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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g18280 FvH4_5g00881 |
| rosa_chinensis | RchiOBHm_Chr2g0129311 RchiOBHm_Chr2g0129321 RchiOBHm_Chr7g0200501 RchiOBHm_Chr7g0200511 RchiOBHm_Chr7g0200711 |
| rosa_laevigata | RLG00000001973 RLG00000003685 RLG00000003700 RLG00000003704 RLG00000003705 RLG00000003720 |
| rosa_multiflora | Rmu_sc0000617.1_g000002 Rmu_sc0000617.1_g000021 Rmu_sc0000617.1_g000022 Rmu_sc0000708.1_g000001 Rmu_sc0000708.1_g000002 Rmu_sc0000708.1_g000010 Rmu_sc0000785.1_g000029 Rmu_sc0000785.1_g000030 Rmu_sc0005230.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00255460 Rroxscaffold_3G00255630 Rroxscaffold_3G00255800 Rroxscaffold_3G00255810 Rroxscaffold_3G00255910 |
| rosa_rugosa | Rorug05G0441400.1 Rorug07G0060700 Rorug07G0061200 |
| rosa_samantha | Rh2DG363700 Rh2DG363800 Rh7AG187000 Rh7AG188800 Rh7AG188900 Rh7BG189300 Rh7BG190200 Rh7BG192000 Rh7DG190400 Rh7DG190900 Rh7DG194200 |
| rosa_wichuraiana | Rw0G002940 Rw7G016360 Rw7G016610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 312 |
| AciI | CCGC | 1 cut(s) | 312 |
| AclWI | GGATC | 2 cut(s) | 276, 527 |
| AcsI | RAATTY | 1 cut(s) | 560 |
| AfaI | GTAC | 2 cut(s) | 190, 542 |
| AgsI | TTSAA | 3 cut(s) | 50, 65, 216 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 81 |
| AluBI | AGCT | 4 cut(s) | 130, 182, 492, 530 |
| AluI | AGCT | 4 cut(s) | 130, 182, 492, 530 |
| AlwI | GGATC | 2 cut(s) | 276, 527 |
| Ama87I | CYCGRG | 1 cut(s) | 536 |
| ApeKI | GCWGC | 1 cut(s) | 492 |
| ApoI | RAATTY | 1 cut(s) | 560 |
| AseI | ATTAAT | 1 cut(s) | 420 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 42 |
| AspA2I | CCTAGG | 1 cut(s) | 167 |
| AsuHPI | GGTGA | 2 cut(s) | 19, 47 |
| AvaI | CYCGRG | 1 cut(s) | 536 |
| AvrII | CCTAGG | 1 cut(s) | 167 |
| BbvI | GCAGC | 1 cut(s) | 479 |
| BccI | CCATC | 2 cut(s) | 16, 203 |
| BfaI | CTAG | 3 cut(s) | 168, 192, 480 |
| BisI | GCNGC | 1 cut(s) | 493 |
| BlnI | CCTAGG | 1 cut(s) | 167 |
| BlsI | GCNGC | 1 cut(s) | 494 |
| BmcAI | AGTACT | 1 cut(s) | 190 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 81 |
| BmeT110I | CYCGRG | 1 cut(s) | 536 |
| BmsI | GCATC | 1 cut(s) | 492 |
| BsaBI | GATNNNNATC | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 1 cut(s) | 167 |
| BsaWI | WCCGGW | 1 cut(s) | 235 |
| Bse1I | ACTGG | 1 cut(s) | 78 |
| Bse3DI | GCAATG | 1 cut(s) | 331 |
| Bse8I | GATNNNNATC | 1 cut(s) | 267 |
| BseDI | CCNNGG | 1 cut(s) | 167 |
| BseGI | GGATG | 1 cut(s) | 514 |
| BseJI | GATNNNNATC | 1 cut(s) | 267 |
| BseMI | GCAATG | 1 cut(s) | 331 |
| BseNI | ACTGG | 1 cut(s) | 78 |
| BseRI | GAGGAG | 2 cut(s) | 187, 322 |
| BseXI | GCAGC | 1 cut(s) | 479 |
| BsiHKCI | CYCGRG | 1 cut(s) | 536 |
| BsiSI | CCGG | 1 cut(s) | 236 |
| BslFI | GGGAC | 1 cut(s) | 471 |
| BsmFI | GGGAC | 1 cut(s) | 471 |
| BsoBI | CYCGRG | 1 cut(s) | 536 |
| Bsp143I | GATC | 3 cut(s) | 268, 273, 532 |
| BspACI | CCGC | 1 cut(s) | 312 |
| BspPI | GGATC | 2 cut(s) | 276, 527 |
| BspQI | GCTCTTC | 2 cut(s) | 172, 314 |
| BsrBI | CCGCTC | 1 cut(s) | 312 |
| BsrDI | GCAATG | 1 cut(s) | 331 |
| BsrI | ACTGG | 1 cut(s) | 78 |
| BssECI | CCNNGG | 1 cut(s) | 167 |
| BssMI | GATC | 3 cut(s) | 268, 273, 532 |
| BssT1I | CCWWGG | 1 cut(s) | 167 |
| Bst6I | CTCTTC | 4 cut(s) | 150, 172, 314, 372 |
| BstDEI | CTNAG | 2 cut(s) | 183, 390 |
| BstF5I | GGATG | 1 cut(s) | 514 |
| BstKTI | GATC | 3 cut(s) | 271, 276, 535 |
| BstMBI | GATC | 3 cut(s) | 268, 273, 532 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 127 |
| BstNSI | RCATGY | 1 cut(s) | 431 |
| BstV1I | GCAGC | 1 cut(s) | 479 |
| BtsCI | GGATG | 1 cut(s) | 514 |
| Csp6I | GTAC | 2 cut(s) | 189, 541 |
| CviAII | CATG | 4 cut(s) | 122, 206, 428, 556 |
| CviJI | RGCY | 6 cut(s) | 113, 130, 182, 389, 492, 530 |
| CviKI_1 | RGCY | 6 cut(s) | 113, 130, 182, 389, 492, 530 |
| CviQI | GTAC | 2 cut(s) | 189, 541 |
| DdeI | CTNAG | 2 cut(s) | 183, 390 |
| DpnI | GATC | 3 cut(s) | 270, 275, 534 |
| DpnII | GATC | 3 cut(s) | 268, 273, 532 |
| DriI | GACNNNNNGTC | 1 cut(s) | 81 |
| Eam1104I | CTCTTC | 4 cut(s) | 150, 172, 314, 372 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 81 |
| EarI | CTCTTC | 4 cut(s) | 150, 172, 314, 372 |
| Eco130I | CCWWGG | 1 cut(s) | 167 |
| Eco88I | CYCGRG | 1 cut(s) | 536 |
| EcoT14I | CCWWGG | 1 cut(s) | 167 |
| ErhI | CCWWGG | 1 cut(s) | 167 |
| FaeI | CATG | 4 cut(s) | 125, 209, 431, 559 |
| FaiI | YATR | 7 cut(s) | 116, 123, 207, 221, 261, 429, 557 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 30, 62 |
| FaqI | GGGAC | 1 cut(s) | 471 |
| FatI | CATG | 4 cut(s) | 121, 205, 427, 555 |
| Fnu4HI | GCNGC | 1 cut(s) | 493 |
| FokI | GGATG | 1 cut(s) | 501 |
| Fsp4HI | GCNGC | 1 cut(s) | 493 |
| FspBI | CTAG | 3 cut(s) | 168, 192, 480 |
| GluI | GCNGC | 1 cut(s) | 493 |
| HapII | CCGG | 1 cut(s) | 236 |
| Hin1II | CATG | 4 cut(s) | 125, 209, 431, 559 |
| HinfI | GANTC | 2 cut(s) | 227, 459 |
| HpaII | CCGG | 1 cut(s) | 236 |
| HphI | GGTGA | 2 cut(s) | 19, 47 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 2 cut(s) | 273, 519 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 277, 536 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| Hpy99I | CGWCG | 1 cut(s) | 76 |
| HpyAV | CCTTC | 3 cut(s) | 217, 363, 379 |
| HpyCH4IV | ACGT | 1 cut(s) | 246 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 127 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 390 |
| HpySE526I | ACGT | 1 cut(s) | 246 |
| Hsp92II | CATG | 4 cut(s) | 125, 209, 431, 559 |
| Kzo9I | GATC | 3 cut(s) | 268, 273, 532 |
| LguI | GCTCTTC | 2 cut(s) | 172, 314 |
| LmnI | GCTCC | 2 cut(s) | 118, 309 |
| LpnPI | CCDG | 2 cut(s) | 91, 249 |
| Lsp1109I | GCAGC | 1 cut(s) | 479 |
| LweI | GCATC | 1 cut(s) | 492 |
| MaeI | CTAG | 3 cut(s) | 168, 192, 480 |
| MaeII | ACGT | 1 cut(s) | 246 |
| MaeIII | GTNAC | 1 cut(s) | 242 |
| MalI | GATC | 3 cut(s) | 270, 275, 534 |
| MbiI | CCGCTC | 1 cut(s) | 312 |
| MboI | GATC | 3 cut(s) | 268, 273, 532 |
| MboII | GAAGA | 8 cut(s) | 38, 50, 167, 189, 331, 389, 394, 426 |
| MluCI | AATT | 2 cut(s) | 417, 560 |
| MlyI | GAGTC | 1 cut(s) | 453 |
| MroXI | GAANNNNTTC | 1 cut(s) | 42 |
| MseI | TTAA | 2 cut(s) | 420, 568 |
| MspI | CCGG | 1 cut(s) | 236 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 127 |
| NdeII | GATC | 3 cut(s) | 268, 273, 532 |
| NlaIII | CATG | 4 cut(s) | 125, 209, 431, 559 |
| NspI | RCATGY | 1 cut(s) | 431 |
| PciSI | GCTCTTC | 2 cut(s) | 172, 314 |
| PdmI | GAANNNNTTC | 1 cut(s) | 42 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| PkrI | GCNGC | 1 cut(s) | 494 |
| PleI | GAGTC | 1 cut(s) | 453 |
| PpsI | GAGTC | 1 cut(s) | 453 |
| PshBI | ATTAAT | 1 cut(s) | 420 |
| RsaI | GTAC | 2 cut(s) | 190, 542 |
| RsaNI | GTAC | 2 cut(s) | 189, 541 |
| SapI | GCTCTTC | 2 cut(s) | 172, 314 |
| SaqAI | TTAA | 2 cut(s) | 420, 568 |
| SatI | GCNGC | 1 cut(s) | 493 |
| Sau3AI | GATC | 3 cut(s) | 268, 273, 532 |
| ScaI | AGTACT | 1 cut(s) | 190 |
| SchI | GAGTC | 1 cut(s) | 453 |
| SetI | ASST | 9 cut(s) | 33, 93, 111, 132, 169, 184, 249, 494, 532 |
| SfaNI | GCATC | 1 cut(s) | 492 |
| Sse9I | AATT | 2 cut(s) | 417, 560 |
| SsiI | CCGC | 1 cut(s) | 312 |
| SspI | AATATT | 1 cut(s) | 57 |
| SspMI | CTAG | 3 cut(s) | 168, 192, 480 |
| StyI | CCWWGG | 1 cut(s) | 167 |
| TaiI | ACGT | 1 cut(s) | 249 |
| TasI | AATT | 2 cut(s) | 417, 560 |
| TatI | WGTACW | 1 cut(s) | 188 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| Tru1I | TTAA | 2 cut(s) | 420, 568 |
| Tru9I | TTAA | 2 cut(s) | 420, 568 |
| TseI | GCWGC | 1 cut(s) | 492 |
| TspDTI | ATGAA | 1 cut(s) | 236 |
| TspGWI | ACGGA | 1 cut(s) | 165 |
| VspI | ATTAAT | 1 cut(s) | 420 |
| XapI | RAATTY | 1 cut(s) | 560 |
| XceI | RCATGY | 1 cut(s) | 431 |
| XmaJI | CCTAGG | 1 cut(s) | 167 |
| XmnI | GAANNNNTTC | 1 cut(s) | 42 |
| XspI | CTAG | 3 cut(s) | 168, 192, 480 |
| ZrmI | AGTACT | 1 cut(s) | 190 |