protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 887 |
| AccB1I | GGYRCC | 1 cut(s) | 144 |
| AccII | CGCG | 1 cut(s) | 803 |
| AciI | CCGC | 5 cut(s) | 28, 281, 495, 527, 755 |
| AclWI | GGATC | 3 cut(s) | 182, 830, 959 |
| AcsI | RAATTY | 2 cut(s) | 152, 556 |
| AcyI | GRCGYC | 1 cut(s) | 266 |
| AfaI | GTAC | 4 cut(s) | 483, 730, 1135, 1433 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 710, 741 |
| AgsI | TTSAA | 6 cut(s) | 19, 52, 415, 775, 856, 971 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1108 |
| AjnI | CCWGG | 4 cut(s) | 147, 706, 921, 1363 |
| Alw26I | GTCTC | 5 cut(s) | 87, 385, 913, 1373, 1385 |
| AlwI | GGATC | 3 cut(s) | 182, 830, 959 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 911 |
| Ama87I | CYCGRG | 1 cut(s) | 1388 |
| AoxI | GGCC | 1 cut(s) | 42 |
| ApeKI | GCWGC | 2 cut(s) | 524, 917 |
| ApoI | RAATTY | 2 cut(s) | 152, 556 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 447 |
| AspLEI | GCGC | 1 cut(s) | 1032 |
| AsuHPI | GGTGA | 2 cut(s) | 259, 1079 |
| AvaI | CYCGRG | 1 cut(s) | 1388 |
| BaeGI | GKGCMC | 1 cut(s) | 147 |
| BanI | GGYRCC | 1 cut(s) | 144 |
| BbsI | GAAGAC | 2 cut(s) | 367, 1104 |
| BbvI | GCAGC | 2 cut(s) | 536, 904 |
| BccI | CCATC | 6 cut(s) | 32, 251, 387, 571, 671, 942 |
| BceAI | ACGGC | 1 cut(s) | 1030 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 781, 815 |
| BciT130I | CCWGG | 4 cut(s) | 149, 708, 923, 1365 |
| BcoDI | GTCTC | 5 cut(s) | 87, 385, 913, 1373, 1385 |
| BfaI | CTAG | 3 cut(s) | 128, 383, 440 |
| BfoI | RGCGCY | 1 cut(s) | 1033 |
| BglII | AGATCT | 1 cut(s) | 777 |
| BisI | GCNGC | 5 cut(s) | 282, 495, 525, 756, 918 |
| BlsI | GCNGC | 5 cut(s) | 283, 496, 526, 757, 919 |
| BmcAI | AGTACT | 2 cut(s) | 483, 730 |
| Bme1390I | CCNGG | 4 cut(s) | 149, 708, 923, 1365 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1108 |
| BmeT110I | CYCGRG | 1 cut(s) | 1388 |
| BmiI | GGNNCC | 2 cut(s) | 146, 976 |
| BmrFI | CCNGG | 4 cut(s) | 149, 708, 923, 1365 |
| BmsI | GCATC | 6 cut(s) | 541, 603, 683, 723, 807, 1032 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1205, 1277 |
| BpiI | GAAGAC | 2 cut(s) | 367, 1104 |
| BpmI | CTGGAG | 1 cut(s) | 1347 |
| BpuEI | CTTGAG | 2 cut(s) | 293, 854 |
| BsaBI | GATNNNNATC | 1 cut(s) | 302 |
| BsaHI | GRCGYC | 1 cut(s) | 266 |
| BsaI | GGTCTC | 1 cut(s) | 1373 |
| BsaJI | CCNNGG | 1 cut(s) | 921 |
| BsaWI | WCCGGW | 1 cut(s) | 515 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 102, 132 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 710, 741 |
| Bse1I | ACTGG | 2 cut(s) | 249, 1311 |
| Bse8I | GATNNNNATC | 1 cut(s) | 302 |
| BseBI | CCWGG | 4 cut(s) | 149, 708, 923, 1365 |
| BseDI | CCNNGG | 1 cut(s) | 921 |
| BseGI | GGATG | 3 cut(s) | 24, 702, 953 |
| BseJI | GATNNNNATC | 1 cut(s) | 302 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 710, 741 |
| BseMII | CTCAG | 1 cut(s) | 225 |
| BseNI | ACTGG | 2 cut(s) | 249, 1311 |
| BseRI | GAGGAG | 1 cut(s) | 1038 |
| BseSI | GKGCMC | 1 cut(s) | 147 |
| BseXI | GCAGC | 2 cut(s) | 536, 904 |
| Bsh1236I | CGCG | 1 cut(s) | 803 |
| BshFI | GGCC | 1 cut(s) | 44 |
| BshNI | GGYRCC | 1 cut(s) | 144 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1388 |
| BsiSI | CCGG | 2 cut(s) | 461, 516 |
| BslFI | GGGAC | 1 cut(s) | 1364 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 710, 741 |
| BsmAI | GTCTC | 5 cut(s) | 87, 385, 913, 1373, 1385 |
| BsmFI | GGGAC | 1 cut(s) | 1364 |
| BsmI | GAATGC | 2 cut(s) | 410, 616 |
| BsnI | GGCC | 1 cut(s) | 44 |
| Bso31I | GGTCTC | 1 cut(s) | 1373 |
| BsoBI | CYCGRG | 1 cut(s) | 1388 |
| Bsp1286I | GDGCHC | 1 cut(s) | 147 |
| Bsp143I | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| BspACI | CCGC | 5 cut(s) | 28, 281, 495, 527, 755 |
| BspANI | GGCC | 1 cut(s) | 44 |
| BspCNI | CTCAG | 1 cut(s) | 224 |
| BspFNI | CGCG | 1 cut(s) | 803 |
| BspLI | GGNNCC | 2 cut(s) | 146, 976 |
| BspPI | GGATC | 3 cut(s) | 182, 830, 959 |
| BspQI | GCTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| BspT107I | GGYRCC | 1 cut(s) | 144 |
| BspTNI | GGTCTC | 1 cut(s) | 1373 |
| BsrI | ACTGG | 2 cut(s) | 249, 1311 |
| BssECI | CCNNGG | 1 cut(s) | 921 |
| BssMI | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| BssNI | GRCGYC | 1 cut(s) | 266 |
| Bst2UI | CCWGG | 4 cut(s) | 149, 708, 923, 1365 |
| Bst4CI | ACNGT | 6 cut(s) | 75, 278, 373, 481, 655, 766 |
| Bst6I | CTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| BstACI | GRCGYC | 1 cut(s) | 266 |
| BstC8I | GCNNGC | 6 cut(s) | 1074, 1146, 1160, 1164, 1218, 1290 |
| BstDEI | CTNAG | 2 cut(s) | 211, 1086 |
| BstF5I | GGATG | 3 cut(s) | 24, 702, 953 |
| BstFNI | CGCG | 1 cut(s) | 803 |
| BstH2I | RGCGCY | 1 cut(s) | 1033 |
| BstHHI | GCGC | 1 cut(s) | 1032 |
| BstKTI | GATC | 9 cut(s) | 177, 300, 535, 780, 825, 954, 1171, 1243, 1315 |
| BstMAI | GTCTC | 5 cut(s) | 87, 385, 913, 1373, 1385 |
| BstMBI | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 923, 1027, 1082, 1091 |
| BstNI | CCWGG | 4 cut(s) | 149, 708, 923, 1365 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1205, 1277 |
| BstSCI | CCNGG | 4 cut(s) | 147, 706, 921, 1363 |
| BstSLI | GKGCMC | 1 cut(s) | 147 |
| BstUI | CGCG | 1 cut(s) | 803 |
| BstV1I | GCAGC | 2 cut(s) | 536, 904 |
| BstV2I | GAAGAC | 2 cut(s) | 367, 1104 |
| BstX2I | RGATCY | 2 cut(s) | 174, 777 |
| BstYI | RGATCY | 2 cut(s) | 174, 777 |
| BsuRI | GGCC | 1 cut(s) | 44 |
| BtgZI | GCGATG | 2 cut(s) | 784, 1055 |
| BtsCI | GGATG | 3 cut(s) | 24, 702, 953 |
| BtsI | GCAGTG | 3 cut(s) | 489, 696, 948 |
| BtsIMutI | CAGTG | 4 cut(s) | 274, 489, 696, 948 |
| Cac8I | GCNNGC | 6 cut(s) | 1074, 1146, 1160, 1164, 1218, 1290 |
| CaiI | CAGNNNCTG | 1 cut(s) | 911 |
| CfoI | GCGC | 1 cut(s) | 1032 |
| CseI | GACGC | 1 cut(s) | 274 |
| Csp6I | GTAC | 4 cut(s) | 482, 729, 1134, 1432 |
| CviAII | CATG | 2 cut(s) | 421, 1018 |
| CviQI | GTAC | 4 cut(s) | 482, 729, 1134, 1432 |
| DdeI | CTNAG | 2 cut(s) | 211, 1086 |
| DpnI | GATC | 9 cut(s) | 176, 299, 534, 779, 824, 953, 1170, 1242, 1314 |
| DpnII | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1108 |
| Eam1104I | CTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1108 |
| EarI | CTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| Eco31I | GGTCTC | 1 cut(s) | 1373 |
| Eco32I | GATATC | 1 cut(s) | 208 |
| Eco88I | CYCGRG | 1 cut(s) | 1388 |
| EcoRI | GAATTC | 1 cut(s) | 152 |
| EcoRII | CCWGG | 4 cut(s) | 147, 706, 921, 1363 |
| EcoRV | GATATC | 1 cut(s) | 208 |
| EcoT22I | ATGCAT | 1 cut(s) | 618 |
| FaeI | CATG | 2 cut(s) | 424, 1021 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 863, 895 |
| FaqI | GGGAC | 1 cut(s) | 1364 |
| FatI | CATG | 2 cut(s) | 420, 1017 |
| Fnu4HI | GCNGC | 5 cut(s) | 282, 495, 525, 756, 918 |
| FokI | GGATG | 3 cut(s) | 11, 709, 960 |
| Fsp4HI | GCNGC | 5 cut(s) | 282, 495, 525, 756, 918 |
| FspBI | CTAG | 3 cut(s) | 128, 383, 440 |
| GlaI | GCGC | 1 cut(s) | 1031 |
| GluI | GCNGC | 5 cut(s) | 282, 495, 525, 756, 918 |
| GsuI | CTGGAG | 1 cut(s) | 1347 |
| HaeII | RGCGCY | 1 cut(s) | 1033 |
| HaeIII | GGCC | 1 cut(s) | 44 |
| HapII | CCGG | 2 cut(s) | 461, 516 |
| HgaI | GACGC | 1 cut(s) | 274 |
| HhaI | GCGC | 1 cut(s) | 1032 |
| Hin1I | GRCGYC | 1 cut(s) | 266 |
| Hin1II | CATG | 2 cut(s) | 424, 1021 |
| Hin6I | GCGC | 1 cut(s) | 1030 |
| HinP1I | GCGC | 1 cut(s) | 1030 |
| HinfI | GANTC | 4 cut(s) | 4, 113, 328, 592 |
| HpaII | CCGG | 2 cut(s) | 461, 516 |
| HphI | GGTGA | 2 cut(s) | 259, 1079 |
| Hpy166II | GTNNAC | 3 cut(s) | 250, 436, 810 |
| Hpy188I | TCNGA | 2 cut(s) | 214, 622 |
| Hpy8I | GTNNAC | 3 cut(s) | 250, 436, 810 |
| Hpy99I | CGWCG | 4 cut(s) | 1124, 1196, 1268, 1340 |
| HpyAV | CCTTC | 3 cut(s) | 192, 342, 965 |
| HpyCH4III | ACNGT | 6 cut(s) | 75, 278, 373, 481, 655, 766 |
| HpyCH4V | TGCA | 8 cut(s) | 124, 239, 274, 524, 554, 616, 631, 674 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 923, 1027, 1082, 1091 |
| HpyF3I | CTNAG | 2 cut(s) | 211, 1086 |
| Hsp92I | GRCGYC | 1 cut(s) | 266 |
| Hsp92II | CATG | 2 cut(s) | 424, 1021 |
| HspAI | GCGC | 1 cut(s) | 1030 |
| Kzo9I | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| LguI | GCTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| Lsp1109I | GCAGC | 2 cut(s) | 536, 904 |
| LweI | GCATC | 6 cut(s) | 541, 603, 683, 723, 807, 1032 |
| MaeI | CTAG | 3 cut(s) | 128, 383, 440 |
| MaeIII | GTNAC | 5 cut(s) | 130, 290, 593, 679, 984 |
| MalI | GATC | 9 cut(s) | 176, 299, 534, 779, 824, 953, 1170, 1242, 1314 |
| MboI | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| MboII | GAAGA | 9 cut(s) | 367, 527, 772, 824, 1070, 1104, 1142, 1214, 1286 |
| MflI | RGATCY | 2 cut(s) | 174, 777 |
| MhlI | GDGCHC | 1 cut(s) | 147 |
| MluCI | AATT | 4 cut(s) | 12, 152, 168, 556 |
| MlyI | GAGTC | 2 cut(s) | 322, 601 |
| Mph1103I | ATGCAT | 1 cut(s) | 618 |
| MroXI | GAANNNNTTC | 1 cut(s) | 447 |
| MseI | TTAA | 1 cut(s) | 575 |
| MslI | CAYNNNNRTG | 1 cut(s) | 817 |
| MspA1I | CMGCKG | 1 cut(s) | 527 |
| MspI | CCGG | 2 cut(s) | 461, 516 |
| MspR9I | CCNGG | 4 cut(s) | 149, 708, 923, 1365 |
| Mva1269I | GAATGC | 2 cut(s) | 410, 616 |
| MvaI | CCWGG | 4 cut(s) | 149, 708, 923, 1365 |
| MvnI | CGCG | 1 cut(s) | 803 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 923, 1027, 1082, 1091 |
| NdeII | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| NlaIII | CATG | 2 cut(s) | 424, 1021 |
| NlaIV | GGNNCC | 2 cut(s) | 146, 976 |
| NmuCI | GTSAC | 2 cut(s) | 130, 593 |
| NsiI | ATGCAT | 1 cut(s) | 618 |
| PciSI | GCTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| PctI | GAATGC | 2 cut(s) | 410, 616 |
| PdmI | GAANNNNTTC | 1 cut(s) | 447 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| PkrI | GCNGC | 5 cut(s) | 283, 496, 526, 757, 919 |
| PleI | GAGTC | 2 cut(s) | 322, 600 |
| PpsI | GAGTC | 2 cut(s) | 322, 600 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1205, 1277 |
| PsiI | TTATAA | 1 cut(s) | 887 |
| Psp6I | CCWGG | 4 cut(s) | 147, 706, 921, 1363 |
| PspGI | CCWGG | 4 cut(s) | 147, 706, 921, 1363 |
| PspN4I | GGNNCC | 2 cut(s) | 146, 976 |
| PstNI | CAGNNNCTG | 1 cut(s) | 911 |
| PsuI | RGATCY | 2 cut(s) | 174, 777 |
| RsaI | GTAC | 4 cut(s) | 483, 730, 1135, 1433 |
| RsaNI | GTAC | 4 cut(s) | 482, 729, 1134, 1432 |
| RseI | CAYNNNNRTG | 1 cut(s) | 817 |
| SapI | GCTCTTC | 4 cut(s) | 1083, 1155, 1227, 1299 |
| SaqAI | TTAA | 1 cut(s) | 575 |
| SatI | GCNGC | 5 cut(s) | 282, 495, 525, 756, 918 |
| Sau3AI | GATC | 9 cut(s) | 174, 297, 532, 777, 822, 951, 1168, 1240, 1312 |
| ScaI | AGTACT | 2 cut(s) | 483, 730 |
| SchI | GAGTC | 2 cut(s) | 322, 601 |
| ScrFI | CCNGG | 4 cut(s) | 149, 708, 923, 1365 |
| SduI | GDGCHC | 1 cut(s) | 147 |
| SfaNI | GCATC | 6 cut(s) | 541, 603, 683, 723, 807, 1032 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 817 |
| SmlI | CTYRAG | 2 cut(s) | 308, 869 |
| SmoI | CTYRAG | 2 cut(s) | 308, 869 |
| Sse9I | AATT | 4 cut(s) | 12, 152, 168, 556 |
| SsiI | CCGC | 5 cut(s) | 28, 281, 495, 527, 755 |
| SspMI | CTAG | 3 cut(s) | 128, 383, 440 |
| StyD4I | CCNGG | 4 cut(s) | 147, 706, 921, 1363 |
| TaaI | ACNGT | 6 cut(s) | 75, 278, 373, 481, 655, 766 |
| TaqI | TCGA | 9 cut(s) | 296, 342, 540, 737, 1051, 1119, 1209, 1281, 1371 |
| TasI | AATT | 4 cut(s) | 12, 152, 168, 556 |
| TatI | WGTACW | 2 cut(s) | 481, 728 |
| TauI | GCSGC | 3 cut(s) | 284, 497, 758 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| Tru1I | TTAA | 1 cut(s) | 575 |
| Tru9I | TTAA | 1 cut(s) | 575 |
| TscAI | CASTG | 4 cut(s) | 281, 496, 696, 948 |
| TseFI | GTSAC | 2 cut(s) | 130, 593 |
| TseI | GCWGC | 2 cut(s) | 524, 917 |
| Tsp45I | GTSAC | 2 cut(s) | 130, 593 |
| TspDTI | ATGAA | 3 cut(s) | 324, 409, 713 |
| TspGWI | ACGGA | 1 cut(s) | 1409 |
| TspRI | CASTG | 4 cut(s) | 281, 496, 696, 948 |
| XapI | RAATTY | 2 cut(s) | 152, 556 |
| XmnI | GAANNNNTTC | 1 cut(s) | 447 |
| XspI | CTAG | 3 cut(s) | 128, 383, 440 |
| ZrmI | AGTACT | 2 cut(s) | 483, 730 |
| Zsp2I | ATGCAT | 1 cut(s) | 618 |