Rh1AG248700

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000496
Physical Location & Seq
Forward (+)
46303907 .. 46306715
2809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG248700.1

Sequence Viewer

Length: 2142 bp
ATGGTGACAGAAATTGCAATTAATTTCTCCAAAAACAAAGAGGTCACAATGGATTTCAGGATTTTAGAGGCAATCGAGAGAAAGGACATAGTCACATTTGCTAGCTTAGTCCGAGAAAATGAAGGAATTCTCGAGCAAAGAGAAGCTGATACTCGGAACACGCCATTACACCTTGTGTCAAAGTTCGGATACCTTGAAATGGCATCTGAAATTGTTTCTTTGTGCCCGGACATGGTTGCTGCTGAGAATAAGCACCAGGAGACTCCAGTCCATGAAGCTTGTCGAACAGGGAATCCCCGGATTTTAAACATACTACTGGAAGCAAATCCTGAAGTAGTTAGTAAGCTTAACAGTATAGACAAAATCAGTGCACTTTCTCTGGCATGTAGCTATGGTCATCTTGATGTGGTGAGTCTCTTACTGAAAGAGCCTGGGAAGCTAGGTTTAGGGAAAGAAGGGTTTGATCAAGCATGTATACACTTGGCTGTGACTGGTGGACACATGGATGTTGTTAAAGAGTTGCTAAGAGTGTGTCCTGACCTTGCTTATATGGTTGATGAGAAAGGAAACTATCCATTGCACTATGCAACTAGCAAAGAAAACAGGGAGATAACCTGGACACTCCTTAAGCTTGATCCAAAGCTTGCTCAGCAGCACAATCTCAGTGGTCACACACCCTTGCACTTGGCAGCAATAAACTACAAAGTCTCAGTCCTTCAAGTTTTTGTCACAATGGCTAAACCATCTTTTCAAATCGTAACAAAAGCCGGAGAGACAGTATTCCACTTGGCTGTGAAATATGGGCGCTATGATGCTATAGTATACTTGACCTATGTCTGTGATGATATGGATTTCTTTGACTGTCGAGACCGTTATAGTAACACCATCCTACATCTTGCAGTTTCTGAAGCACAGCATAAGATAGCAGAGTACCTAATTAGCAAAAAAAAAGTGGAGCTCAATTCTAGAAACAATGAAGGACTGACAGCCCTTGACCTCCTCAAACAGAGCAAGGAAAGTGAAGACAATCAGCGTCTTGAAGCCATGCTAATGAAAGCAGGAGGTAAAACAAGGATTGAACTGTTATCTACTTCACCAAAGGCAGATAAAACCACTACTCAGCCAGTGACACTTCCTGAAAACATTCCAAAACGAGCACAATTTTTTAAAGAGCATGAACTGCAGTTGTCCATAGCTTGGTCTGCTGCATCCAAGTCCCCATCAAGATCATCAGCACCCACGTCCCAGATGTCAACACCTTTTCCATCACCCCAATCCAGCAAGTCTTCACCTAAGCTGCCATCACCGCAATCTAGCAAGTCATCGCCTAAGCTGCCATCCCCACCATCTAGCAAGTCATCGCCTCAGCTTCAGGTTGGGGAAGGCTCATCACGTCAGCAGCAAGTTGGATCAGCATTTGAAGTTAAAGAGGGACTGGAATATGAAAGACAGAAGAAGCATGAGTTTCTTTTGCAAACCTTTGCGAGACAACACTATCCAAGCAAATGGAACCAAACAGAAACGAGTACTGAGATTTTCTACAGCCGACGAAGGAAACATGAAAAAGTTTATACAGAGGCACTACAGAATGCAAGGAACACTATAACACTAGTTGCCATTTTGATCGCAACGGTTACTTTTGCTGCTGGCATTAGTCCCCCGGGTGGTGTTTATCAGGATAAACATATGAAAGGGAAGTCAATAGCAGGCACAACAACTGCTTTCAAGGTGTTTGAAATAAGCAATTATGTCGCGCTATTCACATCACTCTCGATAGTTGTTGTTCTTATGAGTATCATTCCATATCGGAGAAAGCCATTGATAAGGTTGTTGAGGGTTGCTCATAAGGTAATGTGGGTAGCTGTGGCATTCATGGCAACAGGGTTTGTTGCAGCCACATGGGTTATCATGCCACATAATCCGAAAAATGAATTGTTGTTTGTAGCCTTTTTGACTATAAGCATTGGAATTCTGGGAACAGTTTTTATTTGGCTAGTTGTTATGCTAGTTGTTCATTGCCTACGAAAGTCGAAGTGGAAGAAGAGAAGGAGAGAAATTGGGGAGCCTGATGAGGACCCTGAAATGGGAAGCCAAAACTCAGATGTTCATAGCACCTATAATCAAGGATATCATTCATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

713

Amino Acids

79.91

Weight (kDa)

9.05

Isoelectric Point (pI)

48.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 34 - 112 5.9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 125 - 212 7.5e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 219 - 277 9.2e-06 Ankyrin repeats (3 copies)
PGG PF13962 526 - 635 4.8e-31 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1197
AccI GTMKAC 2 cut(s) 475, 822
AccII CGCG 1 cut(s) 1754
AciI CCGC 1 cut(s) 1307
AclWI GGATC 2 cut(s) 629, 1417
AcsI RAATTY 2 cut(s) 126, 1968
AcuI CTGAAG 3 cut(s) 351, 927, 1355
AdeI CACNNNGTG 1 cut(s) 175
AfaI GTAC 2 cut(s) 932, 1528
AfiI CCNNNNNNNGG 6 cut(s) 199, 232, 1197, 1664, 2083, 2084
AflII CTTAAG 1 cut(s) 626
AgsI TTSAA 8 cut(s) 197, 719, 752, 1040, 1079, 1421, 1726, 1736
AhlI ACTAGT 1 cut(s) 1609
AjiI CACGTC 2 cut(s) 1242, 1394
AjnI CCWGG 3 cut(s) 255, 430, 614
AloI GAACNNNNNNTCC 2 cut(s) 277, 309
Alw21I GWGCWC 3 cut(s) 373, 960, 1159
Alw26I GTCTC 6 cut(s) 254, 419, 712, 767, 861, 1480
Alw44I GTGCAC 1 cut(s) 369
AlwI GGATC 2 cut(s) 629, 1417
AlwNI CAGNNNCTG 1 cut(s) 905
Ama87I CYCGRG 2 cut(s) 131, 1660
ApaLI GTGCAC 1 cut(s) 369
ApeKI GCWGC 9 cut(s) 239, 652, 689, 1205, 1297, 1333, 1399, 1643, 1892
ApoI RAATTY 2 cut(s) 126, 1968
ArsI GACNNNNNNTTYG 2 cut(s) 696, 728
AseI ATTAAT 1 cut(s) 21
Asp700I GAANNNNTTC 2 cut(s) 126, 1143
AspLEI GCGC 2 cut(s) 807, 1756
AspS9I GGNCC 1 cut(s) 2074
AsuC2I CCSGG 4 cut(s) 227, 298, 1661, 1662
AsuHPI GGTGA 6 cut(s) 16, 421, 1086, 1260, 1281, 1296
AsuNHI GCTAGC 1 cut(s) 101
AvaI CYCGRG 2 cut(s) 131, 1660
AvaII GGWCC 1 cut(s) 2074
BaeGI GKGCMC 2 cut(s) 227, 373
BanII GRGCYC 1 cut(s) 960
BbsI GAAGAC 2 cut(s) 1029, 1278
Bbv12I GWGCWC 3 cut(s) 373, 960, 1159
BbvCI CCTCAGC 1 cut(s) 1365
BbvI GCAGC 9 cut(s) 226, 664, 701, 1192, 1284, 1320, 1411, 1630, 1904
BccI CCATC 7 cut(s) 751, 893, 1228, 1273, 1309, 1345, 1354
BcgI CGANNNNNNTGC 2 cut(s) 1732, 1766
BciT130I CCWGG 3 cut(s) 257, 432, 616
BciVI GTATCC 1 cut(s) 182
BclI TGATCA 1 cut(s) 463
BcnI CCSGG 4 cut(s) 227, 298, 1661, 1662
BcoDI GTCTC 6 cut(s) 254, 419, 712, 767, 861, 1480
BcuI ACTAGT 1 cut(s) 1609
BfaI CTAG 9 cut(s) 102, 440, 591, 966, 1314, 1350, 1610, 1994, 2006
BfmI CTRYAG 4 cut(s) 816, 1181, 1540, 1583
BfoI RGCGCY 1 cut(s) 808
BfrI CTTAAG 1 cut(s) 626
BfuI GTATCC 1 cut(s) 182
BisI GCNGC 9 cut(s) 240, 653, 690, 1206, 1298, 1334, 1400, 1644, 1893
BlpI GCTNAGC 1 cut(s) 648
BlsI GCNGC 9 cut(s) 241, 654, 691, 1207, 1299, 1335, 1401, 1645, 1894
BmcAI AGTACT 1 cut(s) 1528
Bme1390I CCNGG 7 cut(s) 227, 257, 298, 432, 616, 1661, 1662
Bme18I GGWCC 1 cut(s) 2074
BmeT110I CYCGRG 2 cut(s) 131, 1660
BmgBI CACGTC 2 cut(s) 1242, 1394
BmgT120I GGNCC 1 cut(s) 2074
BmiI GGNNCC 3 cut(s) 1511, 2064, 2076
BmrFI CCNGG 7 cut(s) 227, 257, 298, 432, 616, 1661, 1662
BmsI GCATC 3 cut(s) 212, 802, 1217
BmtI GCTAGC 1 cut(s) 105
BoxI GACNNNNGTC 2 cut(s) 266, 833
BpiI GAAGAC 2 cut(s) 1029, 1278
BplI GAGNNNNNCTC 2 cut(s) 1825, 1857
BpmI CTGGAG 1 cut(s) 249
Bpu10I CCTNAGC 3 cut(s) 1293, 1329, 1365
Bpu1102I GCTNAGC 1 cut(s) 648
BpuMI CCSGG 4 cut(s) 227, 298, 1661, 1662
BsaI GGTCTC 1 cut(s) 861
BsaJI CCNNGG 4 cut(s) 296, 431, 1659, 1660
BsaXI ACNNNNNCTCC 2 cut(s) 762, 792
Bsc4I CCNNNNNNNGG 6 cut(s) 199, 232, 1197, 1664, 2083, 2084
Bse1I ACTGG 5 cut(s) 266, 321, 496, 1124, 1440
Bse3DI GCAATG 2 cut(s) 575, 2014
BseBI CCWGG 3 cut(s) 257, 432, 616
BseDI CCNNGG 4 cut(s) 296, 431, 1659, 1660
BseGI GGATG 4 cut(s) 511, 885, 1208, 1337
BseLI CCNNNNNNNGG 6 cut(s) 199, 232, 1197, 1664, 2083, 2084
BseMI GCAATG 2 cut(s) 575, 2014
BseMII CTCAG 8 cut(s) 234, 662, 676, 723, 1133, 1379, 1521, 2112
BseNI ACTGG 5 cut(s) 266, 321, 496, 1124, 1440
BseRI GAGGAG 1 cut(s) 989
BseSI GKGCMC 2 cut(s) 227, 373
BseXI GCAGC 9 cut(s) 226, 664, 701, 1192, 1284, 1320, 1411, 1630, 1904
Bsh1236I CGCG 1 cut(s) 1754
BsiHKAI GWGCWC 3 cut(s) 373, 960, 1159
BsiHKCI CYCGRG 2 cut(s) 131, 1660
BsiSI CCGG 4 cut(s) 227, 298, 768, 1661
BslFI GGGAC 4 cut(s) 1201, 1228, 1446, 1641
BslI CCNNNNNNNGG 6 cut(s) 199, 232, 1197, 1664, 2083, 2084
BsmAI GTCTC 6 cut(s) 254, 419, 712, 767, 861, 1480
BsmFI GGGAC 4 cut(s) 1201, 1228, 1446, 1641
BsmI GAATGC 2 cut(s) 1594, 1868
Bso31I GGTCTC 1 cut(s) 861
BsoBI CYCGRG 2 cut(s) 131, 1660
Bsp1286I GDGCHC 4 cut(s) 227, 373, 960, 1159
Bsp143I GATC 5 cut(s) 463, 634, 1226, 1409, 1623
Bsp1720I GCTNAGC 1 cut(s) 648
BspACI CCGC 1 cut(s) 1307
BspCNI CTCAG 8 cut(s) 235, 661, 675, 722, 1132, 1378, 1522, 2111
BspFNI CGCG 1 cut(s) 1754
BspLI GGNNCC 3 cut(s) 1511, 2064, 2076
BspMAI CTGCAG 1 cut(s) 1185
BspOI GCTAGC 1 cut(s) 105
BspPI GGATC 2 cut(s) 629, 1417
BspTI CTTAAG 1 cut(s) 626
BspTNI GGTCTC 1 cut(s) 861
BsrDI GCAATG 2 cut(s) 575, 2014
BsrI ACTGG 5 cut(s) 266, 321, 496, 1124, 1440
BssECI CCNNGG 4 cut(s) 296, 431, 1659, 1660
BssMI GATC 5 cut(s) 463, 634, 1226, 1409, 1623
BssNAI GTATAC 2 cut(s) 476, 823
Bst1107I GTATAC 2 cut(s) 476, 823
Bst2UI CCWGG 3 cut(s) 257, 432, 616
Bst4CI ACNGT 7 cut(s) 353, 778, 863, 872, 1083, 1633, 1981
Bst6I CTCTTC 1 cut(s) 2036
BstAFI CTTAAG 1 cut(s) 626
BstAPI GCANNNNNTGC 1 cut(s) 1180
BstC8I GCNNGC 4 cut(s) 103, 645, 1648, 1708
BstF5I GGATG 4 cut(s) 511, 885, 1208, 1337
BstFNI CGCG 1 cut(s) 1754
BstH2I RGCGCY 1 cut(s) 808
BstHHI GCGC 2 cut(s) 807, 1756
BstKTI GATC 5 cut(s) 466, 637, 1229, 1412, 1626
BstMAI GTCTC 6 cut(s) 254, 419, 712, 767, 861, 1480
BstMBI GATC 5 cut(s) 463, 634, 1226, 1409, 1623
BstMWI GCNNNNNNNGC 7 cut(s) 436, 649, 1180, 1202, 1306, 1333, 1874
BstNI CCWGG 3 cut(s) 257, 432, 616
BstNSI RCATGY 2 cut(s) 387, 474
BstPAI GACNNNNGTC 2 cut(s) 266, 833
BstSCI CCNGG 7 cut(s) 225, 255, 296, 430, 614, 1659, 1660
BstSFI CTRYAG 4 cut(s) 816, 1181, 1540, 1583
BstSLI GKGCMC 2 cut(s) 227, 373
BstUI CGCG 1 cut(s) 1754
BstV1I GCAGC 9 cut(s) 226, 664, 701, 1192, 1284, 1320, 1411, 1630, 1904
BstV2I GAAGAC 2 cut(s) 1029, 1278
BstXI CCANNNNNNTGG 1 cut(s) 1506
BstZ17I GTATAC 2 cut(s) 476, 823
BsuI GTATCC 1 cut(s) 182
BtgZI GCGATG 2 cut(s) 1308, 1344
BtrI CACGTC 2 cut(s) 1242, 1394
BtsCI GGATG 4 cut(s) 511, 885, 1208, 1337
BtsIMutI CAGTG 3 cut(s) 373, 670, 1131
Cac8I GCNNGC 4 cut(s) 103, 645, 1648, 1708
CaiI CAGNNNCTG 1 cut(s) 905
CfoI GCGC 2 cut(s) 807, 1756
Cfr13I GGNCC 1 cut(s) 2074
Cfr9I CCCGGG 1 cut(s) 1660
CseI GACGC 1 cut(s) 1022
Csp6I GTAC 2 cut(s) 931, 1527
CspCI CAANNNNNGTGG 2 cut(s) 646, 681
CviQI GTAC 2 cut(s) 931, 1527
DpnI GATC 5 cut(s) 465, 636, 1228, 1411, 1625
DpnII GATC 5 cut(s) 463, 634, 1226, 1409, 1623
DraI TTTAAA 2 cut(s) 306, 1168
DraIII CACNNNGTG 1 cut(s) 175
Eam1104I CTCTTC 1 cut(s) 2036
EarI CTCTTC 1 cut(s) 2036
Ecl136II GAGCTC 1 cut(s) 958
Eco24I GRGCYC 1 cut(s) 960
Eco31I GGTCTC 1 cut(s) 861
Eco32I GATATC 1 cut(s) 2129
Eco47I GGWCC 1 cut(s) 2074
Eco53kI GAGCTC 1 cut(s) 958
Eco57I CTGAAG 3 cut(s) 351, 927, 1355
Eco88I CYCGRG 2 cut(s) 131, 1660
EcoICRI GAGCTC 1 cut(s) 958
EcoO109I RGGNCCY 1 cut(s) 2074
EcoRI GAATTC 2 cut(s) 126, 1968
EcoRII CCWGG 3 cut(s) 255, 430, 614
EcoRV GATATC 1 cut(s) 2129
EcoT38I GRGCYC 1 cut(s) 960
FaqI GGGAC 4 cut(s) 1201, 1228, 1446, 1641
FauNDI CATATG 1 cut(s) 1686
FbaI TGATCA 1 cut(s) 463
FblI GTMKAC 2 cut(s) 475, 822
Fnu4HI GCNGC 9 cut(s) 240, 653, 690, 1206, 1298, 1334, 1400, 1644, 1893
FokI GGATG 4 cut(s) 518, 872, 1195, 1324
FriOI GRGCYC 1 cut(s) 960
Fsp4HI GCNGC 9 cut(s) 240, 653, 690, 1206, 1298, 1334, 1400, 1644, 1893
FspBI CTAG 9 cut(s) 102, 440, 591, 966, 1314, 1350, 1610, 1994, 2006
GlaI GCGC 2 cut(s) 806, 1755
GluI GCNGC 9 cut(s) 240, 653, 690, 1206, 1298, 1334, 1400, 1644, 1893
GsuI CTGGAG 1 cut(s) 249
HaeII RGCGCY 1 cut(s) 808
HapII CCGG 4 cut(s) 227, 298, 768, 1661
HgaI GACGC 1 cut(s) 1022
HhaI GCGC 2 cut(s) 807, 1756
Hin6I GCGC 2 cut(s) 805, 1754
HinP1I GCGC 2 cut(s) 805, 1754
HincII GTYRAC 1 cut(s) 1254
HindII GTYRAC 1 cut(s) 1254
HindIII AAGCTT 4 cut(s) 276, 344, 629, 641
HinfI GANTC 3 cut(s) 262, 292, 412
HpaII CCGG 4 cut(s) 227, 298, 768, 1661
HphI GGTGA 6 cut(s) 16, 421, 1086, 1260, 1281, 1296
Hpy166II GTNNAC 5 cut(s) 371, 476, 497, 823, 1254
Hpy188I TCNGA 8 cut(s) 113, 156, 188, 208, 907, 1809, 1923, 2101
Hpy8I GTNNAC 5 cut(s) 371, 476, 497, 823, 1254
Hpy99I CGWCG 1 cut(s) 1551
HpyAV CCTTC 7 cut(s) 116, 449, 725, 971, 1376, 1545, 2040
HpyCH4III ACNGT 7 cut(s) 353, 778, 863, 872, 1083, 1633, 1981
HpyCH4IV ACGT 2 cut(s) 1241, 1393
HpyF10VI GCNNNNNNNGC 7 cut(s) 436, 649, 1180, 1202, 1306, 1333, 1874
HpySE526I ACGT 2 cut(s) 1241, 1393
HspAI GCGC 2 cut(s) 805, 1754
Ksp22I TGATCA 1 cut(s) 463
Kzo9I GATC 5 cut(s) 463, 634, 1226, 1409, 1623
LmnI GCTCC 2 cut(s) 955, 2062
Lsp1109I GCAGC 9 cut(s) 226, 664, 701, 1192, 1284, 1320, 1411, 1630, 1904
LweI GCATC 3 cut(s) 212, 802, 1217
MaeI CTAG 9 cut(s) 102, 440, 591, 966, 1314, 1350, 1610, 1994, 2006
MaeII ACGT 2 cut(s) 1241, 1393
MalI GATC 5 cut(s) 465, 636, 1228, 1411, 1625
MboI GATC 5 cut(s) 463, 634, 1226, 1409, 1623
MboII GAAGA 5 cut(s) 1034, 1278, 1465, 2050, 2053
MhlI GDGCHC 4 cut(s) 227, 373, 960, 1159
MlyI GAGTC 2 cut(s) 256, 421
MmeI TCCRAC 1 cut(s) 1387
MroXI GAANNNNTTC 2 cut(s) 126, 1143
MseI TTAA 8 cut(s) 21, 305, 348, 513, 627, 1167, 1425, 2140
MslI CAYNNNNRTG 3 cut(s) 402, 504, 1049
MspCI CTTAAG 1 cut(s) 626
MspI CCGG 4 cut(s) 227, 298, 768, 1661
MspR9I CCNGG 7 cut(s) 227, 257, 298, 432, 616, 1661, 1662
Mva1269I GAATGC 2 cut(s) 1594, 1868
MvaI CCWGG 3 cut(s) 257, 432, 616
MvnI CGCG 1 cut(s) 1754
MwoI GCNNNNNNNGC 7 cut(s) 436, 649, 1180, 1202, 1306, 1333, 1874
NciI CCSGG 4 cut(s) 227, 298, 1661, 1662
NdeI CATATG 1 cut(s) 1686
NdeII GATC 5 cut(s) 463, 634, 1226, 1409, 1623
NheI GCTAGC 1 cut(s) 101
NlaIV GGNNCC 3 cut(s) 1511, 2064, 2076
NmuCI GTSAC 7 cut(s) 4, 43, 91, 487, 668, 727, 1126
NspI RCATGY 2 cut(s) 387, 474
PaeR7I CTCGAG 1 cut(s) 131
PctI GAATGC 2 cut(s) 1594, 1868
PdmI GAANNNNTTC 2 cut(s) 126, 1143
PfeI GAWTC 1 cut(s) 292
PflFI GACNNNGTC 1 cut(s) 89
PflMI CCANNNNNTGG 1 cut(s) 1197
PkrI GCNGC 9 cut(s) 241, 654, 691, 1207, 1299, 1335, 1401, 1645, 1894
PleI GAGTC 2 cut(s) 256, 420
PpsI GAGTC 2 cut(s) 256, 420
PpuMI RGGWCCY 1 cut(s) 2074
PshAI GACNNNNGTC 2 cut(s) 266, 833
PshBI ATTAAT 1 cut(s) 21
Psp124BI GAGCTC 1 cut(s) 960
Psp5II RGGWCCY 1 cut(s) 2074
Psp6I CCWGG 3 cut(s) 255, 430, 614
PspGI CCWGG 3 cut(s) 255, 430, 614
PspN4I GGNNCC 3 cut(s) 1511, 2064, 2076
PspPI GGNCC 1 cut(s) 2074
PspPPI RGGWCCY 1 cut(s) 2074
PstI CTGCAG 1 cut(s) 1185
PstNI CAGNNNCTG 1 cut(s) 905
PsyI GACNNNGTC 1 cut(s) 89
RsaI GTAC 2 cut(s) 932, 1528
RsaNI GTAC 2 cut(s) 931, 1527
RseI CAYNNNNRTG 3 cut(s) 402, 504, 1049
SacI GAGCTC 1 cut(s) 960
SaqAI TTAA 8 cut(s) 21, 305, 348, 513, 627, 1167, 1425, 2140
SatI GCNGC 9 cut(s) 240, 653, 690, 1206, 1298, 1334, 1400, 1644, 1893
Sau3AI GATC 5 cut(s) 463, 634, 1226, 1409, 1623
Sau96I GGNCC 1 cut(s) 2074
ScaI AGTACT 1 cut(s) 1528
SchI GAGTC 2 cut(s) 256, 421
ScrFI CCNGG 7 cut(s) 227, 257, 298, 432, 616, 1661, 1662
SduI GDGCHC 4 cut(s) 227, 373, 960, 1159
SfaNI GCATC 3 cut(s) 212, 802, 1217
SfcI CTRYAG 4 cut(s) 816, 1181, 1540, 1583
Sfr274I CTCGAG 1 cut(s) 131
SinI GGWCC 1 cut(s) 2074
SlaI CTCGAG 1 cut(s) 131
SmaI CCCGGG 1 cut(s) 1662
SmiMI CAYNNNNRTG 3 cut(s) 402, 504, 1049
SmlI CTYRAG 2 cut(s) 131, 626
SmoI CTYRAG 2 cut(s) 131, 626
SpeI ACTAGT 1 cut(s) 1609
SsiI CCGC 1 cut(s) 1307
SspMI CTAG 9 cut(s) 102, 440, 591, 966, 1314, 1350, 1610, 1994, 2006
SstI GAGCTC 1 cut(s) 960
StyD4I CCNGG 7 cut(s) 225, 255, 296, 430, 614, 1659, 1660
TaaI ACNGT 7 cut(s) 353, 778, 863, 872, 1083, 1633, 1981
TaiI ACGT 2 cut(s) 1244, 1396
TaqI TCGA 6 cut(s) 75, 132, 283, 865, 1772, 2030
TatI WGTACW 1 cut(s) 1526
TfiI GAWTC 1 cut(s) 292
Tru1I TTAA 8 cut(s) 21, 305, 348, 513, 627, 1167, 1425, 2140
Tru9I TTAA 8 cut(s) 21, 305, 348, 513, 627, 1167, 1425, 2140
TscAI CASTG 3 cut(s) 373, 670, 1131
TseFI GTSAC 7 cut(s) 4, 43, 91, 487, 668, 727, 1126
TseI GCWGC 9 cut(s) 239, 652, 689, 1205, 1297, 1333, 1399, 1643, 1892
Tsp45I GTSAC 7 cut(s) 4, 43, 91, 487, 668, 727, 1126
TspMI CCCGGG 1 cut(s) 1660
TspRI CASTG 3 cut(s) 373, 670, 1131
Tth111I GACNNNGTC 1 cut(s) 89
Van91I CCANNNNNTGG 1 cut(s) 1197
Vha464I CTTAAG 1 cut(s) 626
VneI GTGCAC 1 cut(s) 369
VpaK11BI GGWCC 1 cut(s) 2074
VspI ATTAAT 1 cut(s) 21
XapI RAATTY 2 cut(s) 126, 1968
XbaI TCTAGA 1 cut(s) 965
XceI RCATGY 2 cut(s) 387, 474
XhoI CTCGAG 1 cut(s) 131
XmaI CCCGGG 1 cut(s) 1660
XmiI GTMKAC 2 cut(s) 475, 822
XmnI GAANNNNTTC 2 cut(s) 126, 1143
XspI CTAG 9 cut(s) 102, 440, 591, 966, 1314, 1350, 1610, 1994, 2006
ZrmI AGTACT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.