Rorug06G0270800

Serine-rich protein-related

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001520
Physical Location & Seq
Forward (+)
41820533 .. 41831942
11410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0270800.1

Sequence Viewer

Length: 2271 bp
ATGTCGGAAAAACAATCTCTGAATGGAGATGAAATTGTTGTGGAAGTTGAAAGCGAAGAGAGCAATGAAGCAAAGCGGACTTGTTCAAAAGGCTCAGAATCTTCAGCTCCCAAGCAAATCAGTCAAGTGGAATTGCAGGAGTCTGGTCCCGGCTTTCCTCCATCAGATATATCCTGGCTTAACCCCACTAATCCCCCCATGATACCCGCCCTCAATGAGACCCTCACTAGGAGAAAGTCCTTGCAGAGATTAGCTTACTCTAAACCCAAGTCACGATTTGGTGAACTACCATATCACGCTTATTTGGATATGTTACTTGAAGACACTAGTAGTTTAGATGAGCAGGTTGGTGCAAGTTTTCATGGTAATAGCGGCTCATTCACTAGGACTGTCTCCAGCAGTTCTTCCAAGTCCCCAGAGATGCTGTCTCCGGAGAGGCCGAAGAATAAGGATAAAAAGCTCTACAAGAAGGCTAAATTGCTGTCTCCGGAGAGGCTGAAGTATAAGGATAAAGAACTCTACAAGAAGGCTAAATTGAATAGAGATAAGCAGTGGAAAGCATTTAACAAGAAGATCTTGATTAAGCCGACTGTTTTTCTGTGCATTTTGGTTTGTTTAGTGGCTAGCTTCACTTATGAGAAACTAAAGAATCTTATGGTTTGGGGATTGGGGATTTGGAAATGGTGTGTGCTTGTAATGGTGATGTACTGTGGCGTGTTTATTGCGAATTGGTTTATGCGGTTTTTAATTTTTATGATTGAGACGAAGTTCTTGCTTAGGAAACAGAAGGTGTTGTATTGTATTCAAGGAATGGAGGAGAGTGCTCGGGTTTTCATATGGTTGGGTTTGGTTCTTCTCACATGGCTACTCCTGTTCAACCATGGGGTTGAGATTGAGCGATCAAAGACTTGCACCAGGATTTTGCATTATGTTTTGTGGACTCTTGTTTCTGTTCTCGTTGGGGCATTTTTGTGGCTGTTAAAAACTCTTCTGCTTACTTTCTTAGCATTTGATTTCCAATCATACACCTTCTTTGATAGAATCCAAGAATCAATCTTCCATCAGTACGTTCTTCAGACCCTTTCAGGCAATCCACTACCAGACAAAGCACGGTCACAGACACTAAATTTCATGACGACACACAGAAACAATATTGCTGAGAGCGAGAAACAGGCCATTGATATGGGAGACCTTCAAAAGATGAAACAAAAGAAGGTTTCACCTTGGACCATGAAGGTATTGGTAGATGCAGTTTCTACTTCTGGGTTATCCACTATGTCCCATACATTCAATGATTGGAAAGATGCAGCGGATGAAGGGAAATATAAGAAGATTACCAGTGAGATAGAAGCAGCTACTGCTGCCTATCATATTTTTAGGAACGTTGCTGAGCCTTCCAAGTACATTCACGAGTCGGACCTTTTGAAGTTCATGACTAAGGAAGAGGTGAAGCTTGTGTGGCCGCTGATTGACGTAGCAAAGACTGGACAAATTGGCAAAAATGATTTAACAGATTACGTGGTAAAGGCCTACAAAGATCGCGAAGCATTAGCTTATGCTTTACAAGACACCAAAACAGCTGAAAAGCAATTTGACAGACTTGTGACTGGCATCCTGATTGTTATTACCGTTATAGTGTGGCTTCTATTGTTGGAAATTGCGAACACCAAAGTACTTGTTTTACTCTCATCACAGATCGTATTAGCAGCTTTTATGTTCGGAAACACATGCAAGAATATATTTGAAGCTATCGTCTTTGTATTTGTAATACATCCGTTTGATGTTGGTGACCGCTGTGTTGTTGATGACGTTCCGTTGATAGTTGAGGAGATGAACATCTTTACTACAGTCTTCTTGAAGTCTAACAATGAGAAGGTATACTATCCGAATTCAGTTTTATCCACAAAAACCATCAACAATTATTACAGAAGTTCAGATATGAAAGATACTGTGGAGTTCTCGATTGCTTTGACACCTGTGGAGAAGATAGTCAAGCTCAAAGAGAGAATTAAGGAGTATTTGGAGAGGAACCCTCAGTATTGGCATCCAAAGCATAATGTGGCGGTGATCGATTTCGAAGATGTGAACAAGTTAAAGATGGCAGTGTATTTTCATCACACTATGAACTTTCAAGAATTTGAAGAAAAGAATGTGCGCAGAGCCGAGCTAGTTTTCGAATTGCTGAAAATTCTTGAAGAGCTAAATATCACATACTCTATGCCGCCCCAAGAAGTCCACCTCAAAACTAAATCAGAAGCAATTGCTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

756

Amino Acids

87.14

Weight (kDa)

8.78

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MS_channel_2nd PF00924 577 - 642 3.1e-09 Mechanosensitive ion channel, beta-domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2156
Acc36I ACCTGC 1 cut(s) 334
AccI GTMKAC 1 cut(s) 1878
AccII CGCG 1 cut(s) 1542
AccIII TCCGGA 2 cut(s) 430, 487
AciI CCGC 9 cut(s) 76, 207, 372, 739, 1310, 1463, 1792, 2063, 2222
AclI AACGTT 1 cut(s) 1383
AcoI YGGCCR 1 cut(s) 1460
AcsI RAATTY 4 cut(s) 1126, 1888, 2135, 2187
AcuI CTGAAG 3 cut(s) 87, 518, 1058
AfaI GTAC 4 cut(s) 707, 1067, 1403, 1674
AfiI CCNNNNNNNGG 1 cut(s) 228
AhlI ACTAGT 1 cut(s) 326
AjnI CCWGG 2 cut(s) 173, 914
Alw21I GWGCWC 1 cut(s) 826
Alw26I GTCTC 6 cut(s) 212, 397, 432, 489, 755, 1182
AlwNI CAGNNNCTG 1 cut(s) 1358
Ama87I CYCGRG 1 cut(s) 825
Aor13HI TCCGGA 2 cut(s) 430, 487
AoxI GGCC 4 cut(s) 437, 1173, 1460, 1527
ApeKI GCWGC 5 cut(s) 1307, 1352, 1361, 1706, 2264
ApoI RAATTY 4 cut(s) 1126, 1888, 2135, 2187
AspLEI GCGC 1 cut(s) 2157
AspS9I GGNCC 3 cut(s) 146, 1227, 1417
AsuC2I CCSGG 1 cut(s) 150
AsuHPI GGTGA 6 cut(s) 293, 712, 1212, 1459, 1799, 2077
AsuII TTCGAA 2 cut(s) 2076, 2175
AsuNHI GCTAGC 1 cut(s) 623
AvaI CYCGRG 1 cut(s) 825
AvaII GGWCC 3 cut(s) 146, 1227, 1417
BauI CACGAG 1 cut(s) 1409
BbsI GAAGAC 2 cut(s) 327, 1843
Bbv12I GWGCWC 1 cut(s) 826
BbvI GCAGC 5 cut(s) 1319, 1348, 1364, 1718, 2251
BccI CCATC 4 cut(s) 169, 1068, 1919, 2092
BcgI CGANNNNNNTGC 2 cut(s) 754, 788
BciT130I CCWGG 2 cut(s) 175, 916
BcnI CCSGG 1 cut(s) 150
BcoDI GTCTC 6 cut(s) 212, 397, 432, 489, 755, 1182
BcuI ACTAGT 1 cut(s) 326
BfaI CTAG 5 cut(s) 228, 327, 384, 624, 2168
BfmI CTRYAG 1 cut(s) 1845
BfuAI ACCTGC 1 cut(s) 334
BglII AGATCT 1 cut(s) 573
BisI GCNGC 8 cut(s) 373, 1308, 1353, 1362, 1463, 1707, 2222, 2265
BlpI GCTNAGC 1 cut(s) 1389
BlsI GCNGC 8 cut(s) 374, 1309, 1354, 1363, 1464, 1708, 2223, 2266
BmcAI AGTACT 1 cut(s) 1674
Bme1390I CCNGG 3 cut(s) 150, 175, 916
Bme18I GGWCC 3 cut(s) 146, 1227, 1417
BmeT110I CYCGRG 1 cut(s) 825
BmgT120I GGNCC 3 cut(s) 146, 1227, 1417
BmiI GGNNCC 2 cut(s) 148, 2030
BmrFI CCNGG 3 cut(s) 150, 175, 916
BmsI GCATC 5 cut(s) 411, 1237, 1294, 1620, 2053
BmtI GCTAGC 1 cut(s) 627
BpiI GAAGAC 2 cut(s) 327, 1843
BplI GAGNNNNNCTC 2 cut(s) 2017, 2049
BpmI CTGGAG 1 cut(s) 379
Bpu10I CCTNAGC 1 cut(s) 776
Bpu1102I GCTNAGC 1 cut(s) 1389
Bpu14I TTCGAA 2 cut(s) 2076, 2175
BpuMI CCSGG 1 cut(s) 150
Bsa29I ATCGAT 1 cut(s) 2070
BsaAI YACGTR 1 cut(s) 1519
BsaBI GATNNNNATC 1 cut(s) 1835
BsaI GGTCTC 2 cut(s) 212, 1182
BsaJI CCNNGG 2 cut(s) 880, 1223
BsaWI WCCGGW 2 cut(s) 430, 487
Bsc4I CCNNNNNNNGG 1 cut(s) 228
Bse1I ACTGG 3 cut(s) 1338, 1489, 1612
Bse3DI GCAATG 1 cut(s) 70
Bse8I GATNNNNATC 1 cut(s) 1835
BseAI TCCGGA 2 cut(s) 430, 487
BseBI CCWGG 2 cut(s) 175, 916
BseCI ATCGAT 1 cut(s) 2070
BseDI CCNNGG 2 cut(s) 880, 1223
BseGI GGATG 4 cut(s) 1318, 1611, 1771, 2044
BseJI GATNNNNATC 1 cut(s) 1835
BseLI CCNNNNNNNGG 1 cut(s) 228
BseMI GCAATG 1 cut(s) 70
BseMII CTCAG 4 cut(s) 108, 1149, 1380, 2048
BseNI ACTGG 3 cut(s) 1338, 1489, 1612
BseRI GAGGAG 2 cut(s) 830, 1841
BseXI GCAGC 5 cut(s) 1319, 1348, 1364, 1718, 2251
Bsh1236I CGCG 1 cut(s) 1542
BshFI GGCC 4 cut(s) 439, 1175, 1462, 1529
BshVI ATCGAT 1 cut(s) 2070
BsiHKAI GWGCWC 1 cut(s) 826
BsiHKCI CYCGRG 1 cut(s) 825
BsiSI CCGG 3 cut(s) 150, 431, 488
BslFI GGGAC 3 cut(s) 132, 397, 1264
BslI CCNNNNNNNGG 1 cut(s) 228
BsmAI GTCTC 6 cut(s) 212, 397, 432, 489, 755, 1182
BsmBI CGTCTC 1 cut(s) 755
BsmFI GGGAC 3 cut(s) 132, 397, 1264
BsnI GGCC 4 cut(s) 439, 1175, 1462, 1529
Bso31I GGTCTC 2 cut(s) 212, 1182
BsoBI CYCGRG 1 cut(s) 825
Bsp119I TTCGAA 2 cut(s) 2076, 2175
Bsp1286I GDGCHC 1 cut(s) 826
Bsp13I TCCGGA 2 cut(s) 430, 487
Bsp143I GATC 5 cut(s) 573, 899, 1537, 1695, 2067
Bsp1720I GCTNAGC 1 cut(s) 1389
Bsp19I CCATGG 1 cut(s) 880
Bsp68I TCGCGA 1 cut(s) 1542
BspACI CCGC 9 cut(s) 76, 207, 372, 739, 1310, 1463, 1792, 2063, 2222
BspANI GGCC 4 cut(s) 439, 1175, 1462, 1529
BspCNI CTCAG 4 cut(s) 107, 1150, 1381, 2047
BspDI ATCGAT 1 cut(s) 2070
BspEI TCCGGA 2 cut(s) 430, 487
BspFNI CGCG 1 cut(s) 1542
BspHI TCATGA 2 cut(s) 1131, 1431
BspLI GGNNCC 2 cut(s) 148, 2030
BspMI ACCTGC 1 cut(s) 334
BspOI GCTAGC 1 cut(s) 627
BspQI GCTCTTC 1 cut(s) 2190
BspT104I TTCGAA 2 cut(s) 2076, 2175
BspTNI GGTCTC 2 cut(s) 212, 1182
BsrDI GCAATG 1 cut(s) 70
BsrI ACTGG 3 cut(s) 1338, 1489, 1612
BssECI CCNNGG 2 cut(s) 880, 1223
BssMI GATC 5 cut(s) 573, 899, 1537, 1695, 2067
BssNAI GTATAC 1 cut(s) 1879
BssSI CACGAG 1 cut(s) 1409
BssT1I CCWWGG 2 cut(s) 880, 1223
Bst1107I GTATAC 1 cut(s) 1879
Bst2BI CACGAG 1 cut(s) 1409
Bst2UI CCWGG 2 cut(s) 175, 916
Bst4CI ACNGT 7 cut(s) 391, 592, 710, 1113, 1630, 1849, 1951
Bst6I CTCTTC 4 cut(s) 51, 993, 1437, 2190
BstAPI GCANNNNNTGC 2 cut(s) 1358, 2264
BstBAI YACGTR 1 cut(s) 1519
BstBI TTCGAA 2 cut(s) 2076, 2175
BstC8I GCNNGC 1 cut(s) 625
BstDEI CTNAG 7 cut(s) 94, 776, 1003, 1158, 1389, 1437, 2034
BstDSI CCRYGG 1 cut(s) 880
BstEII GGTNACC 1 cut(s) 1787
BstF5I GGATG 4 cut(s) 1318, 1611, 1771, 2044
BstFNI CGCG 1 cut(s) 1542
BstHHI GCGC 1 cut(s) 2157
BstKTI GATC 5 cut(s) 576, 902, 1540, 1698, 2070
BstMAI GTCTC 6 cut(s) 212, 397, 432, 489, 755, 1182
BstMBI GATC 5 cut(s) 573, 899, 1537, 1695, 2067
BstMWI GCNNNNNNNGC 6 cut(s) 60, 1358, 1361, 1459, 2050, 2264
BstNI CCWGG 2 cut(s) 175, 916
BstNSI RCATGY 1 cut(s) 1731
BstPI GGTNACC 1 cut(s) 1787
BstSCI CCNGG 3 cut(s) 148, 173, 914
BstSFI CTRYAG 1 cut(s) 1845
BstUI CGCG 1 cut(s) 1542
BstV1I GCAGC 5 cut(s) 1319, 1348, 1364, 1718, 2251
BstV2I GAAGAC 2 cut(s) 327, 1843
BstX2I RGATCY 1 cut(s) 573
BstXI CCANNNNNNTGG 1 cut(s) 1183
BstYI RGATCY 1 cut(s) 573
BstZ17I GTATAC 1 cut(s) 1879
Bsu15I ATCGAT 1 cut(s) 2070
BsuRI GGCC 4 cut(s) 439, 1175, 1462, 1529
BsuTUI ATCGAT 1 cut(s) 2070
BtgI CCRYGG 1 cut(s) 880
BtsCI GGATG 4 cut(s) 1318, 1611, 1771, 2044
BtsI GCAGTG 2 cut(s) 557, 2109
BtsIMutI CAGTG 3 cut(s) 557, 1345, 2109
BtuMI TCGCGA 1 cut(s) 1542
BveI ACCTGC 1 cut(s) 334
Cac8I GCNNGC 1 cut(s) 625
CaiI CAGNNNCTG 1 cut(s) 1358
CciI TCATGA 2 cut(s) 1131, 1431
CfoI GCGC 1 cut(s) 2157
Cfr13I GGNCC 3 cut(s) 146, 1227, 1417
ClaI ATCGAT 1 cut(s) 2070
Csp6I GTAC 4 cut(s) 706, 1066, 1402, 1673
CviAII CATG 8 cut(s) 199, 362, 861, 881, 1132, 1231, 1432, 1728
CviQI GTAC 4 cut(s) 706, 1066, 1402, 1673
DdeI CTNAG 7 cut(s) 94, 776, 1003, 1158, 1389, 1437, 2034
DpnI GATC 5 cut(s) 575, 901, 1539, 1697, 2069
DpnII GATC 5 cut(s) 573, 899, 1537, 1695, 2067
EaeI YGGCCR 1 cut(s) 1460
Eam1104I CTCTTC 4 cut(s) 51, 993, 1437, 2190
EarI CTCTTC 4 cut(s) 51, 993, 1437, 2190
Eco130I CCWWGG 2 cut(s) 880, 1223
Eco147I AGGCCT 1 cut(s) 1529
Eco31I GGTCTC 2 cut(s) 212, 1182
Eco47I GGWCC 3 cut(s) 146, 1227, 1417
Eco57I CTGAAG 3 cut(s) 87, 518, 1058
Eco88I CYCGRG 1 cut(s) 825
Eco91I GGTNACC 1 cut(s) 1787
EcoO65I GGTNACC 1 cut(s) 1787
EcoRI GAATTC 1 cut(s) 1888
EcoRII CCWGG 2 cut(s) 173, 914
EcoT14I CCWWGG 2 cut(s) 880, 1223
ErhI CCWWGG 2 cut(s) 880, 1223
Esp3I CGTCTC 1 cut(s) 755
FaeI CATG 8 cut(s) 202, 365, 864, 884, 1135, 1234, 1435, 1731
FalI AAGNNNNNCTT 2 cut(s) 560, 592
FaqI GGGAC 3 cut(s) 132, 397, 1264
FatI CATG 8 cut(s) 198, 361, 860, 880, 1131, 1230, 1431, 1727
FauI CCCGC 1 cut(s) 214
FauNDI CATATG 1 cut(s) 836
FblI GTMKAC 1 cut(s) 1878
Fnu4HI GCNGC 8 cut(s) 373, 1308, 1353, 1362, 1463, 1707, 2222, 2265
FokI GGATG 4 cut(s) 1325, 1598, 1758, 2031
Fsp4HI GCNGC 8 cut(s) 373, 1308, 1353, 1362, 1463, 1707, 2222, 2265
FspBI CTAG 5 cut(s) 228, 327, 384, 624, 2168
FspI TGCGCA 1 cut(s) 2156
GlaI GCGC 1 cut(s) 2156
GluI GCNGC 8 cut(s) 373, 1308, 1353, 1362, 1463, 1707, 2222, 2265
GsuI CTGGAG 1 cut(s) 379
HaeIII GGCC 4 cut(s) 439, 1175, 1462, 1529
HapII CCGG 3 cut(s) 150, 431, 488
HhaI GCGC 1 cut(s) 2157
Hin1II CATG 8 cut(s) 202, 365, 864, 884, 1135, 1234, 1435, 1731
Hin6I GCGC 1 cut(s) 2155
HinP1I GCGC 1 cut(s) 2155
HindIII AAGCTT 1 cut(s) 1451
HinfI GANTC 7 cut(s) 98, 140, 649, 940, 1041, 1049, 1412
HpaII CCGG 3 cut(s) 150, 431, 488
HphI GGTGA 6 cut(s) 293, 712, 1212, 1459, 1799, 2077
Hpy166II GTNNAC 5 cut(s) 284, 939, 1879, 2086, 2236
Hpy8I GTNNAC 5 cut(s) 284, 939, 1879, 2086, 2236
HpyCH4III ACNGT 7 cut(s) 391, 592, 710, 1113, 1630, 1849, 1951
HpyCH4IV ACGT 5 cut(s) 1068, 1383, 1473, 1518, 1809
HpyCH4V TGCA 9 cut(s) 136, 244, 353, 603, 912, 925, 1250, 1307, 1731
HpyF10VI GCNNNNNNNGC 6 cut(s) 60, 1358, 1361, 1459, 2050, 2264
HpyF3I CTNAG 7 cut(s) 94, 776, 1003, 1158, 1389, 1437, 2034
HpySE526I ACGT 5 cut(s) 1068, 1383, 1473, 1518, 1809
Hsp92II CATG 8 cut(s) 202, 365, 864, 884, 1135, 1234, 1435, 1731
HspAI GCGC 1 cut(s) 2155
Kpn2I TCCGGA 2 cut(s) 430, 487
Kzo9I GATC 5 cut(s) 573, 899, 1537, 1695, 2067
LguI GCTCTTC 1 cut(s) 2190
LmnI GCTCC 1 cut(s) 112
Lsp1109I GCAGC 5 cut(s) 1319, 1348, 1364, 1718, 2251
LweI GCATC 5 cut(s) 411, 1237, 1294, 1620, 2053
MaeI CTAG 5 cut(s) 228, 327, 384, 624, 2168
MaeII ACGT 5 cut(s) 1068, 1383, 1473, 1518, 1809
MaeIII GTNAC 5 cut(s) 270, 312, 1113, 1603, 1787
MalI GATC 5 cut(s) 575, 901, 1539, 1697, 2069
MboI GATC 5 cut(s) 573, 899, 1537, 1695, 2067
MfeI CAATTG 1 cut(s) 2259
MflI RGATCY 1 cut(s) 573
MhlI GDGCHC 1 cut(s) 826
MlyI GAGTC 3 cut(s) 149, 934, 1421
MmeI TCCRAC 2 cut(s) 1395, 1632
MroI TCCGGA 2 cut(s) 430, 487
MseI TTAA 8 cut(s) 180, 564, 582, 746, 980, 1508, 2010, 2093
MslI CAYNNNNRTG 2 cut(s) 970, 1181
MspA1I CMGCKG 4 cut(s) 1310, 1465, 1580, 1794
MspI CCGG 3 cut(s) 150, 431, 488
MspR9I CCNGG 3 cut(s) 150, 175, 916
MunI CAATTG 1 cut(s) 2259
MvaI CCWGG 2 cut(s) 175, 916
MvnI CGCG 1 cut(s) 1542
MwoI GCNNNNNNNGC 6 cut(s) 60, 1358, 1361, 1459, 2050, 2264
NciI CCSGG 1 cut(s) 150
NcoI CCATGG 1 cut(s) 880
NdeI CATATG 1 cut(s) 836
NdeII GATC 5 cut(s) 573, 899, 1537, 1695, 2067
NheI GCTAGC 1 cut(s) 623
NlaIII CATG 8 cut(s) 202, 365, 864, 884, 1135, 1234, 1435, 1731
NlaIV GGNNCC 2 cut(s) 148, 2030
NmeAIII GCCGAG 1 cut(s) 2188
NmuCI GTSAC 4 cut(s) 270, 1113, 1603, 1787
NruI TCGCGA 1 cut(s) 1542
NsbI TGCGCA 1 cut(s) 2156
NspI RCATGY 1 cut(s) 1731
NspV TTCGAA 2 cut(s) 2076, 2175
PagI TCATGA 2 cut(s) 1131, 1431
PceI AGGCCT 1 cut(s) 1529
PciSI GCTCTTC 1 cut(s) 2190
PfeI GAWTC 4 cut(s) 98, 649, 1041, 1049
PkrI GCNGC 8 cut(s) 374, 1309, 1354, 1363, 1464, 1708, 2223, 2266
PleI GAGTC 3 cut(s) 148, 934, 1420
PpsI GAGTC 3 cut(s) 148, 934, 1420
Ppu21I YACGTR 1 cut(s) 1519
Psp1406I AACGTT 1 cut(s) 1383
Psp6I CCWGG 2 cut(s) 173, 914
PspEI GGTNACC 1 cut(s) 1787
PspGI CCWGG 2 cut(s) 173, 914
PspN4I GGNNCC 2 cut(s) 148, 2030
PspPI GGNCC 3 cut(s) 146, 1227, 1417
PstNI CAGNNNCTG 1 cut(s) 1358
PsuI RGATCY 1 cut(s) 573
PvuII CAGCTG 1 cut(s) 1580
RruI TCGCGA 1 cut(s) 1542
RsaI GTAC 4 cut(s) 707, 1067, 1403, 1674
RsaNI GTAC 4 cut(s) 706, 1066, 1402, 1673
RseI CAYNNNNRTG 2 cut(s) 970, 1181
SapI GCTCTTC 1 cut(s) 2190
SaqAI TTAA 8 cut(s) 180, 564, 582, 746, 980, 1508, 2010, 2093
SatI GCNGC 8 cut(s) 373, 1308, 1353, 1362, 1463, 1707, 2222, 2265
Sau3AI GATC 5 cut(s) 573, 899, 1537, 1695, 2067
Sau96I GGNCC 3 cut(s) 146, 1227, 1417
ScaI AGTACT 1 cut(s) 1674
SchI GAGTC 3 cut(s) 149, 934, 1421
ScrFI CCNGG 3 cut(s) 150, 175, 916
SduI GDGCHC 1 cut(s) 826
SfaNI GCATC 5 cut(s) 411, 1237, 1294, 1620, 2053
SfcI CTRYAG 1 cut(s) 1845
SfuI TTCGAA 2 cut(s) 2076, 2175
SinI GGWCC 3 cut(s) 146, 1227, 1417
SmiMI CAYNNNNRTG 2 cut(s) 970, 1181
SpeI ACTAGT 1 cut(s) 326
SseBI AGGCCT 1 cut(s) 1529
SsiI CCGC 9 cut(s) 76, 207, 372, 739, 1310, 1463, 1792, 2063, 2222
SspI AATATT 1 cut(s) 1153
SspMI CTAG 5 cut(s) 228, 327, 384, 624, 2168
StuI AGGCCT 1 cut(s) 1529
StyD4I CCNGG 3 cut(s) 148, 173, 914
StyI CCWWGG 2 cut(s) 880, 1223
TaaI ACNGT 7 cut(s) 391, 592, 710, 1113, 1630, 1849, 1951
TaiI ACGT 5 cut(s) 1071, 1386, 1476, 1521, 1812
TaqI TCGA 4 cut(s) 1961, 2070, 2076, 2175
TatI WGTACW 3 cut(s) 705, 1401, 1672
TauI GCSGC 3 cut(s) 375, 1465, 2224
TfiI GAWTC 4 cut(s) 98, 649, 1041, 1049
Tru1I TTAA 8 cut(s) 180, 564, 582, 746, 980, 1508, 2010, 2093
Tru9I TTAA 8 cut(s) 180, 564, 582, 746, 980, 1508, 2010, 2093
TscAI CASTG 3 cut(s) 557, 1345, 2109
TseFI GTSAC 4 cut(s) 270, 1113, 1603, 1787
TseI GCWGC 5 cut(s) 1307, 1352, 1361, 1706, 2264
Tsp45I GTSAC 4 cut(s) 270, 1113, 1603, 1787
TspGWI ACGGA 2 cut(s) 1764, 1803
TspRI CASTG 3 cut(s) 557, 1345, 2109
VpaK11BI GGWCC 3 cut(s) 146, 1227, 1417
XapI RAATTY 4 cut(s) 1126, 1888, 2135, 2187
XceI RCATGY 1 cut(s) 1731
XcmI CCANNNNNNNNNTGG 1 cut(s) 1237
XmiI GTMKAC 1 cut(s) 1878
XspI CTAG 5 cut(s) 228, 327, 384, 624, 2168
ZrmI AGTACT 1 cut(s) 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.