Rh7AG400700

BRCT domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
52708566 .. 52710845
2280 bp
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UTR
Exon/CDS
Intron
Rh7AG400700.1

Sequence Viewer

Length: 255 bp
ATGCCGAAGAAGCCCCTTTCACCTAACCCTTACATCCAAGCTGACCACGATTCAGCTTTCGCTACCAAGCCGCTACCAGTACCGTTCGATTTGCCCAAATTTCCAACCTCTGCCGCTCAGAACATTTCGGTGAAGATAATGGTTGGTTTAATGGGTGCTCAGTTTTCTAAACCATTGGTGGCAAGCAAAGTCACTCATCTCATTTGCTATAAATTTGAAGCCTCGATTTCCCGGAACACTCGTGTTGGAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

9.14

Weight (kDa)

9.84

Isoelectric Point (pI)

33.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 116
AciI CCGC 2 cut(s) 71, 114
AcsI RAATTY 2 cut(s) 98, 212
AfaI GTAC 1 cut(s) 81
AgsI TTSAA 1 cut(s) 218
AluBI AGCT 2 cut(s) 41, 56
AluI AGCT 2 cut(s) 41, 56
Alw21I GWGCWC 1 cut(s) 160
ApoI RAATTY 2 cut(s) 98, 212
AsuC2I CCSGG 1 cut(s) 232
AsuHPI GGTGA 2 cut(s) 12, 142
BauI CACGAG 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 160
BcnI CCSGG 1 cut(s) 232
BisI GCNGC 2 cut(s) 71, 114
BlsI GCNGC 2 cut(s) 72, 115
Bme1390I CCNGG 1 cut(s) 232
BmrFI CCNGG 1 cut(s) 232
BpuMI CCSGG 1 cut(s) 232
Bse1I ACTGG 1 cut(s) 77
BseGI GGATG 1 cut(s) 33
BseMII CTCAG 2 cut(s) 131, 173
BseNI ACTGG 1 cut(s) 77
BsiHKAI GWGCWC 1 cut(s) 160
BsiSI CCGG 1 cut(s) 232
Bsp1286I GDGCHC 1 cut(s) 160
BspACI CCGC 2 cut(s) 71, 114
BspCNI CTCAG 2 cut(s) 130, 172
BsrBI CCGCTC 1 cut(s) 116
BsrI ACTGG 1 cut(s) 77
BssSI CACGAG 1 cut(s) 240
Bst2BI CACGAG 1 cut(s) 240
Bst4CI ACNGT 1 cut(s) 84
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 2 cut(s) 117, 159
BstF5I GGATG 1 cut(s) 33
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstSCI CCNGG 1 cut(s) 230
BtsCI GGATG 1 cut(s) 33
Cac8I GCNNGC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 80
CviJI RGCY 5 cut(s) 13, 41, 56, 70, 221
CviKI_1 RGCY 5 cut(s) 13, 41, 56, 70, 221
CviQI GTAC 1 cut(s) 80
DdeI CTNAG 2 cut(s) 117, 159
FaiI YATR 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 71, 114
FokI GGATG 1 cut(s) 20
Fsp4HI GCNGC 2 cut(s) 71, 114
GluI GCNGC 2 cut(s) 71, 114
HapII CCGG 1 cut(s) 232
HinfI GANTC 1 cut(s) 50
HpaII CCGG 1 cut(s) 232
HphI GGTGA 2 cut(s) 12, 142
Hpy188I TCNGA 1 cut(s) 120
HpyCH4III ACNGT 1 cut(s) 84
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 2 cut(s) 117, 159
LpnPI CCDG 2 cut(s) 90, 245
MaeIII GTNAC 1 cut(s) 190
MbiI CCGCTC 1 cut(s) 116
MboII GAAGA 2 cut(s) 19, 145
MhlI GDGCHC 1 cut(s) 160
MluCI AATT 2 cut(s) 98, 212
MmeI TCCRAC 2 cut(s) 128, 226
MnlI CCTC 2 cut(s) 118, 232
MseI TTAA 1 cut(s) 149
MslI CAYNNNNRTG 1 cut(s) 128
MspI CCGG 1 cut(s) 232
MspR9I CCNGG 1 cut(s) 232
MwoI GCNNNNNNNGC 1 cut(s) 10
NciI CCSGG 1 cut(s) 232
NmuCI GTSAC 1 cut(s) 190
PfeI GAWTC 1 cut(s) 50
PfoI TCCNGGA 1 cut(s) 230
PkrI GCNGC 2 cut(s) 72, 115
RsaI GTAC 1 cut(s) 81
RsaNI GTAC 1 cut(s) 80
RseI CAYNNNNRTG 1 cut(s) 128
SaqAI TTAA 1 cut(s) 149
SatI GCNGC 2 cut(s) 71, 114
ScrFI CCNGG 1 cut(s) 232
SduI GDGCHC 1 cut(s) 160
SetI ASST 4 cut(s) 25, 43, 58, 110
SgeI CNNG 8 cut(s) 50, 59, 79, 89, 195, 235, 243, 244
SmiMI CAYNNNNRTG 1 cut(s) 128
Sse9I AATT 2 cut(s) 98, 212
SsiI CCGC 2 cut(s) 71, 114
StyD4I CCNGG 1 cut(s) 230
TaaI ACNGT 1 cut(s) 84
TaqI TCGA 2 cut(s) 87, 224
TasI AATT 2 cut(s) 98, 212
TauI GCSGC 2 cut(s) 73, 116
TfiI GAWTC 1 cut(s) 50
Tru1I TTAA 1 cut(s) 149
Tru9I TTAA 1 cut(s) 149
TseFI GTSAC 1 cut(s) 190
Tsp45I GTSAC 1 cut(s) 190
XapI RAATTY 2 cut(s) 98, 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.