Rroxscaffold_2G00105210

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000496
Physical Location & Seq
Reverse (-)
28639845 .. 28642631
2787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00105210.1

Sequence Viewer

Length: 2136 bp
ATGATTTTTTCCAAAAACAAAGAGGTTACAATGGATTTCAGGATTGTGGAGGCAATTGAGAGAAAGGACACAGTCACATTTGCTAGCTTAGTCCGAGAAAATGAAGGAATTCTCAAGCAAAGAGAAGCCGATACTTGCAACACGCCATTACACCTTGTGTCAAAGTTTGGATACCTTGAAATGGTGTCTGAAATTGTTTCTTTGTGCCCGGACATGGTTGCTGCTGAGAATAAGAACCAGGAGACTCCAGTCCATGAAGCTTGTCGAACAGGGAATCCCCGGATTTTAAAGACACTGCTGGAAGCGAATCCTGAGGTAGTTAGTAAGCTTAACAGTAAAGAAAAGATCAGTGCACTTTCTCTGGCATGTAGCTATGGTCATCTTGATGTGGTGAGGCTCTTACTGAAAGAGCCTGGGAAGCTAGGTTTGGGGAAAGGAGGGTTTGATCAAACATGTATACACTTGGCTGTCTCTGGTGGACACATAGATGTTGTTAAAGAGTTGCTAAGAGTGTGTCCTGACCTTGCTTATATGGTTGATGAGAAAGGAAACTATCCATTGCACTATGCAACTAGCAAAGAGAACAGGGAGATAACCTGGGCACTCCTCAAGCTTGATCCAAAGCTTGCTCAGCAGCACAATCTCAGTGGTCACACGCCCTTGCACTCGGCAGCAATAAACTACAAAGTCTCAGTCCTTCAGGTGTTCGTCTCAATGGCTAAACCAGCTTTTCAGATCGTAACAAAAGCCGGTGAGACGGTATTCCACTTGGTTGTGAAATATGGGCGATATGATGCTTTAGTATACTTGACCCATGTCTGTGATGATATGGATTTCTTCGACTGTAGAGACTGTTATAATAACACCATCCTACATCTTGCAGTTTCTGAAGCACAACATAAGATAGCAGAGTACCTAATCAGCAAAAAGAAAGTAGAGCTCAATTCTCGAAACAATGAAGGACTCACAGCCTTTGACCTCCTCAAACAGTGCAAGGAAAGTGTAGACAATCAGCGTCTCGAATCCATGCTAATGAAAGCAGGAGGTAAAACAAGGATTGAGCTGTTATCTACTTCACCAAAAGCAGATAAAGCCACCGCTCAGCCAGTGACACTTCCTGAAAACATTCCGAAACGAGCACAATTCGTTAAAGAGTATGAACTGCAGTTGTCCATCATAAATGAGATAGCTTCTGCGGCATCCAAGTCCCCATCAAGCTCATCAGCACCTATGTCCAGGATGTCATCACATTTTCCATCACCCCAATCCAGCAAGTCTTCGCCTAGGCTACCATCACCGCAATCTAGCAAGTCATCACCTAAGCTGCCATCACCGCCATCTAGCAAGTCATCGCCTCAGCCTCAGGTTGGGGAAGGTTTATCACCTCAGCAGCTAGTTGGATCAGCATTTGAAGTTAAGGAGGGACTGGATTATGAAAGACAAAAGAAGCAAGAGTTTCTTCTGCAAACCTTTGCCAGACAACACAAGCATCCTAGAAAATGGAACCAATCAGAAATGAGTACGGAGATTTTCTACAACCGGCGCAGGAAGCATGAAAAGGTGTACACAGAGGCACTACAGAATGCCAGGAACACCATAACACTAGTTGCCATTTTGATCGCCACGGTTACTTTTGCTGCTGGCATTAGTCCCCCGGGTGGTGTTTATCAGGAGGGACTTATGAAAGGGAAGTCAATAGCAGGAACAACAACTGCTTTCAAGGTGTTTGAAATAAGCAATTACGTCGCACTATTCACATCACTCTCGATAGTTGTTGTTCTTGTGAGTATCATTCCATATCGGAGAAAGCCATTGATAAGATTGTTGAGGGTTGCTCATAAGGTAATGTGGGTAGCTGTGGCATTCATGGCAACAGGGTATGTTGCAGCCACATGGGTTATCATGCAACAAAATCAGAAAAACAAATTGTTGTTTTTAGCCTTTTTGACTATAAGCATTGGAATTCTGGGAACAGTTTTCATTTGGCTGGGTGTTATGCTAGTTGTTCATTGCCTGCGAAAGTCGAAGTGGAGGAAGGGAAGAAGAGAGATTGGGGAGGCTGATGAGGATCCTGAAATGGGAAGCCAAAACTCGGATGTTGATAGCACATACAATCAAGGATATCATTCATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

711

Amino Acids

79.34

Weight (kDa)

9.18

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 42 - 106 1.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 111 - 169 7.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 119 - 206 1.1e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 153 - 237 2.1e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 221 - 317 7e-09 Ankyrin repeats (3 copies)
PGG PF13962 524 - 633 1e-29 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 858
AccBSI CCGCTC 1 cut(s) 1100
AccI GTMKAC 3 cut(s) 457, 804, 1005
AciI CCGC 4 cut(s) 1098, 1196, 1298, 1334
AclWI GGATC 4 cut(s) 611, 1408, 2063, 2076
AcsI RAATTY 2 cut(s) 108, 1962
AcuI CTGAAG 2 cut(s) 683, 909
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 3 cut(s) 914, 1522, 1565
AfiI CCNNNNNNNGG 6 cut(s) 181, 214, 1367, 1658, 2078, 2092
AflIII ACRYGT 1 cut(s) 452
AgsI TTSAA 4 cut(s) 179, 1412, 1720, 1730
AhlI ACTAGT 1 cut(s) 1603
AjnI CCWGG 5 cut(s) 237, 412, 596, 1235, 1586
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AloI GAACNNNNNNTCC 2 cut(s) 259, 291
Alw21I GWGCWC 3 cut(s) 355, 942, 1141
Alw26I GTCTC 7 cut(s) 236, 475, 694, 715, 749, 843, 1022
Alw44I GTGCAC 1 cut(s) 351
AlwI GGATC 4 cut(s) 611, 1408, 2063, 2076
AlwNI CAGNNNCTG 1 cut(s) 887
Ama87I CYCGRG 1 cut(s) 1654
ApaLI GTGCAC 1 cut(s) 351
ApeKI GCWGC 7 cut(s) 221, 634, 671, 1324, 1390, 1637, 1886
ApoI RAATTY 2 cut(s) 108, 1962
ArsI GACNNNNNNTTYG 2 cut(s) 678, 710
Asp700I GAANNNNTTC 2 cut(s) 108, 1125
AspA2I CCTAGG 1 cut(s) 1283
AspLEI GCGC 1 cut(s) 1545
AsuC2I CCSGG 4 cut(s) 209, 280, 1655, 1656
AsuHPI GGTGA 8 cut(s) 403, 764, 1068, 1251, 1287, 1308, 1323, 1374
AsuNHI GCTAGC 1 cut(s) 83
AvaI CYCGRG 1 cut(s) 1654
AvrII CCTAGG 1 cut(s) 1283
AxyI CCTNAGG 2 cut(s) 312, 1362
BaeGI GKGCMC 3 cut(s) 209, 355, 604
BamHI GGATCC 1 cut(s) 2068
BanII GRGCYC 1 cut(s) 942
BbsI GAAGAC 1 cut(s) 1269
Bbv12I GWGCWC 3 cut(s) 355, 942, 1141
BbvCI CCTCAGC 2 cut(s) 1356, 1386
BbvI GCAGC 7 cut(s) 208, 646, 683, 1311, 1402, 1624, 1898
BccI CCATC 7 cut(s) 875, 1181, 1219, 1264, 1300, 1336, 1345
BcgI CGANNNNNNTGC 2 cut(s) 1726, 1760
BciT130I CCWGG 5 cut(s) 239, 414, 598, 1237, 1588
BciVI GTATCC 1 cut(s) 164
BclI TGATCA 1 cut(s) 445
BcnI CCSGG 4 cut(s) 209, 280, 1655, 1656
BcoDI GTCTC 7 cut(s) 236, 475, 694, 715, 749, 843, 1022
BcuI ACTAGT 1 cut(s) 1603
BfmI CTRYAG 3 cut(s) 844, 1163, 1577
BfuI GTATCC 1 cut(s) 164
BisI GCNGC 8 cut(s) 222, 635, 672, 1197, 1325, 1391, 1638, 1887
BlnI CCTAGG 1 cut(s) 1283
BlpI GCTNAGC 2 cut(s) 630, 1101
BlsI GCNGC 8 cut(s) 223, 636, 673, 1198, 1326, 1392, 1639, 1888
Bme1390I CCNGG 9 cut(s) 209, 239, 280, 414, 598, 1237, 1588, 1655, 1656
BmeT110I CYCGRG 1 cut(s) 1654
BmiI GGNNCC 2 cut(s) 1505, 2070
BmrFI CCNGG 9 cut(s) 209, 239, 280, 414, 598, 1237, 1588, 1655, 1656
BmsI GCATC 3 cut(s) 784, 1208, 1498
BmtI GCTAGC 1 cut(s) 87
BoxI GACNNNNGTC 2 cut(s) 248, 815
BpiI GAAGAC 1 cut(s) 1269
BplI GAGNNNNNCTC 2 cut(s) 1819, 1851
BpmI CTGGAG 1 cut(s) 231
Bpu10I CCTNAGC 3 cut(s) 1320, 1356, 1386
Bpu1102I GCTNAGC 2 cut(s) 630, 1101
BpuEI CTTGAG 2 cut(s) 98, 593
BpuMI CCSGG 4 cut(s) 209, 280, 1655, 1656
BsaBI GATNNNNATC 1 cut(s) 2067
BsaJI CCNNGG 7 cut(s) 278, 413, 597, 1283, 1623, 1653, 1654
Bsc4I CCNNNNNNNGG 6 cut(s) 181, 214, 1367, 1658, 2078, 2092
Bse118I RCCGGY 2 cut(s) 749, 1539
Bse1I ACTGG 3 cut(s) 248, 1106, 1431
Bse21I CCTNAGG 2 cut(s) 312, 1362
Bse3DI GCAATG 2 cut(s) 557, 2008
Bse8I GATNNNNATC 1 cut(s) 2067
BseBI CCWGG 5 cut(s) 239, 414, 598, 1237, 1588
BseDI CCNNGG 7 cut(s) 278, 413, 597, 1283, 1623, 1653, 1654
BseGI GGATG 5 cut(s) 867, 1199, 1245, 1489, 2101
BseJI GATNNNNATC 1 cut(s) 2067
BseLI CCNNNNNNNGG 6 cut(s) 181, 214, 1367, 1658, 2078, 2092
BseMI GCAATG 2 cut(s) 557, 2008
BseMII CTCAG 9 cut(s) 216, 303, 644, 658, 705, 1115, 1370, 1376, 1400
BseNI ACTGG 3 cut(s) 248, 1106, 1431
BseRI GAGGAG 2 cut(s) 596, 971
BseSI GKGCMC 3 cut(s) 209, 355, 604
BseXI GCAGC 7 cut(s) 208, 646, 683, 1311, 1402, 1624, 1898
BseYI CCCAGC 1 cut(s) 1987
BsiHKAI GWGCWC 3 cut(s) 355, 942, 1141
BsiHKCI CYCGRG 1 cut(s) 1654
BsiSI CCGG 5 cut(s) 209, 280, 750, 1540, 1655
BslFI GGGAC 4 cut(s) 1192, 1437, 1635, 1689
BslI CCNNNNNNNGG 6 cut(s) 181, 214, 1367, 1658, 2078, 2092
BsmAI GTCTC 7 cut(s) 236, 475, 694, 715, 749, 843, 1022
BsmBI CGTCTC 3 cut(s) 715, 749, 1022
BsmFI GGGAC 4 cut(s) 1192, 1437, 1635, 1689
BsmI GAATGC 2 cut(s) 1588, 1862
BsoBI CYCGRG 1 cut(s) 1654
Bsp1286I GDGCHC 5 cut(s) 209, 355, 604, 942, 1141
Bsp1407I TGTACA 1 cut(s) 1563
Bsp143I GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
Bsp1720I GCTNAGC 2 cut(s) 630, 1101
BspACI CCGC 4 cut(s) 1098, 1196, 1298, 1334
BspCNI CTCAG 9 cut(s) 217, 304, 643, 657, 704, 1114, 1369, 1375, 1399
BspLI GGNNCC 2 cut(s) 1505, 2070
BspMAI CTGCAG 1 cut(s) 1167
BspOI GCTAGC 1 cut(s) 87
BspPI GGATC 4 cut(s) 611, 1408, 2063, 2076
BsrBI CCGCTC 1 cut(s) 1100
BsrDI GCAATG 2 cut(s) 557, 2008
BsrFI RCCGGY 2 cut(s) 749, 1539
BsrGI TGTACA 1 cut(s) 1563
BsrI ACTGG 3 cut(s) 248, 1106, 1431
BssAI RCCGGY 2 cut(s) 749, 1539
BssECI CCNNGG 7 cut(s) 278, 413, 597, 1283, 1623, 1653, 1654
BssMI GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
BssNAI GTATAC 2 cut(s) 458, 805
BssT1I CCWWGG 1 cut(s) 1283
Bst1107I GTATAC 2 cut(s) 458, 805
Bst2UI CCWGG 5 cut(s) 239, 414, 598, 1237, 1588
Bst4CI ACNGT 8 cut(s) 73, 335, 760, 845, 854, 990, 1627, 1975
Bst6I CTCTTC 1 cut(s) 2038
BstAUI TGTACA 1 cut(s) 1563
BstC8I GCNNGC 4 cut(s) 85, 627, 1642, 2015
BstDSI CCRYGG 1 cut(s) 1623
BstF5I GGATG 5 cut(s) 867, 1199, 1245, 1489, 2101
BstHHI GCGC 1 cut(s) 1545
BstKTI GATC 7 cut(s) 348, 448, 619, 738, 1403, 1620, 2071
BstMAI GTCTC 7 cut(s) 236, 475, 694, 715, 749, 843, 1022
BstMBI GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
BstMWI GCNNNNNNNGC 8 cut(s) 418, 631, 725, 1091, 1196, 1333, 1549, 1868
BstNI CCWGG 5 cut(s) 239, 414, 598, 1237, 1588
BstNSI RCATGY 2 cut(s) 369, 456
BstPAI GACNNNNGTC 2 cut(s) 248, 815
BstSCI CCNGG 9 cut(s) 207, 237, 278, 412, 596, 1235, 1586, 1653, 1654
BstSFI CTRYAG 3 cut(s) 844, 1163, 1577
BstSLI GKGCMC 3 cut(s) 209, 355, 604
BstV1I GCAGC 7 cut(s) 208, 646, 683, 1311, 1402, 1624, 1898
BstV2I GAAGAC 1 cut(s) 1269
BstX2I RGATCY 1 cut(s) 2068
BstYI RGATCY 1 cut(s) 2068
BstZ17I GTATAC 2 cut(s) 458, 805
Bsu36I CCTNAGG 2 cut(s) 312, 1362
BsuI GTATCC 1 cut(s) 164
BtgI CCRYGG 1 cut(s) 1623
BtgZI GCGATG 1 cut(s) 1335
BtsCI GGATG 5 cut(s) 867, 1199, 1245, 1489, 2101
BtsI GCAGTG 1 cut(s) 293
BtsIMutI CAGTG 5 cut(s) 293, 355, 652, 995, 1113
Cac8I GCNNGC 4 cut(s) 85, 627, 1642, 2015
CaiI CAGNNNCTG 1 cut(s) 887
CfoI GCGC 1 cut(s) 1545
Cfr10I RCCGGY 2 cut(s) 749, 1539
Cfr9I CCCGGG 1 cut(s) 1654
CseI GACGC 1 cut(s) 1004
Csp6I GTAC 3 cut(s) 913, 1521, 1564
CspCI CAANNNNNGTGG 2 cut(s) 628, 663
CviQI GTAC 3 cut(s) 913, 1521, 1564
DpnI GATC 7 cut(s) 347, 447, 618, 737, 1402, 1619, 2070
DpnII GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
DraI TTTAAA 1 cut(s) 288
DraIII CACNNNGTG 1 cut(s) 157
Eam1104I CTCTTC 1 cut(s) 2038
EarI CTCTTC 1 cut(s) 2038
Ecl136II GAGCTC 1 cut(s) 940
Eco130I CCWWGG 1 cut(s) 1283
Eco24I GRGCYC 1 cut(s) 942
Eco32I GATATC 1 cut(s) 2123
Eco53kI GAGCTC 1 cut(s) 940
Eco57I CTGAAG 2 cut(s) 683, 909
Eco81I CCTNAGG 2 cut(s) 312, 1362
Eco88I CYCGRG 1 cut(s) 1654
EcoICRI GAGCTC 1 cut(s) 940
EcoRI GAATTC 2 cut(s) 108, 1962
EcoRII CCWGG 5 cut(s) 237, 412, 596, 1235, 1586
EcoRV GATATC 1 cut(s) 2123
EcoT14I CCWWGG 1 cut(s) 1283
EcoT38I GRGCYC 1 cut(s) 942
ErhI CCWWGG 1 cut(s) 1283
Esp3I CGTCTC 3 cut(s) 715, 749, 1022
FalI AAGNNNNNCTT 2 cut(s) 1443, 1475
FaqI GGGAC 4 cut(s) 1192, 1437, 1635, 1689
FbaI TGATCA 1 cut(s) 445
FblI GTMKAC 3 cut(s) 457, 804, 1005
Fnu4HI GCNGC 8 cut(s) 222, 635, 672, 1197, 1325, 1391, 1638, 1887
FokI GGATG 5 cut(s) 854, 1186, 1252, 1476, 2108
FriOI GRGCYC 1 cut(s) 942
Fsp4HI GCNGC 8 cut(s) 222, 635, 672, 1197, 1325, 1391, 1638, 1887
GlaI GCGC 1 cut(s) 1544
GluI GCNGC 8 cut(s) 222, 635, 672, 1197, 1325, 1391, 1638, 1887
GsaI CCCAGC 1 cut(s) 1991
GsuI CTGGAG 1 cut(s) 231
HapII CCGG 5 cut(s) 209, 280, 750, 1540, 1655
HgaI GACGC 1 cut(s) 1004
HhaI GCGC 1 cut(s) 1545
Hin6I GCGC 1 cut(s) 1543
HinP1I GCGC 1 cut(s) 1543
HindIII AAGCTT 4 cut(s) 258, 326, 611, 623
HinfI GANTC 5 cut(s) 244, 274, 307, 963, 1022
HpaII CCGG 5 cut(s) 209, 280, 750, 1540, 1655
HphI GGTGA 8 cut(s) 403, 764, 1068, 1251, 1287, 1308, 1323, 1374
Hpy166II GTNNAC 7 cut(s) 353, 458, 479, 805, 1006, 1564, 1566
Hpy188I TCNGA 9 cut(s) 95, 190, 735, 889, 1131, 1513, 1803, 1917, 2095
Hpy8I GTNNAC 7 cut(s) 353, 458, 479, 805, 1006, 1564, 1566
Hpy99I CGWCG 1 cut(s) 1748
HpyAV CCTTC 5 cut(s) 98, 707, 953, 1367, 2029
HpyCH4III ACNGT 8 cut(s) 73, 335, 760, 845, 854, 990, 1627, 1975
HpyCH4IV ACGT 1 cut(s) 1743
HpyF10VI GCNNNNNNNGC 8 cut(s) 418, 631, 725, 1091, 1196, 1333, 1549, 1868
HpySE526I ACGT 1 cut(s) 1743
HspAI GCGC 1 cut(s) 1543
Ksp22I TGATCA 1 cut(s) 445
Kzo9I GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
Lsp1109I GCAGC 7 cut(s) 208, 646, 683, 1311, 1402, 1624, 1898
LweI GCATC 3 cut(s) 784, 1208, 1498
MaeII ACGT 1 cut(s) 1743
MaeIII GTNAC 6 cut(s) 25, 73, 650, 739, 1108, 1627
MalI GATC 7 cut(s) 347, 447, 618, 737, 1402, 1619, 2070
MbiI CCGCTC 1 cut(s) 1100
MboI GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
MboII GAAGA 5 cut(s) 829, 1269, 1451, 2052, 2055
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 1 cut(s) 2068
MhlI GDGCHC 5 cut(s) 209, 355, 604, 942, 1141
MluCI AATT 8 cut(s) 54, 108, 192, 943, 1142, 1738, 1925, 1962
MlyI GAGTC 2 cut(s) 238, 957
MmeI TCCRAC 1 cut(s) 1378
MroXI GAANNNNTTC 2 cut(s) 108, 1125
MseI TTAA 5 cut(s) 287, 330, 495, 1149, 1416
MslI CAYNNNNRTG 4 cut(s) 384, 486, 819, 1031
MspI CCGG 5 cut(s) 209, 280, 750, 1540, 1655
MspR9I CCNGG 9 cut(s) 209, 239, 280, 414, 598, 1237, 1588, 1655, 1656
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 2 cut(s) 1588, 1862
MvaI CCWGG 5 cut(s) 239, 414, 598, 1237, 1588
MwoI GCNNNNNNNGC 8 cut(s) 418, 631, 725, 1091, 1196, 1333, 1549, 1868
NciI CCSGG 4 cut(s) 209, 280, 1655, 1656
NdeII GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
NheI GCTAGC 1 cut(s) 83
NlaIV GGNNCC 2 cut(s) 1505, 2070
NmeAIII GCCGAG 1 cut(s) 647
NmuCI GTSAC 3 cut(s) 73, 650, 1108
NspI RCATGY 2 cut(s) 369, 456
PciI ACATGT 1 cut(s) 452
PctI GAATGC 2 cut(s) 1588, 1862
PdmI GAANNNNTTC 2 cut(s) 108, 1125
PfeI GAWTC 3 cut(s) 274, 307, 1022
PflFI GACNNNGTC 1 cut(s) 71
PfoI TCCNGGA 1 cut(s) 1235
PkrI GCNGC 8 cut(s) 223, 636, 673, 1198, 1326, 1392, 1639, 1888
PleI GAGTC 2 cut(s) 238, 957
PpsI GAGTC 2 cut(s) 238, 957
PscI ACATGT 1 cut(s) 452
PshAI GACNNNNGTC 2 cut(s) 248, 815
PsiI TTATAA 1 cut(s) 858
Psp124BI GAGCTC 1 cut(s) 942
Psp6I CCWGG 5 cut(s) 237, 412, 596, 1235, 1586
PspFI CCCAGC 1 cut(s) 1987
PspGI CCWGG 5 cut(s) 237, 412, 596, 1235, 1586
PspN4I GGNNCC 2 cut(s) 1505, 2070
PstI CTGCAG 1 cut(s) 1167
PstNI CAGNNNCTG 1 cut(s) 887
PsuI RGATCY 1 cut(s) 2068
PsyI GACNNNGTC 1 cut(s) 71
RsaI GTAC 3 cut(s) 914, 1522, 1565
RsaNI GTAC 3 cut(s) 913, 1521, 1564
RseI CAYNNNNRTG 4 cut(s) 384, 486, 819, 1031
SacI GAGCTC 1 cut(s) 942
SaqAI TTAA 5 cut(s) 287, 330, 495, 1149, 1416
SatI GCNGC 8 cut(s) 222, 635, 672, 1197, 1325, 1391, 1638, 1887
Sau3AI GATC 7 cut(s) 345, 445, 616, 735, 1400, 1617, 2068
SchI GAGTC 2 cut(s) 238, 957
ScrFI CCNGG 9 cut(s) 209, 239, 280, 414, 598, 1237, 1588, 1655, 1656
SduI GDGCHC 5 cut(s) 209, 355, 604, 942, 1141
SfaNI GCATC 3 cut(s) 784, 1208, 1498
SfcI CTRYAG 3 cut(s) 844, 1163, 1577
SmaI CCCGGG 1 cut(s) 1656
SmiMI CAYNNNNRTG 4 cut(s) 384, 486, 819, 1031
SmlI CTYRAG 2 cut(s) 113, 608
SmoI CTYRAG 2 cut(s) 113, 608
SpeI ACTAGT 1 cut(s) 1603
Sse9I AATT 8 cut(s) 54, 108, 192, 943, 1142, 1738, 1925, 1962
SsiI CCGC 4 cut(s) 1098, 1196, 1298, 1334
SstI GAGCTC 1 cut(s) 942
StyD4I CCNGG 9 cut(s) 207, 237, 278, 412, 596, 1235, 1586, 1653, 1654
StyI CCWWGG 1 cut(s) 1283
TaaI ACNGT 8 cut(s) 73, 335, 760, 845, 854, 990, 1627, 1975
TaiI ACGT 1 cut(s) 1746
TaqI TCGA 6 cut(s) 265, 840, 949, 1020, 1766, 2024
TasI AATT 8 cut(s) 54, 108, 192, 943, 1142, 1738, 1925, 1962
TatI WGTACW 1 cut(s) 1563
TauI GCSGC 1 cut(s) 1199
TfiI GAWTC 3 cut(s) 274, 307, 1022
Tru1I TTAA 5 cut(s) 287, 330, 495, 1149, 1416
Tru9I TTAA 5 cut(s) 287, 330, 495, 1149, 1416
TscAI CASTG 5 cut(s) 300, 355, 652, 995, 1113
TseFI GTSAC 3 cut(s) 73, 650, 1108
TseI GCWGC 7 cut(s) 221, 634, 671, 1324, 1390, 1637, 1886
Tsp45I GTSAC 3 cut(s) 73, 650, 1108
TspGWI ACGGA 1 cut(s) 1538
TspMI CCCGGG 1 cut(s) 1654
TspRI CASTG 5 cut(s) 300, 355, 652, 995, 1113
Tth111I GACNNNGTC 1 cut(s) 71
VneI GTGCAC 1 cut(s) 351
XapI RAATTY 2 cut(s) 108, 1962
XceI RCATGY 2 cut(s) 369, 456
XmaI CCCGGG 1 cut(s) 1654
XmaJI CCTAGG 1 cut(s) 1283
XmiI GTMKAC 3 cut(s) 457, 804, 1005
XmnI GAANNNNTTC 2 cut(s) 108, 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.