Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0357141 |
| rosa_laevigata | RLG00000002011 RLG00000003375 RLG00000004903 RLG00000007386 RLG00000009065 RLG00000009288 RLG00000013868 RLG00000014254 RLG00000014965 RLG00000015454 RLG00000028014 RLG00000029416 RLG00000032950 RLG00000036480 RLG00000037033 |
| rosa_multiflora | Rmu_sc0000227.1_g000012 Rmu_ssc0000361.1_g000010 Rmu_ssc0000420.1_g000021 |
| rosa_roxburghii | Rroxscaffold_1G00008600 Rroxscaffold_1G00017770 Rroxscaffold_2G00103190 Rroxscaffold_7G00160850 |
| rosa_rugosa | Rorug01G0134400.1 Rorug02G0253700 Rorug06G0012400 |
| rosa_samantha | Rh1CG204200 Rh2AG323900 Rh2AG477000 Rh2BG488800 Rh2CG462700 Rh2DG497800 Rh3AG144500 Rh3BG166900 Rh4BG074700 Rh4BG080300 Rh5CG311500 Rh6BG200700 Rh6CG201900 Rh7AG241500 Rh7CG256100 |
| rosa_wichuraiana | Rw6G017170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 27, 341 |
| AcsI | RAATTY | 3 cut(s) | 41, 74, 380 |
| AfaI | GTAC | 1 cut(s) | 152 |
| AgsI | TTSAA | 4 cut(s) | 38, 46, 272, 380 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 288 |
| AluBI | AGCT | 2 cut(s) | 275, 332 |
| AluI | AGCT | 2 cut(s) | 275, 332 |
| AoxI | GGCC | 1 cut(s) | 185 |
| ApoI | RAATTY | 3 cut(s) | 41, 74, 380 |
| AspS9I | GGNCC | 1 cut(s) | 180 |
| AsuC2I | CCSGG | 1 cut(s) | 184 |
| AsuHPI | GGTGA | 2 cut(s) | 139, 292 |
| AvaII | GGWCC | 1 cut(s) | 180 |
| BccI | CCATC | 1 cut(s) | 46 |
| BcnI | CCSGG | 1 cut(s) | 184 |
| BfaI | CTAG | 1 cut(s) | 347 |
| Bme1390I | CCNGG | 1 cut(s) | 184 |
| Bme18I | GGWCC | 1 cut(s) | 180 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 288 |
| BmgT120I | GGNCC | 1 cut(s) | 180 |
| BmiI | GGNNCC | 1 cut(s) | 182 |
| BmrFI | CCNGG | 1 cut(s) | 184 |
| BpuMI | CCSGG | 1 cut(s) | 184 |
| Bse1I | ACTGG | 1 cut(s) | 312 |
| Bse3DI | GCAATG | 1 cut(s) | 303 |
| BseGI | GGATG | 2 cut(s) | 265, 328 |
| BseMI | GCAATG | 1 cut(s) | 303 |
| BseNI | ACTGG | 1 cut(s) | 312 |
| BsgI | GTGCAG | 1 cut(s) | 390 |
| BshFI | GGCC | 1 cut(s) | 187 |
| BsiSI | CCGG | 1 cut(s) | 184 |
| BslFI | GGGAC | 1 cut(s) | 381 |
| BsmFI | GGGAC | 1 cut(s) | 381 |
| BsnI | GGCC | 1 cut(s) | 187 |
| BspANI | GGCC | 1 cut(s) | 187 |
| BspLI | GGNNCC | 1 cut(s) | 182 |
| BsrDI | GCAATG | 1 cut(s) | 303 |
| BsrI | ACTGG | 1 cut(s) | 312 |
| Bst4CI | ACNGT | 3 cut(s) | 236, 286, 372 |
| BstC8I | GCNNGC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 2 cut(s) | 173, 243 |
| BstF5I | GGATG | 2 cut(s) | 265, 328 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 272 |
| BstSCI | CCNGG | 1 cut(s) | 182 |
| BsuRI | GGCC | 1 cut(s) | 187 |
| BtsCI | GGATG | 2 cut(s) | 265, 328 |
| BtsIMutI | CAGTG | 1 cut(s) | 291 |
| Cac8I | GCNNGC | 1 cut(s) | 117 |
| Cfr13I | GGNCC | 1 cut(s) | 180 |
| Csp6I | GTAC | 1 cut(s) | 151 |
| CviAII | CATG | 2 cut(s) | 31, 293 |
| CviJI | RGCY | 5 cut(s) | 172, 187, 275, 332, 389 |
| CviKI_1 | RGCY | 5 cut(s) | 172, 187, 275, 332, 389 |
| CviQI | GTAC | 1 cut(s) | 151 |
| DdeI | CTNAG | 2 cut(s) | 173, 243 |
| DriI | GACNNNNNGTC | 1 cut(s) | 288 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 288 |
| Eco47I | GGWCC | 1 cut(s) | 180 |
| EcoRI | GAATTC | 1 cut(s) | 41 |
| FaeI | CATG | 2 cut(s) | 34, 296 |
| FaiI | YATR | 9 cut(s) | 6, 32, 140, 169, 239, 294, 421, 423, 436 |
| FaqI | GGGAC | 1 cut(s) | 381 |
| FatI | CATG | 2 cut(s) | 30, 292 |
| FauNDI | CATATG | 1 cut(s) | 421 |
| FblI | GTMKAC | 2 cut(s) | 27, 341 |
| FokI | GGATG | 2 cut(s) | 272, 335 |
| FspBI | CTAG | 1 cut(s) | 347 |
| HaeIII | GGCC | 1 cut(s) | 187 |
| HapII | CCGG | 1 cut(s) | 184 |
| Hin1II | CATG | 2 cut(s) | 34, 296 |
| HincII | GTYRAC | 1 cut(s) | 28 |
| HindII | GTYRAC | 1 cut(s) | 28 |
| HinfI | GANTC | 1 cut(s) | 227 |
| HpaII | CCGG | 1 cut(s) | 184 |
| HphI | GGTGA | 2 cut(s) | 139, 292 |
| Hpy166II | GTNNAC | 2 cut(s) | 28, 342 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 46 |
| Hpy8I | GTNNAC | 2 cut(s) | 28, 342 |
| HpyAV | CCTTC | 1 cut(s) | 419 |
| HpyCH4III | ACNGT | 3 cut(s) | 236, 286, 372 |
| HpyCH4IV | ACGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 4 cut(s) | 69, 296, 355, 407 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 272 |
| HpyF3I | CTNAG | 2 cut(s) | 173, 243 |
| HpySE526I | ACGT | 1 cut(s) | 196 |
| Hsp92II | CATG | 2 cut(s) | 34, 296 |
| LmnI | GCTCC | 1 cut(s) | 329 |
| LpnPI | CCDG | 6 cut(s) | 197, 263, 293, 318, 371, 423 |
| MaeI | CTAG | 1 cut(s) | 347 |
| MaeII | ACGT | 1 cut(s) | 196 |
| MaeIII | GTNAC | 2 cut(s) | 280, 300 |
| MboII | GAAGA | 1 cut(s) | 61 |
| MluCI | AATT | 3 cut(s) | 41, 74, 380 |
| MmeI | TCCRAC | 1 cut(s) | 307 |
| MnlI | CCTC | 3 cut(s) | 49, 118, 408 |
| MseI | TTAA | 1 cut(s) | 363 |
| MspI | CCGG | 1 cut(s) | 184 |
| MspR9I | CCNGG | 1 cut(s) | 184 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 272 |
| NciI | CCSGG | 1 cut(s) | 184 |
| NdeI | CATATG | 1 cut(s) | 421 |
| NlaIII | CATG | 2 cut(s) | 34, 296 |
| NlaIV | GGNNCC | 1 cut(s) | 182 |
| NmuCI | GTSAC | 2 cut(s) | 280, 300 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| PspN4I | GGNNCC | 1 cut(s) | 182 |
| PspPI | GGNCC | 1 cut(s) | 180 |
| RsaI | GTAC | 1 cut(s) | 152 |
| RsaNI | GTAC | 1 cut(s) | 151 |
| SalI | GTCGAC | 1 cut(s) | 26 |
| SaqAI | TTAA | 1 cut(s) | 363 |
| Sau96I | GGNCC | 1 cut(s) | 180 |
| ScrFI | CCNGG | 1 cut(s) | 184 |
| SetI | ASST | 5 cut(s) | 129, 199, 277, 334, 419 |
| SinI | GGWCC | 1 cut(s) | 180 |
| Sse9I | AATT | 3 cut(s) | 41, 74, 380 |
| SspMI | CTAG | 1 cut(s) | 347 |
| StyD4I | CCNGG | 1 cut(s) | 182 |
| TaaI | ACNGT | 3 cut(s) | 236, 286, 372 |
| TaiI | ACGT | 1 cut(s) | 199 |
| TaqI | TCGA | 1 cut(s) | 27 |
| TasI | AATT | 3 cut(s) | 41, 74, 380 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| Tru1I | TTAA | 1 cut(s) | 363 |
| Tru9I | TTAA | 1 cut(s) | 363 |
| TscAI | CASTG | 1 cut(s) | 291 |
| TseFI | GTSAC | 2 cut(s) | 280, 300 |
| Tsp45I | GTSAC | 2 cut(s) | 280, 300 |
| TspDTI | ATGAA | 4 cut(s) | 21, 364, 413, 438 |
| TspGWI | ACGGA | 1 cut(s) | 193 |
| TspRI | CASTG | 1 cut(s) | 291 |
| VpaK11BI | GGWCC | 1 cut(s) | 180 |
| XapI | RAATTY | 3 cut(s) | 41, 74, 380 |
| XmiI | GTMKAC | 2 cut(s) | 27, 341 |
| XspI | CTAG | 1 cut(s) | 347 |