Rh2BG420100

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000496
Physical Location & Seq
Forward (+)
59147731 .. 59151037
3307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG420100.1

Sequence Viewer

Length: 1995 bp
ATGGATTCTAGACTTTTAGTGGCAATTAAGAGAAATGACATACCCACATTTAGCCGGTTAGTCAAAAAAAACAAAGGAATTCTTGAGCAGAGAGAAGCTGATACTTGGAACACACCGTTACACCTTGTGTCAAAGTTTGGTCATGCTGACATGGTGTCTGAAATTGTCACGTCACGCCCTGAAATGGTTGCTGCTGAGAATAAGGGCCTGGAGACTCCTGTTCATGAAGCTTGTCAAATAGGGAATGCCGAGATCTTGAAGCTGTTACTAAATGCCAATCCTGGGGCAGCTCATAAGCTTAACACCGAAAAGAAGAGTGCCCTTTTCTTGGCTTGCAGCTATGGCCATGTTGATGCGGTGAATGTCCTCCTGAATGAGCCTGGGATGCTGGATTTGATCGAAGATGGGATTGATCAAACTTGCATCCATGCTGCTGTGTTTGGTGGACACATAGGTGTTGTTAGAGAGTTGTTACGTGTTTGTCCTGGCCTTGCAACTAGGATTGATGAGAATGGAAACTCACCATTGCACTATGCATCTGAAAAAGGACACAGGGAGATAACCTGGGCACTCTTAAGGCTCGATCCAAAACTTGCTCAGCAATACAATAACAATGGTTACACACCGTTGCACTTGGCAACGACAAACTACAGAGCTTCAGTCATTGAAGGATTTGTCTTCATGGCTCCTGCATCTTTTCATTTAGGCACAAAAGATGGAGAGACAGTGTTTCACTTGGCTGTGAGATTTGGCCTATATGATGCTTTAGTTTTCTTGATCCTTGTCTGCAATGGCATGAATCTCTTTGGTTGTCGAGATCGTGATGGAAACACCATCTTACATCTTGCAGTTTCTGGAGCACAACATCAGATAGCAGAGTACCTCCTCAACAAAACACGAGTGGAGATCAACTGTCGAAATTGCAGAGGACACACAGCACTTGACATTCTTGACCAGGCCAAGGACAGTCTAGAAAATCGGCATCTTGCAGCCATATTCATGAAAGCAGGAGGTAAAAGGAGCACGGAGTTGTTATCTCAATCAGAAAATGCAGGTAGAGTCAATGCAGTGACTCCCCTTGACAATATGCCAAAAAGAGCCCAATTTGTTACAAAGCATGAATTGCAGTTGACCACTAAAAATCATGAAATATGTTCTTCCCCTGCATCCAATACCCCATCTAGTTTTTCATCACCCATGTCAAGAAACTCATCTAGTTTTCCATCACCTCATGATTCTAGCCGGTCATCGCCTAATCTGCCATCACCACAGACTAACAACTCATCGCCTCATCAACATCCAGTAAGGGGGGTGTTTGACAATAAAATTCAAATGCCGGAGCCCATGGTGTCTACCATGGTGACACAACACAAGCCTCCTAGTGAGAATTTTTATGAACCCCGAAGGAAGCAGCATAAGGCACATAGAGAGGCATTACAAAATGCCAGGAACACTATAATACTAGTTGCCAGTTTGATTGCCACAGTTACTTTTGCCGCTGGCATCAACCCCCCGGGTGGTGTTTATCAGGAGGGACTAATGAAAGGGAAGTCAATTGCAGGAAAAACAACAGCTTTCAAGGTCTTTGCAATAAGCAATCATGTTGCGCTGTTCACATCACTCTCCATAGTTGTTGTTGTTGTCAGTATCATCCCCTATCAGAGAAAGCCATTGACACGACTATTGGTGGTTGCTCACAAGGTCATGTGGGTAGCTGTTGCATTCATGGCAACAAGTTATGTTACAGCAACATGGGTGATCTTGCCACATAGTGAGCTTAAAGAATTGGTGTTTGTAGCTTTATTGGCTGTGAGCATTGGCAGTTTGGGAACGGCTTTTATTTGTCTTAGTGTGATGCTAGTTAATCACTGGCTGAGGAAATCGAAGTGGAGAAAGGAAAGAAGAGAAAGAGGAGAGGCTAATGCAGACCTTGAAATGGGAAGCCAAAATTCAGACATGGAGAGCACATACAATCTGGGATATCACTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

664

Amino Acids

73.29

Weight (kDa)

9.04

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 93 3.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 71 - 125 2.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 81 - 158 1.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 108 - 193 1.4e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 142 - 218 1.9e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 244 - 315 5.6e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 271 - 316 6.1e-06 Ankyrin repeats (many copies)
PGG PF13962 477 - 586 5.8e-30 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1043
AccI GTMKAC 1 cut(s) 1352
AciI CCGC 2 cut(s) 356, 1497
AclWI GGATC 2 cut(s) 578, 772
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 4 cut(s) 78, 1326, 1387, 1948
AcuI CTGAAG 1 cut(s) 642
AdeI CACNNNGTG 2 cut(s) 127, 1772
AfaI GTAC 1 cut(s) 881
AfiI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1307, 1517, 1936
AflII CTTAAG 1 cut(s) 574
AflIII ACRYGT 1 cut(s) 475
AgsI TTSAA 5 cut(s) 259, 668, 1331, 1579, 1934
AhdI GACNNNNNGTC 1 cut(s) 154
AhlI ACTAGT 1 cut(s) 1462
AjiI CACGTC 1 cut(s) 171
AjnI CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1445
AleI CACNNNNGTG 1 cut(s) 453
Alw21I GWGCWC 3 cut(s) 862, 1025, 1967
Alw26I GTCTC 2 cut(s) 206, 716
AlwI GGATC 2 cut(s) 578, 772
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 1513
AoxI GGCC 5 cut(s) 205, 343, 487, 751, 957
ApeKI GCWGC 6 cut(s) 191, 287, 336, 431, 989, 1411
ApoI RAATTY 4 cut(s) 78, 1326, 1387, 1948
AspLEI GCGC 1 cut(s) 1609
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 2 cut(s) 1514, 1515
AsuHPI GGTGA 7 cut(s) 370, 513, 1185, 1218, 1257, 1372, 1768
AvaI CYCGRG 1 cut(s) 1513
BaeGI GKGCMC 2 cut(s) 322, 571
BalI TGGCCA 1 cut(s) 345
BanII GRGCYC 2 cut(s) 1102, 1344
BauI CACGAG 1 cut(s) 897
BbsI GAAGAC 1 cut(s) 670
Bbv12I GWGCWC 3 cut(s) 862, 1025, 1967
BbvCI CCTCAGC 1 cut(s) 1874
BbvI GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1423
BccI CCATC 7 cut(s) 398, 710, 818, 842, 1186, 1231, 1270
BceAI ACGGC 1 cut(s) 1848
BciT130I CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1447
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 2 cut(s) 1514, 1515
BcoDI GTCTC 2 cut(s) 206, 716
BcuI ACTAGT 1 cut(s) 1462
BfaI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1239, 1380, 1463, 1859
BfmI CTRYAG 1 cut(s) 649
BfrI CTTAAG 1 cut(s) 574
BfuAI ACCTGC 1 cut(s) 1043
BglII AGATCT 1 cut(s) 252
BisI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1412, 1497
BlpI GCTNAGC 1 cut(s) 597
BlsI GCNGC 7 cut(s) 193, 289, 338, 433, 991, 1413, 1498
Bme1390I CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1447, 1514, 1515
BmeRI GACNNNNNGTC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 1513
BmgBI CACGTC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 687, 1341
BmrFI CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1447, 1514, 1515
BpiI GAAGAC 1 cut(s) 670
BpmI CTGGAG 2 cut(s) 230, 876
Bpu10I CCTNAGC 1 cut(s) 1874
Bpu1102I GCTNAGC 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 104
BpuMI CCSGG 2 cut(s) 1514, 1515
BsaAI YACGTR 1 cut(s) 476
BsaJI CCNNGG 8 cut(s) 281, 380, 564, 960, 1344, 1356, 1512, 1513
BsaXI ACNNNNNCTCC 2 cut(s) 711, 741
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1307, 1517, 1936
Bse118I RCCGGY 2 cut(s) 54, 1242
Bse1I ACTGG 3 cut(s) 1301, 1470, 1874
Bse3DI GCAATG 2 cut(s) 524, 796
BseBI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1447
BseDI CCNNGG 8 cut(s) 281, 380, 564, 960, 1344, 1356, 1512, 1513
BseGI GGATG 5 cut(s) 390, 423, 1166, 1297, 1650
BseLI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1307, 1517, 1936
BseMI GCAATG 2 cut(s) 524, 796
BseMII CTCAG 3 cut(s) 186, 611, 1865
BseNI ACTGG 3 cut(s) 1301, 1470, 1874
BseRI GAGGAG 2 cut(s) 875, 1926
BseSI GKGCMC 2 cut(s) 322, 571
BseXI GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1423
BshFI GGCC 5 cut(s) 207, 345, 489, 753, 959
BsiHKAI GWGCWC 3 cut(s) 862, 1025, 1967
BsiHKCI CYCGRG 1 cut(s) 1513
BsiSI CCGG 4 cut(s) 55, 1243, 1337, 1514
BslFI GGGAC 1 cut(s) 1548
BslI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1307, 1517, 1936
BsmAI GTCTC 2 cut(s) 206, 716
BsmFI GGGAC 1 cut(s) 1548
BsmI GAATGC 2 cut(s) 250, 1721
BsnI GGCC 5 cut(s) 207, 345, 489, 753, 959
BsoBI CYCGRG 1 cut(s) 1513
Bsp1286I GDGCHC 7 cut(s) 322, 571, 862, 1025, 1102, 1344, 1967
Bsp143I GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
Bsp1720I GCTNAGC 1 cut(s) 597
Bsp19I CCATGG 2 cut(s) 1344, 1356
BspACI CCGC 2 cut(s) 356, 1497
BspANI GGCC 5 cut(s) 207, 345, 489, 753, 959
BspCNI CTCAG 3 cut(s) 187, 610, 1866
BspHI TCATGA 4 cut(s) 223, 999, 1144, 1231
BspLI GGNNCC 2 cut(s) 687, 1341
BspMI ACCTGC 1 cut(s) 1043
BspPI GGATC 2 cut(s) 578, 772
BspTI CTTAAG 1 cut(s) 574
BsrDI GCAATG 2 cut(s) 524, 796
BsrFI RCCGGY 2 cut(s) 54, 1242
BsrI ACTGG 3 cut(s) 1301, 1470, 1874
BssAI RCCGGY 2 cut(s) 54, 1242
BssECI CCNNGG 8 cut(s) 281, 380, 564, 960, 1344, 1356, 1512, 1513
BssMI GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
BssSI CACGAG 1 cut(s) 897
BssT1I CCWWGG 3 cut(s) 960, 1344, 1356
Bst2BI CACGAG 1 cut(s) 897
Bst2UI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1447
Bst4CI ACNGT 6 cut(s) 117, 627, 727, 914, 968, 1486
Bst6I CTCTTC 2 cut(s) 308, 1897
BstAFI CTTAAG 1 cut(s) 574
BstAPI GCANNNNNTGC 1 cut(s) 1123
BstBAI YACGTR 1 cut(s) 476
BstC8I GCNNGC 2 cut(s) 334, 1501
BstDEI CTNAG 4 cut(s) 195, 597, 1847, 1874
BstDSI CCRYGG 2 cut(s) 1344, 1356
BstF5I GGATG 5 cut(s) 390, 423, 1166, 1297, 1650
BstHHI GCGC 1 cut(s) 1609
BstKTI GATC 8 cut(s) 255, 399, 415, 586, 780, 820, 909, 1761
BstMAI GTCTC 2 cut(s) 206, 716
BstMBI GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
BstMWI GCNNNNNNNGC 6 cut(s) 342, 385, 1123, 1258, 1727, 1805
BstNI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1447
BstSCI CCNGG 9 cut(s) 207, 280, 379, 484, 563, 954, 1445, 1512, 1513
BstSFI CTRYAG 1 cut(s) 649
BstSLI GKGCMC 2 cut(s) 322, 571
BstV1I GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1423
BstV2I GAAGAC 1 cut(s) 670
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 5 cut(s) 207, 345, 489, 753, 959
BtgI CCRYGG 2 cut(s) 1344, 1356
BtgZI GCGATG 2 cut(s) 1233, 1269
BtrI CACGTC 1 cut(s) 171
BtsCI GGATG 5 cut(s) 390, 423, 1166, 1297, 1650
BtsI GCAGTG 1 cut(s) 1074
BtsIMutI CAGTG 3 cut(s) 732, 1074, 1867
BveI ACCTGC 1 cut(s) 1043
Cac8I GCNNGC 2 cut(s) 334, 1501
CaiI CAGNNNCTG 1 cut(s) 854
CciI TCATGA 4 cut(s) 223, 999, 1144, 1231
CfoI GCGC 1 cut(s) 1609
Cfr10I RCCGGY 2 cut(s) 54, 1242
Cfr13I GGNCC 1 cut(s) 205
Cfr9I CCCGGG 1 cut(s) 1513
Csp6I GTAC 1 cut(s) 880
CviQI GTAC 1 cut(s) 880
DdeI CTNAG 4 cut(s) 195, 597, 1847, 1874
DpnI GATC 8 cut(s) 254, 398, 414, 585, 779, 819, 908, 1760
DpnII GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
DraIII CACNNNGTG 2 cut(s) 127, 1772
DriI GACNNNNNGTC 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 2 cut(s) 308, 1897
Eam1105I GACNNNNNGTC 1 cut(s) 154
EarI CTCTTC 2 cut(s) 308, 1897
Eco130I CCWWGG 3 cut(s) 960, 1344, 1356
Eco24I GRGCYC 2 cut(s) 1102, 1344
Eco32I GATATC 1 cut(s) 1982
Eco57I CTGAAG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 1513
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 78
EcoRII CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1445
EcoRV GATATC 1 cut(s) 1982
EcoT14I CCWWGG 3 cut(s) 960, 1344, 1356
EcoT22I ATGCAT 1 cut(s) 538
EcoT38I GRGCYC 2 cut(s) 1102, 1344
ErhI CCWWGG 3 cut(s) 960, 1344, 1356
FalI AAGNNNNNCTT 2 cut(s) 66, 98
FaqI GGGAC 1 cut(s) 1548
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 1352
Fnu4HI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1412, 1497
FokI GGATG 5 cut(s) 397, 410, 1153, 1284, 1637
FriOI GRGCYC 2 cut(s) 1102, 1344
Fsp4HI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1412, 1497
FspBI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1239, 1380, 1463, 1859
GlaI GCGC 1 cut(s) 1608
GluI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1412, 1497
GsuI CTGGAG 2 cut(s) 230, 876
HaeIII GGCC 5 cut(s) 207, 345, 489, 753, 959
HapII CCGG 4 cut(s) 55, 1243, 1337, 1514
HhaI GCGC 1 cut(s) 1609
Hin6I GCGC 1 cut(s) 1607
HinP1I GCGC 1 cut(s) 1607
HincII GTYRAC 1 cut(s) 1131
HindII GTYRAC 1 cut(s) 1131
HindIII AAGCTT 2 cut(s) 228, 296
HinfI GANTC 6 cut(s) 5, 214, 799, 1059, 1072, 1235
HpaII CCGG 4 cut(s) 55, 1243, 1337, 1514
HphI GGTGA 7 cut(s) 370, 513, 1185, 1218, 1257, 1372, 1768
Hpy166II GTNNAC 4 cut(s) 446, 1131, 1353, 1614
Hpy188I TCNGA 6 cut(s) 160, 541, 870, 1045, 1662, 1954
Hpy8I GTNNAC 4 cut(s) 446, 1131, 1353, 1614
HpyAV CCTTC 2 cut(s) 662, 1398
HpyCH4III ACNGT 6 cut(s) 117, 627, 727, 914, 968, 1486
HpyCH4IV ACGT 2 cut(s) 170, 475
HpyF10VI GCNNNNNNNGC 6 cut(s) 342, 385, 1123, 1258, 1727, 1805
HpyF3I CTNAG 4 cut(s) 195, 597, 1847, 1874
HpySE526I ACGT 2 cut(s) 170, 475
HspAI GCGC 1 cut(s) 1607
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
LmnI GCTCC 4 cut(s) 691, 857, 1020, 1339
Lsp1109I GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1423
MaeI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1239, 1380, 1463, 1859
MaeII ACGT 2 cut(s) 170, 475
MalI GATC 8 cut(s) 254, 398, 414, 585, 779, 819, 908, 1760
MboI GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
MboII GAAGA 5 cut(s) 325, 413, 670, 1149, 1914
MfeI CAATTG 1 cut(s) 1554
MflI RGATCY 1 cut(s) 252
MhlI GDGCHC 7 cut(s) 322, 571, 862, 1025, 1102, 1344, 1967
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 3 cut(s) 208, 1066, 1068
Mox20I TGGCCA 1 cut(s) 345
Mph1103I ATGCAT 1 cut(s) 538
MscI TGGCCA 1 cut(s) 345
MseI TTAA 5 cut(s) 27, 300, 575, 1779, 1863
MslI CAYNNNNRTG 3 cut(s) 351, 453, 998
Msp20I TGGCCA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 1499
MspCI CTTAAG 1 cut(s) 574
MspI CCGG 4 cut(s) 55, 1243, 1337, 1514
MspR9I CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1447, 1514, 1515
MunI CAATTG 1 cut(s) 1554
Mva1269I GAATGC 2 cut(s) 250, 1721
MvaI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1447
MwoI GCNNNNNNNGC 6 cut(s) 342, 385, 1123, 1258, 1727, 1805
NciI CCSGG 2 cut(s) 1514, 1515
NcoI CCATGG 2 cut(s) 1344, 1356
NdeII GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
NlaIV GGNNCC 2 cut(s) 687, 1341
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 4 cut(s) 166, 171, 1069, 1360
NsiI ATGCAT 1 cut(s) 538
OliI CACNNNNGTG 1 cut(s) 453
PagI TCATGA 4 cut(s) 223, 999, 1144, 1231
PctI GAATGC 2 cut(s) 250, 1721
PfeI GAWTC 3 cut(s) 5, 799, 1235
PkrI GCNGC 7 cut(s) 193, 289, 338, 433, 991, 1413, 1498
PleI GAGTC 3 cut(s) 208, 1066, 1067
PpsI GAGTC 3 cut(s) 208, 1066, 1067
Ppu21I YACGTR 1 cut(s) 476
Psp6I CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1445
PspGI CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1445
PspN4I GGNNCC 2 cut(s) 687, 1341
PspPI GGNCC 1 cut(s) 205
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 252
RsaI GTAC 1 cut(s) 881
RsaNI GTAC 1 cut(s) 880
RseI CAYNNNNRTG 3 cut(s) 351, 453, 998
SaqAI TTAA 5 cut(s) 27, 300, 575, 1779, 1863
SatI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1412, 1497
Sau3AI GATC 8 cut(s) 252, 396, 412, 583, 777, 817, 906, 1758
Sau96I GGNCC 1 cut(s) 205
SchI GAGTC 3 cut(s) 208, 1066, 1068
ScrFI CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1447, 1514, 1515
SduI GDGCHC 7 cut(s) 322, 571, 862, 1025, 1102, 1344, 1967
SfcI CTRYAG 1 cut(s) 649
SmaI CCCGGG 1 cut(s) 1515
SmiMI CAYNNNNRTG 3 cut(s) 351, 453, 998
SmlI CTYRAG 2 cut(s) 83, 574
SmoI CTYRAG 2 cut(s) 83, 574
SpeI ACTAGT 1 cut(s) 1462
SsiI CCGC 2 cut(s) 356, 1497
SspMI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1239, 1380, 1463, 1859
StyD4I CCNGG 9 cut(s) 207, 280, 379, 484, 563, 954, 1445, 1512, 1513
StyI CCWWGG 3 cut(s) 960, 1344, 1356
TaaI ACNGT 6 cut(s) 117, 627, 727, 914, 968, 1486
TaiI ACGT 2 cut(s) 173, 478
TaqI TCGA 5 cut(s) 399, 582, 814, 916, 1883
TauI GCSGC 1 cut(s) 1499
TfiI GAWTC 3 cut(s) 5, 799, 1235
Tru1I TTAA 5 cut(s) 27, 300, 575, 1779, 1863
Tru9I TTAA 5 cut(s) 27, 300, 575, 1779, 1863
TscAI CASTG 3 cut(s) 732, 1074, 1874
TseFI GTSAC 4 cut(s) 166, 171, 1069, 1360
TseI GCWGC 6 cut(s) 191, 287, 336, 431, 989, 1411
Tsp45I GTSAC 4 cut(s) 166, 171, 1069, 1360
TspGWI ACGGA 1 cut(s) 1040
TspMI CCCGGG 1 cut(s) 1513
TspRI CASTG 3 cut(s) 732, 1074, 1874
Vha464I CTTAAG 1 cut(s) 574
XapI RAATTY 4 cut(s) 78, 1326, 1387, 1948
XbaI TCTAGA 2 cut(s) 8, 970
XmaI CCCGGG 1 cut(s) 1513
XmiI GTMKAC 1 cut(s) 1352
XspI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1239, 1380, 1463, 1859
Zsp2I ATGCAT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.