)	1848
SsiI	CCGC	4 cut(s)	846, 1330, 1833, 1988
SspMI	CTAG	8 cut(s)	306, 557, 1317, 1382, 1872, 1919, 1962, 2162
SstI	GAGCTC	1 cut(s)	708
StuI	AGGCCT	1 cut(s)	1848
StyD4I	CCNGG	4 cut(s)	184, 499, 929, 1048
StyI	CCWWGG	3 cut(s)	310, 610, 1438
TaaI	ACNGT	6 cut(s)	91, 542, 1097, 1345, 2005, 2245
TaiI	ACGT	3 cut(s)	210, 926, 1577
TaqI	TCGA	3 cut(s)	194, 202, 1843
TatI	WGTACW	1 cut(s)	1136
TfiI	GAWTC	7 cut(s)	174, 199, 298, 725, 872, 1868, 2261
Tru1I	TTAA	5 cut(s)	93, 524, 1733, 1899, 2154
Tru9I	TTAA	5 cut(s)	93, 524, 1733, 1899, 2154
TscAI	CASTG	5 cut(s)	547, 871, 1135, 1605, 2010
TseFI	GTSAC	4 cut(s)	485, 827, 1262, 2250
TseI	GCWGC	1 cut(s)	1707
Tsp45I	GTSAC	4 cut(s)	485, 827, 1262, 2250
TspGWI	ACGGA	2 cut(s)	1463, 1526
TspRI	CASTG	5 cut(s)	547, 871, 1135, 1605, 2010
VpaK11BI	GGWCC	1 cut(s)	1556
XapI	RAATTY	4 cut(s)	418, 913, 1481, 1640
XbaI	TCTAGA	1 cut(s)	1871
XceI	RCATGY	4 cut(s)	894, 1069, 1750, 2171
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1759
XhoI	CTCGAG	1 cut(s)	1842
XmiI	GTMKAC	2 cut(s)	73, 690
XmnI	GAANNNNTTC	1 cut(s)	9
XspI	CTAG	8 cut(s)	306, 557, 1317, 1382, 1872, 1919, 1962, 2162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.