Prupe.3G062400_v2.0.a1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000496
Physical Location & Seq
Reverse (-)
4452932 .. 4455745
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G062400.1

Sequence Viewer

Length: 1977 bp
ATGGATACAAGGCTTGTAGAGGCAGTGAAGAGAAATGATATACCCACATTTATTAGCTTGGTGGAAAAGTATGACGGAATTCTTGAGCAAAGAGAAGCTGATACTTGCAACACACCATTACACCTTGTGTCAAAATTTGGACACCATTCCATGGTGTCTGCAATTGTCAAGTCACGGCCTGATATGGTTGCTGCTGAGAATAAGGACCTGGAAACTCCAGTCCACGAAGCTTGTCGAATAGGGAATGCAGAGGTCTTAAAGCTGTTACTTGAGGCCAATGCTGGGGCAGCTACTAAGCTTAACAGTGAAAAGAAGAGTGCACTTTTCTTGGCTTGCAGCTATGGCCATGTTGATGTGGTGAATCTCCTACTGAATGAGCCCGGGATGCTAGGTTTGGCGGAAGATGGGCTTGAAACTTGTATCTGTGTGGCTCTGTCTGGTGGACACATAGATGTTGTTGGAGAGTTGCTAAGAGTGTGTCCTGACCTTGCTTCTGCAATTGATGAGAATGGTAATTCACCATTGCACTATGCATCTAGCAAAGGGCATAGGGAGATGACCTGGATGCTCCTAAGGCTTGATCCAAAACTTGCTCAGCAATACAATAACAATGGTCACACACCATTGCACTTGGCAGCAATAAACTACAGAGCTTCAGTCATTGAAGGATTTGTCTTGATGGCTCCAGCATCTTTTCAATTTGTCACAAAAGATGGAGAGACAGTATTTCACTTGGCTGTGAAATATGGTCAATATGCTGCTTTAGTTTTCCTTATCCTTGTCTGCAATGGGATGAATCTCTTTAATTGTCGAGATCGTTTTGGTAATACCATCTTACATCTTGCAGTTTCTGGAGCACAGAATCAGATAGCAGAGTACATAATCAACAAAACAAGAGTGGAGATTAATTCTCGCAACTGTGAAGGACTCACAGCACTTGACATTCTCGTCCAGGCCAAGGACAGTGTAGAAAATCGGTGTCTTGAAGCCTTGTTCGTGAAAGCAGGAGGTAAAAGGAGCATTGAGTTGTTATCACATTCAGGAAAAGTAGATAGAGTCAGTGCTCAATCAGTGTCAATCCTTGAGAAGGTGCCAAAAAGAGCCAAATTTGTTAAAGAGCATGAATTGCAGGTTTCCATTATAAATGAAATAGTTCATCCTGCATCCAAGACCCCATCTAGTTTTTCATCACCCCTATCTAGAAAGTCATCTAGTTTGCCATCACCCCAATCTAGCAGATCTTCACCTATGCTTCCATCACCACAATCTAGGAACTCATCGCCTTGGCATGACATACGGGGGGGACTTCACTATCAACCACAAACGCCAGAGTCCCCATTGCCAACTGTTGTGAGACAACAAAAGAACCCTAGTGAGATTTTCTATGACCCCAAAAGGAAGCAGCATAAGACATATAGAGAGGCACTACAAAATGCCAGGAACACTATAACACTTGTTGCAAGTTTGATTGCAACAGTTACTTTTGCTGCTGGTATCAGCCCCCCTGGTGGTGTCGATCAGGAGGATGGGAAGTCAGTGGCAGGAAGAACAACAGCTTTCAAGGTCTTTGCAATAAGCAATTATGTTGCGCTGTTCACGTCGCTCTCGATAGTTGTTGTTCTTGTCAGTATCATCCCATATCGAAGAAAGCCATTGATAAGACTATTGGTGGTTGCTCACAAGATCATGTGGGTAGCTGTGGCATTCATGGCAACAAGTTATGTTGCAGCAACATGGGTGATCATGCCACATAGTTTAGAAAAAGAATGGGTGCTTGTAGCTTTACTGGCTGTAAGCATTGGCACTCTGGGAACAGTTTTTATTGGTCTAGGTCTAATGCTGGTTGATCATTGGCTGCGGAAGCGAAAGTGGAGAAAAGGAAGAAGAGAAGCAGGGGAGGCTAATGAAGACGCCGAAATGGGAAGCCAAAACTCAGACGTGGAGAGCTCCTACACTCTGGGATACCACTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

659

Amino Acids

72.32

Weight (kDa)

8.72

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1142
AasI GACNNNNNNGTC 1 cut(s) 947
Acc36I ACCTGC 1 cut(s) 1120
AccB1I GGYRCC 1 cut(s) 1090
AccB7I CCANNNNNTGG 1 cut(s) 151
AciI CCGC 2 cut(s) 398, 1858
AclWI GGATC 1 cut(s) 575
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 3 cut(s) 78, 134, 1106
AcuI CTGAAG 1 cut(s) 639
AcyI GRCGYC 1 cut(s) 1911
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 1 cut(s) 878
AfiI CCNNNNNNNGG 5 cut(s) 151, 282, 958, 1087, 1508
AgsI TTSAA 5 cut(s) 413, 665, 698, 986, 1561
AjiI CACGTC 2 cut(s) 1599, 1939
AjnI CCWGG 5 cut(s) 207, 560, 951, 1436, 1504
Alw21I GWGCWC 4 cut(s) 322, 859, 1066, 1949
Alw26I GTCTC 2 cut(s) 713, 1348
Alw44I GTGCAC 1 cut(s) 318
AlwI GGATC 1 cut(s) 575
AlwNI CAGNNNCTG 1 cut(s) 851
Ama87I CYCGRG 1 cut(s) 380
AoxI GGCC 4 cut(s) 176, 273, 343, 954
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 9 cut(s) 191, 287, 336, 635, 758, 1402, 1487, 1727, 1855
ApoI RAATTY 3 cut(s) 78, 134, 1106
AseI ATTAAT 1 cut(s) 906
Asp700I GAANNNNTTC 1 cut(s) 1152
AspLEI GCGC 1 cut(s) 1591
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 2 cut(s) 381, 382
AsuHPI GGTGA 7 cut(s) 370, 510, 1182, 1215, 1236, 1251, 1750
AvaI CYCGRG 1 cut(s) 380
AvaII GGWCC 1 cut(s) 205
AxyI CCTNAGG 1 cut(s) 572
BaeGI GKGCMC 1 cut(s) 322
BalI TGGCCA 1 cut(s) 345
BanI GGYRCC 1 cut(s) 1090
BanII GRGCYC 2 cut(s) 381, 1949
BbsI GAAGAC 1 cut(s) 1914
Bbv12I GWGCWC 4 cut(s) 322, 859, 1066, 1949
BbvI GCAGC 9 cut(s) 178, 299, 348, 647, 745, 1414, 1474, 1739, 1842
BccI CCATC 8 cut(s) 398, 673, 707, 839, 1183, 1228, 1264, 1520
BceAI ACGGC 1 cut(s) 191
BciT130I CCWGG 5 cut(s) 209, 562, 953, 1438, 1506
BciVI GTATCC 1 cut(s) 1955
BclI TGATCA 2 cut(s) 1740, 1846
BcnI CCSGG 2 cut(s) 381, 382
BcoDI GTCTC 2 cut(s) 713, 1348
BfaI CTAG 9 cut(s) 389, 537, 1179, 1200, 1212, 1233, 1269, 1371, 1829
BfmI CTRYAG 1 cut(s) 646
BfuAI ACCTGC 1 cut(s) 1120
BfuI GTATCC 1 cut(s) 1955
BglII AGATCT 1 cut(s) 1238
BisI GCNGC 9 cut(s) 192, 288, 337, 636, 759, 1403, 1488, 1728, 1856
BlpI GCTNAGC 1 cut(s) 594
BlsI GCNGC 9 cut(s) 193, 289, 338, 637, 760, 1404, 1489, 1729, 1857
Bme1390I CCNGG 7 cut(s) 209, 381, 382, 562, 953, 1438, 1506
Bme18I GGWCC 1 cut(s) 205
BmeT110I CYCGRG 1 cut(s) 380
BmgBI CACGTC 2 cut(s) 1599, 1939
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 684, 1092
BmrFI CCNGG 7 cut(s) 209, 381, 382, 562, 953, 1438, 1506
BmsI GCATC 5 cut(s) 375, 542, 555, 698, 1172
BpiI GAAGAC 1 cut(s) 1914
BpmI CTGGAG 3 cut(s) 201, 669, 873
Bpu1102I GCTNAGC 1 cut(s) 594
BpuEI CTTGAG 3 cut(s) 104, 290, 1103
BpuMI CCSGG 2 cut(s) 381, 382
BsaHI GRCGYC 1 cut(s) 1911
BsaJI CCNNGG 5 cut(s) 150, 380, 957, 1283, 1504
BsaXI ACNNNNNCTCC 2 cut(s) 708, 738
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 282, 958, 1087, 1508
Bse1I ACTGG 2 cut(s) 218, 1791
Bse21I CCTNAGG 1 cut(s) 572
Bse3DI GCAATG 4 cut(s) 521, 623, 793, 1337
BseBI CCWGG 5 cut(s) 209, 562, 953, 1438, 1506
BseDI CCNNGG 5 cut(s) 150, 380, 957, 1283, 1504
BseGI GGATG 7 cut(s) 390, 570, 798, 1156, 1163, 1531, 1632
BseLI CCNNNNNNNGG 5 cut(s) 151, 282, 958, 1087, 1508
BseMI GCAATG 4 cut(s) 521, 623, 793, 1337
BseMII CTCAG 3 cut(s) 186, 608, 1947
BseNI ACTGG 2 cut(s) 218, 1791
BseSI GKGCMC 1 cut(s) 322
BseXI GCAGC 9 cut(s) 178, 299, 348, 647, 745, 1414, 1474, 1739, 1842
BseYI CCCAGC 1 cut(s) 281
BshFI GGCC 4 cut(s) 178, 275, 345, 956
BshNI GGYRCC 1 cut(s) 1090
BsiHKAI GWGCWC 4 cut(s) 322, 859, 1066, 1949
BsiHKCI CYCGRG 1 cut(s) 380
BsiSI CCGG 1 cut(s) 381
BslFI GGGAC 2 cut(s) 1317, 1318
BslI CCNNNNNNNGG 5 cut(s) 151, 282, 958, 1087, 1508
BsmAI GTCTC 2 cut(s) 713, 1348
BsmFI GGGAC 2 cut(s) 1317, 1318
BsmI GAATGC 2 cut(s) 250, 1703
BsnI GGCC 4 cut(s) 178, 275, 345, 956
BsoBI CYCGRG 1 cut(s) 380
Bsp1286I GDGCHC 5 cut(s) 322, 381, 859, 1066, 1949
Bsp143I GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
Bsp1720I GCTNAGC 1 cut(s) 594
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 2 cut(s) 398, 1858
BspANI GGCC 4 cut(s) 178, 275, 345, 956
BspCNI CTCAG 3 cut(s) 187, 607, 1946
BspLI GGNNCC 2 cut(s) 684, 1092
BspMI ACCTGC 1 cut(s) 1120
BspPI GGATC 1 cut(s) 575
BspT107I GGYRCC 1 cut(s) 1090
BsrDI GCAATG 4 cut(s) 521, 623, 793, 1337
BsrI ACTGG 2 cut(s) 218, 1791
BssECI CCNNGG 5 cut(s) 150, 380, 957, 1283, 1504
BssMI GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
BssNI GRCGYC 1 cut(s) 1911
BssT1I CCWWGG 3 cut(s) 150, 957, 1283
Bst2UI CCWGG 5 cut(s) 209, 562, 953, 1438, 1506
Bst4CI ACNGT 7 cut(s) 305, 724, 920, 965, 1348, 1477, 1816
Bst6I CTCTTC 3 cut(s) 23, 308, 1879
BstACI GRCGYC 1 cut(s) 1911
BstAPI GCANNNNNTGC 1 cut(s) 1126
BstC8I GCNNGC 1 cut(s) 334
BstDEI CTNAG 6 cut(s) 195, 294, 470, 572, 594, 1933
BstDSI CCRYGG 1 cut(s) 150
BstENI CCTNNNNNAGG 1 cut(s) 1085
BstF5I GGATG 7 cut(s) 390, 570, 798, 1156, 1163, 1531, 1632
BstHHI GCGC 1 cut(s) 1591
BstKTI GATC 7 cut(s) 583, 817, 1241, 1519, 1686, 1743, 1849
BstMAI GTCTC 2 cut(s) 713, 1348
BstMBI GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
BstMWI GCNNNNNNNGC 9 cut(s) 287, 342, 385, 574, 1126, 1709, 1787, 1861, 1898
BstNI CCWGG 5 cut(s) 209, 562, 953, 1438, 1506
BstSCI CCNGG 7 cut(s) 207, 379, 380, 560, 951, 1436, 1504
BstSFI CTRYAG 1 cut(s) 646
BstSLI GKGCMC 1 cut(s) 322
BstV1I GCAGC 9 cut(s) 178, 299, 348, 647, 745, 1414, 1474, 1739, 1842
BstV2I GAAGAC 1 cut(s) 1914
BstX2I RGATCY 1 cut(s) 1238
BstYI RGATCY 1 cut(s) 1238
Bsu36I CCTNAGG 1 cut(s) 572
BsuI GTATCC 1 cut(s) 1955
BsuRI GGCC 4 cut(s) 178, 275, 345, 956
BtgI CCRYGG 1 cut(s) 150
BtgZI GCGATG 1 cut(s) 1263
BtrI CACGTC 2 cut(s) 1599, 1939
BtsCI GGATG 7 cut(s) 390, 570, 798, 1156, 1163, 1531, 1632
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 6 cut(s) 30, 310, 970, 1066, 1077, 1542
BveI ACCTGC 1 cut(s) 1120
Cac8I GCNNGC 1 cut(s) 334
CaiI CAGNNNCTG 1 cut(s) 851
CfoI GCGC 1 cut(s) 1591
Cfr13I GGNCC 1 cut(s) 205
Cfr9I CCCGGG 1 cut(s) 380
CseI GACGC 1 cut(s) 1919
Csp6I GTAC 1 cut(s) 877
CspCI CAANNNNNGTGG 2 cut(s) 212, 247
CviAII CATG 8 cut(s) 151, 347, 1121, 1289, 1687, 1708, 1734, 1744
CviQI GTAC 1 cut(s) 877
DdeI CTNAG 6 cut(s) 195, 294, 470, 572, 594, 1933
DpnI GATC 7 cut(s) 582, 816, 1240, 1518, 1685, 1742, 1848
DpnII GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
DraIII CACNNNGTG 1 cut(s) 127
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 3 cut(s) 23, 308, 1879
EarI CTCTTC 3 cut(s) 23, 308, 1879
EciI GGCGGA 1 cut(s) 413
Ecl136II GAGCTC 1 cut(s) 1947
Eco130I CCWWGG 3 cut(s) 150, 957, 1283
Eco24I GRGCYC 2 cut(s) 381, 1949
Eco47I GGWCC 1 cut(s) 205
Eco53kI GAGCTC 1 cut(s) 1947
Eco57I CTGAAG 1 cut(s) 639
Eco81I CCTNAGG 1 cut(s) 572
Eco88I CYCGRG 1 cut(s) 380
EcoICRI GAGCTC 1 cut(s) 1947
EcoNI CCTNNNNNAGG 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 78
EcoRII CCWGG 5 cut(s) 207, 560, 951, 1436, 1504
EcoT14I CCWWGG 3 cut(s) 150, 957, 1283
EcoT22I ATGCAT 1 cut(s) 535
EcoT38I GRGCYC 2 cut(s) 381, 1949
ErhI CCWWGG 3 cut(s) 150, 957, 1283
FaeI CATG 8 cut(s) 154, 350, 1124, 1292, 1690, 1711, 1737, 1747
FalI AAGNNNNNCTT 2 cut(s) 393, 425
FaqI GGGAC 2 cut(s) 1317, 1318
FatI CATG 8 cut(s) 150, 346, 1120, 1288, 1686, 1707, 1733, 1743
FbaI TGATCA 2 cut(s) 1740, 1846
Fnu4HI GCNGC 9 cut(s) 192, 288, 337, 636, 759, 1403, 1488, 1728, 1856
FokI GGATG 7 cut(s) 397, 577, 805, 1143, 1150, 1538, 1619
FriOI GRGCYC 2 cut(s) 381, 1949
Fsp4HI GCNGC 9 cut(s) 192, 288, 337, 636, 759, 1403, 1488, 1728, 1856
FspBI CTAG 9 cut(s) 389, 537, 1179, 1200, 1212, 1233, 1269, 1371, 1829
GlaI GCGC 1 cut(s) 1590
GluI GCNGC 9 cut(s) 192, 288, 337, 636, 759, 1403, 1488, 1728, 1856
GsaI CCCAGC 1 cut(s) 285
GsuI CTGGAG 3 cut(s) 201, 669, 873
HaeIII GGCC 4 cut(s) 178, 275, 345, 956
HapII CCGG 1 cut(s) 381
HgaI GACGC 1 cut(s) 1919
HhaI GCGC 1 cut(s) 1591
Hin1I GRCGYC 1 cut(s) 1911
Hin1II CATG 8 cut(s) 154, 350, 1124, 1292, 1690, 1711, 1737, 1747
Hin6I GCGC 1 cut(s) 1589
HinP1I GCGC 1 cut(s) 1589
HindIII AAGCTT 2 cut(s) 228, 296
HinfI GANTC 6 cut(s) 361, 796, 862, 927, 1056, 1331
HpaII CCGG 1 cut(s) 381
HphI GGTGA 7 cut(s) 370, 510, 1182, 1215, 1236, 1251, 1750
Hpy166II GTNNAC 4 cut(s) 223, 320, 443, 1596
Hpy188I TCNGA 2 cut(s) 867, 1936
Hpy8I GTNNAC 4 cut(s) 223, 320, 443, 1596
Hpy99I CGWCG 1 cut(s) 1603
HpyAV CCTTC 3 cut(s) 659, 917, 1081
HpyCH4III ACNGT 7 cut(s) 305, 724, 920, 965, 1348, 1477, 1816
HpyCH4IV ACGT 2 cut(s) 1598, 1938
HpyF10VI GCNNNNNNNGC 9 cut(s) 287, 342, 385, 574, 1126, 1709, 1787, 1861, 1898
HpyF3I CTNAG 6 cut(s) 195, 294, 470, 572, 594, 1933
HpySE526I ACGT 2 cut(s) 1598, 1938
Hsp92I GRCGYC 1 cut(s) 1911
Hsp92II CATG 8 cut(s) 154, 350, 1124, 1292, 1690, 1711, 1737, 1747
HspAI GCGC 1 cut(s) 1589
Ksp22I TGATCA 2 cut(s) 1740, 1846
Kzo9I GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
LmnI GCTCC 5 cut(s) 573, 688, 854, 1017, 1952
Lsp1109I GCAGC 9 cut(s) 178, 299, 348, 647, 745, 1414, 1474, 1739, 1842
LweI GCATC 5 cut(s) 375, 542, 555, 698, 1172
MaeI CTAG 9 cut(s) 389, 537, 1179, 1200, 1212, 1233, 1269, 1371, 1829
MaeII ACGT 2 cut(s) 1598, 1938
MaeIII GTNAC 5 cut(s) 171, 264, 614, 703, 1477
MalI GATC 7 cut(s) 582, 816, 1240, 1518, 1685, 1742, 1848
MboI GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
MboII GAAGA 9 cut(s) 40, 325, 413, 1233, 1557, 1656, 1893, 1896, 1919
MfeI CAATTG 2 cut(s) 162, 498
MflI RGATCY 1 cut(s) 1238
MhlI GDGCHC 5 cut(s) 322, 381, 859, 1066, 1949
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 3 cut(s) 921, 1065, 1340
MmeI TCCRAC 1 cut(s) 439
MnlI CCTC 7 cut(s) 13, 244, 265, 1001, 1414, 1516, 1891
Mox20I TGGCCA 1 cut(s) 345
Mph1103I ATGCAT 1 cut(s) 535
MroXI GAANNNNTTC 1 cut(s) 1152
MscI TGGCCA 1 cut(s) 345
MseI TTAA 5 cut(s) 257, 300, 804, 906, 1113
MslI CAYNNNNRTG 2 cut(s) 351, 450
Msp20I TGGCCA 1 cut(s) 345
MspI CCGG 1 cut(s) 381
MspR9I CCNGG 7 cut(s) 209, 381, 382, 562, 953, 1438, 1506
MunI CAATTG 2 cut(s) 162, 498
Mva1269I GAATGC 2 cut(s) 250, 1703
MvaI CCWGG 5 cut(s) 209, 562, 953, 1438, 1506
MwoI GCNNNNNNNGC 9 cut(s) 287, 342, 385, 574, 1126, 1709, 1787, 1861, 1898
NciI CCSGG 2 cut(s) 381, 382
NcoI CCATGG 1 cut(s) 150
NdeII GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
NlaIII CATG 8 cut(s) 154, 350, 1124, 1292, 1690, 1711, 1737, 1747
NlaIV GGNNCC 2 cut(s) 684, 1092
NmuCI GTSAC 3 cut(s) 171, 614, 703
NsiI ATGCAT 1 cut(s) 535
PcsI WCGNNNNNNNCGW 1 cut(s) 1604
PctI GAATGC 2 cut(s) 250, 1703
PdmI GAANNNNTTC 1 cut(s) 1152
PfeI GAWTC 3 cut(s) 361, 796, 862
PflMI CCANNNNNTGG 1 cut(s) 151
PkrI GCNGC 9 cut(s) 193, 289, 338, 637, 760, 1404, 1489, 1729, 1857
PleI GAGTC 3 cut(s) 921, 1064, 1339
PpsI GAGTC 3 cut(s) 921, 1064, 1339
PpuMI RGGWCCY 1 cut(s) 205
PshBI ATTAAT 1 cut(s) 906
PsiI TTATAA 1 cut(s) 1142
Psp124BI GAGCTC 1 cut(s) 1949
Psp5II RGGWCCY 1 cut(s) 205
Psp6I CCWGG 5 cut(s) 207, 560, 951, 1436, 1504
PspFI CCCAGC 1 cut(s) 281
PspGI CCWGG 5 cut(s) 207, 560, 951, 1436, 1504
PspN4I GGNNCC 2 cut(s) 684, 1092
PspPI GGNCC 1 cut(s) 205
PspPPI RGGWCCY 1 cut(s) 205
PstNI CAGNNNCTG 1 cut(s) 851
PsuI RGATCY 1 cut(s) 1238
RsaI GTAC 1 cut(s) 878
RsaNI GTAC 1 cut(s) 877
RseI CAYNNNNRTG 2 cut(s) 351, 450
SacI GAGCTC 1 cut(s) 1949
SaqAI TTAA 5 cut(s) 257, 300, 804, 906, 1113
SatI GCNGC 9 cut(s) 192, 288, 337, 636, 759, 1403, 1488, 1728, 1856
Sau3AI GATC 7 cut(s) 580, 814, 1238, 1516, 1683, 1740, 1846
Sau96I GGNCC 1 cut(s) 205
SchI GAGTC 3 cut(s) 921, 1065, 1340
ScrFI CCNGG 7 cut(s) 209, 381, 382, 562, 953, 1438, 1506
SduI GDGCHC 5 cut(s) 322, 381, 859, 1066, 1949
SfaNI GCATC 5 cut(s) 375, 542, 555, 698, 1172
SfcI CTRYAG 1 cut(s) 646
SinI GGWCC 1 cut(s) 205
SmaI CCCGGG 1 cut(s) 382
SmiMI CAYNNNNRTG 2 cut(s) 351, 450
SmlI CTYRAG 3 cut(s) 83, 269, 1082
SmoI CTYRAG 3 cut(s) 83, 269, 1082
SsiI CCGC 2 cut(s) 398, 1858
SspMI CTAG 9 cut(s) 389, 537, 1179, 1200, 1212, 1233, 1269, 1371, 1829
SstI GAGCTC 1 cut(s) 1949
StyD4I CCNGG 7 cut(s) 207, 379, 380, 560, 951, 1436, 1504
StyI CCWWGG 3 cut(s) 150, 957, 1283
TaaI ACNGT 7 cut(s) 305, 724, 920, 965, 1348, 1477, 1816
TaiI ACGT 2 cut(s) 1601, 1941
TaqI TCGA 5 cut(s) 235, 811, 1515, 1607, 1642
TatI WGTACW 1 cut(s) 876
TfiI GAWTC 3 cut(s) 361, 796, 862
Tru1I TTAA 5 cut(s) 257, 300, 804, 906, 1113
Tru9I TTAA 5 cut(s) 257, 300, 804, 906, 1113
TscAI CASTG 6 cut(s) 30, 310, 970, 1066, 1077, 1542
TseFI GTSAC 3 cut(s) 171, 614, 703
TseI GCWGC 9 cut(s) 191, 287, 336, 635, 758, 1402, 1487, 1727, 1855
Tsp45I GTSAC 3 cut(s) 171, 614, 703
TspDTI ATGAA 7 cut(s) 809, 1137, 1145, 1161, 1176, 1696, 1920
TspGWI ACGGA 1 cut(s) 90
TspMI CCCGGG 1 cut(s) 380
TspRI CASTG 6 cut(s) 30, 310, 970, 1066, 1077, 1542
Van91I CCANNNNNTGG 1 cut(s) 151
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 1 cut(s) 205
VspI ATTAAT 1 cut(s) 906
XagI CCTNNNNNAGG 1 cut(s) 1085
XapI RAATTY 3 cut(s) 78, 134, 1106
XbaI TCTAGA 1 cut(s) 1199
XmaI CCCGGG 1 cut(s) 380
XmnI GAANNNNTTC 1 cut(s) 1152
XspI CTAG 9 cut(s) 389, 537, 1179, 1200, 1212, 1233, 1269, 1371, 1829
Zsp2I ATGCAT 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.