Rh7DG194200

DNAJ heat shock N-terminal domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0002151
Physical Location & Seq
Forward (+)
18191007 .. 18191662
656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG194200.1

Sequence Viewer

Length: 621 bp
ATGGTAAAGAGCACCGAGCGCGTTTGCTACTATGATACGTTAGGCCTCGAACCCAACTGCTCGATGGATGATGTCAGACATGCTTACCATGAACTGTCCAAAATATACCACCCGGACAAATACAACTCCAGTTGCGGCATGCCGAAAGATGAAGCCTCCGCCAAATTTCTAGCAATCAAAAAGAACCCGATGAGTGAGCCTTCTACGACTCCTACCGCCAGACCTACGCTGTGCCAGAGGCTTTCAACCCCGACCTCGAAGCCGCCTTCGACAACATTAATTTCAACGGCTACTCCGACTCCGGCCGCGGCTTTTATAAGGTCTACTCCGACGTTTTCGACAGGATTTAAGGCAATGAGCGTGCATTTCATGAAAAAAATGACCCGCCGTGGGGTTCTGTTCACAACCCTCCGCGCATGGGAAATACGGACAGCCCGTATCCTGAGTTCCATAATGGATTTTTGCTGGGAGGAACCGCATGATGAGTACGATTCTGAGTCAGGTCTCCCGCAGAAGAGTAAAGCTGTGGTCCGCCTAAACATGAAAGCTAGGAAGAAGGCCAAGAAGGAGTACAACAACAAGGTGCATGCGGAGTTTGGCATACAATGCCAAGAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

206

Amino Acids

23.27

Weight (kDa)

9.36

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 10 - 60 1.4e-09 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 317
AccI GTMKAC 1 cut(s) 323
AccII CGCG 3 cut(s) 21, 308, 414
AcoI YGGCCR 1 cut(s) 303
AcsI RAATTY 1 cut(s) 164
AfaI GTAC 2 cut(s) 488, 572
AfiI CCNNNNNNNGG 3 cut(s) 390, 391, 418
AgsI TTSAA 2 cut(s) 246, 285
AluBI AGCT 2 cut(s) 524, 548
AluI AGCT 2 cut(s) 524, 548
Alw21I GWGCWC 1 cut(s) 14
Alw26I GTCTC 1 cut(s) 509
AoxI GGCC 3 cut(s) 43, 303, 558
ApoI RAATTY 1 cut(s) 164
AseI ATTAAT 1 cut(s) 278
AspLEI GCGC 2 cut(s) 21, 416
AspS9I GGNCC 1 cut(s) 529
AsuC2I CCSGG 1 cut(s) 113
AvaII GGWCC 1 cut(s) 529
Bbv12I GWGCWC 1 cut(s) 14
BccI CCATC 1 cut(s) 58
BceAI ACGGC 2 cut(s) 303, 372
BciVI GTATCC 1 cut(s) 449
BcnI CCSGG 1 cut(s) 113
BcoDI GTCTC 1 cut(s) 509
BfaI CTAG 2 cut(s) 170, 549
BfuI GTATCC 1 cut(s) 449
BisI GCNGC 4 cut(s) 136, 263, 306, 309
BlsI GCNGC 4 cut(s) 137, 264, 307, 310
Bme1390I CCNGG 1 cut(s) 113
Bme18I GGWCC 1 cut(s) 529
BmgT120I GGNCC 1 cut(s) 529
BmiI GGNNCC 1 cut(s) 474
BmrFI CCNGG 1 cut(s) 113
BpmI CTGGAG 1 cut(s) 112
BpuMI CCSGG 1 cut(s) 113
BsaI GGTCTC 1 cut(s) 509
BsaJI CCNNGG 2 cut(s) 306, 388
BsaXI ACNNNNNCTCC 4 cut(s) 277, 283, 307, 313
Bsc4I CCNNNNNNNGG 3 cut(s) 390, 391, 418
Bse1I ACTGG 1 cut(s) 129
Bse3DI GCAATG 1 cut(s) 360
BseDI CCNNGG 2 cut(s) 306, 388
BseGI GGATG 1 cut(s) 73
BseLI CCNNNNNNNGG 3 cut(s) 390, 391, 418
BseMI GCAATG 1 cut(s) 360
BseMII CTCAG 2 cut(s) 434, 486
BseNI ACTGG 1 cut(s) 129
BseX3I CGGCCG 1 cut(s) 303
BseYI CCCAGC 1 cut(s) 465
Bsh1236I CGCG 3 cut(s) 21, 308, 414
Bsh1285I CGRYCG 1 cut(s) 306
BshFI GGCC 3 cut(s) 45, 305, 560
BsiEI CGRYCG 1 cut(s) 306
BsiHKAI GWGCWC 1 cut(s) 14
BsiSI CCGG 2 cut(s) 113, 302
BslI CCNNNNNNNGG 3 cut(s) 390, 391, 418
BsmAI GTCTC 1 cut(s) 509
BsnI GGCC 3 cut(s) 45, 305, 560
Bso31I GGTCTC 1 cut(s) 509
Bsp1286I GDGCHC 1 cut(s) 14
BspANI GGCC 3 cut(s) 45, 305, 560
BspCNI CTCAG 2 cut(s) 435, 487
BspFNI CGCG 3 cut(s) 21, 308, 414
BspHI TCATGA 1 cut(s) 369
BspLI GGNNCC 1 cut(s) 474
BspTNI GGTCTC 1 cut(s) 509
BsrDI GCAATG 1 cut(s) 360
BsrI ACTGG 1 cut(s) 129
BssECI CCNNGG 2 cut(s) 306, 388
Bst4CI ACNGT 1 cut(s) 96
Bst6I CTCTTC 1 cut(s) 509
BstAPI GCANNNNNTGC 1 cut(s) 606
BstC8I GCNNGC 3 cut(s) 140, 362, 588
BstDEI CTNAG 2 cut(s) 443, 495
BstDSI CCRYGG 2 cut(s) 306, 388
BstF5I GGATG 1 cut(s) 73
BstFNI CGCG 3 cut(s) 21, 308, 414
BstHHI GCGC 2 cut(s) 21, 416
BstMAI GTCTC 1 cut(s) 509
BstMCI CGRYCG 1 cut(s) 306
BstMWI GCNNNNNNNGC 2 cut(s) 18, 606
BstNSI RCATGY 3 cut(s) 83, 142, 590
BstSCI CCNGG 1 cut(s) 111
BstUI CGCG 3 cut(s) 21, 308, 414
BstZI CGGCCG 1 cut(s) 303
BsuI GTATCC 1 cut(s) 449
BsuRI GGCC 3 cut(s) 45, 305, 560
BtgI CCRYGG 2 cut(s) 306, 388
BtsCI GGATG 1 cut(s) 73
Cac8I GCNNGC 3 cut(s) 140, 362, 588
CciI TCATGA 1 cut(s) 369
CfoI GCGC 2 cut(s) 21, 416
Cfr13I GGNCC 1 cut(s) 529
Cfr42I CCGCGG 1 cut(s) 309
Csp6I GTAC 2 cut(s) 487, 571
CviAII CATG 8 cut(s) 80, 89, 139, 370, 417, 479, 541, 587
CviQI GTAC 2 cut(s) 487, 571
DdeI CTNAG 2 cut(s) 443, 495
EaeI YGGCCR 1 cut(s) 303
EagI CGGCCG 1 cut(s) 303
Eam1104I CTCTTC 1 cut(s) 509
EarI CTCTTC 1 cut(s) 509
EciI GGCGGA 2 cut(s) 148, 521
EclXI CGGCCG 1 cut(s) 303
Eco147I AGGCCT 1 cut(s) 45
Eco31I GGTCTC 1 cut(s) 509
Eco47I GGWCC 1 cut(s) 529
Eco52I CGGCCG 1 cut(s) 303
FaeI CATG 8 cut(s) 83, 92, 142, 373, 420, 482, 544, 590
FatI CATG 8 cut(s) 79, 88, 138, 369, 416, 478, 540, 586
FauI CCCGC 2 cut(s) 392, 516
FblI GTMKAC 1 cut(s) 323
Fnu4HI GCNGC 4 cut(s) 136, 263, 306, 309
FokI GGATG 1 cut(s) 80
Fsp4HI GCNGC 4 cut(s) 136, 263, 306, 309
FspBI CTAG 2 cut(s) 170, 549
GlaI GCGC 2 cut(s) 20, 415
GluI GCNGC 4 cut(s) 136, 263, 306, 309
GsaI CCCAGC 1 cut(s) 469
GsuI CTGGAG 1 cut(s) 112
HaeIII GGCC 3 cut(s) 45, 305, 560
HapII CCGG 2 cut(s) 113, 302
HhaI GCGC 2 cut(s) 21, 416
Hin1II CATG 8 cut(s) 83, 92, 142, 373, 420, 482, 544, 590
Hin6I GCGC 2 cut(s) 19, 414
HinP1I GCGC 2 cut(s) 19, 414
HinfI GANTC 4 cut(s) 208, 298, 491, 497
HpaII CCGG 2 cut(s) 113, 302
Hpy166II GTNNAC 2 cut(s) 324, 402
Hpy188I TCNGA 4 cut(s) 77, 297, 330, 496
Hpy188III TCNNGA 2 cut(s) 370, 442
Hpy8I GTNNAC 2 cut(s) 324, 402
Hpy99I CGWCG 1 cut(s) 334
HpyAV CCTTC 4 cut(s) 210, 276, 550, 559
HpyCH4III ACNGT 1 cut(s) 96
HpyCH4IV ACGT 2 cut(s) 38, 332
HpyCH4V TGCA 2 cut(s) 364, 586
HpyF10VI GCNNNNNNNGC 2 cut(s) 18, 606
HpyF3I CTNAG 2 cut(s) 443, 495
HpySE526I ACGT 2 cut(s) 38, 332
Hsp92II CATG 8 cut(s) 83, 92, 142, 373, 420, 482, 544, 590
HspAI GCGC 2 cut(s) 19, 414
KspI CCGCGG 1 cut(s) 309
LpnPI CCDG 9 cut(s) 126, 142, 232, 248, 315, 327, 451, 455, 486
MaeI CTAG 2 cut(s) 170, 549
MaeII ACGT 2 cut(s) 38, 332
MboII GAAGA 2 cut(s) 526, 565
MhlI GDGCHC 1 cut(s) 14
MluCI AATT 2 cut(s) 164, 279
MlyI GAGTC 3 cut(s) 202, 292, 506
MmeI TCCRAC 2 cut(s) 320, 353
MnlI CCTC 7 cut(s) 56, 166, 231, 265, 419, 463, 607
MseI TTAA 2 cut(s) 278, 348
MspA1I CMGCKG 1 cut(s) 308
MspI CCGG 2 cut(s) 113, 302
MspR9I CCNGG 1 cut(s) 113
MvnI CGCG 3 cut(s) 21, 308, 414
MwoI GCNNNNNNNGC 2 cut(s) 18, 606
NciI CCSGG 1 cut(s) 113
NlaIII CATG 8 cut(s) 83, 92, 142, 373, 420, 482, 544, 590
NlaIV GGNNCC 1 cut(s) 474
NspI RCATGY 3 cut(s) 83, 142, 590
PaeI GCATGC 2 cut(s) 142, 590
PagI TCATGA 1 cut(s) 369
PceI AGGCCT 1 cut(s) 45
PcsI WCGNNNNNNNCGW 2 cut(s) 293, 433
PfeI GAWTC 1 cut(s) 491
PkrI GCNGC 4 cut(s) 137, 264, 307, 310
PleI GAGTC 3 cut(s) 202, 292, 505
PpsI GAGTC 3 cut(s) 202, 292, 505
PshBI ATTAAT 1 cut(s) 278
PsiI TTATAA 1 cut(s) 317
PspFI CCCAGC 1 cut(s) 465
PspN4I GGNNCC 1 cut(s) 474
PspPI GGNCC 1 cut(s) 529
PsrI GAACNNNNNNTAC 2 cut(s) 430, 462
RsaI GTAC 2 cut(s) 488, 572
RsaNI GTAC 2 cut(s) 487, 571
SacII CCGCGG 1 cut(s) 309
SaqAI TTAA 2 cut(s) 278, 348
SatI GCNGC 4 cut(s) 136, 263, 306, 309
Sau96I GGNCC 1 cut(s) 529
SchI GAGTC 3 cut(s) 202, 292, 506
ScrFI CCNGG 1 cut(s) 113
SduI GDGCHC 1 cut(s) 14
SetI ASST 9 cut(s) 41, 226, 257, 323, 335, 505, 526, 550, 585
Sfr303I CCGCGG 1 cut(s) 309
SgrBI CCGCGG 1 cut(s) 309
SinI GGWCC 1 cut(s) 529
SphI GCATGC 2 cut(s) 142, 590
Sse9I AATT 2 cut(s) 164, 279
SseBI AGGCCT 1 cut(s) 45
SspMI CTAG 2 cut(s) 170, 549
StuI AGGCCT 1 cut(s) 45
StyD4I CCNGG 1 cut(s) 111
TaaI ACNGT 1 cut(s) 96
TaiI ACGT 2 cut(s) 41, 335
TaqI TCGA 5 cut(s) 48, 62, 257, 269, 338
TasI AATT 2 cut(s) 164, 279
TatI WGTACW 1 cut(s) 570
TauI GCSGC 4 cut(s) 138, 265, 308, 311
TfiI GAWTC 1 cut(s) 491
Tru1I TTAA 2 cut(s) 278, 348
Tru9I TTAA 2 cut(s) 278, 348
TspDTI ATGAA 5 cut(s) 105, 165, 358, 386, 557
TspGWI ACGGA 1 cut(s) 442
VpaK11BI GGWCC 1 cut(s) 529
VspI ATTAAT 1 cut(s) 278
XapI RAATTY 1 cut(s) 164
XceI RCATGY 3 cut(s) 83, 142, 590
XcmI CCANNNNNNNNNTGG 1 cut(s) 61
XmiI GTMKAC 1 cut(s) 323
XspI CTAG 2 cut(s) 170, 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.