Rh2DG429400

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000496
Physical Location & Seq
Forward (+)
62049146 .. 62051824
2679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG429400.1

Sequence Viewer

Length: 1989 bp
ATGGATTCTAGACTTTTAGTGGCAATTAAGAGAAATGACATACCCACATTTAGCCGGTTAGTCAAAAAAAACAACGGAATTCTTGAGCAGAGAGAAGCTGATACTTGGAACACACCGTTACACCTTGTGTCAAAGTTTGGTCATGCTGACATGGTGTCTGAAATTGTCACGTCACGCCCTGATTTGGTTGCTGCTGAGAATAAGGGCCTGGAGACTCCTGTCCATGAAGCTTGTCGAATAGGGAATGCCGAGATCTTGAAGCTGTTACTAAATGCCAATCCTGGGGCAGCTCATAAGCTTAACATCGAAAAAAAAAGCGCCCTTTTCTTGGCCTGCAGCTATGGCCATGTTGATGCGGTGAATGTCCTACTGAATGAGCCTGGGATGCTGGATTTGATCGAAGATGGGATTGATCAAACTTGCATCCATGCTGCTGTGTCTGGTGGACACATGGATGTTGTTGGAGAGTTGTTAAATGTTTGTCCTGGCCTTGCAAGTAGGATTGATGAGAATGGAAACTCGCCATTGCACTCTGCATCTGAAAAAGGACACAGGGAGATTACCTGGGCGCTCCTAAAGCTCGACCCAAAACTTGCTCAGCAATACAATAACAAGGGTTACACACCGTTGCACTTGGCAACAATAAACTACAGAGCTTCAGTCATTAAAGGATTTTTTTTCATGGCTCCTGCATCTTTTCAGCTAGGCACAAAAGATGGGGAGACTGTGTTTCACTTGGCTGTGAGATTTGGCCGATATGATGCTTTAGTTTTCTTGATCCTTGTCTGCAACTGTATGAATCTCTTTGGTCTTGGAGATCGTTACGGAAACACCATCTTACATCTTGCAGCTTATGGAGCACAACATCAGATAGCAGAGTACCTCCTCAACAAAACACGAGTGGAGATCAACTGTCGAAATTGCAGAGGACTCACAGCACTTGACATTCTTGACCAGGCCAAGGACAGTCTAGAAAATCGGCATCTTGCAGCCATATTCATGAAAGCAGGAGGTAAAAGGAGCACGGAGTTGTTATCTCAATCAGAAAATGCAGGTAGAGTCAATGCAGTGACTCCCCTTGACAACATGCCAAAAAGAGCCCAATTTGTTACAAAGCATGAATTGCAGTTGACCACTAAAAATCATGAAATATGTTCTTCCCCTGCATCCAATACCCCATCTAGTTTTTCATCACCCATGTCAAGAAACTCATCTAGTTTTCCATCACCTCATTCTAGCCGGTCATCGCCTAATCTGCCATCACCACAGACTAACAACTCATCGCCTCAACATCCAGTAAGGGGGGTGTTTGACAATAAAATTCAAATGCCGGAGCCCATGGTGTCTACCATGGTGACACAACACAAGCCTCCTAGTGAGAATTTTTACGAACCCCGAAGGAAGCAGCAAAAGGCACATAGAGAGGCATTACAAAATGCCAGGAACGCTATAATACTAGTTGCCAGTTTGATCGCCACAGTTACTTTTGCTGCTGGTATCAACCCCCCGGGTGGTGTTTATCAGGAGGGACTAATGAAAGGGAAGTCAATTGCAGGCAAAACAACAGCTTTCAAGGTCTTTGCAATAAGCAATCATGCTGCGCTGTTCACATCACTCTCCATAGTTGTTGTTGTTGTCAGTATCATCCCCTATCAGAGAAAGCCATTGACACGACTATTGGTGGTTGCTCACAAGGTCATGTGGCTAGCTGTTGCATTCATGGCAACAAGTTATGTTACAGCAACATGGGTGATCTTGCCACATAGTGAGCGTAAAGAATTGGTGTTTGTAGCTTTATTGGCTGTGAGCATTGGCAGTTTGGGAACGGCTTTTATTGGTCTTAGTGTGATGCTAGTTAATCACTGGCTGAGGAAATCGAAGTGGAGAAAGGAAAGAAGAGAAAGAGGAGAGGCTAATGCAGACCTTGAAATGGGAAGCCAAAATTCAGACATGGAGAGCACATACAATCTGGGATATCACTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

662

Amino Acids

72.87

Weight (kDa)

9.22

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 92 4.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 71 - 125 4.8e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 75 - 158 1.2e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 108 - 194 2.2e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 142 - 221 1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 210 - 306 2.1e-09 Ankyrin repeats (3 copies)
Ank_5 PF13857 272 - 316 1.5e-06 Ankyrin repeats (many copies)
PGG PF13962 475 - 584 3.8e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1043
AccI GTMKAC 1 cut(s) 1346
AciI CCGC 1 cut(s) 356
AclWI GGATC 1 cut(s) 772
AcoI YGGCCR 2 cut(s) 343, 751
AcsI RAATTY 4 cut(s) 78, 1320, 1381, 1942
AcuI CTGAAG 1 cut(s) 642
AdeI CACNNNGTG 2 cut(s) 127, 1766
AfaI GTAC 1 cut(s) 881
AfiI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1301, 1511, 1930
AgsI TTSAA 4 cut(s) 259, 1325, 1573, 1928
AhdI GACNNNNNGTC 1 cut(s) 154
AhlI ACTAGT 1 cut(s) 1456
AjiI CACGTC 1 cut(s) 171
AjnI CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1439
Alw21I GWGCWC 3 cut(s) 862, 1025, 1961
Alw26I GTCTC 2 cut(s) 206, 716
AlwI GGATC 1 cut(s) 772
Ama87I CYCGRG 1 cut(s) 1507
AoxI GGCC 6 cut(s) 205, 330, 343, 487, 751, 957
ApeKI GCWGC 9 cut(s) 191, 287, 336, 431, 848, 989, 1405, 1490, 1598
ApoI RAATTY 4 cut(s) 78, 1320, 1381, 1942
AspLEI GCGC 3 cut(s) 320, 571, 1603
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 2 cut(s) 1508, 1509
AsuHPI GGTGA 6 cut(s) 370, 1185, 1218, 1254, 1366, 1762
AsuNHI GCTAGC 1 cut(s) 1705
AvaI CYCGRG 1 cut(s) 1507
BalI TGGCCA 1 cut(s) 345
BanII GRGCYC 2 cut(s) 1102, 1338
BauI CACGAG 1 cut(s) 897
Bbv12I GWGCWC 3 cut(s) 862, 1025, 1961
BbvCI CCTCAGC 1 cut(s) 1868
BbvI GCAGC 9 cut(s) 178, 299, 348, 418, 860, 1001, 1417, 1477, 1585
BccI CCATC 6 cut(s) 398, 710, 842, 1186, 1231, 1267
BceAI ACGGC 1 cut(s) 1842
BciT130I CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1441
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 2 cut(s) 1508, 1509
BcoDI GTCTC 2 cut(s) 206, 716
BcuI ACTAGT 1 cut(s) 1456
BfmI CTRYAG 2 cut(s) 334, 649
BfoI RGCGCY 2 cut(s) 321, 572
BfuAI ACCTGC 1 cut(s) 1043
BglII AGATCT 1 cut(s) 252
BisI GCNGC 9 cut(s) 192, 288, 337, 432, 849, 990, 1406, 1491, 1599
BlpI GCTNAGC 1 cut(s) 597
BlsI GCNGC 9 cut(s) 193, 289, 338, 433, 850, 991, 1407, 1492, 1600
Bme1390I CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1441, 1508, 1509
BmeRI GACNNNNNGTC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 1507
BmgBI CACGTC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 687, 1335
BmrFI CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1441, 1508, 1509
BmsI GCATC 9 cut(s) 343, 375, 432, 545, 701, 751, 991, 1175, 1839
BmtI GCTAGC 1 cut(s) 1709
BoxI GACNNNNGTC 1 cut(s) 218
BpmI CTGGAG 1 cut(s) 230
Bpu10I CCTNAGC 1 cut(s) 1868
Bpu1102I GCTNAGC 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 104
BpuMI CCSGG 2 cut(s) 1508, 1509
BsaJI CCNNGG 8 cut(s) 281, 380, 564, 960, 1338, 1350, 1506, 1507
BsaXI ACNNNNNCTCC 2 cut(s) 713, 743
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1301, 1511, 1930
Bse118I RCCGGY 2 cut(s) 54, 1239
Bse1I ACTGG 3 cut(s) 1295, 1464, 1868
Bse3DI GCAATG 1 cut(s) 524
BseBI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1441
BseDI CCNNGG 8 cut(s) 281, 380, 564, 960, 1338, 1350, 1506, 1507
BseGI GGATG 6 cut(s) 390, 423, 460, 1166, 1291, 1644
BseLI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1301, 1511, 1930
BseMI GCAATG 1 cut(s) 524
BseMII CTCAG 3 cut(s) 186, 611, 1859
BseNI ACTGG 3 cut(s) 1295, 1464, 1868
BseRI GAGGAG 2 cut(s) 875, 1920
BseXI GCAGC 9 cut(s) 178, 299, 348, 418, 860, 1001, 1417, 1477, 1585
BshFI GGCC 6 cut(s) 207, 332, 345, 489, 753, 959
BsiHKAI GWGCWC 3 cut(s) 862, 1025, 1961
BsiHKCI CYCGRG 1 cut(s) 1507
BsiSI CCGG 4 cut(s) 55, 1240, 1331, 1508
BslFI GGGAC 1 cut(s) 1542
BslI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 961, 1301, 1511, 1930
BsmAI GTCTC 2 cut(s) 206, 716
BsmFI GGGAC 1 cut(s) 1542
BsmI GAATGC 2 cut(s) 250, 1715
BsnI GGCC 6 cut(s) 207, 332, 345, 489, 753, 959
BsoBI CYCGRG 1 cut(s) 1507
Bsp1286I GDGCHC 5 cut(s) 862, 1025, 1102, 1338, 1961
Bsp143I GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
Bsp1720I GCTNAGC 1 cut(s) 597
Bsp19I CCATGG 2 cut(s) 1338, 1350
BspACI CCGC 1 cut(s) 356
BspANI GGCC 6 cut(s) 207, 332, 345, 489, 753, 959
BspCNI CTCAG 3 cut(s) 187, 610, 1860
BspHI TCATGA 2 cut(s) 999, 1144
BspLI GGNNCC 2 cut(s) 687, 1335
BspMAI CTGCAG 1 cut(s) 338
BspMI ACCTGC 1 cut(s) 1043
BspOI GCTAGC 1 cut(s) 1709
BspPI GGATC 1 cut(s) 772
BsrDI GCAATG 1 cut(s) 524
BsrFI RCCGGY 2 cut(s) 54, 1239
BsrI ACTGG 3 cut(s) 1295, 1464, 1868
BssAI RCCGGY 2 cut(s) 54, 1239
BssECI CCNNGG 8 cut(s) 281, 380, 564, 960, 1338, 1350, 1506, 1507
BssMI GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
BssSI CACGAG 1 cut(s) 897
BssT1I CCWWGG 3 cut(s) 960, 1338, 1350
Bst2BI CACGAG 1 cut(s) 897
Bst2UI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1441
Bst4CI ACNGT 7 cut(s) 117, 627, 727, 794, 914, 968, 1480
Bst6I CTCTTC 1 cut(s) 1891
BstAPI GCANNNNNTGC 1 cut(s) 1123
BstC8I GCNNGC 3 cut(s) 334, 1555, 1707
BstDEI CTNAG 4 cut(s) 195, 597, 1841, 1868
BstDSI CCRYGG 2 cut(s) 1338, 1350
BstF5I GGATG 6 cut(s) 390, 423, 460, 1166, 1291, 1644
BstH2I RGCGCY 2 cut(s) 321, 572
BstHHI GCGC 3 cut(s) 320, 571, 1603
BstKTI GATC 8 cut(s) 255, 399, 415, 780, 820, 909, 1473, 1755
BstMAI GTCTC 2 cut(s) 206, 716
BstMBI GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
BstMWI GCNNNNNNNGC 9 cut(s) 342, 385, 577, 857, 1123, 1255, 1445, 1721, 1799
BstNI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1441
BstNSI RCATGY 1 cut(s) 1090
BstPAI GACNNNNGTC 1 cut(s) 218
BstSCI CCNGG 9 cut(s) 207, 280, 379, 484, 563, 954, 1439, 1506, 1507
BstSFI CTRYAG 2 cut(s) 334, 649
BstV1I GCAGC 9 cut(s) 178, 299, 348, 418, 860, 1001, 1417, 1477, 1585
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 6 cut(s) 207, 332, 345, 489, 753, 959
BtgI CCRYGG 2 cut(s) 1338, 1350
BtgZI GCGATG 2 cut(s) 1230, 1266
BtrI CACGTC 1 cut(s) 171
BtsCI GGATG 6 cut(s) 390, 423, 460, 1166, 1291, 1644
BtsI GCAGTG 1 cut(s) 1074
BtsIMutI CAGTG 2 cut(s) 1074, 1861
BveI ACCTGC 1 cut(s) 1043
Cac8I GCNNGC 3 cut(s) 334, 1555, 1707
CciI TCATGA 2 cut(s) 999, 1144
CfoI GCGC 3 cut(s) 320, 571, 1603
Cfr10I RCCGGY 2 cut(s) 54, 1239
Cfr13I GGNCC 1 cut(s) 205
Cfr9I CCCGGG 1 cut(s) 1507
Csp6I GTAC 1 cut(s) 880
CviQI GTAC 1 cut(s) 880
DdeI CTNAG 4 cut(s) 195, 597, 1841, 1868
DpnI GATC 8 cut(s) 254, 398, 414, 779, 819, 908, 1472, 1754
DpnII GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
DraIII CACNNNGTG 2 cut(s) 127, 1766
DriI GACNNNNNGTC 1 cut(s) 154
EaeI YGGCCR 2 cut(s) 343, 751
Eam1104I CTCTTC 1 cut(s) 1891
Eam1105I GACNNNNNGTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 1891
Eco130I CCWWGG 3 cut(s) 960, 1338, 1350
Eco24I GRGCYC 2 cut(s) 1102, 1338
Eco32I GATATC 1 cut(s) 1976
Eco57I CTGAAG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 1507
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 78
EcoRII CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1439
EcoRV GATATC 1 cut(s) 1976
EcoT14I CCWWGG 3 cut(s) 960, 1338, 1350
EcoT38I GRGCYC 2 cut(s) 1102, 1338
ErhI CCWWGG 3 cut(s) 960, 1338, 1350
FaqI GGGAC 1 cut(s) 1542
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 1346
Fnu4HI GCNGC 9 cut(s) 192, 288, 337, 432, 849, 990, 1406, 1491, 1599
FokI GGATG 6 cut(s) 397, 410, 467, 1153, 1278, 1631
FriOI GRGCYC 2 cut(s) 1102, 1338
Fsp4HI GCNGC 9 cut(s) 192, 288, 337, 432, 849, 990, 1406, 1491, 1599
GlaI GCGC 3 cut(s) 319, 570, 1602
GluI GCNGC 9 cut(s) 192, 288, 337, 432, 849, 990, 1406, 1491, 1599
GsuI CTGGAG 1 cut(s) 230
HaeII RGCGCY 2 cut(s) 321, 572
HaeIII GGCC 6 cut(s) 207, 332, 345, 489, 753, 959
HapII CCGG 4 cut(s) 55, 1240, 1331, 1508
HhaI GCGC 3 cut(s) 320, 571, 1603
Hin6I GCGC 3 cut(s) 318, 569, 1601
HinP1I GCGC 3 cut(s) 318, 569, 1601
HincII GTYRAC 1 cut(s) 1131
HindII GTYRAC 1 cut(s) 1131
HindIII AAGCTT 2 cut(s) 228, 296
HinfI GANTC 6 cut(s) 5, 214, 799, 930, 1059, 1072
HpaII CCGG 4 cut(s) 55, 1240, 1331, 1508
HphI GGTGA 6 cut(s) 370, 1185, 1218, 1254, 1366, 1762
Hpy166II GTNNAC 4 cut(s) 446, 1131, 1347, 1608
Hpy188I TCNGA 6 cut(s) 160, 541, 870, 1045, 1656, 1948
Hpy8I GTNNAC 4 cut(s) 446, 1131, 1347, 1608
HpyAV CCTTC 1 cut(s) 1392
HpyCH4III ACNGT 7 cut(s) 117, 627, 727, 794, 914, 968, 1480
HpyCH4IV ACGT 1 cut(s) 170
HpyF10VI GCNNNNNNNGC 9 cut(s) 342, 385, 577, 857, 1123, 1255, 1445, 1721, 1799
HpyF3I CTNAG 4 cut(s) 195, 597, 1841, 1868
HpySE526I ACGT 1 cut(s) 170
HspAI GCGC 3 cut(s) 318, 569, 1601
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
LmnI GCTCC 5 cut(s) 576, 691, 857, 1020, 1333
Lsp1109I GCAGC 9 cut(s) 178, 299, 348, 418, 860, 1001, 1417, 1477, 1585
LweI GCATC 9 cut(s) 343, 375, 432, 545, 701, 751, 991, 1175, 1839
MaeII ACGT 1 cut(s) 170
MalI GATC 8 cut(s) 254, 398, 414, 779, 819, 908, 1472, 1754
MboI GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
MboII GAAGA 3 cut(s) 413, 1149, 1908
MfeI CAATTG 1 cut(s) 1548
MflI RGATCY 1 cut(s) 252
MhlI GDGCHC 5 cut(s) 862, 1025, 1102, 1338, 1961
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 4 cut(s) 208, 924, 1066, 1068
MmeI TCCRAC 1 cut(s) 442
Mox20I TGGCCA 1 cut(s) 345
MscI TGGCCA 1 cut(s) 345
MseI TTAA 5 cut(s) 27, 300, 473, 666, 1857
MslI CAYNNNNRTG 3 cut(s) 351, 453, 998
Msp20I TGGCCA 1 cut(s) 345
MspI CCGG 4 cut(s) 55, 1240, 1331, 1508
MspR9I CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1441, 1508, 1509
MunI CAATTG 1 cut(s) 1548
Mva1269I GAATGC 2 cut(s) 250, 1715
MvaI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1441
MwoI GCNNNNNNNGC 9 cut(s) 342, 385, 577, 857, 1123, 1255, 1445, 1721, 1799
NciI CCSGG 2 cut(s) 1508, 1509
NcoI CCATGG 2 cut(s) 1338, 1350
NdeII GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
NheI GCTAGC 1 cut(s) 1705
NlaIV GGNNCC 2 cut(s) 687, 1335
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 4 cut(s) 166, 171, 1069, 1354
NspI RCATGY 1 cut(s) 1090
PagI TCATGA 2 cut(s) 999, 1144
PctI GAATGC 2 cut(s) 250, 1715
PfeI GAWTC 2 cut(s) 5, 799
PkrI GCNGC 9 cut(s) 193, 289, 338, 433, 850, 991, 1407, 1492, 1600
PleI GAGTC 4 cut(s) 208, 924, 1066, 1067
PpsI GAGTC 4 cut(s) 208, 924, 1066, 1067
PshAI GACNNNNGTC 1 cut(s) 218
Psp6I CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1439
PspGI CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1439
PspN4I GGNNCC 2 cut(s) 687, 1335
PspPI GGNCC 1 cut(s) 205
PstI CTGCAG 1 cut(s) 338
PsuI RGATCY 1 cut(s) 252
RsaI GTAC 1 cut(s) 881
RsaNI GTAC 1 cut(s) 880
RseI CAYNNNNRTG 3 cut(s) 351, 453, 998
SaqAI TTAA 5 cut(s) 27, 300, 473, 666, 1857
SatI GCNGC 9 cut(s) 192, 288, 337, 432, 849, 990, 1406, 1491, 1599
Sau3AI GATC 8 cut(s) 252, 396, 412, 777, 817, 906, 1470, 1752
Sau96I GGNCC 1 cut(s) 205
SchI GAGTC 4 cut(s) 208, 924, 1066, 1068
ScrFI CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1441, 1508, 1509
SduI GDGCHC 5 cut(s) 862, 1025, 1102, 1338, 1961
SfaNI GCATC 9 cut(s) 343, 375, 432, 545, 701, 751, 991, 1175, 1839
SfcI CTRYAG 2 cut(s) 334, 649
SmaI CCCGGG 1 cut(s) 1509
SmiMI CAYNNNNRTG 3 cut(s) 351, 453, 998
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
SpeI ACTAGT 1 cut(s) 1456
SsiI CCGC 1 cut(s) 356
StyD4I CCNGG 9 cut(s) 207, 280, 379, 484, 563, 954, 1439, 1506, 1507
StyI CCWWGG 3 cut(s) 960, 1338, 1350
TaaI ACNGT 7 cut(s) 117, 627, 727, 794, 914, 968, 1480
TaiI ACGT 1 cut(s) 173
TaqI TCGA 6 cut(s) 235, 306, 399, 582, 916, 1877
TfiI GAWTC 2 cut(s) 5, 799
Tru1I TTAA 5 cut(s) 27, 300, 473, 666, 1857
Tru9I TTAA 5 cut(s) 27, 300, 473, 666, 1857
TscAI CASTG 2 cut(s) 1074, 1868
TseFI GTSAC 4 cut(s) 166, 171, 1069, 1354
TseI GCWGC 9 cut(s) 191, 287, 336, 431, 848, 989, 1405, 1490, 1598
Tsp45I GTSAC 4 cut(s) 166, 171, 1069, 1354
TspGWI ACGGA 3 cut(s) 90, 840, 1040
TspMI CCCGGG 1 cut(s) 1507
TspRI CASTG 2 cut(s) 1074, 1868
XapI RAATTY 4 cut(s) 78, 1320, 1381, 1942
XbaI TCTAGA 2 cut(s) 8, 970
XceI RCATGY 1 cut(s) 1090
XmaI CCCGGG 1 cut(s) 1507
XmiI GTMKAC 1 cut(s) 1346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.