Rh3CG118100

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
9506451 .. 9511264
4814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG118100.1

Sequence Viewer

Length: 1902 bp
ATGTGTCAACACGGACTCCTCCAACAGAGCTCAGCTTGTATAGCACGGTTCTCAGAGGGGAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAGGGTGTTGAGCTTGTCCTCTTGTAATCTTTCAGGCCCTTTTCACGAGTCTCTTGCTAACCTCCGATCTCTCTCCGTGATTCAATTGGGATCGAACAATATCTTTGCTCCAGTTCCAGCATTCTTTGCCAACTTTTCAAACTTGACAACCTTGATTCTCGATTATTGTAATTTGCAAGGAACATTTCCGAAAGAGATCTTTCTATTACCTTCTCTTCGTGAGATTAGCTTTTTGATGAATGTAAACCTTGATGGTTCCTTGCCAGAATTTCCAAAGAATGGATCTCTTCAATTCCTGGATCTAAGCGGGACTAAATTTTCAGGGGCATTACCAAACTCTATTGGCAACCTCAAAATGTTGTCCACATTTCATATTGAAGACTGTAATTTCACGGGATCAATGCCCAAGTCAATGACAAACCTTACGCAATTGGTTTCTTTGTTGATGTATGGAAACAACTTTGAAGGTTCAATTCCGTCATTCAGTGCGGCCAAGAATCTAGAAGTAGTACATCTCGGTTTCAATGGTCTGACAGGTAATATTAATTGCATCCACTGGGGAAACCTTACTAACCTATTGCTTCTTGACTTATCTTACAATATGCTCAGTGGGAATATTCCATCAGCTCTGTTTTCTCTTCCCTTGCTGGGTAGGGTAGATCTTTCCAACAACCAATTCTCTGGTCATTTTTCAGAAATTTCTAATCTCTCATCCTACTCTGTCAAATACCTTGATTTGAGTAGAAACAATCTGGAAGGGCCAATTCCTATGTCTATCTTTAATTTACGGAGCCTTAATCATCTTTTTCTTTCTTCAAACAATTTCAGTGGTTCATTTCCTCTAGATGGTCTTCAACATCTGAGAAATCTTTCTTCTCTTTATCTTTCAAACAACAGCTTGCTTCTTTGCCATGATGCTACCAATTTCTCATATTCCTACTATCCTCAGTTCAAATATTTGTTGTTGGCTTCATTAAACTTGAGAACATTCCCTGATTTCTTGAGAAATCAATCTGAATTACTTTCTTTAGATCTTTCAGATAACCAGATACAGGGCAAGATACCCAACTGGATTTGGAGGTCCAATAATCTCTTTTACCTAAATCTTTCATGCAACTCTCTAGAAACTCTAGAAGGTCATACAATCAATCTCACTTATATGGAAACCCTTGACCTTCATTCCAACAAGCTTCATGGGAAAATCCCAATTTTCTCGTCACCTCACATACTTTATCTGGATTACTCAAGGAACAACTTCAGCTCTACCATACCGACTACCATTGAAGATATGATTCTTCACACCAGATTCTTCTCTGTTGCTAGTAATAACCTTCAAGGGATCATCCCAAGATCAATATGCAATTCAGATAGCCTTGAGGTTCTTGATATGTCAAATAATTCCTTGAGTGGCACAGTACCTCACTGCTTGTCAACAATGAGCACTCTTTCGGTACTTAATTTAAGGAGAAACAATTTTAGAAATGTAGGCATGTTGTCTCACAATTGCAGTTTGCAGACTCTAGACATCAGTGAAAATCATATACAAAGTCAGTTTCTGAAATCACTCGTCAATTGCCCTCAATTAGAGGTTCTGAACCTTGGAAAGAATCAAATAACAGAAGACATGTGTATACAGGCGCAAGGTACTGGAGACGTTGAAATGGTTGTCAAAAGCAATACACCCAACTCTGTCGCCGGTTTGGTTGGTCTGGTGACTCACCTTGGGTTATGTTCTTCAAAGGTTCCAGCCTTTGATTTTTTTCGTAATGTCTTTAAATTCTGCTTGTTGCCTATTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

633

Amino Acids

70.25

Weight (kDa)

6.12

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 129 - 184 2e-07 Leucine-rich repeat region
LRR_8 PF13855 275 - 334 1.9e-06 Leucine rich repeat
LRR_8 PF13855 473 - 526 8.9e-07 Leucine rich repeat
LRR_4 PF12799 537 - 573 4.8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 69
AccB7I CCANNNNNTGG 1 cut(s) 380
AccI GTMKAC 1 cut(s) 1732
AciI CCGC 2 cut(s) 408, 590
AclWI GGATC 5 cut(s) 199, 391, 408, 505, 1448
AcoI YGGCCR 1 cut(s) 591
AcsI RAATTY 4 cut(s) 368, 416, 798, 1877
AcuI CTGAAG 1 cut(s) 1342
AfaI GTAC 4 cut(s) 612, 1518, 1554, 1747
AfiI CCNNNNNNNGG 5 cut(s) 102, 380, 749, 947, 1153
AflIII ACRYGT 1 cut(s) 1725
AjnI CCWGG 1 cut(s) 396
AjuI GAANNNNNNNTTGG 2 cut(s) 761, 793
AluBI AGCT 8 cut(s) 30, 35, 114, 330, 728, 999, 1291, 1362
AluI AGCT 8 cut(s) 30, 35, 114, 330, 728, 999, 1291, 1362
Alw21I GWGCWC 2 cut(s) 32, 1544
Alw26I GTCTC 3 cut(s) 156, 1602, 1746
AlwI GGATC 5 cut(s) 199, 391, 408, 505, 1448
AlwNI CAGNNNCTG 1 cut(s) 1657
AoxI GGCC 3 cut(s) 136, 591, 860
ApoI RAATTY 4 cut(s) 368, 416, 798, 1877
AseI ATTAAT 1 cut(s) 645
Asp700I GAANNNNTTC 2 cut(s) 970, 1355
AspLEI GCGC 1 cut(s) 1741
AspS9I GGNCC 3 cut(s) 137, 860, 1182
AsuHPI GGTGA 3 cut(s) 1311, 1811, 1825
AvaII GGWCC 1 cut(s) 1182
AxyI CCTNAGG 1 cut(s) 101
BanI GGYRCC 1 cut(s) 69
BanII GRGCYC 1 cut(s) 32
BauI CACGAG 1 cut(s) 146
BbsI GAAGAC 3 cut(s) 486, 944, 1728
Bbv12I GWGCWC 2 cut(s) 32, 1544
BccI CCATC 3 cut(s) 347, 730, 941
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BciT130I CCWGG 1 cut(s) 398
BcoDI GTCTC 3 cut(s) 156, 1602, 1746
BfaI CTAG 6 cut(s) 602, 944, 1223, 1232, 1422, 1622
BglII AGATCT 3 cut(s) 297, 760, 1132
BisI GCNGC 1 cut(s) 591
BlpI GCTNAGC 1 cut(s) 31
BlsI GCNGC 1 cut(s) 592
Bme1390I CCNGG 1 cut(s) 398
Bme18I GGWCC 1 cut(s) 1182
BmgT120I GGNCC 3 cut(s) 137, 860, 1182
BmiI GGNNCC 4 cut(s) 71, 358, 893, 1845
BmrFI CCNGG 1 cut(s) 398
BmrI ACTGGG 1 cut(s) 667
BmsI GCATC 2 cut(s) 660, 1006
BmuI ACTGGG 1 cut(s) 667
BpiI GAAGAC 3 cut(s) 486, 944, 1728
BpmI CTGGAG 2 cut(s) 195, 1770
Bpu1102I GCTNAGC 1 cut(s) 31
BpuEI CTTGAG 5 cut(s) 1102, 1123, 1330, 1496, 1525
BsaJI CCNNGG 2 cut(s) 1699, 1822
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 5 cut(s) 102, 380, 749, 947, 1153
Bse118I RCCGGY 1 cut(s) 1796
Bse1I ACTGG 4 cut(s) 212, 662, 1175, 1753
Bse21I CCTNAGG 1 cut(s) 101
BseBI CCWGG 1 cut(s) 398
BseDI CCNNGG 2 cut(s) 1699, 1822
BseGI GGATG 3 cut(s) 651, 812, 1443
BseLI CCNNNNNNNGG 5 cut(s) 102, 380, 749, 947, 1153
BseMII CTCAG 6 cut(s) 45, 66, 115, 721, 953, 1061
BseNI ACTGG 4 cut(s) 212, 662, 1175, 1753
BseRI GAGGAG 1 cut(s) 8
BseYI CCCAGC 1 cut(s) 748
BshFI GGCC 3 cut(s) 138, 593, 862
BshNI GGYRCC 1 cut(s) 69
BsiHKAI GWGCWC 2 cut(s) 32, 1544
BsiSI CCGG 1 cut(s) 1797
BslFI GGGAC 1 cut(s) 424
BslI CCNNNNNNNGG 5 cut(s) 102, 380, 749, 947, 1153
BsmAI GTCTC 3 cut(s) 156, 1602, 1746
BsmBI CGTCTC 1 cut(s) 1746
BsmFI GGGAC 1 cut(s) 424
BsmI GAATGC 1 cut(s) 221
BsnI GGCC 3 cut(s) 138, 593, 862
Bsp1286I GDGCHC 2 cut(s) 32, 1544
Bsp1720I GCTNAGC 1 cut(s) 31
BspACI CCGC 2 cut(s) 408, 590
BspANI GGCC 3 cut(s) 138, 593, 862
BspCNI CTCAG 6 cut(s) 44, 65, 114, 720, 954, 1060
BspLI GGNNCC 4 cut(s) 71, 358, 893, 1845
BspPI GGATC 5 cut(s) 199, 391, 408, 505, 1448
BspT107I GGYRCC 1 cut(s) 69
BsrFI RCCGGY 1 cut(s) 1796
BsrI ACTGG 4 cut(s) 212, 662, 1175, 1753
BssAI RCCGGY 1 cut(s) 1796
BssECI CCNNGG 2 cut(s) 1699, 1822
BssNAI GTATAC 1 cut(s) 1733
BssSI CACGAG 1 cut(s) 146
BssT1I CCWWGG 2 cut(s) 1699, 1822
Bst1107I GTATAC 1 cut(s) 1733
Bst2BI CACGAG 1 cut(s) 146
Bst2UI CCWGG 1 cut(s) 398
Bst4CI ACNGT 3 cut(s) 48, 485, 1516
Bst6I CTCTTC 3 cut(s) 321, 393, 744
BstAPI GCANNNNNTGC 1 cut(s) 227
BstC8I GCNNGC 1 cut(s) 1001
BstDEI CTNAG 7 cut(s) 31, 52, 101, 404, 707, 962, 1047
BstF5I GGATG 3 cut(s) 651, 812, 1443
BstHHI GCGC 1 cut(s) 1741
BstMAI GTCTC 3 cut(s) 156, 1602, 1746
BstMWI GCNNNNNNNGC 2 cut(s) 41, 227
BstNI CCWGG 1 cut(s) 398
BstNSI RCATGY 2 cut(s) 1594, 1729
BstSCI CCNGG 1 cut(s) 396
BstV2I GAAGAC 3 cut(s) 486, 944, 1728
BstX2I RGATCY 5 cut(s) 297, 383, 400, 760, 1132
BstXI CCANNNNNNTGG 1 cut(s) 782
BstYI RGATCY 5 cut(s) 297, 383, 400, 760, 1132
BstZ17I GTATAC 1 cut(s) 1733
Bsu36I CCTNAGG 1 cut(s) 101
BsuRI GGCC 3 cut(s) 138, 593, 862
BtsCI GGATG 3 cut(s) 651, 812, 1443
BtsI GCAGTG 1 cut(s) 1522
BtsIMutI CAGTG 6 cut(s) 592, 655, 715, 934, 1522, 1636
Cac8I GCNNGC 1 cut(s) 1001
CaiI CAGNNNCTG 1 cut(s) 1657
CfoI GCGC 1 cut(s) 1741
Cfr10I RCCGGY 1 cut(s) 1796
Cfr13I GGNCC 3 cut(s) 137, 860, 1182
Csp6I GTAC 4 cut(s) 611, 1517, 1553, 1746
CspCI CAANNNNNGTGG 2 cut(s) 910, 945
CviAII CATG 5 cut(s) 1013, 1212, 1295, 1591, 1726
CviQI GTAC 4 cut(s) 611, 1517, 1553, 1746
DdeI CTNAG 7 cut(s) 31, 52, 101, 404, 707, 962, 1047
DraI TTTAAA 1 cut(s) 1876
EaeI YGGCCR 1 cut(s) 591
Eam1104I CTCTTC 3 cut(s) 321, 393, 744
EarI CTCTTC 3 cut(s) 321, 393, 744
Ecl136II GAGCTC 1 cut(s) 30
Eco130I CCWWGG 2 cut(s) 1699, 1822
Eco24I GRGCYC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 1182
Eco53kI GAGCTC 1 cut(s) 30
Eco57I CTGAAG 1 cut(s) 1342
Eco81I CCTNAGG 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 30
EcoO109I RGGNCCY 1 cut(s) 137
EcoRII CCWGG 1 cut(s) 396
EcoT14I CCWWGG 2 cut(s) 1699, 1822
EcoT38I GRGCYC 1 cut(s) 32
ErhI CCWWGG 2 cut(s) 1699, 1822
Esp3I CGTCTC 1 cut(s) 1746
FaeI CATG 5 cut(s) 1016, 1215, 1298, 1594, 1729
FaqI GGGAC 1 cut(s) 424
FatI CATG 5 cut(s) 1012, 1211, 1294, 1590, 1725
FauI CCCGC 1 cut(s) 401
FblI GTMKAC 1 cut(s) 1732
Fnu4HI GCNGC 1 cut(s) 591
FokI GGATG 3 cut(s) 638, 799, 1430
FriOI GRGCYC 1 cut(s) 32
Fsp4HI GCNGC 1 cut(s) 591
FspBI CTAG 6 cut(s) 602, 944, 1223, 1232, 1422, 1622
GlaI GCGC 1 cut(s) 1740
GluI GCNGC 1 cut(s) 591
GsaI CCCAGC 1 cut(s) 752
GsuI CTGGAG 2 cut(s) 195, 1770
HaeIII GGCC 3 cut(s) 138, 593, 862
HapII CCGG 1 cut(s) 1797
HhaI GCGC 1 cut(s) 1741
Hin1II CATG 5 cut(s) 1016, 1215, 1298, 1594, 1729
Hin6I GCGC 1 cut(s) 1739
HinP1I GCGC 1 cut(s) 1739
HincII GTYRAC 2 cut(s) 8, 1533
HindII GTYRAC 2 cut(s) 8, 1533
HindIII AAGCTT 1 cut(s) 1289
HpaII CCGG 1 cut(s) 1797
HphI GGTGA 3 cut(s) 1311, 1811, 1825
Hpy166II GTNNAC 5 cut(s) 8, 346, 465, 1533, 1733
Hpy8I GTNNAC 5 cut(s) 8, 346, 465, 1533, 1733
HpyAV CCTTC 7 cut(s) 101, 321, 560, 851, 1229, 1286, 1442
HpyCH4III ACNGT 3 cut(s) 48, 485, 1516
HpyCH4IV ACGT 1 cut(s) 1755
HpyCH4V TGCA 6 cut(s) 277, 651, 1215, 1461, 1608, 1615
HpyF10VI GCNNNNNNNGC 2 cut(s) 41, 227
HpyF3I CTNAG 7 cut(s) 31, 52, 101, 404, 707, 962, 1047
HpySE526I ACGT 1 cut(s) 1755
Hsp92II CATG 5 cut(s) 1016, 1215, 1298, 1594, 1729
HspAI GCGC 1 cut(s) 1739
LmnI GCTCC 2 cut(s) 214, 891
LweI GCATC 2 cut(s) 660, 1006
MaeI CTAG 6 cut(s) 602, 944, 1223, 1232, 1422, 1622
MaeII ACGT 1 cut(s) 1755
MaeIII GTNAC 2 cut(s) 1317, 1813
MfeI CAATTG 4 cut(s) 185, 530, 1603, 1672
MflI RGATCY 5 cut(s) 297, 383, 400, 760, 1132
MhlI GDGCHC 2 cut(s) 32, 1544
MlyI GAGTC 4 cut(s) 9, 158, 1612, 1810
MmeI TCCRAC 3 cut(s) 46, 792, 1308
MroXI GAANNNNTTC 2 cut(s) 970, 1355
MseI TTAA 8 cut(s) 645, 882, 897, 1076, 1557, 1562, 1875, 1896
MslI CAYNNNNRTG 1 cut(s) 1259
MspI CCGG 1 cut(s) 1797
MspR9I CCNGG 1 cut(s) 398
MunI CAATTG 4 cut(s) 185, 530, 1603, 1672
Mva1269I GAATGC 1 cut(s) 221
MvaI CCWGG 1 cut(s) 398
MwoI GCNNNNNNNGC 2 cut(s) 41, 227
NlaIII CATG 5 cut(s) 1016, 1215, 1298, 1594, 1729
NlaIV GGNNCC 4 cut(s) 71, 358, 893, 1845
NmuCI GTSAC 2 cut(s) 1317, 1813
NspI RCATGY 2 cut(s) 1594, 1729
PciI ACATGT 1 cut(s) 1725
PctI GAATGC 1 cut(s) 221
PdmI GAANNNNTTC 2 cut(s) 970, 1355
PfeI GAWTC 6 cut(s) 181, 256, 598, 1393, 1407, 1708
PflMI CCANNNNNTGG 1 cut(s) 380
PfoI TCCNGGA 1 cut(s) 396
PkrI GCNGC 1 cut(s) 592
PleI GAGTC 4 cut(s) 9, 157, 1612, 1810
PpsI GAGTC 4 cut(s) 9, 157, 1612, 1810
PscI ACATGT 1 cut(s) 1725
PshBI ATTAAT 1 cut(s) 645
Psp124BI GAGCTC 1 cut(s) 32
Psp6I CCWGG 1 cut(s) 396
PspFI CCCAGC 1 cut(s) 748
PspGI CCWGG 1 cut(s) 396
PspN4I GGNNCC 4 cut(s) 71, 358, 893, 1845
PspPI GGNCC 3 cut(s) 137, 860, 1182
PstNI CAGNNNCTG 1 cut(s) 1657
PsuI RGATCY 5 cut(s) 297, 383, 400, 760, 1132
RsaI GTAC 4 cut(s) 612, 1518, 1554, 1747
RsaNI GTAC 4 cut(s) 611, 1517, 1553, 1746
RseI CAYNNNNRTG 1 cut(s) 1259
SacI GAGCTC 1 cut(s) 32
SaqAI TTAA 8 cut(s) 645, 882, 897, 1076, 1557, 1562, 1875, 1896
SatI GCNGC 1 cut(s) 591
Sau96I GGNCC 3 cut(s) 137, 860, 1182
SchI GAGTC 4 cut(s) 9, 158, 1612, 1810
ScrFI CCNGG 1 cut(s) 398
SduI GDGCHC 2 cut(s) 32, 1544
SfaNI GCATC 2 cut(s) 660, 1006
SinI GGWCC 1 cut(s) 1182
SmiMI CAYNNNNRTG 1 cut(s) 1259
SmlI CTYRAG 5 cut(s) 1081, 1102, 1345, 1475, 1504
SmoI CTYRAG 5 cut(s) 1081, 1102, 1345, 1475, 1504
SsiI CCGC 2 cut(s) 408, 590
SspI AATATT 3 cut(s) 643, 718, 1058
SspMI CTAG 6 cut(s) 602, 944, 1223, 1232, 1422, 1622
SstI GAGCTC 1 cut(s) 32
StyD4I CCNGG 1 cut(s) 396
StyI CCWWGG 2 cut(s) 1699, 1822
TaaI ACNGT 3 cut(s) 48, 485, 1516
TaiI ACGT 1 cut(s) 1758
TaqI TCGA 2 cut(s) 194, 261
TatI WGTACW 1 cut(s) 610
TauI GCSGC 1 cut(s) 593
TfiI GAWTC 6 cut(s) 181, 256, 598, 1393, 1407, 1708
Tru1I TTAA 8 cut(s) 645, 882, 897, 1076, 1557, 1562, 1875, 1896
Tru9I TTAA 8 cut(s) 645, 882, 897, 1076, 1557, 1562, 1875, 1896
TscAI CASTG 6 cut(s) 592, 662, 715, 934, 1529, 1636
TseFI GTSAC 2 cut(s) 1317, 1813
Tsp45I GTSAC 2 cut(s) 1317, 1813
TspDTI ATGAA 7 cut(s) 353, 461, 924, 1062, 1200, 1268, 1283
TspGWI ACGGA 4 cut(s) 27, 166, 567, 904
TspRI CASTG 6 cut(s) 592, 662, 715, 934, 1529, 1636
Van91I CCANNNNNTGG 1 cut(s) 380
VpaK11BI GGWCC 1 cut(s) 1182
VspI ATTAAT 1 cut(s) 645
XapI RAATTY 4 cut(s) 368, 416, 798, 1877
XbaI TCTAGA 5 cut(s) 601, 943, 1222, 1231, 1621
XceI RCATGY 2 cut(s) 1594, 1729
XmiI GTMKAC 1 cut(s) 1732
XmnI GAANNNNTTC 2 cut(s) 970, 1355
XspI CTAG 6 cut(s) 602, 944, 1223, 1232, 1422, 1622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.