Rh7BG304200
ERF Family

Gamma-interferon-inducible lysosomal thiol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001585
Physical Location & Seq
Forward (+)
28982835 .. 28984424
1590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG304200.1

Sequence Viewer

Length: 699 bp
ATGGGTTTTACTTTTACCAGACTCTTCCTCTTCTTCCTCCTTTTGGTCTTAAACCCATCTCAATCTTATGCTGCTGAGAATGTGAGTGTGACTCTCTACTACGAGACTCTGTGTCCTTATTGTGCCGATTTCATAGTGAACCATTTGGCCAACATCTTCCAGAATGGGCTCATCTCCATCGTCAATCTCAGAATGGTCCCTTGGGGCAACGCTGGGCTCAATTCCGACGGCTCCTTCGCCTGCCAGCATGGAACAGATGAATGCTTGATCAACACAATTGAGGCCTGCACCATCACCATCTATCCTAATGTGAATCGGCATTTTACATTCATCCACTGCGTTGAGAGGCTCACGTTGCAGAACAAACACAGTAAATGGGCCGATTGCTTTGAAATGTCGAACTTGGGGACTGTACCTATCGATTGCTACAACAGTGGATATGGCAATCAGATTGAAACAAAATATGCAAAGGAAACTGCTCAGCTTAATCCACCACATAGATTTGTGCCGTGGCTGGTTGTCAATAATAAACCACTTGCAGAGGACTATGGAAATTTTATGGCCTATATCTGTAAGGCATACAAAGGAAAATCTCCAGAAGCTTGCAGATCCATTCGCTACAAGACTGAATCAATTGGAAATGAAAAATCGATTCCACAAGTTTGCCTAGCAGAACAACGAAGAAACTCTACATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04612 map04612
Pfam Domains
Protein Families
GILT

Protein Analysis

232

Amino Acids

26.3

Weight (kDa)

6.97

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GILT PF03227 30 - 131 3.8e-31 Gamma interferon inducible lysosomal thiol reductase (GILT)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 603
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 1 cut(s) 553
AfaI GTAC 1 cut(s) 414
AfiI CCNNNNNNNGG 1 cut(s) 43
AgsI TTSAA 2 cut(s) 392, 455
AhdI GACNNNNNGTC 1 cut(s) 111
AjuI GAANNNNNNNTTGG 2 cut(s) 184, 216
AluBI AGCT 2 cut(s) 484, 602
AluI AGCT 2 cut(s) 484, 602
Alw26I GTCTC 1 cut(s) 98
AlwI GGATC 1 cut(s) 603
AoxI GGCC 4 cut(s) 147, 282, 378, 561
ApeKI GCWGC 1 cut(s) 71
ApoI RAATTY 1 cut(s) 553
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
AspS9I GGNCC 2 cut(s) 196, 378
AsuHPI GGTGA 1 cut(s) 286
AvaII GGWCC 1 cut(s) 196
BalI TGGCCA 1 cut(s) 149
BanII GRGCYC 2 cut(s) 171, 219
BarI GAAGNNNNNNTAC 1 cut(s) 673
BbvI GCAGC 1 cut(s) 58
BccI CCATC 4 cut(s) 64, 185, 299, 305
BceAI ACGGC 2 cut(s) 244, 493
BclI TGATCA 1 cut(s) 267
BcoDI GTCTC 1 cut(s) 98
BfaI CTAG 1 cut(s) 668
BisI GCNGC 1 cut(s) 72
BlpI GCTNAGC 1 cut(s) 480
BlsI GCNGC 1 cut(s) 73
Bme18I GGWCC 1 cut(s) 196
BmeRI GACNNNNNGTC 1 cut(s) 111
BmgT120I GGNCC 2 cut(s) 196, 378
BmiI GGNNCC 2 cut(s) 198, 232
BplI GAGNNNNNCTC 2 cut(s) 76, 108
BpmI CTGGAG 1 cut(s) 579
Bpu1102I GCTNAGC 1 cut(s) 480
Bsa29I ATCGAT 2 cut(s) 420, 650
BsaJI CCNNGG 2 cut(s) 200, 509
Bsc4I CCNNNNNNNGG 1 cut(s) 43
BseCI ATCGAT 2 cut(s) 420, 650
BseDI CCNNGG 2 cut(s) 200, 509
BseGI GGATG 1 cut(s) 330
BseLI CCNNNNNNNGG 1 cut(s) 43
BseMII CTCAG 3 cut(s) 66, 202, 494
BseXI GCAGC 1 cut(s) 58
BseYI CCCAGC 1 cut(s) 212
BsgI GTGCAG 1 cut(s) 271
BshFI GGCC 4 cut(s) 149, 284, 380, 563
BshVI ATCGAT 2 cut(s) 420, 650
BslFI GGGAC 2 cut(s) 182, 421
BslI CCNNNNNNNGG 1 cut(s) 43
BsmAI GTCTC 1 cut(s) 98
BsmFI GGGAC 2 cut(s) 182, 421
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 4 cut(s) 149, 284, 380, 563
Bsp1286I GDGCHC 2 cut(s) 171, 219
Bsp143I GATC 2 cut(s) 267, 608
Bsp1720I GCTNAGC 1 cut(s) 480
BspANI GGCC 4 cut(s) 149, 284, 380, 563
BspCNI CTCAG 3 cut(s) 67, 201, 493
BspDI ATCGAT 2 cut(s) 420, 650
BspLI GGNNCC 2 cut(s) 198, 232
BspPI GGATC 1 cut(s) 603
BssECI CCNNGG 2 cut(s) 200, 509
BssMI GATC 2 cut(s) 267, 608
BssT1I CCWWGG 1 cut(s) 200
Bst4CI ACNGT 3 cut(s) 371, 412, 434
Bst6I CTCTTC 2 cut(s) 29, 35
BstC8I GCNNGC 4 cut(s) 241, 245, 286, 604
BstDEI CTNAG 3 cut(s) 75, 188, 480
BstDSI CCRYGG 1 cut(s) 509
BstF5I GGATG 1 cut(s) 330
BstKTI GATC 2 cut(s) 270, 611
BstMAI GTCTC 1 cut(s) 98
BstMBI GATC 2 cut(s) 267, 608
BstMWI GCNNNNNNNGC 1 cut(s) 355
BstV1I GCAGC 1 cut(s) 58
BstX2I RGATCY 1 cut(s) 608
BstYI RGATCY 1 cut(s) 608
Bsu15I ATCGAT 2 cut(s) 420, 650
BsuRI GGCC 4 cut(s) 149, 284, 380, 563
BsuTUI ATCGAT 2 cut(s) 420, 650
BtgI CCRYGG 1 cut(s) 509
BtsCI GGATG 1 cut(s) 330
BtsI GCAGTG 1 cut(s) 334
BtsIMutI CAGTG 2 cut(s) 334, 439
Cac8I GCNNGC 4 cut(s) 241, 245, 286, 604
Cfr13I GGNCC 2 cut(s) 196, 378
ClaI ATCGAT 2 cut(s) 420, 650
Csp6I GTAC 1 cut(s) 413
CviAII CATG 1 cut(s) 248
CviQI GTAC 1 cut(s) 413
DdeI CTNAG 3 cut(s) 75, 188, 480
DpnI GATC 2 cut(s) 269, 610
DpnII GATC 2 cut(s) 267, 608
DriI GACNNNNNGTC 1 cut(s) 111
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 2 cut(s) 29, 35
Eam1105I GACNNNNNGTC 1 cut(s) 111
EarI CTCTTC 2 cut(s) 29, 35
Eco130I CCWWGG 1 cut(s) 200
Eco147I AGGCCT 1 cut(s) 284
Eco24I GRGCYC 2 cut(s) 171, 219
Eco47I GGWCC 1 cut(s) 196
EcoT14I CCWWGG 1 cut(s) 200
EcoT38I GRGCYC 2 cut(s) 171, 219
ErhI CCWWGG 1 cut(s) 200
FaeI CATG 1 cut(s) 251
FaqI GGGAC 2 cut(s) 182, 421
FatI CATG 1 cut(s) 247
FbaI TGATCA 1 cut(s) 267
Fnu4HI GCNGC 1 cut(s) 72
FokI GGATG 1 cut(s) 317
FriOI GRGCYC 2 cut(s) 171, 219
Fsp4HI GCNGC 1 cut(s) 72
FspBI CTAG 1 cut(s) 668
GluI GCNGC 1 cut(s) 72
GsaI CCCAGC 1 cut(s) 216
GsuI CTGGAG 1 cut(s) 579
HaeIII GGCC 4 cut(s) 149, 284, 380, 563
Hin1II CATG 1 cut(s) 251
HindIII AAGCTT 1 cut(s) 600
HinfI GANTC 6 cut(s) 21, 91, 106, 313, 629, 652
HphI GGTGA 1 cut(s) 286
Hpy166II GTNNAC 1 cut(s) 139
Hpy188I TCNGA 3 cut(s) 191, 226, 450
Hpy188III TCNNGA 2 cut(s) 160, 596
Hpy8I GTNNAC 1 cut(s) 139
Hpy99I CGWCG 1 cut(s) 230
HpyAV CCTTC 1 cut(s) 244
HpyCH4III ACNGT 3 cut(s) 371, 412, 434
HpyCH4IV ACGT 1 cut(s) 353
HpyCH4V TGCA 5 cut(s) 288, 358, 467, 539, 606
HpyF10VI GCNNNNNNNGC 1 cut(s) 355
HpyF3I CTNAG 3 cut(s) 75, 188, 480
HpySE526I ACGT 1 cut(s) 353
Hsp92II CATG 1 cut(s) 251
Ksp22I TGATCA 1 cut(s) 267
Kzo9I GATC 2 cut(s) 267, 608
LmnI GCTCC 1 cut(s) 236
LpnPI CCDG 8 cut(s) 31, 173, 198, 253, 257, 298, 500, 609
Lsp1109I GCAGC 1 cut(s) 58
MaeI CTAG 1 cut(s) 668
MaeII ACGT 1 cut(s) 353
MaeIII GTNAC 1 cut(s) 88
MalI GATC 2 cut(s) 269, 610
MboI GATC 2 cut(s) 267, 608
MboII GAAGA 5 cut(s) 16, 22, 25, 148, 693
MfeI CAATTG 2 cut(s) 276, 633
MflI RGATCY 1 cut(s) 608
MhlI GDGCHC 2 cut(s) 171, 219
MlsI TGGCCA 1 cut(s) 149
MluCI AATT 4 cut(s) 220, 276, 553, 633
MluNI TGGCCA 1 cut(s) 149
MlyI GAGTC 3 cut(s) 15, 85, 100
MmeI TCCRAC 1 cut(s) 249
MnlI CCTC 5 cut(s) 38, 47, 274, 339, 535
Mox20I TGGCCA 1 cut(s) 149
MscI TGGCCA 1 cut(s) 149
MseI TTAA 3 cut(s) 50, 486, 697
Msp20I TGGCCA 1 cut(s) 149
MunI CAATTG 2 cut(s) 276, 633
Mva1269I GAATGC 1 cut(s) 266
MwoI GCNNNNNNNGC 1 cut(s) 355
NdeII GATC 2 cut(s) 267, 608
NlaIII CATG 1 cut(s) 251
NlaIV GGNNCC 2 cut(s) 198, 232
NmuCI GTSAC 1 cut(s) 88
PceI AGGCCT 1 cut(s) 284
PctI GAATGC 1 cut(s) 266
PfeI GAWTC 3 cut(s) 313, 629, 652
PkrI GCNGC 1 cut(s) 73
PleI GAGTC 3 cut(s) 15, 85, 100
PpsI GAGTC 3 cut(s) 15, 85, 100
PspFI CCCAGC 1 cut(s) 212
PspN4I GGNNCC 2 cut(s) 198, 232
PspPI GGNCC 2 cut(s) 196, 378
PsuI RGATCY 1 cut(s) 608
RsaI GTAC 1 cut(s) 414
RsaNI GTAC 1 cut(s) 413
SaqAI TTAA 3 cut(s) 50, 486, 697
SatI GCNGC 1 cut(s) 72
Sau3AI GATC 2 cut(s) 267, 608
Sau96I GGNCC 2 cut(s) 196, 378
SchI GAGTC 3 cut(s) 15, 85, 100
SduI GDGCHC 2 cut(s) 171, 219
SetI ASST 4 cut(s) 356, 418, 486, 604
SinI GGWCC 1 cut(s) 196
Sse9I AATT 4 cut(s) 220, 276, 553, 633
SseBI AGGCCT 1 cut(s) 284
SspMI CTAG 1 cut(s) 668
StuI AGGCCT 1 cut(s) 284
StyI CCWWGG 1 cut(s) 200
TaaI ACNGT 3 cut(s) 371, 412, 434
TaiI ACGT 1 cut(s) 356
TaqI TCGA 3 cut(s) 398, 420, 650
TasI AATT 4 cut(s) 220, 276, 553, 633
TfiI GAWTC 3 cut(s) 313, 629, 652
Tru1I TTAA 3 cut(s) 50, 486, 697
Tru9I TTAA 3 cut(s) 50, 486, 697
TscAI CASTG 2 cut(s) 341, 439
TseFI GTSAC 1 cut(s) 88
TseI GCWGC 1 cut(s) 71
Tsp45I GTSAC 1 cut(s) 88
TspDTI ATGAA 4 cut(s) 121, 273, 319, 657
TspRI CASTG 2 cut(s) 341, 439
VpaK11BI GGWCC 1 cut(s) 196
XapI RAATTY 1 cut(s) 553
XspI CTAG 1 cut(s) 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.