Rh2CG396000

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000496
Physical Location & Seq
Forward (+)
53820877 .. 53823584
2708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG396000.1

Sequence Viewer

Length: 2106 bp
ATGGATTTCAGGATTGTAGAGGCAATTGAGAGAAAGGACACAGTCACATTTGCTAGCTTAGTCCGAGAAAATGAAGGAATTCTCGAGCAAAGAGAAGCCGATACTTGCAACACGCCATTACACCTTGTGTCAAAGTTTGGATACCTTGAAATGGTGTCTGAAATTGTTTCTTTGTGCCCGGACATGGTTGCTGCTGAGAATAAGAACCAGGAGACTCCAGTCCATGAAGCTTGTCGAACAGGGAATCCCCGGATTTTAAAGACACTGCTGGAAGCGAATCCTGAGGTAGTTAGTAAGCTTAACAGTAAAGAAAAGATCAGTGCACTGTCTCTGGCATGTAGCTATGGTCATCTTGATGTGGTGAGGCTCTTACTGAAAGAGCCTGGGAAGCTAGGTTTGGGGAAAGAAGGGTTTGATCAAACATGTATACACTTGGCTGTCTCTGGTGGACACATGGATGTTGTTAAAGAGTTGCTAAGAGTGTGTCCTGACCTTGCTTATATGGTTGATGAGAAAGGAAACTATCCATTGCACTATGCAACTAGCAAAGAGAACAGGGAGATAACCTGGGCACTCCTCAAGCTTGATCCAAAGCTTGCTCAGCAGCACAATCTCAGTGGTCACACGCCCTTGCACTTGGCAGCAATAAACTACAAAGTCTCAGTCCTTCTAGTGTTCGTCTCAATGGCAAAACCAGCTTTTCAGATCGTAACAAAAGCCGGCGAGACGGTATTCCACTTGGTTGTAAAATATGGGCGATATGATGCCTTAGTATACTTGACCCATGTCTGTGATGATATGGATTTCTTTGACTGTAGAGACCGTTATAATAACACCATCCTACATCTTGCAGTTTCTGAAGCACAACATAAGATAGCAGAGTATCTAATCAACAAAAAGAAAGTGGAGCTCAATTCTCGAAACAATGAAGGACTCACAGCCCTTGACCTCCTCAAACAGAGCAAGGAAAGTGTAGACAATCAGCGTCTTGAAGACATGCTAATGAAAGCAGGAGGTAAAACAAGGATTGATCTGTTATCTACTTCACCAAAAGAAGATAAAGCCACTACTCAGCCAGTGACACTTCCTGAAAACATACCGAAACGAGCACAATTCGTTAAAGAGTATGAACTGCAGTTGTCCATCATAAATGAGATGGCTTCTGCTGCATCCAAGTCCCCATCAAGCTCATCAGCACCTATGTCCAGGATGTCATCACCTTTTCCATCACCCCAATCCAGCAAGTCTTCGCCCAGGCTACCATCACCGCAATCTAGCAAGTCATCACCTAAGCTGCCATCACCGCCATCTAGCAAGTCATCGCCTCAGCCTCAGGTTGGGGAAGGCTTATCACCTCAGCAGCAAGTTGGATCAGCATTTGAAGTTAAGGAGGGACTGGATTATGAAAGACAAAAGAAGCAAGAGTTTCTTCTGCAAACCTTTGCCAGACAACAAAAGCATCCTAGAAAATGGAACCAATCAGAAATGAGTACGGAGATTTTCTACAACCGGCGCAGGAAGCATGAAAAGGTGTACGCAGAGGCACTACAGAATGCCAGGAACACCATAACACTAGTTGCCATTTTGATCGCCACGGTTACTTTTGCTGCTGGCATTAGTCCCCCGGGTGGTGTTTATCAGGAGGGACTTATGAAAGGGAAGTCGATAGCAGGAACAACAACTGCTTTCAAGGTGTTTGAAATAAGCAATTACGTCGCACTATTCACATCACTCTCGATAGTTGTTGTTCTTGTGAGTATCATTCCATATCGGAGAAAGCCATTGATAAGATTGTTGAGGGTTGCTCATAAGGTAATGTGGGTAGCTGTGGCATTCATGGCAACAGGGTATGTTGCAGCCACATGGGTTATCATGCAACAAAATCAGAAAAACAAATTGTTGTTTGTAGCCTTTTTGACTATAAGCATTGGAATTCTGGGAACAGTTTTCATTTGGCTGGGTGTTATGCTAGTTGTTCATTGCCTGCGAAAGTCGAAGTGGAGGAAGGGAAGAAGAGAGATTGGGGAGGCTGATGAGGATCCTGAAATGGGAAGCCAAAACTCGGATGTTGATAGCACATACAATCAAGGATATCATTCATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

701

Amino Acids

78.33

Weight (kDa)

9.03

Isoelectric Point (pI)

45.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 32 - 96 1.2e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 101 - 159 1.9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 109 - 196 8.8e-13 Ankyrin repeats (3 copies)
Ank_2 PF12796 235 - 307 5.8e-07 Ankyrin repeats (3 copies)
PGG PF13962 514 - 623 1.2e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
AccI GTMKAC 3 cut(s) 427, 774, 975
AciI CCGC 2 cut(s) 1268, 1304
AclWI GGATC 4 cut(s) 581, 1378, 2033, 2046
AcsI RAATTY 2 cut(s) 78, 1932
AcuI CTGAAG 1 cut(s) 879
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 2 cut(s) 1492, 1535
AfiI CCNNNNNNNGG 6 cut(s) 151, 184, 1337, 1628, 2048, 2062
AflIII ACRYGT 1 cut(s) 422
AgsI TTSAA 5 cut(s) 149, 992, 1382, 1690, 1700
AhlI ACTAGT 1 cut(s) 1573
AjnI CCWGG 6 cut(s) 207, 382, 566, 1205, 1253, 1556
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AloI GAACNNNNNNTCC 2 cut(s) 229, 261
Alw21I GWGCWC 3 cut(s) 325, 912, 1111
Alw26I GTCTC 7 cut(s) 206, 333, 445, 664, 685, 719, 813
Alw44I GTGCAC 1 cut(s) 321
AlwI GGATC 4 cut(s) 581, 1378, 2033, 2046
AlwNI CAGNNNCTG 1 cut(s) 857
Ama87I CYCGRG 2 cut(s) 83, 1624
ApaLI GTGCAC 1 cut(s) 321
ApeKI GCWGC 8 cut(s) 191, 604, 641, 1166, 1294, 1360, 1607, 1856
ApoI RAATTY 2 cut(s) 78, 1932
ArsI GACNNNNNNTTYG 2 cut(s) 648, 680
Asp700I GAANNNNTTC 1 cut(s) 78
AspLEI GCGC 1 cut(s) 1515
AsuC2I CCSGG 4 cut(s) 179, 250, 1625, 1626
AsuHPI GGTGA 8 cut(s) 373, 1038, 1209, 1221, 1257, 1278, 1293, 1344
AsuNHI GCTAGC 1 cut(s) 53
AvaI CYCGRG 2 cut(s) 83, 1624
AxyI CCTNAGG 2 cut(s) 282, 1332
BaeGI GKGCMC 3 cut(s) 179, 325, 574
BamHI GGATCC 1 cut(s) 2038
BanII GRGCYC 1 cut(s) 912
BbsI GAAGAC 2 cut(s) 999, 1239
Bbv12I GWGCWC 3 cut(s) 325, 912, 1111
BbvCI CCTCAGC 2 cut(s) 1326, 1356
BbvI GCAGC 8 cut(s) 178, 616, 653, 1153, 1281, 1372, 1594, 1868
BccI CCATC 8 cut(s) 845, 1150, 1151, 1189, 1234, 1270, 1306, 1315
BcgI CGANNNNNNTGC 2 cut(s) 1696, 1730
BciT130I CCWGG 6 cut(s) 209, 384, 568, 1207, 1255, 1558
BciVI GTATCC 1 cut(s) 134
BclI TGATCA 1 cut(s) 415
BcnI CCSGG 4 cut(s) 179, 250, 1625, 1626
BcoDI GTCTC 7 cut(s) 206, 333, 445, 664, 685, 719, 813
BcuI ACTAGT 1 cut(s) 1573
BfaI CTAG 9 cut(s) 54, 392, 543, 671, 1275, 1311, 1464, 1574, 1970
BfmI CTRYAG 3 cut(s) 814, 1133, 1547
BfuI GTATCC 1 cut(s) 134
BisI GCNGC 8 cut(s) 192, 605, 642, 1167, 1295, 1361, 1608, 1857
BlpI GCTNAGC 1 cut(s) 600
BlsI GCNGC 8 cut(s) 193, 606, 643, 1168, 1296, 1362, 1609, 1858
BmeT110I CYCGRG 2 cut(s) 83, 1624
BmiI GGNNCC 2 cut(s) 1475, 2040
BmsI GCATC 3 cut(s) 754, 1178, 1468
BmtI GCTAGC 1 cut(s) 57
BoxI GACNNNNGTC 2 cut(s) 218, 785
BpiI GAAGAC 2 cut(s) 999, 1239
BplI GAGNNNNNCTC 2 cut(s) 1789, 1821
BpmI CTGGAG 1 cut(s) 201
Bpu10I CCTNAGC 3 cut(s) 1290, 1326, 1356
Bpu1102I GCTNAGC 1 cut(s) 600
BpuEI CTTGAG 1 cut(s) 563
BpuMI CCSGG 4 cut(s) 179, 250, 1625, 1626
BsaBI GATNNNNATC 1 cut(s) 2037
BsaI GGTCTC 1 cut(s) 813
BsaJI CCNNGG 7 cut(s) 248, 383, 567, 1253, 1593, 1623, 1624
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 184, 1337, 1628, 2048, 2062
Bse118I RCCGGY 2 cut(s) 719, 1509
Bse1I ACTGG 3 cut(s) 218, 1076, 1401
Bse21I CCTNAGG 2 cut(s) 282, 1332
Bse3DI GCAATG 2 cut(s) 527, 1978
Bse8I GATNNNNATC 1 cut(s) 2037
BseBI CCWGG 6 cut(s) 209, 384, 568, 1207, 1255, 1558
BseDI CCNNGG 7 cut(s) 248, 383, 567, 1253, 1593, 1623, 1624
BseGI GGATG 6 cut(s) 463, 837, 1169, 1215, 1459, 2071
BseJI GATNNNNATC 1 cut(s) 2037
BseLI CCNNNNNNNGG 6 cut(s) 151, 184, 1337, 1628, 2048, 2062
BseMI GCAATG 2 cut(s) 527, 1978
BseMII CTCAG 9 cut(s) 186, 273, 614, 628, 675, 1085, 1340, 1346, 1370
BseNI ACTGG 3 cut(s) 218, 1076, 1401
BseRI GAGGAG 2 cut(s) 566, 941
BseSI GKGCMC 3 cut(s) 179, 325, 574
BseXI GCAGC 8 cut(s) 178, 616, 653, 1153, 1281, 1372, 1594, 1868
BseYI CCCAGC 1 cut(s) 1957
BsiHKAI GWGCWC 3 cut(s) 325, 912, 1111
BsiHKCI CYCGRG 2 cut(s) 83, 1624
BsiSI CCGG 5 cut(s) 179, 250, 720, 1510, 1625
BslFI GGGAC 4 cut(s) 1162, 1407, 1605, 1659
BslI CCNNNNNNNGG 6 cut(s) 151, 184, 1337, 1628, 2048, 2062
BsmAI GTCTC 7 cut(s) 206, 333, 445, 664, 685, 719, 813
BsmBI CGTCTC 2 cut(s) 685, 719
BsmFI GGGAC 4 cut(s) 1162, 1407, 1605, 1659
BsmI GAATGC 2 cut(s) 1558, 1832
Bso31I GGTCTC 1 cut(s) 813
BsoBI CYCGRG 2 cut(s) 83, 1624
Bsp1286I GDGCHC 5 cut(s) 179, 325, 574, 912, 1111
Bsp143I GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
Bsp1720I GCTNAGC 1 cut(s) 600
BspACI CCGC 2 cut(s) 1268, 1304
BspCNI CTCAG 9 cut(s) 187, 274, 613, 627, 674, 1084, 1339, 1345, 1369
BspLI GGNNCC 2 cut(s) 1475, 2040
BspMAI CTGCAG 1 cut(s) 1137
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 4 cut(s) 581, 1378, 2033, 2046
BspTNI GGTCTC 1 cut(s) 813
BsrDI GCAATG 2 cut(s) 527, 1978
BsrFI RCCGGY 2 cut(s) 719, 1509
BsrI ACTGG 3 cut(s) 218, 1076, 1401
BssAI RCCGGY 2 cut(s) 719, 1509
BssECI CCNNGG 7 cut(s) 248, 383, 567, 1253, 1593, 1623, 1624
BssMI GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
BssNAI GTATAC 2 cut(s) 428, 775
Bst1107I GTATAC 2 cut(s) 428, 775
Bst2UI CCWGG 6 cut(s) 209, 384, 568, 1207, 1255, 1558
Bst4CI ACNGT 8 cut(s) 43, 305, 327, 730, 815, 824, 1597, 1945
Bst6I CTCTTC 1 cut(s) 2008
BstC8I GCNNGC 5 cut(s) 55, 597, 721, 1612, 1985
BstDSI CCRYGG 1 cut(s) 1593
BstF5I GGATG 6 cut(s) 463, 837, 1169, 1215, 1459, 2071
BstHHI GCGC 1 cut(s) 1515
BstKTI GATC 8 cut(s) 318, 418, 589, 708, 1033, 1373, 1590, 2041
BstMAI GTCTC 7 cut(s) 206, 333, 445, 664, 685, 719, 813
BstMBI GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
BstMWI GCNNNNNNNGC 7 cut(s) 388, 601, 695, 1166, 1303, 1519, 1838
BstNI CCWGG 6 cut(s) 209, 384, 568, 1207, 1255, 1558
BstNSI RCATGY 3 cut(s) 339, 426, 1000
BstPAI GACNNNNGTC 2 cut(s) 218, 785
BstSFI CTRYAG 3 cut(s) 814, 1133, 1547
BstSLI GKGCMC 3 cut(s) 179, 325, 574
BstV1I GCAGC 8 cut(s) 178, 616, 653, 1153, 1281, 1372, 1594, 1868
BstV2I GAAGAC 2 cut(s) 999, 1239
BstX2I RGATCY 1 cut(s) 2038
BstYI RGATCY 1 cut(s) 2038
BstZ17I GTATAC 2 cut(s) 428, 775
Bsu36I CCTNAGG 2 cut(s) 282, 1332
BsuI GTATCC 1 cut(s) 134
BtgI CCRYGG 1 cut(s) 1593
BtgZI GCGATG 1 cut(s) 1305
BtsCI GGATG 6 cut(s) 463, 837, 1169, 1215, 1459, 2071
BtsI GCAGTG 1 cut(s) 263
BtsIMutI CAGTG 5 cut(s) 263, 323, 325, 622, 1083
Cac8I GCNNGC 5 cut(s) 55, 597, 721, 1612, 1985
CaiI CAGNNNCTG 1 cut(s) 857
CfoI GCGC 1 cut(s) 1515
Cfr10I RCCGGY 2 cut(s) 719, 1509
Cfr9I CCCGGG 1 cut(s) 1624
CseI GACGC 1 cut(s) 974
Csp6I GTAC 2 cut(s) 1491, 1534
CspCI CAANNNNNGTGG 2 cut(s) 598, 633
CviQI GTAC 2 cut(s) 1491, 1534
DpnI GATC 8 cut(s) 317, 417, 588, 707, 1032, 1372, 1589, 2040
DpnII GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
DraI TTTAAA 1 cut(s) 258
DraIII CACNNNGTG 1 cut(s) 127
Eam1104I CTCTTC 1 cut(s) 2008
EarI CTCTTC 1 cut(s) 2008
Ecl136II GAGCTC 1 cut(s) 910
Eco24I GRGCYC 1 cut(s) 912
Eco31I GGTCTC 1 cut(s) 813
Eco32I GATATC 1 cut(s) 2093
Eco53kI GAGCTC 1 cut(s) 910
Eco57I CTGAAG 1 cut(s) 879
Eco81I CCTNAGG 2 cut(s) 282, 1332
Eco88I CYCGRG 2 cut(s) 83, 1624
EcoICRI GAGCTC 1 cut(s) 910
EcoRI GAATTC 2 cut(s) 78, 1932
EcoRII CCWGG 6 cut(s) 207, 382, 566, 1205, 1253, 1556
EcoRV GATATC 1 cut(s) 2093
EcoT38I GRGCYC 1 cut(s) 912
Esp3I CGTCTC 2 cut(s) 685, 719
FalI AAGNNNNNCTT 2 cut(s) 1413, 1445
FaqI GGGAC 4 cut(s) 1162, 1407, 1605, 1659
FbaI TGATCA 1 cut(s) 415
FblI GTMKAC 3 cut(s) 427, 774, 975
Fnu4HI GCNGC 8 cut(s) 192, 605, 642, 1167, 1295, 1361, 1608, 1857
FokI GGATG 6 cut(s) 470, 824, 1156, 1222, 1446, 2078
FriOI GRGCYC 1 cut(s) 912
Fsp4HI GCNGC 8 cut(s) 192, 605, 642, 1167, 1295, 1361, 1608, 1857
FspBI CTAG 9 cut(s) 54, 392, 543, 671, 1275, 1311, 1464, 1574, 1970
GlaI GCGC 1 cut(s) 1514
GluI GCNGC 8 cut(s) 192, 605, 642, 1167, 1295, 1361, 1608, 1857
GsaI CCCAGC 1 cut(s) 1961
GsuI CTGGAG 1 cut(s) 201
HapII CCGG 5 cut(s) 179, 250, 720, 1510, 1625
HgaI GACGC 1 cut(s) 974
HhaI GCGC 1 cut(s) 1515
Hin6I GCGC 1 cut(s) 1513
HinP1I GCGC 1 cut(s) 1513
HindIII AAGCTT 4 cut(s) 228, 296, 581, 593
HinfI GANTC 4 cut(s) 214, 244, 277, 933
HpaII CCGG 5 cut(s) 179, 250, 720, 1510, 1625
HphI GGTGA 8 cut(s) 373, 1038, 1209, 1221, 1257, 1278, 1293, 1344
Hpy166II GTNNAC 6 cut(s) 323, 428, 449, 775, 976, 1534
Hpy188I TCNGA 8 cut(s) 65, 160, 705, 859, 1483, 1773, 1887, 2065
Hpy8I GTNNAC 6 cut(s) 323, 428, 449, 775, 976, 1534
Hpy99I CGWCG 1 cut(s) 1718
HpyAV CCTTC 6 cut(s) 68, 401, 677, 923, 1337, 1999
HpyCH4III ACNGT 8 cut(s) 43, 305, 327, 730, 815, 824, 1597, 1945
HpyCH4IV ACGT 1 cut(s) 1713
HpyF10VI GCNNNNNNNGC 7 cut(s) 388, 601, 695, 1166, 1303, 1519, 1838
HpySE526I ACGT 1 cut(s) 1713
HspAI GCGC 1 cut(s) 1513
KroI GCCGGC 1 cut(s) 719
KroNI GCCGGC 1 cut(s) 721
Ksp22I TGATCA 1 cut(s) 415
Kzo9I GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
LmnI GCTCC 1 cut(s) 907
Lsp1109I GCAGC 8 cut(s) 178, 616, 653, 1153, 1281, 1372, 1594, 1868
LweI GCATC 3 cut(s) 754, 1178, 1468
MaeI CTAG 9 cut(s) 54, 392, 543, 671, 1275, 1311, 1464, 1574, 1970
MaeII ACGT 1 cut(s) 1713
MaeIII GTNAC 5 cut(s) 43, 620, 709, 1078, 1597
MalI GATC 8 cut(s) 317, 417, 588, 707, 1032, 1372, 1589, 2040
MboI GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
MboII GAAGA 6 cut(s) 1004, 1067, 1239, 1421, 2022, 2025
MfeI CAATTG 1 cut(s) 24
MflI RGATCY 1 cut(s) 2038
MhlI GDGCHC 5 cut(s) 179, 325, 574, 912, 1111
MluCI AATT 8 cut(s) 24, 78, 162, 913, 1112, 1708, 1895, 1932
MlyI GAGTC 2 cut(s) 208, 927
MmeI TCCRAC 1 cut(s) 1348
MroNI GCCGGC 1 cut(s) 719
MroXI GAANNNNTTC 1 cut(s) 78
MseI TTAA 5 cut(s) 257, 300, 465, 1119, 1386
MslI CAYNNNNRTG 4 cut(s) 354, 456, 789, 1001
MspI CCGG 5 cut(s) 179, 250, 720, 1510, 1625
MunI CAATTG 1 cut(s) 24
Mva1269I GAATGC 2 cut(s) 1558, 1832
MvaI CCWGG 6 cut(s) 209, 384, 568, 1207, 1255, 1558
MwoI GCNNNNNNNGC 7 cut(s) 388, 601, 695, 1166, 1303, 1519, 1838
NaeI GCCGGC 1 cut(s) 721
NciI CCSGG 4 cut(s) 179, 250, 1625, 1626
NdeII GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
NgoMIV GCCGGC 1 cut(s) 719
NheI GCTAGC 1 cut(s) 53
NlaIV GGNNCC 2 cut(s) 1475, 2040
NmuCI GTSAC 3 cut(s) 43, 620, 1078
NspI RCATGY 3 cut(s) 339, 426, 1000
PaeR7I CTCGAG 1 cut(s) 83
PciI ACATGT 1 cut(s) 422
PctI GAATGC 2 cut(s) 1558, 1832
PdiI GCCGGC 1 cut(s) 721
PdmI GAANNNNTTC 1 cut(s) 78
PfeI GAWTC 2 cut(s) 244, 277
PflFI GACNNNGTC 1 cut(s) 41
PfoI TCCNGGA 1 cut(s) 1205
PkrI GCNGC 8 cut(s) 193, 606, 643, 1168, 1296, 1362, 1609, 1858
PleI GAGTC 2 cut(s) 208, 927
PpsI GAGTC 2 cut(s) 208, 927
PscI ACATGT 1 cut(s) 422
PshAI GACNNNNGTC 2 cut(s) 218, 785
PsiI TTATAA 1 cut(s) 828
Psp124BI GAGCTC 1 cut(s) 912
Psp6I CCWGG 6 cut(s) 207, 382, 566, 1205, 1253, 1556
PspFI CCCAGC 1 cut(s) 1957
PspGI CCWGG 6 cut(s) 207, 382, 566, 1205, 1253, 1556
PspN4I GGNNCC 2 cut(s) 1475, 2040
PstI CTGCAG 1 cut(s) 1137
PstNI CAGNNNCTG 1 cut(s) 857
PsuI RGATCY 1 cut(s) 2038
PsyI GACNNNGTC 1 cut(s) 41
RsaI GTAC 2 cut(s) 1492, 1535
RsaNI GTAC 2 cut(s) 1491, 1534
RseI CAYNNNNRTG 4 cut(s) 354, 456, 789, 1001
SacI GAGCTC 1 cut(s) 912
SaqAI TTAA 5 cut(s) 257, 300, 465, 1119, 1386
SatI GCNGC 8 cut(s) 192, 605, 642, 1167, 1295, 1361, 1608, 1857
Sau3AI GATC 8 cut(s) 315, 415, 586, 705, 1030, 1370, 1587, 2038
SchI GAGTC 2 cut(s) 208, 927
SduI GDGCHC 5 cut(s) 179, 325, 574, 912, 1111
SfaNI GCATC 3 cut(s) 754, 1178, 1468
SfcI CTRYAG 3 cut(s) 814, 1133, 1547
Sfr274I CTCGAG 1 cut(s) 83
SlaI CTCGAG 1 cut(s) 83
SmaI CCCGGG 1 cut(s) 1626
SmiMI CAYNNNNRTG 4 cut(s) 354, 456, 789, 1001
SmlI CTYRAG 2 cut(s) 83, 578
SmoI CTYRAG 2 cut(s) 83, 578
SpeI ACTAGT 1 cut(s) 1573
Sse9I AATT 8 cut(s) 24, 78, 162, 913, 1112, 1708, 1895, 1932
SsiI CCGC 2 cut(s) 1268, 1304
SspMI CTAG 9 cut(s) 54, 392, 543, 671, 1275, 1311, 1464, 1574, 1970
SstI GAGCTC 1 cut(s) 912
TaaI ACNGT 8 cut(s) 43, 305, 327, 730, 815, 824, 1597, 1945
TaiI ACGT 1 cut(s) 1716
TaqI TCGA 6 cut(s) 84, 235, 919, 1664, 1736, 1994
TasI AATT 8 cut(s) 24, 78, 162, 913, 1112, 1708, 1895, 1932
TfiI GAWTC 2 cut(s) 244, 277
Tru1I TTAA 5 cut(s) 257, 300, 465, 1119, 1386
Tru9I TTAA 5 cut(s) 257, 300, 465, 1119, 1386
TscAI CASTG 5 cut(s) 270, 325, 330, 622, 1083
TseFI GTSAC 3 cut(s) 43, 620, 1078
TseI GCWGC 8 cut(s) 191, 604, 641, 1166, 1294, 1360, 1607, 1856
Tsp45I GTSAC 3 cut(s) 43, 620, 1078
TspGWI ACGGA 1 cut(s) 1508
TspMI CCCGGG 1 cut(s) 1624
TspRI CASTG 5 cut(s) 270, 325, 330, 622, 1083
Tth111I GACNNNGTC 1 cut(s) 41
VneI GTGCAC 1 cut(s) 321
XapI RAATTY 2 cut(s) 78, 1932
XceI RCATGY 3 cut(s) 339, 426, 1000
XhoI CTCGAG 1 cut(s) 83
XmaI CCCGGG 1 cut(s) 1624
XmiI GTMKAC 3 cut(s) 427, 774, 975
XmnI GAANNNNTTC 1 cut(s) 78
XspI CTAG 9 cut(s) 54, 392, 543, 671, 1275, 1311, 1464, 1574, 1970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.