Rroxscaffold_2G00105220

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000496
Physical Location & Seq
Reverse (-)
28644192 .. 28648379
4188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00105220.1

Sequence Viewer

Length: 2016 bp
ATGGATTCTAGACTTTTAGTGGCAATTAAGAGAAATGACATACCCACATTTAGCCGGTTAGTAAAAAAAAACAAAGGAATTCTTGAGCAGAGAGAAGCTGATACTTGGAACACACCGTTACACCTTGTGTCAAAGTTTGGTCATGCTGACATGGCGTCTGAAATTGTCACATCACGCCCTGAAATGGTTGCTGCTGAGAATAAGGACCTGGAGACTCCTGTTCATGAAGCTTGTCAAATAGGGAATGCCGAGATCTTGAAGCTGTTACTAAATGCCAATCCTGGGGCAGCTCATAAGCTTAACACCGAAAAGAAGAGTGCCCTTTTCTTGGCTTGCAGCTATGGCCATGTTGATGCGGTGAATGTCCTCCTGAATGAGCCTGGGATTCTGGATTTGATCGAAGATGGGATTGATCAAACTTGCATCCATGCTGCTGTGTTTGGTGGACACATAGATAGTGAAATTAGTTTTGTTGGTGCAGATGTTGTTAGAGAGTTGTTACGTGTTTGTCCTGGCCTTGCAACTAGGATTGATGAGAATGGAAACTCACCATTGCACTATGCATCTGAAAAAGGACACAGGGAGATAACCTGGGCACTCTTAAGGCTCGATCCAAAACTTGCTCAGCAATACAACAACAATGGTTACACACCGTTGCACTTGGCAACTATAAACTACAGAGCTTCAGTCATTGAAGGATTTGTCTTCATGGCTCCTGCATCTTTTCATTTAGGCACAAAAGATGGAGAGACAGTGTTTCACTTGGCTGTGAGATTTGGCCTATATGATGCTTTAGTTTTCTTGATCCTTGTCTGCAATGGCATGAATCTCTTTGGTTGTCGAGATCGTGATGGAAACACCATCTTACATCTTGCAGTTTCTGGAGCACAACATCAGATAGCAGAGTACCTCCTCAACAAAACACGAGTGGAGATCAACTGTCGAAATTGCAGAGGACACACAGCACTTGACATTCTTGACCAGGCCAAGGACAGTCTAGAAAATCGGCATCTTGCAGCCATATTCATGAAAACAGGAGGTAAAAGGAGCACGGAGTTGTTATCTCAATCAGAAAATGCACGTAGAGTCAATGCAGTGACTATCCTTGACAACATGCCAAAAAGAGCCCAATTTGTTACGAAGCATGAATTGCAGTTGACCACTAAAAATCATGAAATATGTTCTTCCCCTGCATCCAATACCCCATCTAGTTTTTCATCACCCATGTCAAGAAACTCATCTAGTTTTCCGTCACCTCATTCTAGCCGGTCATCTCCTAATCTGCCATCACCGCAGACTAACAACTCATCACCTCAACATCCAGTAAGGGGGGTGTTTGACAATAAAATTCAAATGCCGGAGCCCATGGTGTCTACCATGGTGACACAACACAAACCGCCTAGTGAGAATTTTTACGAACCCCGAAGGAAGCAGCATAAGGCACATAGAGAGGCATTACAAAATGCCAGGAACACTATAATACTAGTTGCCAGTTTGATCGCCACAGTTACTTTTGCCGCTGGTATCAACCCCCCGGGTGGTGTTTATCAGGAGGGACTAATGAAAGGGAAGTCAATTGCAGGCAAAACAACAGCTTTCAAGGTCTTTGCAATAAGCAATCATGTTGCGCTGTTCACATCACTCTCCATAGTTGTTGTTGTTGTCAGTATCATCCCCTATCAGAGAAAGCCATTGACACGACTATTGGTGGTTGCTCACAAGGTCATGTGGGTAGCTGTTGCATTCATGGCAACAAGTTATGTTACAGCAACATGGGTGATCTTGCCACATAGTGAGCGTAAAGAATTGGTGTTTGTAGCTTTATTGGCTGTGAGCATTGGCAGTTTGGGAACGGCTTTTATTGGTCTTAGTGTGATGCTAGTTAATCACTGGCTGAGGAAATCGAAGTGGAGAAAGGAAAGAAGAGAAAGAGGAGAGGCTAATGCAGACCTTGAAATGGGAAGCCAAAATTCAGACATGGAGAGCACATACAATCTGGGATATCACTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

671

Amino Acids

74.17

Weight (kDa)

9.01

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 93 4.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 81 - 152 1.5e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 160 - 227 9.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 253 - 324 5.6e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 280 - 325 6.1e-06 Ankyrin repeats (many copies)
PGG PF13962 484 - 593 5.9e-30 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1373
AciI CCGC 4 cut(s) 356, 1292, 1397, 1518
AclWI GGATC 2 cut(s) 605, 799
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 4 cut(s) 78, 1347, 1408, 1969
AcuI CTGAAG 1 cut(s) 669
AcyI GRCGYC 1 cut(s) 155
AdeI CACNNNGTG 2 cut(s) 127, 1793
AfaI GTAC 1 cut(s) 908
AfiI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 988, 1328, 1538, 1957
AflII CTTAAG 1 cut(s) 601
AflIII ACRYGT 1 cut(s) 502
AgsI TTSAA 5 cut(s) 259, 695, 1352, 1600, 1955
AhdI GACNNNNNGTC 1 cut(s) 154
AhlI ACTAGT 1 cut(s) 1483
AjnI CCWGG 7 cut(s) 207, 280, 379, 511, 590, 981, 1466
Alw21I GWGCWC 3 cut(s) 889, 1052, 1988
Alw26I GTCTC 2 cut(s) 206, 743
AlwI GGATC 2 cut(s) 605, 799
AlwNI CAGNNNCTG 1 cut(s) 881
Ama87I CYCGRG 1 cut(s) 1534
AoxI GGCC 4 cut(s) 343, 514, 778, 984
ApeKI GCWGC 6 cut(s) 191, 287, 336, 431, 1016, 1432
ApoI RAATTY 4 cut(s) 78, 1347, 1408, 1969
AspLEI GCGC 1 cut(s) 1630
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 2 cut(s) 1535, 1536
AsuHPI GGTGA 8 cut(s) 370, 540, 1212, 1245, 1281, 1302, 1393, 1789
AvaI CYCGRG 1 cut(s) 1534
AvaII GGWCC 1 cut(s) 205
BaeGI GKGCMC 2 cut(s) 322, 598
BalI TGGCCA 1 cut(s) 345
BanII GRGCYC 2 cut(s) 1129, 1365
BauI CACGAG 1 cut(s) 924
BbsI GAAGAC 1 cut(s) 697
Bbv12I GWGCWC 3 cut(s) 889, 1052, 1988
BbvCI CCTCAGC 1 cut(s) 1895
BbvI GCAGC 6 cut(s) 178, 299, 348, 418, 1028, 1444
BccI CCATC 6 cut(s) 398, 737, 845, 869, 1213, 1294
BceAI ACGGC 1 cut(s) 1869
BciT130I CCWGG 7 cut(s) 209, 282, 381, 513, 592, 983, 1468
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 2 cut(s) 1535, 1536
BcoDI GTCTC 2 cut(s) 206, 743
BcuI ACTAGT 1 cut(s) 1483
BfaI CTAG 9 cut(s) 9, 525, 998, 1209, 1242, 1263, 1401, 1484, 1880
BfmI CTRYAG 1 cut(s) 676
BfrI CTTAAG 1 cut(s) 601
BglII AGATCT 1 cut(s) 252
BisI GCNGC 7 cut(s) 192, 288, 337, 432, 1017, 1433, 1518
BlpI GCTNAGC 1 cut(s) 624
BlsI GCNGC 7 cut(s) 193, 289, 338, 433, 1018, 1434, 1519
Bme1390I CCNGG 9 cut(s) 209, 282, 381, 513, 592, 983, 1468, 1535, 1536
Bme18I GGWCC 1 cut(s) 205
BmeRI GACNNNNNGTC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 1534
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 714, 1362
BmrFI CCNGG 9 cut(s) 209, 282, 381, 513, 592, 983, 1468, 1535, 1536
BmsI GCATC 8 cut(s) 343, 432, 572, 728, 778, 1018, 1202, 1866
BpiI GAAGAC 1 cut(s) 697
BpmI CTGGAG 2 cut(s) 230, 903
Bpu10I CCTNAGC 1 cut(s) 1895
Bpu1102I GCTNAGC 1 cut(s) 624
BpuEI CTTGAG 1 cut(s) 104
BpuMI CCSGG 2 cut(s) 1535, 1536
BsaAI YACGTR 2 cut(s) 503, 1082
BsaHI GRCGYC 1 cut(s) 155
BsaJI CCNNGG 8 cut(s) 281, 380, 591, 987, 1365, 1377, 1533, 1534
BsaXI ACNNNNNCTCC 2 cut(s) 738, 768
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 282, 328, 988, 1328, 1538, 1957
Bse118I RCCGGY 2 cut(s) 54, 1266
Bse1I ACTGG 3 cut(s) 1322, 1491, 1895
Bse3DI GCAATG 2 cut(s) 551, 823
BseBI CCWGG 7 cut(s) 209, 282, 381, 513, 592, 983, 1468
BseDI CCNNGG 8 cut(s) 281, 380, 591, 987, 1365, 1377, 1533, 1534
BseGI GGATG 4 cut(s) 423, 1193, 1318, 1671
BseLI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 988, 1328, 1538, 1957
BseMI GCAATG 2 cut(s) 551, 823
BseMII CTCAG 3 cut(s) 186, 638, 1886
BseNI ACTGG 3 cut(s) 1322, 1491, 1895
BseRI GAGGAG 2 cut(s) 902, 1947
BseSI GKGCMC 2 cut(s) 322, 598
BseXI GCAGC 6 cut(s) 178, 299, 348, 418, 1028, 1444
BsgI GTGCAG 1 cut(s) 498
BshFI GGCC 4 cut(s) 345, 516, 780, 986
BsiHKAI GWGCWC 3 cut(s) 889, 1052, 1988
BsiHKCI CYCGRG 1 cut(s) 1534
BsiSI CCGG 4 cut(s) 55, 1267, 1358, 1535
BslFI GGGAC 1 cut(s) 1569
BslI CCNNNNNNNGG 7 cut(s) 184, 282, 328, 988, 1328, 1538, 1957
BsmAI GTCTC 2 cut(s) 206, 743
BsmFI GGGAC 1 cut(s) 1569
BsmI GAATGC 2 cut(s) 250, 1742
BsnI GGCC 4 cut(s) 345, 516, 780, 986
BsoBI CYCGRG 1 cut(s) 1534
Bsp1286I GDGCHC 7 cut(s) 322, 598, 889, 1052, 1129, 1365, 1988
Bsp143I GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
Bsp1720I GCTNAGC 1 cut(s) 624
Bsp19I CCATGG 2 cut(s) 1365, 1377
BspACI CCGC 4 cut(s) 356, 1292, 1397, 1518
BspANI GGCC 4 cut(s) 345, 516, 780, 986
BspCNI CTCAG 3 cut(s) 187, 637, 1887
BspHI TCATGA 3 cut(s) 223, 1026, 1171
BspLI GGNNCC 2 cut(s) 714, 1362
BspPI GGATC 2 cut(s) 605, 799
BspTI CTTAAG 1 cut(s) 601
BsrDI GCAATG 2 cut(s) 551, 823
BsrFI RCCGGY 2 cut(s) 54, 1266
BsrI ACTGG 3 cut(s) 1322, 1491, 1895
BssAI RCCGGY 2 cut(s) 54, 1266
BssECI CCNNGG 8 cut(s) 281, 380, 591, 987, 1365, 1377, 1533, 1534
BssMI GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
BssNI GRCGYC 1 cut(s) 155
BssSI CACGAG 1 cut(s) 924
BssT1I CCWWGG 3 cut(s) 987, 1365, 1377
Bst2BI CACGAG 1 cut(s) 924
Bst2UI CCWGG 7 cut(s) 209, 282, 381, 513, 592, 983, 1468
Bst4CI ACNGT 6 cut(s) 117, 654, 754, 941, 995, 1507
Bst6I CTCTTC 2 cut(s) 308, 1918
BstACI GRCGYC 1 cut(s) 155
BstAFI CTTAAG 1 cut(s) 601
BstAPI GCANNNNNTGC 1 cut(s) 1150
BstBAI YACGTR 2 cut(s) 503, 1082
BstC8I GCNNGC 2 cut(s) 334, 1582
BstDEI CTNAG 4 cut(s) 195, 624, 1868, 1895
BstDSI CCRYGG 2 cut(s) 1365, 1377
BstF5I GGATG 4 cut(s) 423, 1193, 1318, 1671
BstHHI GCGC 1 cut(s) 1630
BstKTI GATC 9 cut(s) 255, 399, 415, 613, 807, 847, 936, 1500, 1782
BstMAI GTCTC 2 cut(s) 206, 743
BstMBI GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
BstMWI GCNNNNNNNGC 6 cut(s) 152, 342, 1150, 1291, 1748, 1826
BstNI CCWGG 7 cut(s) 209, 282, 381, 513, 592, 983, 1468
BstNSI RCATGY 1 cut(s) 1117
BstSCI CCNGG 9 cut(s) 207, 280, 379, 511, 590, 981, 1466, 1533, 1534
BstSFI CTRYAG 1 cut(s) 676
BstSLI GKGCMC 2 cut(s) 322, 598
BstV1I GCAGC 6 cut(s) 178, 299, 348, 418, 1028, 1444
BstV2I GAAGAC 1 cut(s) 697
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 4 cut(s) 345, 516, 780, 986
BtgI CCRYGG 2 cut(s) 1365, 1377
BtsCI GGATG 4 cut(s) 423, 1193, 1318, 1671
BtsI GCAGTG 1 cut(s) 1101
BtsIMutI CAGTG 3 cut(s) 759, 1101, 1888
Cac8I GCNNGC 2 cut(s) 334, 1582
CaiI CAGNNNCTG 1 cut(s) 881
CciI TCATGA 3 cut(s) 223, 1026, 1171
CfoI GCGC 1 cut(s) 1630
Cfr10I RCCGGY 2 cut(s) 54, 1266
Cfr13I GGNCC 1 cut(s) 205
Cfr9I CCCGGG 1 cut(s) 1534
CseI GACGC 1 cut(s) 144
Csp6I GTAC 1 cut(s) 907
CviQI GTAC 1 cut(s) 907
DdeI CTNAG 4 cut(s) 195, 624, 1868, 1895
DpnI GATC 9 cut(s) 254, 398, 414, 612, 806, 846, 935, 1499, 1781
DpnII GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
DraIII CACNNNGTG 2 cut(s) 127, 1793
DriI GACNNNNNGTC 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 2 cut(s) 308, 1918
Eam1105I GACNNNNNGTC 1 cut(s) 154
EarI CTCTTC 2 cut(s) 308, 1918
Eco130I CCWWGG 3 cut(s) 987, 1365, 1377
Eco24I GRGCYC 2 cut(s) 1129, 1365
Eco32I GATATC 1 cut(s) 2003
Eco47I GGWCC 1 cut(s) 205
Eco57I CTGAAG 1 cut(s) 669
Eco88I CYCGRG 1 cut(s) 1534
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 78
EcoRII CCWGG 7 cut(s) 207, 280, 379, 511, 590, 981, 1466
EcoRV GATATC 1 cut(s) 2003
EcoT14I CCWWGG 3 cut(s) 987, 1365, 1377
EcoT22I ATGCAT 1 cut(s) 565
EcoT38I GRGCYC 2 cut(s) 1129, 1365
ErhI CCWWGG 3 cut(s) 987, 1365, 1377
FalI AAGNNNNNCTT 2 cut(s) 66, 98
FaqI GGGAC 1 cut(s) 1569
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 1373
Fnu4HI GCNGC 7 cut(s) 192, 288, 337, 432, 1017, 1433, 1518
FokI GGATG 4 cut(s) 410, 1180, 1305, 1658
FriOI GRGCYC 2 cut(s) 1129, 1365
Fsp4HI GCNGC 7 cut(s) 192, 288, 337, 432, 1017, 1433, 1518
FspBI CTAG 9 cut(s) 9, 525, 998, 1209, 1242, 1263, 1401, 1484, 1880
GlaI GCGC 1 cut(s) 1629
GluI GCNGC 7 cut(s) 192, 288, 337, 432, 1017, 1433, 1518
GsuI CTGGAG 2 cut(s) 230, 903
HaeIII GGCC 4 cut(s) 345, 516, 780, 986
HapII CCGG 4 cut(s) 55, 1267, 1358, 1535
HgaI GACGC 1 cut(s) 144
HhaI GCGC 1 cut(s) 1630
Hin1I GRCGYC 1 cut(s) 155
Hin6I GCGC 1 cut(s) 1628
HinP1I GCGC 1 cut(s) 1628
HincII GTYRAC 1 cut(s) 1158
HindII GTYRAC 1 cut(s) 1158
HindIII AAGCTT 2 cut(s) 228, 296
HinfI GANTC 5 cut(s) 5, 214, 385, 826, 1086
HpaII CCGG 4 cut(s) 55, 1267, 1358, 1535
HphI GGTGA 8 cut(s) 370, 540, 1212, 1245, 1281, 1302, 1393, 1789
Hpy166II GTNNAC 4 cut(s) 446, 1158, 1374, 1635
Hpy188I TCNGA 6 cut(s) 160, 568, 897, 1072, 1683, 1975
Hpy8I GTNNAC 4 cut(s) 446, 1158, 1374, 1635
HpyAV CCTTC 2 cut(s) 689, 1419
HpyCH4III ACNGT 6 cut(s) 117, 654, 754, 941, 995, 1507
HpyCH4IV ACGT 2 cut(s) 502, 1081
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 342, 1150, 1291, 1748, 1826
HpyF3I CTNAG 4 cut(s) 195, 624, 1868, 1895
HpySE526I ACGT 2 cut(s) 502, 1081
Hsp92I GRCGYC 1 cut(s) 155
HspAI GCGC 1 cut(s) 1628
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
LmnI GCTCC 4 cut(s) 718, 884, 1047, 1360
Lsp1109I GCAGC 6 cut(s) 178, 299, 348, 418, 1028, 1444
LweI GCATC 8 cut(s) 343, 432, 572, 728, 778, 1018, 1202, 1866
MaeI CTAG 9 cut(s) 9, 525, 998, 1209, 1242, 1263, 1401, 1484, 1880
MaeII ACGT 2 cut(s) 502, 1081
MalI GATC 9 cut(s) 254, 398, 414, 612, 806, 846, 935, 1499, 1781
MboI GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
MboII GAAGA 5 cut(s) 325, 413, 697, 1176, 1935
MfeI CAATTG 1 cut(s) 1575
MflI RGATCY 1 cut(s) 252
MhlI GDGCHC 7 cut(s) 322, 598, 889, 1052, 1129, 1365, 1988
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 2 cut(s) 208, 1095
Mox20I TGGCCA 1 cut(s) 345
Mph1103I ATGCAT 1 cut(s) 565
MscI TGGCCA 1 cut(s) 345
MseI TTAA 4 cut(s) 27, 300, 602, 1884
MslI CAYNNNNRTG 2 cut(s) 351, 1025
Msp20I TGGCCA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 1520
MspCI CTTAAG 1 cut(s) 601
MspI CCGG 4 cut(s) 55, 1267, 1358, 1535
MspR9I CCNGG 9 cut(s) 209, 282, 381, 513, 592, 983, 1468, 1535, 1536
MunI CAATTG 1 cut(s) 1575
Mva1269I GAATGC 2 cut(s) 250, 1742
MvaI CCWGG 7 cut(s) 209, 282, 381, 513, 592, 983, 1468
MwoI GCNNNNNNNGC 6 cut(s) 152, 342, 1150, 1291, 1748, 1826
NciI CCSGG 2 cut(s) 1535, 1536
NcoI CCATGG 2 cut(s) 1365, 1377
NdeII GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
NlaIV GGNNCC 2 cut(s) 714, 1362
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 4 cut(s) 166, 1096, 1251, 1381
NsiI ATGCAT 1 cut(s) 565
NspI RCATGY 1 cut(s) 1117
PagI TCATGA 3 cut(s) 223, 1026, 1171
PctI GAATGC 2 cut(s) 250, 1742
PfeI GAWTC 3 cut(s) 5, 385, 826
PkrI GCNGC 7 cut(s) 193, 289, 338, 433, 1018, 1434, 1519
PleI GAGTC 2 cut(s) 208, 1094
PpsI GAGTC 2 cut(s) 208, 1094
Ppu21I YACGTR 2 cut(s) 503, 1082
PpuMI RGGWCCY 1 cut(s) 205
Psp5II RGGWCCY 1 cut(s) 205
Psp6I CCWGG 7 cut(s) 207, 280, 379, 511, 590, 981, 1466
PspGI CCWGG 7 cut(s) 207, 280, 379, 511, 590, 981, 1466
PspN4I GGNNCC 2 cut(s) 714, 1362
PspPI GGNCC 1 cut(s) 205
PspPPI RGGWCCY 1 cut(s) 205
PstNI CAGNNNCTG 1 cut(s) 881
PsuI RGATCY 1 cut(s) 252
RsaI GTAC 1 cut(s) 908
RsaNI GTAC 1 cut(s) 907
RseI CAYNNNNRTG 2 cut(s) 351, 1025
SaqAI TTAA 4 cut(s) 27, 300, 602, 1884
SatI GCNGC 7 cut(s) 192, 288, 337, 432, 1017, 1433, 1518
Sau3AI GATC 9 cut(s) 252, 396, 412, 610, 804, 844, 933, 1497, 1779
Sau96I GGNCC 1 cut(s) 205
SchI GAGTC 2 cut(s) 208, 1095
ScrFI CCNGG 9 cut(s) 209, 282, 381, 513, 592, 983, 1468, 1535, 1536
SduI GDGCHC 7 cut(s) 322, 598, 889, 1052, 1129, 1365, 1988
SfaNI GCATC 8 cut(s) 343, 432, 572, 728, 778, 1018, 1202, 1866
SfcI CTRYAG 1 cut(s) 676
SinI GGWCC 1 cut(s) 205
SmaI CCCGGG 1 cut(s) 1536
SmiMI CAYNNNNRTG 2 cut(s) 351, 1025
SmlI CTYRAG 2 cut(s) 83, 601
SmoI CTYRAG 2 cut(s) 83, 601
SpeI ACTAGT 1 cut(s) 1483
SsiI CCGC 4 cut(s) 356, 1292, 1397, 1518
SspMI CTAG 9 cut(s) 9, 525, 998, 1209, 1242, 1263, 1401, 1484, 1880
StyD4I CCNGG 9 cut(s) 207, 280, 379, 511, 590, 981, 1466, 1533, 1534
StyI CCWWGG 3 cut(s) 987, 1365, 1377
TaaI ACNGT 6 cut(s) 117, 654, 754, 941, 995, 1507
TaiI ACGT 2 cut(s) 505, 1084
TaqI TCGA 5 cut(s) 399, 609, 841, 943, 1904
TauI GCSGC 1 cut(s) 1520
TfiI GAWTC 3 cut(s) 5, 385, 826
Tru1I TTAA 4 cut(s) 27, 300, 602, 1884
Tru9I TTAA 4 cut(s) 27, 300, 602, 1884
TscAI CASTG 3 cut(s) 759, 1101, 1895
TseFI GTSAC 4 cut(s) 166, 1096, 1251, 1381
TseI GCWGC 6 cut(s) 191, 287, 336, 431, 1016, 1432
Tsp45I GTSAC 4 cut(s) 166, 1096, 1251, 1381
TspGWI ACGGA 2 cut(s) 1067, 1239
TspMI CCCGGG 1 cut(s) 1534
TspRI CASTG 3 cut(s) 759, 1101, 1895
Vha464I CTTAAG 1 cut(s) 601
VpaK11BI GGWCC 1 cut(s) 205
XapI RAATTY 4 cut(s) 78, 1347, 1408, 1969
XbaI TCTAGA 2 cut(s) 8, 997
XceI RCATGY 1 cut(s) 1117
XmaI CCCGGG 1 cut(s) 1534
XmiI GTMKAC 1 cut(s) 1373
XspI CTAG 9 cut(s) 9, 525, 998, 1209, 1242, 1263, 1401, 1484, 1880
Zsp2I ATGCAT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.