AT1G10340

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000496
Physical Location & Seq
Reverse (-)
3390322 .. 3392633
2312 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10340.1

Sequence Viewer

Length: 1737 bp
ATGCAGCCGATCTTCCATGCGATCCTTAAAAATGACCTTCCAGCTTTTTTAGAGTTGGTAGAAGATAGTGAATCGTCTCTGGAGGAGAGAAACGAGGAAGAACACTTGAACAACACGGTTTTGCACATGGCTGCAAAGTTTGGTCACCGAGAACTCGTCTCCAAGATTATTGAGCTCCGACCTTCCCTCGTGTCTTCCCGCAACGCATACAGAAACACACCTTTGCATCTTGCTGCTATCCTTGGAGATGTAAACATAGTTATGCAGATGTTAGAGACTGGATTGGAAGTGTGTTCTGCACGCAATATCAACAACCACACACCACTCCACTTGGCTTGCCGTAGCAATTCCATAGAGGCTGCCAGACTCATCGCGGAAAAGACACAATCAATTGGCCTCGGTGAACTCATTCTCGCCATATCAAGTGGATCCACTAGTATCGTAGGGACTATACTGGAGAGATTCCCAGACCTAGCTAGGGAAGAAGCTTGGGTGGTTGAAGACGGCTCACAATCAACGCTACTGCATCATGCGTGTGATAAGGGAGACTTTGAACTGACAACTATATTGTTAGGGCTCGATCAAGGATTAGAAGAAGCACTTAACCCCAATGGTTTATCACCTCTGCATCTTGCGGTCCTCAGAGGCTCGGTTGTGATCCTGGAGGAGTTCTTGGACAAGGTTCCATTGTCTTTCAGCTCAATCACGCCGTCGAAAGAGACAGTCTTTCATCTCGCTGCTCGAAACAAAAATATGGATGCCTTTGTTTTTATGGCAGAGAGTTTGGGAATTAACAGCCAAATTCTTCTACAGCAAACCGATGAAAGTGGCAACACTGTCTTACATATTGCTGCATCCGTCTCTTTTGATGCTCCTCTTATACGTTACATTGTTGGTAAGAATATAGTAGATATCACGTCCAAGAACAAGATGGGTTTTGAAGCTTTTCAACTTCTCCCTCGAGAAGCCCAAGACTTTGAGTTGTTATCAAGGTGGCTGAGATTTGGTACCGAGACTTCACAAGAGCTGGATTCTGAGAACAATGTAGAACAACACGAAGGCTCTCAAGAGGTCGAGGTAATACGGTTGCTAAGGATTATAGGAATAAACACATCAGAGATAGCAGAGAGAAAGAGAAGCAAGGAACAGGAAGTGGAAAGAGGTCGTCAGAACTTGGAATATCAGATGCATATAGAAGCATTACAGAATGCAAGAAATACGATTGCTATAGTGGCAGTCTTGATTGCTTCAGTTGCTTATGCCGGTGGGATAAACCCTCCGGGGGGCGTCTACCAAGACGGGCCATGGAGAGGGAAATCCTTAGTGGGGAAAACAACGGCGTTTAAGGTCTTTGCGATATGCAACAACATCGCACTGTTCACGTCCTTGGGCATCGTTATTCTTCTTGTTAGCATCATACCTTACAAGAGGAAACCCTTAAAGAGATTATTGGTGGCCACGCATAGGATGATGTGGGTTTCTGTAGGTTTCATGGCGACGGCTTATATAGCGGCGTCTTGGGTGACCATACCGCATTATCATGGAACACAATGGTTATTTCCAGCAATTGTAGCCGTTGCTGGTGGAGCGTTGACCGTACTCTTTTTCTATCTCGGAGTTGAGACCATCGGTCATTGGTTTAAGAAGATGAATCGTGTAGGGGATAATATACCTTCCTTTGCAAGAACCAGTTCAGATTTAGCCGTCTCCGGAAAATCAGGCTATTTCACCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

578

Amino Acids

63.92

Weight (kDa)

5.87

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 97 1.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 41 - 131 5.3e-14 Ankyrin repeats (3 copies)
Ank_2 PF12796 136 - 225 2.7e-06 Ankyrin repeats (3 copies)
PGG PF13962 399 - 508 1.7e-30 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1007
AccB1I GGYRCC 1 cut(s) 1007
AccI GTMKAC 1 cut(s) 1290
AccII CGCG 1 cut(s) 374
AccIII TCCGGA 1 cut(s) 1709
AciI CCGC 5 cut(s) 199, 374, 635, 1511, 1532
AclWI GGATC 4 cut(s) 16, 423, 436, 652
AcoI YGGCCR 1 cut(s) 1455
AcsI RAATTY 1 cut(s) 801
AcuI CTGAAG 1 cut(s) 1233
AcyI GRCGYC 2 cut(s) 1287, 1514
AfaI GTAC 2 cut(s) 1009, 1599
AfiI CCNNNNNNNGG 6 cut(s) 478, 1282, 1283, 1310, 1326, 1464
AgsI TTSAA 5 cut(s) 109, 500, 554, 941, 950
AhdI GACNNNNNGTC 1 cut(s) 1629
AhlI ACTAGT 1 cut(s) 434
AjiI CACGTC 2 cut(s) 918, 1383
AjnI CCWGG 1 cut(s) 660
AluBI AGCT 7 cut(s) 44, 175, 476, 488, 699, 944, 1027
AluI AGCT 7 cut(s) 44, 175, 476, 488, 699, 944, 1027
Alw21I GWGCWC 1 cut(s) 177
Alw26I GTCTC 9 cut(s) 81, 163, 269, 540, 713, 865, 1007, 1616, 1711
AlwI GGATC 4 cut(s) 16, 423, 436, 652
Ama87I CYCGRG 1 cut(s) 960
Aor13HI TCCGGA 1 cut(s) 1709
AoxI GGCC 3 cut(s) 394, 1301, 1455
ApeKI GCWGC 6 cut(s) 4, 131, 233, 359, 737, 851
ApoI RAATTY 1 cut(s) 801
Asp700I GAANNNNTTC 3 cut(s) 408, 945, 1690
Asp718I GGTACC 1 cut(s) 1007
AspS9I GGNCC 2 cut(s) 637, 1301
AsuC2I CCSGG 1 cut(s) 1281
AsuHPI GGTGA 5 cut(s) 137, 413, 612, 1534, 1720
AvaI CYCGRG 1 cut(s) 960
AvaII GGWCC 1 cut(s) 637
BalI TGGCCA 1 cut(s) 1457
BamHI GGATCC 1 cut(s) 428
BanI GGYRCC 1 cut(s) 1007
BanII GRGCYC 2 cut(s) 177, 579
BarI GAAGNNNNNNTAC 2 cut(s) 1000, 1032
BauI CACGAG 1 cut(s) 188
BbsI GAAGAC 2 cut(s) 186, 507
Bbv12I GWGCWC 1 cut(s) 177
BbvI GCAGC 6 cut(s) 16, 118, 220, 346, 724, 838
BccI CCATC 2 cut(s) 925, 1634
BceAI ACGGC 7 cut(s) 324, 520, 694, 1353, 1515, 1559, 1688
BcgI CGANNNNNNTGC 2 cut(s) 1351, 1385
BciT130I CCWGG 1 cut(s) 662
BcnI CCSGG 1 cut(s) 1281
BcoDI GTCTC 9 cut(s) 81, 163, 269, 540, 713, 865, 1007, 1616, 1711
BcuI ACTAGT 1 cut(s) 434
BfaI CTAG 3 cut(s) 435, 473, 477
BfmI CTRYAG 3 cut(s) 809, 1227, 1482
BisI GCNGC 7 cut(s) 5, 132, 234, 360, 738, 852, 1512
BlsI GCNGC 7 cut(s) 6, 133, 235, 361, 739, 853, 1513
Bme1390I CCNGG 2 cut(s) 662, 1281
Bme18I GGWCC 1 cut(s) 637
BmeRI GACNNNNNGTC 1 cut(s) 1629
BmeT110I CYCGRG 1 cut(s) 960
BmgBI CACGTC 2 cut(s) 918, 1383
BmgT120I GGNCC 2 cut(s) 637, 1301
BmiI GGNNCC 3 cut(s) 430, 684, 1009
BmrFI CCNGG 2 cut(s) 662, 1281
BmsI GCATC 9 cut(s) 235, 535, 637, 748, 859, 863, 1176, 1401, 1422
BpiI GAAGAC 2 cut(s) 186, 507
BpmI CTGGAG 3 cut(s) 101, 476, 683
Bpu10I CCTNAGC 1 cut(s) 1091
BpuEI CTTGAG 1 cut(s) 1050
BpuMI CCSGG 1 cut(s) 1281
BsaHI GRCGYC 2 cut(s) 1287, 1514
BsaI GGTCTC 1 cut(s) 1616
BsaJI CCNNGG 5 cut(s) 241, 397, 1280, 1304, 1386
BsaWI WCCGGW 1 cut(s) 1709
Bsc4I CCNNNNNNNGG 6 cut(s) 478, 1282, 1283, 1310, 1326, 1464
Bse118I RCCGGY 1 cut(s) 1262
Bse1I ACTGG 3 cut(s) 283, 459, 1689
BseAI TCCGGA 1 cut(s) 1709
BseBI CCWGG 1 cut(s) 662
BseDI CCNNGG 5 cut(s) 241, 397, 1280, 1304, 1386
BseGI GGATG 3 cut(s) 763, 854, 1473
BseLI CCNNNNNNNGG 6 cut(s) 478, 1282, 1283, 1310, 1326, 1464
BseMII CTCAG 3 cut(s) 655, 989, 1026
BseNI ACTGG 3 cut(s) 283, 459, 1689
BseRI GAGGAG 3 cut(s) 98, 680, 864
BseXI GCAGC 6 cut(s) 16, 118, 220, 346, 724, 838
BsgI GTGCAG 1 cut(s) 282
Bsh1236I CGCG 1 cut(s) 374
BshFI GGCC 3 cut(s) 396, 1303, 1457
BshNI GGYRCC 1 cut(s) 1007
BsiHKAI GWGCWC 1 cut(s) 177
BsiHKCI CYCGRG 1 cut(s) 960
BsiSI CCGG 3 cut(s) 1263, 1280, 1710
BslFI GGGAC 1 cut(s) 460
BslI CCNNNNNNNGG 6 cut(s) 478, 1282, 1283, 1310, 1326, 1464
BsmAI GTCTC 9 cut(s) 81, 163, 269, 540, 713, 865, 1007, 1616, 1711
BsmBI CGTCTC 4 cut(s) 81, 163, 865, 1711
BsmFI GGGAC 1 cut(s) 460
BsmI GAATGC 1 cut(s) 1213
BsnI GGCC 3 cut(s) 396, 1303, 1457
Bso31I GGTCTC 1 cut(s) 1616
BsoBI CYCGRG 1 cut(s) 960
Bsp1286I GDGCHC 2 cut(s) 177, 579
Bsp13I TCCGGA 1 cut(s) 1709
Bsp143I GATC 5 cut(s) 9, 21, 428, 580, 657
Bsp19I CCATGG 1 cut(s) 1304
BspACI CCGC 5 cut(s) 199, 374, 635, 1511, 1532
BspANI GGCC 3 cut(s) 396, 1303, 1457
BspCNI CTCAG 3 cut(s) 654, 990, 1027
BspEI TCCGGA 1 cut(s) 1709
BspFNI CGCG 1 cut(s) 374
BspLI GGNNCC 3 cut(s) 430, 684, 1009
BspPI GGATC 4 cut(s) 16, 423, 436, 652
BspT107I GGYRCC 1 cut(s) 1007
BspTNI GGTCTC 1 cut(s) 1616
BsrFI RCCGGY 1 cut(s) 1262
BsrI ACTGG 3 cut(s) 283, 459, 1689
BssAI RCCGGY 1 cut(s) 1262
BssECI CCNNGG 5 cut(s) 241, 397, 1280, 1304, 1386
BssMI GATC 5 cut(s) 9, 21, 428, 580, 657
BssNI GRCGYC 2 cut(s) 1287, 1514
BssSI CACGAG 1 cut(s) 188
BssT1I CCWWGG 3 cut(s) 241, 1304, 1386
Bst2BI CACGAG 1 cut(s) 188
Bst2UI CCWGG 1 cut(s) 662
Bst4CI ACNGT 6 cut(s) 118, 724, 838, 1086, 1377, 1597
BstACI GRCGYC 2 cut(s) 1287, 1514
BstC8I GCNNGC 2 cut(s) 301, 337
BstDEI CTNAG 5 cut(s) 641, 998, 1035, 1091, 1321
BstDSI CCRYGG 1 cut(s) 1304
BstEII GGTNACC 2 cut(s) 143, 1522
BstF5I GGATG 3 cut(s) 763, 854, 1473
BstFNI CGCG 1 cut(s) 374
BstKTI GATC 5 cut(s) 12, 24, 431, 583, 660
BstMAI GTCTC 9 cut(s) 81, 163, 269, 540, 713, 865, 1007, 1616, 1711
BstMBI GATC 5 cut(s) 9, 21, 428, 580, 657
BstMWI GCNNNNNNNGC 5 cut(s) 1232, 1253, 1508, 1571, 1586
BstNI CCWGG 1 cut(s) 662
BstPI GGTNACC 2 cut(s) 143, 1522
BstSCI CCNGG 2 cut(s) 660, 1279
BstSFI CTRYAG 3 cut(s) 809, 1227, 1482
BstUI CGCG 1 cut(s) 374
BstV1I GCAGC 6 cut(s) 16, 118, 220, 346, 724, 838
BstV2I GAAGAC 2 cut(s) 186, 507
BstX2I RGATCY 1 cut(s) 428
BstYI RGATCY 1 cut(s) 428
BsuRI GGCC 3 cut(s) 396, 1303, 1457
BtgI CCRYGG 1 cut(s) 1304
BtgZI GCGATG 2 cut(s) 355, 1354
BtrI CACGTC 2 cut(s) 918, 1383
BtsCI GGATG 3 cut(s) 763, 854, 1473
BtsIMutI CAGTG 2 cut(s) 834, 1373
Cac8I GCNNGC 2 cut(s) 301, 337
Cfr10I RCCGGY 1 cut(s) 1262
Cfr13I GGNCC 2 cut(s) 637, 1301
CseI GACGC 2 cut(s) 1276, 1503
Csp6I GTAC 2 cut(s) 1008, 1598
CspCI CAANNNNNGTGG 4 cut(s) 312, 317, 347, 352
CviAII CATG 6 cut(s) 17, 127, 530, 1305, 1492, 1541
CviQI GTAC 2 cut(s) 1008, 1598
DdeI CTNAG 5 cut(s) 641, 998, 1035, 1091, 1321
DpnI GATC 5 cut(s) 11, 23, 430, 582, 659
DpnII GATC 5 cut(s) 9, 21, 428, 580, 657
DriI GACNNNNNGTC 1 cut(s) 1629
EaeI YGGCCR 1 cut(s) 1455
Eam1105I GACNNNNNGTC 1 cut(s) 1629
Ecl136II GAGCTC 1 cut(s) 175
Eco130I CCWWGG 3 cut(s) 241, 1304, 1386
Eco24I GRGCYC 2 cut(s) 177, 579
Eco31I GGTCTC 1 cut(s) 1616
Eco32I GATATC 1 cut(s) 913
Eco47I GGWCC 1 cut(s) 637
Eco53kI GAGCTC 1 cut(s) 175
Eco57I CTGAAG 1 cut(s) 1233
Eco88I CYCGRG 1 cut(s) 960
Eco91I GGTNACC 2 cut(s) 143, 1522
EcoICRI GAGCTC 1 cut(s) 175
EcoO65I GGTNACC 2 cut(s) 143, 1522
EcoRII CCWGG 1 cut(s) 660
EcoRV GATATC 1 cut(s) 913
EcoT14I CCWWGG 3 cut(s) 241, 1304, 1386
EcoT22I ATGCAT 1 cut(s) 1191
EcoT38I GRGCYC 2 cut(s) 177, 579
ErhI CCWWGG 3 cut(s) 241, 1304, 1386
Esp3I CGTCTC 4 cut(s) 81, 163, 865, 1711
FaeI CATG 6 cut(s) 20, 130, 533, 1308, 1495, 1544
FalI AAGNNNNNCTT 4 cut(s) 533, 565, 585, 617
FaqI GGGAC 1 cut(s) 460
FatI CATG 6 cut(s) 16, 126, 529, 1304, 1491, 1540
FauI CCCGC 1 cut(s) 206
FblI GTMKAC 1 cut(s) 1290
Fnu4HI GCNGC 7 cut(s) 5, 132, 234, 360, 738, 852, 1512
FokI GGATG 3 cut(s) 770, 841, 1480
FriOI GRGCYC 2 cut(s) 177, 579
Fsp4HI GCNGC 7 cut(s) 5, 132, 234, 360, 738, 852, 1512
FspBI CTAG 3 cut(s) 435, 473, 477
GluI GCNGC 7 cut(s) 5, 132, 234, 360, 738, 852, 1512
GsuI CTGGAG 3 cut(s) 101, 476, 683
HaeIII GGCC 3 cut(s) 396, 1303, 1457
HapII CCGG 3 cut(s) 1263, 1280, 1710
HgaI GACGC 2 cut(s) 1276, 1503
Hin1I GRCGYC 2 cut(s) 1287, 1514
Hin1II CATG 6 cut(s) 20, 130, 533, 1308, 1495, 1544
HincII GTYRAC 1 cut(s) 1593
HindII GTYRAC 1 cut(s) 1593
HindIII AAGCTT 2 cut(s) 486, 942
HinfI GANTC 5 cut(s) 71, 366, 462, 1031, 1651
HpaII CCGG 3 cut(s) 1263, 1280, 1710
HphI GGTGA 5 cut(s) 137, 413, 612, 1534, 1720
Hpy166II GTNNAC 5 cut(s) 253, 404, 1291, 1380, 1593
Hpy188I TCNGA 8 cut(s) 179, 644, 1036, 1117, 1170, 1185, 1616, 1696
Hpy188III TCNNGA 5 cut(s) 80, 962, 1067, 1240, 1710
Hpy8I GTNNAC 5 cut(s) 253, 404, 1291, 1380, 1593
Hpy99I CGWCG 2 cut(s) 715, 1501
HpyAV CCTTC 4 cut(s) 47, 192, 1052, 1683
HpyCH4III ACNGT 6 cut(s) 118, 724, 838, 1086, 1377, 1597
HpyCH4IV ACGT 3 cut(s) 883, 917, 1382
HpyF10VI GCNNNNNNNGC 5 cut(s) 1232, 1253, 1508, 1571, 1586
HpyF3I CTNAG 5 cut(s) 641, 998, 1035, 1091, 1321
HpySE526I ACGT 3 cut(s) 883, 917, 1382
Hsp92I GRCGYC 2 cut(s) 1287, 1514
Hsp92II CATG 6 cut(s) 20, 130, 533, 1308, 1495, 1544
Kpn2I TCCGGA 1 cut(s) 1709
KpnI GGTACC 1 cut(s) 1011
Kzo9I GATC 5 cut(s) 9, 21, 428, 580, 657
LmnI GCTCC 3 cut(s) 180, 877, 1586
Lsp1109I GCAGC 6 cut(s) 16, 118, 220, 346, 724, 838
LweI GCATC 9 cut(s) 235, 535, 637, 748, 859, 863, 1176, 1401, 1422
MaeI CTAG 3 cut(s) 435, 473, 477
MaeII ACGT 3 cut(s) 883, 917, 1382
MaeIII GTNAC 3 cut(s) 143, 884, 1522
MalI GATC 5 cut(s) 11, 23, 430, 582, 659
MboI GATC 5 cut(s) 9, 21, 428, 580, 657
MfeI CAATTG 2 cut(s) 390, 1566
MflI RGATCY 1 cut(s) 428
MhlI GDGCHC 2 cut(s) 177, 579
MlsI TGGCCA 1 cut(s) 1457
MluCI AATT 5 cut(s) 346, 390, 789, 801, 1566
MluNI TGGCCA 1 cut(s) 1457
MlyI GAGTC 1 cut(s) 360
MmeI TCCRAC 1 cut(s) 202
Mox20I TGGCCA 1 cut(s) 1457
Mph1103I ATGCAT 1 cut(s) 1191
MroI TCCGGA 1 cut(s) 1709
MroXI GAANNNNTTC 3 cut(s) 408, 945, 1690
MscI TGGCCA 1 cut(s) 1457
MseI TTAA 7 cut(s) 27, 603, 792, 1344, 1439, 1641, 1735
MslI CAYNNNNRTG 3 cut(s) 260, 534, 1539
Msp20I TGGCCA 1 cut(s) 1457
MspI CCGG 3 cut(s) 1263, 1280, 1710
MspR9I CCNGG 2 cut(s) 662, 1281
MunI CAATTG 2 cut(s) 390, 1566
Mva1269I GAATGC 1 cut(s) 1213
MvaI CCWGG 1 cut(s) 662
MvnI CGCG 1 cut(s) 374
MwoI GCNNNNNNNGC 5 cut(s) 1232, 1253, 1508, 1571, 1586
NciI CCSGG 1 cut(s) 1281
NcoI CCATGG 1 cut(s) 1304
NdeII GATC 5 cut(s) 9, 21, 428, 580, 657
NlaIII CATG 6 cut(s) 20, 130, 533, 1308, 1495, 1544
NlaIV GGNNCC 3 cut(s) 430, 684, 1009
NmuCI GTSAC 2 cut(s) 143, 1522
NsiI ATGCAT 1 cut(s) 1191
PaeR7I CTCGAG 1 cut(s) 960
PctI GAATGC 1 cut(s) 1213
PdmI GAANNNNTTC 3 cut(s) 408, 945, 1690
PfeI GAWTC 4 cut(s) 71, 462, 1031, 1651
PfoI TCCNGGA 1 cut(s) 660
PkrI GCNGC 7 cut(s) 6, 133, 235, 361, 739, 853, 1513
PleI GAGTC 1 cut(s) 360
PpsI GAGTC 1 cut(s) 360
Psp124BI GAGCTC 1 cut(s) 177
Psp6I CCWGG 1 cut(s) 660
PspEI GGTNACC 2 cut(s) 143, 1522
PspGI CCWGG 1 cut(s) 660
PspN4I GGNNCC 3 cut(s) 430, 684, 1009
PspPI GGNCC 2 cut(s) 637, 1301
PsuI RGATCY 1 cut(s) 428
RsaI GTAC 2 cut(s) 1009, 1599
RsaNI GTAC 2 cut(s) 1008, 1598
RseI CAYNNNNRTG 3 cut(s) 260, 534, 1539
SacI GAGCTC 1 cut(s) 177
SaqAI TTAA 7 cut(s) 27, 603, 792, 1344, 1439, 1641, 1735
SatI GCNGC 7 cut(s) 5, 132, 234, 360, 738, 852, 1512
Sau3AI GATC 5 cut(s) 9, 21, 428, 580, 657
Sau96I GGNCC 2 cut(s) 637, 1301
SchI GAGTC 1 cut(s) 360
ScrFI CCNGG 2 cut(s) 662, 1281
SduI GDGCHC 2 cut(s) 177, 579
SfaNI GCATC 9 cut(s) 235, 535, 637, 748, 859, 863, 1176, 1401, 1422
SfcI CTRYAG 3 cut(s) 809, 1227, 1482
Sfr274I CTCGAG 1 cut(s) 960
SinI GGWCC 1 cut(s) 637
SlaI CTCGAG 1 cut(s) 960
SmiMI CAYNNNNRTG 3 cut(s) 260, 534, 1539
SmlI CTYRAG 2 cut(s) 960, 1065
SmoI CTYRAG 2 cut(s) 960, 1065
SpeI ACTAGT 1 cut(s) 434
Sse9I AATT 5 cut(s) 346, 390, 789, 801, 1566
SsiI CCGC 5 cut(s) 199, 374, 635, 1511, 1532
SspMI CTAG 3 cut(s) 435, 473, 477
SstI GAGCTC 1 cut(s) 177
StyD4I CCNGG 2 cut(s) 660, 1279
StyI CCWWGG 3 cut(s) 241, 1304, 1386
TaaI ACNGT 6 cut(s) 118, 724, 838, 1086, 1377, 1597
TaiI ACGT 3 cut(s) 886, 920, 1385
TaqI TCGA 5 cut(s) 579, 713, 742, 961, 1074
TaqII GACCGA 1 cut(s) 1619
TasI AATT 5 cut(s) 346, 390, 789, 801, 1566
TauI GCSGC 1 cut(s) 1514
TfiI GAWTC 4 cut(s) 71, 462, 1031, 1651
Tru1I TTAA 7 cut(s) 27, 603, 792, 1344, 1439, 1641, 1735
Tru9I TTAA 7 cut(s) 27, 603, 792, 1344, 1439, 1641, 1735
TscAI CASTG 2 cut(s) 841, 1380
TseFI GTSAC 2 cut(s) 143, 1522
TseI GCWGC 6 cut(s) 4, 131, 233, 359, 737, 851
Tsp45I GTSAC 2 cut(s) 143, 1522
TspDTI ATGAA 4 cut(s) 719, 837, 1480, 1664
TspGWI ACGGA 1 cut(s) 847
TspRI CASTG 2 cut(s) 841, 1380
VpaK11BI GGWCC 1 cut(s) 637
XapI RAATTY 1 cut(s) 801
XcmI CCANNNNNNNNNTGG 1 cut(s) 928
XhoI CTCGAG 1 cut(s) 960
XmiI GTMKAC 1 cut(s) 1290
XmnI GAANNNNTTC 3 cut(s) 408, 945, 1690
XspI CTAG 3 cut(s) 435, 473, 477
Zsp2I ATGCAT 1 cut(s) 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.