FvH4_6g32100

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000496
Physical Location & Seq
Forward (+)
25203197 .. 25206989
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g32100.t2

Sequence Viewer

Length: 2142 bp
ATGGATTTCAGGATTTTAGAGGCAATTGAGAGGAAGGATATAGTCACATTTGCTAGCTTAGTCCGAGAAAATGAAGGAATTCTGGAGCAAAGAGAAGCTGATACTCTGAACACTCCATTACACCTTGTGTCAAAGTTTGGATACCTTGAAATGGCATCTGAAATTGTTTCTTTGTGCTCGGACATGGTTGCTGCTGAGAATAAGAACCAGGAGACTCCAGTCCATGAAGCTTGCCGAACAGGGAATCCCCGGATTTTGAAGATACTACTGGAAGCGAATCCTGAGGTAGTCAGTAACCTTAACAGTAAAGGGAAGATCAGCGCACTTTCTCTGGCTTGTAGCCATGGTCATCTTGATGTGGTGAAGCTCTTACTGAAAGAGCCTGGGAAGCTGGGTTTCGGGAAAGAAGGGTTTGATCAAACATGTATACACTTGGCCGTGTCTAATGGACACATAGATGTTGTTAGAGAGTTGCTAAGAGTGTGTCCTGACCTTGCTTATATGGTTGATGAGAAAGGAGACTATCCATTGCACTATGCAACTGGCAAAGGAAACCGGGAGATAACTTGGACACTCCTCAAGCTTGATCCAAAACTTGCTCAGAAGTACAATCTCAGTGGTCACACACCCTTGCACTCGGCAGCAATAAACTACAAAGTCTCAGTCCTTCAAGTGTTTGTCTCGATGGCTAAACCAGCTTTTCAGATTGTAACAAAAGCTGGAGAGACGGTGTTCCACTTGGCTGTGAAATATGGGCGATACGATGCTTTAGTATACTTGACATGTGTCTGTGATCATATGGATTACTTTGACTGTAGAGACCGTTATAGTAACACCATCCTACATCTTGCAGTTTCTGAAGCACAACATAAGATAGCGGAGTATCTGATCAGCAAAAAGAAAGTGGAGATAAATTCTCGAAACAATGATGGATTCACTGCCCTTGACCTCCTCAAACAGAAGAAGGACAGTGTAGACGATCAGCGCCTTGAAGCAATGCTATTGAAAGCAGGAGGTAAAACAAGGATTGAGCTGTTATCTACTTCACCAAAAGCAGATAAAGCCACTGTTCAGCCAGTAACACTTCTTGAGAACGTTTCGAAACGAGCTAAATTCCATGAAGAGTATGAGCTGCAGTTGTCCATCATAAATGAAATAGCTTCTGCTCCATCCAAGTCTCCATCAAGCTCATCAGCACCTATGTCCATGATGTCATCACCTTTTCCATCACCCCAGTCCAGCAAGTCTTCGCCTAAGCTTCCATCACCGCAATCCAGCAAGTCTTCGCCTAAGCTTCCATCACCGCAATCCAGCAAGTCATCACCTAAGCTACCATCACCACCATCTAGCAGGTCATCACCTCAGCTTCAGGTAGGGGAAGGCTCATCACGTCAGCTGCAAGTTGGATCAGCATTTGAAGTTGATCAGGGGCTCGATTATGAAGGACAAAAGAAGCAAGAGTTTCTTTTGCCAACCTTTGCAAGACAACACAAGCATCCTAGCAAATGGAACCAACTAGAAATGAGTACTGAGATTTTCTACAACCGGAGAAGGAAGCATGAAAAGGTGTACACTGAGGCACTACAGAATGCCAGGAACACCATAATACTAGTTGCCATTTTGATCGCAACGGTTACTTTTGCTGCTGGCATTAGTCCTCCAGGTGGTGTTTATCAGAATGGAGCTATGGAAGGGAAGTCAATAGCTGGCACCACAATTGCTTTCAAGGTGTTTGAAATAAGCAATTACATCGCACTCTTCACATCACTCTCGATAGTTGTTGTTCTTGTGAGTATCATTCCATACCGGAGAAAGCCATTGATGAGATTGTTGAGGTTTGCACACAAGGTGATGTGGGTAGCTGTGGCATTCATGGCAACAGGATATGTTGCAGCCACATGGGTTATCATGCCACAAAATCAGAAGAACGACTTGTTGTTTATAGTCTTTTTGACTATAAGCATTGGAATTCTGGGAACAGTTTTTATTTGGCTAGGTGTTATGCTAGTGGTTCATTGGCTGCGAAAGTCGAAGTGGAGGAAAGAAAGAAGAGAAATTGGGGAGGCTGATTTGGACCCTGATATGGAGAGCCGAAACTCAGACGTTGATAGCACCTACAATCAAGGATATCATTCATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

714

Amino Acids

79.5

Weight (kDa)

9.0

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 32 - 96 2.6e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 40 - 126 8.1e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 109 - 196 1.5e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 111 - 156 7.9e-06 Ankyrin repeats (many copies)
PGG PF13962 526 - 635 1.6e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1341
AccB1I GGYRCC 1 cut(s) 1709
AccI GTMKAC 3 cut(s) 427, 774, 975
AciI CCGC 3 cut(s) 878, 1268, 1304
AclI AACGTT 1 cut(s) 1095
AclWI GGATC 2 cut(s) 581, 1414
AcoI YGGCCR 1 cut(s) 435
AcsI RAATTY 4 cut(s) 78, 913, 1112, 1968
AcuI CTGAAG 2 cut(s) 879, 1352
AdeI CACNNNGTG 2 cut(s) 127, 1849
AfaI GTAC 3 cut(s) 608, 1528, 1571
AfiI CCNNNNNNNGG 3 cut(s) 151, 1664, 2083
AflIII ACRYGT 2 cut(s) 422, 782
AgsI TTSAA 8 cut(s) 149, 259, 671, 992, 1006, 1418, 1726, 1736
AhlI ACTAGT 1 cut(s) 1609
AjiI CACGTC 1 cut(s) 1391
AjnI CCWGG 4 cut(s) 207, 382, 1592, 1660
AloI GAACNNNNNNTCC 2 cut(s) 229, 261
Alw21I GWGCWC 1 cut(s) 179
Alw26I GTCTC 7 cut(s) 206, 513, 664, 685, 719, 813, 1182
AlwI GGATC 2 cut(s) 581, 1414
AlwNI CAGNNNCTG 1 cut(s) 857
AoxI GGCC 1 cut(s) 435
ApeKI GCWGC 7 cut(s) 191, 641, 1132, 1396, 1643, 1892, 2020
ApoI RAATTY 4 cut(s) 78, 913, 1112, 1968
ArsI GACNNNNNNTTYG 2 cut(s) 648, 680
Asp700I GAANNNNTTC 1 cut(s) 78
AspLEI GCGC 2 cut(s) 323, 987
AspS9I GGNCC 1 cut(s) 2074
AsuC2I CCSGG 2 cut(s) 250, 557
AsuII TTCGAA 1 cut(s) 1100
AsuNHI GCTAGC 1 cut(s) 53
AvaII GGWCC 1 cut(s) 2074
AxyI CCTNAGG 1 cut(s) 282
BanI GGYRCC 1 cut(s) 1709
BanII GRGCYC 1 cut(s) 1434
BbsI GAAGAC 2 cut(s) 1239, 1275
Bbv12I GWGCWC 1 cut(s) 179
BbvCI CCTCAGC 1 cut(s) 1362
BbvI GCAGC 7 cut(s) 178, 653, 1119, 1383, 1630, 1904, 2007
BceAI ACGGC 1 cut(s) 422
BcgI CGANNNNNNTGC 2 cut(s) 1732, 1766
BciT130I CCWGG 4 cut(s) 209, 384, 1594, 1662
BciVI GTATCC 1 cut(s) 134
BclI TGATCA 4 cut(s) 415, 793, 888, 1423
BcnI CCSGG 2 cut(s) 250, 557
BcoDI GTCTC 7 cut(s) 206, 513, 664, 685, 719, 813, 1182
BcuI ACTAGT 1 cut(s) 1609
BfaI CTAG 7 cut(s) 54, 1347, 1500, 1517, 1610, 1994, 2006
BfmI CTRYAG 3 cut(s) 814, 1133, 1583
BfoI RGCGCY 1 cut(s) 988
BfuAI ACCTGC 1 cut(s) 1341
BfuI GTATCC 1 cut(s) 134
BisI GCNGC 7 cut(s) 192, 642, 1133, 1397, 1644, 1893, 2021
BlsI GCNGC 7 cut(s) 193, 643, 1134, 1398, 1645, 1894, 2022
BmcAI AGTACT 1 cut(s) 1528
Bme1390I CCNGG 6 cut(s) 209, 250, 384, 557, 1594, 1662
Bme18I GGWCC 1 cut(s) 2074
BmgBI CACGTC 1 cut(s) 1391
BmgT120I GGNCC 1 cut(s) 2074
BmiI GGNNCC 3 cut(s) 1511, 1711, 2076
BmrFI CCNGG 6 cut(s) 209, 250, 384, 557, 1594, 1662
BmrI ACTGGG 1 cut(s) 1228
BmsI GCATC 3 cut(s) 164, 754, 1504
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 1228
BoxI GACNNNNGTC 2 cut(s) 218, 785
BpiI GAAGAC 2 cut(s) 1239, 1275
BpmI CTGGAG 4 cut(s) 104, 201, 741, 1644
Bpu10I CCTNAGC 4 cut(s) 1254, 1290, 1326, 1362
Bpu14I TTCGAA 1 cut(s) 1100
BpuEI CTTGAG 2 cut(s) 563, 1109
BpuMI CCSGG 2 cut(s) 250, 557
BsaI GGTCTC 1 cut(s) 813
BsaJI CCNNGG 3 cut(s) 248, 343, 383
BsaWI WCCGGW 2 cut(s) 1545, 1806
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 3 cut(s) 151, 1664, 2083
Bse1I ACTGG 5 cut(s) 218, 273, 547, 1076, 1234
Bse21I CCTNAGG 1 cut(s) 282
Bse3DI GCAATG 2 cut(s) 527, 1002
BseBI CCWGG 4 cut(s) 209, 384, 1594, 1662
BseDI CCNNGG 3 cut(s) 248, 343, 383
BseGI GGATG 3 cut(s) 837, 1169, 1495
BseLI CCNNNNNNNGG 3 cut(s) 151, 1664, 2083
BseMI GCAATG 2 cut(s) 527, 1002
BseMII CTCAG 9 cut(s) 186, 273, 614, 628, 675, 1376, 1521, 1566, 2112
BseNI ACTGG 5 cut(s) 218, 273, 547, 1076, 1234
BseRI GAGGAG 2 cut(s) 566, 941
BseXI GCAGC 7 cut(s) 178, 653, 1119, 1383, 1630, 1904, 2007
BseYI CCCAGC 1 cut(s) 391
BshFI GGCC 1 cut(s) 437
BshNI GGYRCC 1 cut(s) 1709
BsiHKAI GWGCWC 1 cut(s) 179
BsiSI CCGG 4 cut(s) 250, 556, 1546, 1807
BslI CCNNNNNNNGG 3 cut(s) 151, 1664, 2083
BsmAI GTCTC 7 cut(s) 206, 513, 664, 685, 719, 813, 1182
BsmBI CGTCTC 1 cut(s) 719
BsmI GAATGC 2 cut(s) 1594, 1868
BsnI GGCC 1 cut(s) 437
Bso31I GGTCTC 1 cut(s) 813
Bsp119I TTCGAA 1 cut(s) 1100
Bsp1286I GDGCHC 2 cut(s) 179, 1434
Bsp1407I TGTACA 1 cut(s) 1569
Bsp143I GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
Bsp19I CCATGG 1 cut(s) 343
BspACI CCGC 3 cut(s) 878, 1268, 1304
BspANI GGCC 1 cut(s) 437
BspCNI CTCAG 9 cut(s) 187, 274, 613, 627, 674, 1375, 1522, 1567, 2111
BspLI GGNNCC 3 cut(s) 1511, 1711, 2076
BspMAI CTGCAG 1 cut(s) 1137
BspMI ACCTGC 1 cut(s) 1341
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 2 cut(s) 581, 1414
BspT104I TTCGAA 1 cut(s) 1100
BspT107I GGYRCC 1 cut(s) 1709
BspTNI GGTCTC 1 cut(s) 813
BsrDI GCAATG 2 cut(s) 527, 1002
BsrGI TGTACA 1 cut(s) 1569
BsrI ACTGG 5 cut(s) 218, 273, 547, 1076, 1234
BssECI CCNNGG 3 cut(s) 248, 343, 383
BssMI GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
BssNAI GTATAC 2 cut(s) 428, 775
BssT1I CCWWGG 1 cut(s) 343
Bst1107I GTATAC 2 cut(s) 428, 775
Bst2UI CCWGG 4 cut(s) 209, 384, 1594, 1662
Bst4CI ACNGT 8 cut(s) 305, 730, 815, 824, 971, 1069, 1633, 1981
Bst6I CTCTTC 3 cut(s) 1116, 1763, 2044
BstAUI TGTACA 1 cut(s) 1569
BstBI TTCGAA 1 cut(s) 1100
BstC8I GCNNGC 4 cut(s) 55, 232, 1648, 1708
BstDSI CCRYGG 1 cut(s) 343
BstF5I GGATG 3 cut(s) 837, 1169, 1495
BstH2I RGCGCY 1 cut(s) 988
BstHHI GCGC 2 cut(s) 323, 987
BstKTI GATC 9 cut(s) 318, 418, 589, 796, 891, 982, 1409, 1426, 1626
BstMAI GTCTC 7 cut(s) 206, 513, 664, 685, 719, 813, 1182
BstMBI GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
BstMWI GCNNNNNNNGC 4 cut(s) 388, 695, 1061, 1874
BstNI CCWGG 4 cut(s) 209, 384, 1594, 1662
BstNSI RCATGY 2 cut(s) 426, 786
BstPAI GACNNNNGTC 2 cut(s) 218, 785
BstSCI CCNGG 6 cut(s) 207, 248, 382, 555, 1592, 1660
BstSFI CTRYAG 3 cut(s) 814, 1133, 1583
BstV1I GCAGC 7 cut(s) 178, 653, 1119, 1383, 1630, 1904, 2007
BstV2I GAAGAC 2 cut(s) 1239, 1275
BstZ17I GTATAC 2 cut(s) 428, 775
Bsu36I CCTNAGG 1 cut(s) 282
BsuI GTATCC 1 cut(s) 134
BsuRI GGCC 1 cut(s) 437
BtgI CCRYGG 1 cut(s) 343
BtgZI GCGATG 1 cut(s) 1735
BtrI CACGTC 1 cut(s) 1391
BtsCI GGATG 3 cut(s) 837, 1169, 1495
BtsI GCAGTG 1 cut(s) 936
BtsIMutI CAGTG 5 cut(s) 622, 936, 976, 1065, 1572
BveI ACCTGC 1 cut(s) 1341
Cac8I GCNNGC 4 cut(s) 55, 232, 1648, 1708
CaiI CAGNNNCTG 1 cut(s) 857
CfoI GCGC 2 cut(s) 323, 987
Cfr13I GGNCC 1 cut(s) 2074
Csp6I GTAC 3 cut(s) 607, 1527, 1570
CspCI CAANNNNNGTGG 2 cut(s) 598, 633
CviQI GTAC 3 cut(s) 607, 1527, 1570
DpnI GATC 9 cut(s) 317, 417, 588, 795, 890, 981, 1408, 1425, 1625
DpnII GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
DraIII CACNNNGTG 2 cut(s) 127, 1849
EaeI YGGCCR 1 cut(s) 435
Eam1104I CTCTTC 3 cut(s) 1116, 1763, 2044
EarI CTCTTC 3 cut(s) 1116, 1763, 2044
Eco130I CCWWGG 1 cut(s) 343
Eco24I GRGCYC 1 cut(s) 1434
Eco31I GGTCTC 1 cut(s) 813
Eco32I GATATC 1 cut(s) 2129
Eco47I GGWCC 1 cut(s) 2074
Eco57I CTGAAG 2 cut(s) 879, 1352
Eco81I CCTNAGG 1 cut(s) 282
EcoRI GAATTC 2 cut(s) 78, 1968
EcoRII CCWGG 4 cut(s) 207, 382, 1592, 1660
EcoRV GATATC 1 cut(s) 2129
EcoT14I CCWWGG 1 cut(s) 343
EcoT38I GRGCYC 1 cut(s) 1434
ErhI CCWWGG 1 cut(s) 343
Esp3I CGTCTC 1 cut(s) 719
FalI AAGNNNNNCTT 4 cut(s) 1449, 1481, 1916, 1948
FauNDI CATATG 1 cut(s) 798
FbaI TGATCA 4 cut(s) 415, 793, 888, 1423
FblI GTMKAC 3 cut(s) 427, 774, 975
Fnu4HI GCNGC 7 cut(s) 192, 642, 1133, 1397, 1644, 1893, 2021
FokI GGATG 3 cut(s) 824, 1156, 1482
FriOI GRGCYC 1 cut(s) 1434
Fsp4HI GCNGC 7 cut(s) 192, 642, 1133, 1397, 1644, 1893, 2021
FspBI CTAG 7 cut(s) 54, 1347, 1500, 1517, 1610, 1994, 2006
GlaI GCGC 2 cut(s) 322, 986
GluI GCNGC 7 cut(s) 192, 642, 1133, 1397, 1644, 1893, 2021
GsaI CCCAGC 1 cut(s) 395
GsuI CTGGAG 4 cut(s) 104, 201, 741, 1644
HaeII RGCGCY 1 cut(s) 988
HaeIII GGCC 1 cut(s) 437
HapII CCGG 4 cut(s) 250, 556, 1546, 1807
HhaI GCGC 2 cut(s) 323, 987
Hin6I GCGC 2 cut(s) 321, 985
HinP1I GCGC 2 cut(s) 321, 985
HindIII AAGCTT 4 cut(s) 228, 581, 1256, 1292
HinfI GANTC 4 cut(s) 214, 244, 277, 933
HpaII CCGG 4 cut(s) 250, 556, 1546, 1807
Hpy166II GTNNAC 5 cut(s) 428, 775, 976, 1570, 1572
Hpy8I GTNNAC 5 cut(s) 428, 775, 976, 1570, 1572
HpyAV CCTTC 9 cut(s) 28, 68, 401, 677, 958, 1373, 1436, 1545, 1685
HpyCH4III ACNGT 8 cut(s) 305, 730, 815, 824, 971, 1069, 1633, 1981
HpyCH4IV ACGT 3 cut(s) 1095, 1390, 2103
HpyCH4V TGCA 9 cut(s) 532, 539, 634, 851, 1135, 1399, 1481, 1841, 1892
HpyF10VI GCNNNNNNNGC 4 cut(s) 388, 695, 1061, 1874
HpySE526I ACGT 3 cut(s) 1095, 1390, 2103
HspAI GCGC 2 cut(s) 321, 985
Ksp22I TGATCA 4 cut(s) 415, 793, 888, 1423
Kzo9I GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
LmnI GCTCC 3 cut(s) 85, 1171, 1682
Lsp1109I GCAGC 7 cut(s) 178, 653, 1119, 1383, 1630, 1904, 2007
LweI GCATC 3 cut(s) 164, 754, 1504
MaeI CTAG 7 cut(s) 54, 1347, 1500, 1517, 1610, 1994, 2006
MaeII ACGT 3 cut(s) 1095, 1390, 2103
MaeIII GTNAC 7 cut(s) 43, 293, 620, 709, 830, 1078, 1633
MalI GATC 9 cut(s) 317, 417, 588, 795, 890, 981, 1408, 1425, 1625
MboI GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
MboII GAAGA 9 cut(s) 271, 325, 973, 1133, 1239, 1275, 1750, 1936, 2061
MfeI CAATTG 2 cut(s) 24, 1716
MhlI GDGCHC 2 cut(s) 179, 1434
MluCI AATT 9 cut(s) 24, 78, 162, 913, 1112, 1716, 1744, 1968, 2055
MlyI GAGTC 1 cut(s) 208
MmeI TCCRAC 1 cut(s) 1384
MroXI GAANNNNTTC 1 cut(s) 78
MseI TTAA 2 cut(s) 300, 2140
MslI CAYNNNNRTG 2 cut(s) 354, 456
MspA1I CMGCKG 1 cut(s) 1396
MspI CCGG 4 cut(s) 250, 556, 1546, 1807
MspR9I CCNGG 6 cut(s) 209, 250, 384, 557, 1594, 1662
MunI CAATTG 2 cut(s) 24, 1716
Mva1269I GAATGC 2 cut(s) 1594, 1868
MvaI CCWGG 4 cut(s) 209, 384, 1594, 1662
MwoI GCNNNNNNNGC 4 cut(s) 388, 695, 1061, 1874
NciI CCSGG 2 cut(s) 250, 557
NcoI CCATGG 1 cut(s) 343
NdeI CATATG 1 cut(s) 798
NdeII GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
NheI GCTAGC 1 cut(s) 53
NlaIV GGNNCC 3 cut(s) 1511, 1711, 2076
NmeAIII GCCGAG 1 cut(s) 617
NmuCI GTSAC 2 cut(s) 43, 620
NspI RCATGY 2 cut(s) 426, 786
NspV TTCGAA 1 cut(s) 1100
PciI ACATGT 2 cut(s) 422, 782
PctI GAATGC 2 cut(s) 1594, 1868
PdmI GAANNNNTTC 1 cut(s) 78
PfeI GAWTC 3 cut(s) 244, 277, 933
PkrI GCNGC 7 cut(s) 193, 643, 1134, 1398, 1645, 1894, 2022
PleI GAGTC 1 cut(s) 208
PpsI GAGTC 1 cut(s) 208
PscI ACATGT 2 cut(s) 422, 782
PshAI GACNNNNGTC 2 cut(s) 218, 785
Psp1406I AACGTT 1 cut(s) 1095
Psp6I CCWGG 4 cut(s) 207, 382, 1592, 1660
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 4 cut(s) 207, 382, 1592, 1660
PspN4I GGNNCC 3 cut(s) 1511, 1711, 2076
PspPI GGNCC 1 cut(s) 2074
PstI CTGCAG 1 cut(s) 1137
PstNI CAGNNNCTG 1 cut(s) 857
PvuII CAGCTG 1 cut(s) 1396
RsaI GTAC 3 cut(s) 608, 1528, 1571
RsaNI GTAC 3 cut(s) 607, 1527, 1570
RseI CAYNNNNRTG 2 cut(s) 354, 456
SaqAI TTAA 2 cut(s) 300, 2140
SatI GCNGC 7 cut(s) 192, 642, 1133, 1397, 1644, 1893, 2021
Sau3AI GATC 9 cut(s) 315, 415, 586, 793, 888, 979, 1406, 1423, 1623
Sau96I GGNCC 1 cut(s) 2074
ScaI AGTACT 1 cut(s) 1528
SchI GAGTC 1 cut(s) 208
ScrFI CCNGG 6 cut(s) 209, 250, 384, 557, 1594, 1662
SduI GDGCHC 2 cut(s) 179, 1434
SfaNI GCATC 3 cut(s) 164, 754, 1504
SfcI CTRYAG 3 cut(s) 814, 1133, 1583
SfuI TTCGAA 1 cut(s) 1100
SinI GGWCC 1 cut(s) 2074
SmiMI CAYNNNNRTG 2 cut(s) 354, 456
SmlI CTYRAG 2 cut(s) 578, 1088
SmoI CTYRAG 2 cut(s) 578, 1088
SpeI ACTAGT 1 cut(s) 1609
Sse9I AATT 9 cut(s) 24, 78, 162, 913, 1112, 1716, 1744, 1968, 2055
SsiI CCGC 3 cut(s) 878, 1268, 1304
SspMI CTAG 7 cut(s) 54, 1347, 1500, 1517, 1610, 1994, 2006
StyD4I CCNGG 6 cut(s) 207, 248, 382, 555, 1592, 1660
StyI CCWWGG 1 cut(s) 343
TaaI ACNGT 8 cut(s) 305, 730, 815, 824, 971, 1069, 1633, 1981
TaiI ACGT 3 cut(s) 1098, 1393, 2106
TaqI TCGA 6 cut(s) 683, 919, 1100, 1434, 1772, 2030
TasI AATT 9 cut(s) 24, 78, 162, 913, 1112, 1716, 1744, 1968, 2055
TatI WGTACW 3 cut(s) 606, 1526, 1569
TfiI GAWTC 3 cut(s) 244, 277, 933
Tru1I TTAA 2 cut(s) 300, 2140
Tru9I TTAA 2 cut(s) 300, 2140
TscAI CASTG 5 cut(s) 622, 943, 976, 1072, 1579
TseFI GTSAC 2 cut(s) 43, 620
TseI GCWGC 7 cut(s) 191, 641, 1132, 1396, 1643, 1892, 2020
Tsp45I GTSAC 2 cut(s) 43, 620
TspDTI ATGAA 9 cut(s) 87, 240, 1134, 1167, 1455, 1575, 1861, 2003, 2124
TspRI CASTG 5 cut(s) 622, 943, 976, 1072, 1579
VpaK11BI GGWCC 1 cut(s) 2074
XapI RAATTY 4 cut(s) 78, 913, 1112, 1968
XceI RCATGY 2 cut(s) 426, 786
XmiI GTMKAC 3 cut(s) 427, 774, 975
XmnI GAANNNNTTC 1 cut(s) 78
XspI CTAG 7 cut(s) 54, 1347, 1500, 1517, 1610, 1994, 2006
ZrmI AGTACT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.