Rh2DG673200

DUF4210

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
89523349 .. 89525935
2587 bp
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UTR
Exon/CDS
Intron
Rh2DG673200.1

Sequence Viewer

Length: 405 bp
ATGCCGAAAAAGCCCCTTTCACCCAACCCTTACATCCAAGTTGACCACGATTCAGCTTTCGCTACCAAGCCGCTACCAGTACCGTTCGATTTGCCCAAATCTCCGACCTCTGCCGCTCAGAAAATTCCGGTGAAGGTTTGTTCTGTACTTCATTCAGCCTGGATGTTGATGTTGCATGATGAAGACTTGAAAGGATTACTAATTCAAAGAACACAGGTTCTAAGTAATCCTGAAAAGACACCGATTCATACTTTCCTTTGCAACTATGATTTAAGTGACATGCCGGCTGGTACCAAAGATGCTGGACTTTTTTTACCTATACATGGTTCTGCTCCTGATATTGCTGGACAGGTTGGTTTTCCTGCACATCAAATTATCTTGCTCTTGGAGTACAATGCGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

134

Amino Acids

14.65

Weight (kDa)

6.26

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 290
AccB1I GGYRCC 1 cut(s) 290
AccBSI CCGCTC 1 cut(s) 116
AciI CCGC 2 cut(s) 71, 114
AcsI RAATTY 1 cut(s) 123
AfaI GTAC 4 cut(s) 81, 147, 292, 392
AfiI CCNNNNNNNGG 1 cut(s) 323
AgsI TTSAA 2 cut(s) 190, 206
AjnI CCWGG 1 cut(s) 158
AluBI AGCT 1 cut(s) 56
AluI AGCT 1 cut(s) 56
ApoI RAATTY 1 cut(s) 123
Asp718I GGTACC 1 cut(s) 290
AsuHPI GGTGA 2 cut(s) 12, 142
BanI GGYRCC 1 cut(s) 290
BbsI GAAGAC 1 cut(s) 189
BciT130I CCWGG 1 cut(s) 160
BisI GCNGC 2 cut(s) 71, 114
BlsI GCNGC 2 cut(s) 72, 115
Bme1390I CCNGG 1 cut(s) 160
BmiI GGNNCC 1 cut(s) 292
BmrFI CCNGG 1 cut(s) 160
BmsI GCATC 1 cut(s) 289
BpiI GAAGAC 1 cut(s) 189
BsaWI WCCGGW 1 cut(s) 127
Bsc4I CCNNNNNNNGG 1 cut(s) 323
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 1 cut(s) 77
BseBI CCWGG 1 cut(s) 160
BseGI GGATG 2 cut(s) 33, 168
BseLI CCNNNNNNNGG 1 cut(s) 323
BseMII CTCAG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 77
BsgI GTGCAG 1 cut(s) 348
BshNI GGYRCC 1 cut(s) 290
BsiSI CCGG 2 cut(s) 128, 284
BslI CCNNNNNNNGG 1 cut(s) 323
BspACI CCGC 2 cut(s) 71, 114
BspCNI CTCAG 1 cut(s) 130
BspLI GGNNCC 1 cut(s) 292
BspT107I GGYRCC 1 cut(s) 290
BsrBI CCGCTC 1 cut(s) 116
BsrFI RCCGGY 1 cut(s) 283
BsrI ACTGG 1 cut(s) 77
BssAI RCCGGY 1 cut(s) 283
Bst2UI CCWGG 1 cut(s) 160
Bst4CI ACNGT 1 cut(s) 84
BstC8I GCNNGC 1 cut(s) 285
BstDEI CTNAG 2 cut(s) 117, 221
BstF5I GGATG 2 cut(s) 33, 168
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 160
BstNSI RCATGY 1 cut(s) 283
BstSCI CCNGG 1 cut(s) 158
BstV2I GAAGAC 1 cut(s) 189
BtsCI GGATG 2 cut(s) 33, 168
Cac8I GCNNGC 1 cut(s) 285
Cfr10I RCCGGY 1 cut(s) 283
Csp6I GTAC 4 cut(s) 80, 146, 291, 391
CviAII CATG 3 cut(s) 176, 280, 323
CviJI RGCY 5 cut(s) 13, 56, 70, 158, 287
CviKI_1 RGCY 5 cut(s) 13, 56, 70, 158, 287
CviQI GTAC 4 cut(s) 80, 146, 291, 391
DdeI CTNAG 2 cut(s) 117, 221
EcoRII CCWGG 1 cut(s) 158
FaeI CATG 3 cut(s) 179, 283, 326
FaiI YATR 6 cut(s) 177, 249, 267, 281, 320, 324
FatI CATG 3 cut(s) 175, 279, 322
Fnu4HI GCNGC 2 cut(s) 71, 114
FokI GGATG 2 cut(s) 20, 175
Fsp4HI GCNGC 2 cut(s) 71, 114
GluI GCNGC 2 cut(s) 71, 114
HapII CCGG 2 cut(s) 128, 284
Hin1II CATG 3 cut(s) 179, 283, 326
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HinfI GANTC 2 cut(s) 50, 244
HpaII CCGG 2 cut(s) 128, 284
HphI GGTGA 2 cut(s) 12, 142
Hpy166II GTNNAC 1 cut(s) 43
Hpy188I TCNGA 2 cut(s) 105, 120
Hpy188III TCNNGA 2 cut(s) 230, 335
Hpy8I GTNNAC 1 cut(s) 43
HpyAV CCTTC 1 cut(s) 127
HpyCH4III ACNGT 1 cut(s) 84
HpyCH4V TGCA 3 cut(s) 175, 261, 365
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 2 cut(s) 117, 221
Hsp92II CATG 3 cut(s) 179, 283, 326
KpnI GGTACC 1 cut(s) 294
KroI GCCGGC 1 cut(s) 283
KroNI GCCGGC 1 cut(s) 285
LmnI GCTCC 1 cut(s) 337
LweI GCATC 1 cut(s) 289
MaeIII GTNAC 1 cut(s) 275
MbiI CCGCTC 1 cut(s) 116
MboII GAAGA 1 cut(s) 194
MluCI AATT 3 cut(s) 123, 201, 372
MmeI TCCRAC 1 cut(s) 128
MnlI CCTC 1 cut(s) 118
MroNI GCCGGC 1 cut(s) 283
MseI TTAA 2 cut(s) 272, 403
MspI CCGG 2 cut(s) 128, 284
MspR9I CCNGG 1 cut(s) 160
MvaI CCWGG 1 cut(s) 160
MwoI GCNNNNNNNGC 1 cut(s) 10
NaeI GCCGGC 1 cut(s) 285
NgoMIV GCCGGC 1 cut(s) 283
NlaIII CATG 3 cut(s) 179, 283, 326
NlaIV GGNNCC 1 cut(s) 292
NmuCI GTSAC 1 cut(s) 275
NspI RCATGY 1 cut(s) 283
PdiI GCCGGC 1 cut(s) 285
PfeI GAWTC 2 cut(s) 50, 244
PkrI GCNGC 2 cut(s) 72, 115
Psp6I CCWGG 1 cut(s) 158
PspGI CCWGG 1 cut(s) 158
PspN4I GGNNCC 1 cut(s) 292
RsaI GTAC 4 cut(s) 81, 147, 292, 392
RsaNI GTAC 4 cut(s) 80, 146, 291, 391
SaqAI TTAA 2 cut(s) 272, 403
SatI GCNGC 2 cut(s) 71, 114
ScrFI CCNGG 1 cut(s) 160
SetI ASST 6 cut(s) 58, 110, 138, 219, 319, 354
SfaNI GCATC 1 cut(s) 289
Sse9I AATT 3 cut(s) 123, 201, 372
SsiI CCGC 2 cut(s) 71, 114
StyD4I CCNGG 1 cut(s) 158
TaaI ACNGT 1 cut(s) 84
TaqI TCGA 1 cut(s) 87
TasI AATT 3 cut(s) 123, 201, 372
TatI WGTACW 2 cut(s) 145, 390
TauI GCSGC 2 cut(s) 73, 116
TfiI GAWTC 2 cut(s) 50, 244
Tru1I TTAA 2 cut(s) 272, 403
Tru9I TTAA 2 cut(s) 272, 403
TseFI GTSAC 1 cut(s) 275
Tsp45I GTSAC 1 cut(s) 275
TspDTI ATGAA 3 cut(s) 140, 195, 236
XapI RAATTY 1 cut(s) 123
XceI RCATGY 1 cut(s) 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.