Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0357141 |
| rosa_laevigata | RLG00000002011 RLG00000003375 RLG00000004903 RLG00000007386 RLG00000009065 RLG00000009288 RLG00000013868 RLG00000014254 RLG00000014965 RLG00000015454 RLG00000028014 RLG00000029416 RLG00000032950 RLG00000036480 RLG00000037033 |
| rosa_multiflora | Rmu_sc0000227.1_g000012 Rmu_ssc0000361.1_g000010 Rmu_ssc0000420.1_g000021 |
| rosa_roxburghii | Rroxscaffold_1G00008600 Rroxscaffold_1G00017770 Rroxscaffold_2G00103190 Rroxscaffold_7G00160850 |
| rosa_rugosa | Rorug01G0134400.1 Rorug02G0253700 Rorug06G0012400 |
| rosa_samantha | Rh1CG204200 Rh2AG323900 Rh2AG477000 Rh2BG488800 Rh2CG462700 Rh2DG497800 Rh3AG144500 Rh3BG166900 Rh4BG074700 Rh4BG080300 Rh5CG311500 Rh6BG200700 Rh6CG201900 Rh7AG241500 Rh7CG256100 |
| rosa_wichuraiana | Rw6G017170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 231 |
| AcuI | CTGAAG | 1 cut(s) | 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AgsI | TTSAA | 2 cut(s) | 35, 196 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 51 |
| AluBI | AGCT | 3 cut(s) | 38, 102, 259 |
| AluI | AGCT | 3 cut(s) | 38, 102, 259 |
| Alw26I | GTCTC | 1 cut(s) | 153 |
| AsuHPI | GGTGA | 1 cut(s) | 55 |
| BclI | TGATCA | 1 cut(s) | 142 |
| BcoDI | GTCTC | 1 cut(s) | 153 |
| BfaI | CTAG | 1 cut(s) | 260 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 51 |
| BpmI | CTGGAG | 1 cut(s) | 177 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bse1I | ACTGG | 2 cut(s) | 160, 224 |
| Bse3DI | GCAATG | 1 cut(s) | 66 |
| BseGI | GGATG | 1 cut(s) | 28 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseMI | GCAATG | 1 cut(s) | 66 |
| BseNI | ACTGG | 2 cut(s) | 160, 224 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BsmAI | GTCTC | 1 cut(s) | 153 |
| BsmBI | CGTCTC | 1 cut(s) | 153 |
| Bsp143I | GATC | 2 cut(s) | 142, 177 |
| BsrDI | GCAATG | 1 cut(s) | 66 |
| BsrI | ACTGG | 2 cut(s) | 160, 224 |
| BssMI | GATC | 2 cut(s) | 142, 177 |
| Bst4CI | ACNGT | 2 cut(s) | 49, 82 |
| BstC8I | GCNNGC | 1 cut(s) | 100 |
| BstDEI | CTNAG | 1 cut(s) | 6 |
| BstF5I | GGATG | 1 cut(s) | 28 |
| BstKTI | GATC | 2 cut(s) | 145, 180 |
| BstMAI | GTCTC | 1 cut(s) | 153 |
| BstMBI | GATC | 2 cut(s) | 142, 177 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 35 |
| BtsCI | GGATG | 1 cut(s) | 28 |
| BtsIMutI | CAGTG | 1 cut(s) | 54 |
| Cac8I | GCNNGC | 1 cut(s) | 100 |
| CseI | GACGC | 1 cut(s) | 170 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviJI | RGCY | 4 cut(s) | 38, 102, 148, 259 |
| CviKI_1 | RGCY | 4 cut(s) | 38, 102, 148, 259 |
| DdeI | CTNAG | 1 cut(s) | 6 |
| DpnI | GATC | 2 cut(s) | 144, 179 |
| DpnII | GATC | 2 cut(s) | 142, 177 |
| DriI | GACNNNNNGTC | 1 cut(s) | 51 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 51 |
| Eco57I | CTGAAG | 1 cut(s) | 186 |
| Esp3I | CGTCTC | 1 cut(s) | 153 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 2 cut(s) | 122, 135 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 164, 196 |
| FatI | CATG | 1 cut(s) | 133 |
| FbaI | TGATCA | 1 cut(s) | 142 |
| FblI | GTMKAC | 1 cut(s) | 231 |
| FokI | GGATG | 1 cut(s) | 35 |
| FspBI | CTAG | 1 cut(s) | 260 |
| GsuI | CTGGAG | 1 cut(s) | 177 |
| HgaI | GACGC | 1 cut(s) | 170 |
| Hin1II | CATG | 1 cut(s) | 137 |
| HincII | GTYRAC | 3 cut(s) | 85, 232, 240 |
| HindII | GTYRAC | 3 cut(s) | 85, 232, 240 |
| HindIII | AAGCTT | 1 cut(s) | 100 |
| HphI | GGTGA | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 4 cut(s) | 85, 232, 240, 250 |
| Hpy188I | TCNGA | 1 cut(s) | 7 |
| Hpy188III | TCNNGA | 1 cut(s) | 215 |
| Hpy8I | GTNNAC | 4 cut(s) | 85, 232, 240, 250 |
| HpyCH4III | ACNGT | 2 cut(s) | 49, 82 |
| HpyCH4IV | ACGT | 1 cut(s) | 242 |
| HpyCH4V | TGCA | 3 cut(s) | 59, 98, 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 35 |
| HpyF3I | CTNAG | 1 cut(s) | 6 |
| HpySE526I | ACGT | 1 cut(s) | 242 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| Ksp22I | TGATCA | 1 cut(s) | 142 |
| Kzo9I | GATC | 2 cut(s) | 142, 177 |
| LmnI | GCTCC | 1 cut(s) | 135 |
| LpnPI | CCDG | 3 cut(s) | 26, 141, 237 |
| MaeI | CTAG | 1 cut(s) | 260 |
| MaeII | ACGT | 1 cut(s) | 242 |
| MaeIII | GTNAC | 2 cut(s) | 43, 63 |
| MalI | GATC | 2 cut(s) | 144, 179 |
| MboI | GATC | 2 cut(s) | 142, 177 |
| MseI | TTAA | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 35 |
| NdeII | GATC | 2 cut(s) | 142, 177 |
| NlaIII | CATG | 1 cut(s) | 137 |
| NmuCI | GTSAC | 2 cut(s) | 43, 63 |
| SalI | GTCGAC | 1 cut(s) | 230 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| Sau3AI | GATC | 2 cut(s) | 142, 177 |
| SetI | ASST | 6 cut(s) | 40, 90, 104, 128, 245, 261 |
| SspMI | CTAG | 1 cut(s) | 260 |
| TaaI | ACNGT | 2 cut(s) | 49, 82 |
| TaiI | ACGT | 1 cut(s) | 245 |
| TaqI | TCGA | 1 cut(s) | 231 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TscAI | CASTG | 1 cut(s) | 54 |
| TseFI | GTSAC | 2 cut(s) | 43, 63 |
| Tsp45I | GTSAC | 2 cut(s) | 43, 63 |
| TspDTI | ATGAA | 1 cut(s) | 234 |
| TspRI | CASTG | 1 cut(s) | 54 |
| XmiI | GTMKAC | 1 cut(s) | 231 |
| XspI | CTAG | 1 cut(s) | 260 |