Rh2CG395900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000496
Physical Location & Seq
Forward (+)
53816385 .. 53819427
3043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG395900.1

Sequence Viewer

Length: 1989 bp
ATGGATTCTAGACTTTTAGTGGCAATTAAGAGAAATGACCTACCCACATTTAGCCGGTTAGTAAAAAAAAACAAAGGAATTCTTGAGCAGAGAGAAGCTGATACTTGGAACACACCGTTACACCTTGTGTCAAAGTTTGGTCATGCTGACATGGTGTCTGAAATTGTCACGTCACGCCCTGAAATGGTTGCTGCTGAGAATAAGGGCCTGGAGACTCCTGTTCATGAAGCTTGTCAAATAGGGAATGCCGAGATCTTGAAGCTGTTACTAAATGCCAATCCTGGGGCAGCTCATAAGCTTAACACCGAAAAGAAGAGTGCCCTTTTCTTGGCTTGCAGCTATGGCCATGTTGATGCGGTGAATGTCCTCCTGAATGAGCCTGGGATGCTGGATTTGATCGAAGATGGGATTGATCAAACTTGCATCCATGCTGCTGTGTTAGGTGGACACATAGATGTTGTTAGAGAGTTGTTACGTGTTTGTCCTGGCCTTGCAACTAGGATTGATGAGAATGGAAACTCAACATTGCACTATGCATCTGAAAAAGGACACAGGGAGATAACCTGGGCACTCTTAAGGCTCGATCCAAAACTTGCTCAGCAATACAATAACAATGGTTACACACCGTTGCACTTGGCAACGATAAACTACAGAGCTTCAGTCATTGAAGGATTTGTCTTCATGGCTCCTGCATCTTTTCATTTAGGCACAAAAGATGGAGAGACAGTGTTTCACTTGGCTGTGAGATTTGGCCTATATGATGCTTTAGTTTTCTTGATCCTTGTCTGCAATGGCATGAATCTCTTTGGTTGTCGAGATCGTGATGGAAACACCATCTTACATCTTGCAGTTTCTGGAGCACAACATCAGATAGCAGAGTACCTCCTCAACAAAACACGAGTGGAGATCAACTGTCGAAATTGCAGAGGACACACAGCACTTGACATTCTTGACCAGGCCAAGGACAGTCTAGAAAATAGGCATCTTGCAGCCATATTCATGAAAGCAGGAGGTAAAAGGAGCACGGAGTTGTTATCTCAATCAGAAAATGCAGGTAGAGTCAATGCAGTGACTCTCCTTGACAACATGCCAAAAAGAGCCCAATTTGTTACAAAGCATGAATTGCAGTTGACCACTAAAAATCATGAAATATGTTCTTCCCCTGCATCCAATTCCCCATCTAGTTTTTCATCACCCATGTCAAGAAACTCATCTAGTTTTCCATCACCTCATTCTAGCCGGTCATCGCCTAATCTGCCATCACCGCAGACTAACAACTCATCGCCTCAACATCCAGTAAGGGGGGTGTTTGACAATAAAATTCAAATGCCGGAGCCCATGGTGACACAACACAAGCCTCCTAGTGAGAATTTTTACGAACCCCCCCGAAGGAAGCAGCATAAGGCACATAGAGAGGCATTACAAAATGCCAGGAACACTATAATACTAGTTGCCAGTTTGATCGCCACAGTTACTTTTGCCGCTGGTATCAACCCCCCGGGTGGTGTTTATCAGGAGGGACTAATGAAAGGGAAGTCAATTGCAGGCAAAACAACAGCTTTCAAGGTCTTTGCAATAAGCAATCATGTTGCGCTGTTCACATCACTCTCCATAGTTGTTGTTGTTGTCAGTATCATCCCCTATCAGAGAAAGCCATTGACACGACTATTGGTGGTTGCTCACAAGGTCATGTGGGTAGCTGTTGCATTCATGGCAACAAGTTATGTTACAGCAACATGGGTGATCTTGCCACATAGTGAGAGTACAGAATTGGTGTTTGTAGCTTTATTGGCTGTGAGCATTGGCAGTTTGGGAACGGCTTTTATTGGTCTTAGTGTGATGCTAGTTAATCACTGGCTGAGGAAATCGAAGTGGAGAAAGGAAAGAAGAGAAAGAAGAGAAAGAGGAGAGGCTAATGCAGACCTTGAAATGGGAAGCCAAAATTCAGACATGGAGAGCACATACGGTCAGGGATATCACTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

662

Amino Acids

73.06

Weight (kDa)

9.08

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 93 2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 71 - 125 2.7e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 138 - 193 3.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 142 - 218 3.3e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 176 - 263 1.5e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 244 - 315 5.6e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 271 - 316 6.1e-06 Ankyrin repeats (many copies)
PGG PF13962 472 - 581 5.8e-30 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000496)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10340 AT1G10340 AT1G34046 AT1G34050 AT2G24600 AT2G24600 AT2G24600 AT2G24600 AT3G52830 AT5G54700 AT5G54700
fragaria_vesca FvH4_6g32091 FvH4_6g32100 FvH4_6g32100 FvH4_6g32121
malus_domestica MD17G1186800.v1.1 MD17G1187000.v1.1
prunus_persica Prupe.3G061900_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062300_v2.0.a1 Prupe.3G062400_v2.0.a1 Prupe.3G065300_v2.0.a1
pyrus_communis pycom17g19590
rosa_chinensis RchiOBHm_Chr1g0353591 RchiOBHm_Chr2g0139761 RchiOBHm_Chr2g0139771 RchiOBHm_Chr2g0139841 RchiOBHm_Chr2g0139851 RchiOBHm_Chr2g0139911
rosa_laevigata RLG00000019831 RLG00000019832 RLG00000019834 RLG00000019835 RLG00000019838 RLG00000028268 RLG00000029493 RLG00000029500 RLG00000029519 RLG00000029774
rosa_multiflora Rmu_co8197386.1_g000001 Rmu_co8359109.1_g000001 Rmu_sc0000545.1_g000005 Rmu_sc0005914.1_g000001 Rmu_sc0030896.1_g000002 Rmu_sc0030896.1_g000003 Rmu_sc0030896.1_g000004 Rmu_sc0032265.1_g000001
rosa_roxburghii Rroxscaffold_2G00105170 Rroxscaffold_2G00105210 Rroxscaffold_2G00105220 Rroxscaffold_4G00301800
rosa_rugosa Rorug01G0236400 Rorug02G0359900 Rorug02G0360000 Rorug02G0360200
rosa_samantha Rh1AG248700 Rh1BG105500 Rh1BG219100 Rh1CG231800 Rh1DG245500 Rh2AG409600 Rh2AG409700 Rh2AG410000 Rh2AG410100 Rh2AG410400 Rh2AG410500 Rh2BG420100 Rh2BG420200 Rh2BG420600 Rh2BG420700 Rh2CG395900 Rh2CG396000 Rh2CG396200 Rh2CG396500 Rh2CG396600 Rh2DG429400 Rh2DG429500 Rh2DG429800 Rh2DG430100 Rh2DG430200
rosa_wichuraiana Rw1G021690 Rw2G033350 Rw2G033400 Rw2G033410 Rw2G033570 Rw2G033620 Rw2G033630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1043
AciI CCGC 3 cut(s) 356, 1265, 1482
AclWI GGATC 2 cut(s) 578, 772
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 4 cut(s) 78, 1320, 1369, 1942
AcuI CTGAAG 1 cut(s) 642
AdeI CACNNNGTG 2 cut(s) 127, 1757
AfaI GTAC 2 cut(s) 881, 1765
AfiI CCNNNNNNNGG 8 cut(s) 184, 282, 328, 961, 1301, 1389, 1502, 1930
AflII CTTAAG 1 cut(s) 574
AflIII ACRYGT 1 cut(s) 475
AgsI TTSAA 5 cut(s) 259, 668, 1325, 1564, 1928
AhdI GACNNNNNGTC 1 cut(s) 154
AhlI ACTAGT 1 cut(s) 1447
AjiI CACGTC 1 cut(s) 171
AjnI CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1430
Alw21I GWGCWC 3 cut(s) 862, 1025, 1961
Alw26I GTCTC 2 cut(s) 206, 716
AlwI GGATC 2 cut(s) 578, 772
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 1498
AoxI GGCC 5 cut(s) 205, 343, 487, 751, 957
ApeKI GCWGC 6 cut(s) 191, 287, 336, 431, 989, 1396
ApoI RAATTY 4 cut(s) 78, 1320, 1369, 1942
AspLEI GCGC 1 cut(s) 1594
AspS9I GGNCC 1 cut(s) 205
AsuC2I CCSGG 2 cut(s) 1499, 1500
AsuHPI GGTGA 6 cut(s) 370, 1185, 1218, 1254, 1354, 1753
AvaI CYCGRG 1 cut(s) 1498
BaeGI GKGCMC 2 cut(s) 322, 571
BalI TGGCCA 1 cut(s) 345
BanII GRGCYC 2 cut(s) 1102, 1338
BauI CACGAG 1 cut(s) 897
BbsI GAAGAC 1 cut(s) 670
Bbv12I GWGCWC 3 cut(s) 862, 1025, 1961
BbvCI CCTCAGC 1 cut(s) 1859
BbvI GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1408
BccI CCATC 7 cut(s) 398, 710, 818, 842, 1186, 1231, 1267
BceAI ACGGC 1 cut(s) 1833
BciT130I CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1432
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 2 cut(s) 1499, 1500
BcoDI GTCTC 2 cut(s) 206, 716
BcuI ACTAGT 1 cut(s) 1447
BfaI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1236, 1362, 1448, 1844
BfmI CTRYAG 1 cut(s) 649
BfrI CTTAAG 1 cut(s) 574
BfuAI ACCTGC 1 cut(s) 1043
BglII AGATCT 1 cut(s) 252
BisI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1397, 1482
BlpI GCTNAGC 1 cut(s) 597
BlsI GCNGC 7 cut(s) 193, 289, 338, 433, 991, 1398, 1483
Bme1390I CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1432, 1499, 1500
BmeRI GACNNNNNGTC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 1498
BmgBI CACGTC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 687, 1335
BmrFI CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1432, 1499, 1500
BmsI GCATC 9 cut(s) 343, 375, 432, 545, 701, 751, 991, 1175, 1830
BpiI GAAGAC 1 cut(s) 670
BpmI CTGGAG 2 cut(s) 230, 876
Bpu10I CCTNAGC 1 cut(s) 1859
Bpu1102I GCTNAGC 1 cut(s) 597
BpuEI CTTGAG 1 cut(s) 104
BpuMI CCSGG 2 cut(s) 1499, 1500
BsaAI YACGTR 1 cut(s) 476
BsaJI CCNNGG 7 cut(s) 281, 380, 564, 960, 1338, 1497, 1498
BsaXI ACNNNNNCTCC 2 cut(s) 711, 741
Bsc4I CCNNNNNNNGG 8 cut(s) 184, 282, 328, 961, 1301, 1389, 1502, 1930
Bse118I RCCGGY 2 cut(s) 54, 1239
Bse1I ACTGG 3 cut(s) 1295, 1455, 1859
Bse3DI GCAATG 2 cut(s) 524, 796
BseBI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1432
BseDI CCNNGG 7 cut(s) 281, 380, 564, 960, 1338, 1497, 1498
BseGI GGATG 5 cut(s) 390, 423, 1166, 1291, 1635
BseLI CCNNNNNNNGG 8 cut(s) 184, 282, 328, 961, 1301, 1389, 1502, 1930
BseMI GCAATG 2 cut(s) 524, 796
BseMII CTCAG 3 cut(s) 186, 611, 1850
BseNI ACTGG 3 cut(s) 1295, 1455, 1859
BseRI GAGGAG 2 cut(s) 875, 1920
BseSI GKGCMC 2 cut(s) 322, 571
BseXI GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1408
BshFI GGCC 5 cut(s) 207, 345, 489, 753, 959
BsiHKAI GWGCWC 3 cut(s) 862, 1025, 1961
BsiHKCI CYCGRG 1 cut(s) 1498
BsiSI CCGG 4 cut(s) 55, 1240, 1331, 1499
BslFI GGGAC 1 cut(s) 1533
BslI CCNNNNNNNGG 8 cut(s) 184, 282, 328, 961, 1301, 1389, 1502, 1930
BsmAI GTCTC 2 cut(s) 206, 716
BsmFI GGGAC 1 cut(s) 1533
BsmI GAATGC 2 cut(s) 250, 1706
BsnI GGCC 5 cut(s) 207, 345, 489, 753, 959
BsoBI CYCGRG 1 cut(s) 1498
Bsp1286I GDGCHC 7 cut(s) 322, 571, 862, 1025, 1102, 1338, 1961
Bsp143I GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
Bsp1720I GCTNAGC 1 cut(s) 597
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 3 cut(s) 356, 1265, 1482
BspANI GGCC 5 cut(s) 207, 345, 489, 753, 959
BspCNI CTCAG 3 cut(s) 187, 610, 1851
BspHI TCATGA 3 cut(s) 223, 999, 1144
BspLI GGNNCC 2 cut(s) 687, 1335
BspMI ACCTGC 1 cut(s) 1043
BspPI GGATC 2 cut(s) 578, 772
BspTI CTTAAG 1 cut(s) 574
BsrDI GCAATG 2 cut(s) 524, 796
BsrFI RCCGGY 2 cut(s) 54, 1239
BsrI ACTGG 3 cut(s) 1295, 1455, 1859
BssAI RCCGGY 2 cut(s) 54, 1239
BssECI CCNNGG 7 cut(s) 281, 380, 564, 960, 1338, 1497, 1498
BssMI GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
BssSI CACGAG 1 cut(s) 897
BssT1I CCWWGG 2 cut(s) 960, 1338
Bst2BI CACGAG 1 cut(s) 897
Bst2UI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1432
Bst4CI ACNGT 7 cut(s) 117, 627, 727, 914, 968, 1471, 1967
Bst6I CTCTTC 3 cut(s) 308, 1882, 1891
BstAFI CTTAAG 1 cut(s) 574
BstAPI GCANNNNNTGC 1 cut(s) 1123
BstBAI YACGTR 1 cut(s) 476
BstC8I GCNNGC 2 cut(s) 334, 1546
BstDEI CTNAG 4 cut(s) 195, 597, 1832, 1859
BstDSI CCRYGG 1 cut(s) 1338
BstF5I GGATG 5 cut(s) 390, 423, 1166, 1291, 1635
BstHHI GCGC 1 cut(s) 1594
BstKTI GATC 9 cut(s) 255, 399, 415, 586, 780, 820, 909, 1464, 1746
BstMAI GTCTC 2 cut(s) 206, 716
BstMBI GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
BstMWI GCNNNNNNNGC 7 cut(s) 342, 385, 1123, 1255, 1264, 1712, 1790
BstNI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1432
BstNSI RCATGY 1 cut(s) 1090
BstSCI CCNGG 9 cut(s) 207, 280, 379, 484, 563, 954, 1430, 1497, 1498
BstSFI CTRYAG 1 cut(s) 649
BstSLI GKGCMC 2 cut(s) 322, 571
BstV1I GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1408
BstV2I GAAGAC 1 cut(s) 670
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 5 cut(s) 207, 345, 489, 753, 959
BtgI CCRYGG 1 cut(s) 1338
BtgZI GCGATG 2 cut(s) 1230, 1266
BtrI CACGTC 1 cut(s) 171
BtsCI GGATG 5 cut(s) 390, 423, 1166, 1291, 1635
BtsI GCAGTG 1 cut(s) 1074
BtsIMutI CAGTG 3 cut(s) 732, 1074, 1852
BveI ACCTGC 1 cut(s) 1043
Cac8I GCNNGC 2 cut(s) 334, 1546
CaiI CAGNNNCTG 1 cut(s) 854
CciI TCATGA 3 cut(s) 223, 999, 1144
CfoI GCGC 1 cut(s) 1594
Cfr10I RCCGGY 2 cut(s) 54, 1239
Cfr13I GGNCC 1 cut(s) 205
Cfr9I CCCGGG 1 cut(s) 1498
Csp6I GTAC 2 cut(s) 880, 1764
CviQI GTAC 2 cut(s) 880, 1764
DdeI CTNAG 4 cut(s) 195, 597, 1832, 1859
DpnI GATC 9 cut(s) 254, 398, 414, 585, 779, 819, 908, 1463, 1745
DpnII GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
DraIII CACNNNGTG 2 cut(s) 127, 1757
DriI GACNNNNNGTC 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 3 cut(s) 308, 1882, 1891
Eam1105I GACNNNNNGTC 1 cut(s) 154
EarI CTCTTC 3 cut(s) 308, 1882, 1891
Eco130I CCWWGG 2 cut(s) 960, 1338
Eco24I GRGCYC 2 cut(s) 1102, 1338
Eco32I GATATC 1 cut(s) 1976
Eco57I CTGAAG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 1498
EcoO109I RGGNCCY 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 78
EcoRII CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1430
EcoRV GATATC 1 cut(s) 1976
EcoT14I CCWWGG 2 cut(s) 960, 1338
EcoT22I ATGCAT 1 cut(s) 538
EcoT38I GRGCYC 2 cut(s) 1102, 1338
ErhI CCWWGG 2 cut(s) 960, 1338
FalI AAGNNNNNCTT 2 cut(s) 66, 98
FaqI GGGAC 1 cut(s) 1533
FbaI TGATCA 1 cut(s) 412
Fnu4HI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1397, 1482
FokI GGATG 5 cut(s) 397, 410, 1153, 1278, 1622
FriOI GRGCYC 2 cut(s) 1102, 1338
Fsp4HI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1397, 1482
FspBI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1236, 1362, 1448, 1844
GlaI GCGC 1 cut(s) 1593
GluI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1397, 1482
GsuI CTGGAG 2 cut(s) 230, 876
HaeIII GGCC 5 cut(s) 207, 345, 489, 753, 959
HapII CCGG 4 cut(s) 55, 1240, 1331, 1499
HhaI GCGC 1 cut(s) 1594
Hin6I GCGC 1 cut(s) 1592
HinP1I GCGC 1 cut(s) 1592
HincII GTYRAC 1 cut(s) 1131
HindII GTYRAC 1 cut(s) 1131
HindIII AAGCTT 2 cut(s) 228, 296
HinfI GANTC 5 cut(s) 5, 214, 799, 1059, 1072
HpaII CCGG 4 cut(s) 55, 1240, 1331, 1499
HphI GGTGA 6 cut(s) 370, 1185, 1218, 1254, 1354, 1753
Hpy166II GTNNAC 3 cut(s) 446, 1131, 1599
Hpy188I TCNGA 6 cut(s) 160, 541, 870, 1045, 1647, 1948
Hpy8I GTNNAC 3 cut(s) 446, 1131, 1599
HpyAV CCTTC 2 cut(s) 662, 1383
HpyCH4III ACNGT 7 cut(s) 117, 627, 727, 914, 968, 1471, 1967
HpyCH4IV ACGT 2 cut(s) 170, 475
HpyF10VI GCNNNNNNNGC 7 cut(s) 342, 385, 1123, 1255, 1264, 1712, 1790
HpyF3I CTNAG 4 cut(s) 195, 597, 1832, 1859
HpySE526I ACGT 2 cut(s) 170, 475
HspAI GCGC 1 cut(s) 1592
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
LmnI GCTCC 4 cut(s) 691, 857, 1020, 1333
Lsp1109I GCAGC 6 cut(s) 178, 299, 348, 418, 1001, 1408
LweI GCATC 9 cut(s) 343, 375, 432, 545, 701, 751, 991, 1175, 1830
MaeI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1236, 1362, 1448, 1844
MaeII ACGT 2 cut(s) 170, 475
MalI GATC 9 cut(s) 254, 398, 414, 585, 779, 819, 908, 1463, 1745
MboI GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
MboII GAAGA 6 cut(s) 325, 413, 670, 1149, 1899, 1908
MfeI CAATTG 1 cut(s) 1539
MflI RGATCY 1 cut(s) 252
MhlI GDGCHC 7 cut(s) 322, 571, 862, 1025, 1102, 1338, 1961
MlsI TGGCCA 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 345
MlyI GAGTC 3 cut(s) 208, 1066, 1068
Mox20I TGGCCA 1 cut(s) 345
Mph1103I ATGCAT 1 cut(s) 538
MscI TGGCCA 1 cut(s) 345
MseI TTAA 4 cut(s) 27, 300, 575, 1848
MslI CAYNNNNRTG 3 cut(s) 351, 453, 998
Msp20I TGGCCA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 1484
MspCI CTTAAG 1 cut(s) 574
MspI CCGG 4 cut(s) 55, 1240, 1331, 1499
MspR9I CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1432, 1499, 1500
MunI CAATTG 1 cut(s) 1539
Mva1269I GAATGC 2 cut(s) 250, 1706
MvaI CCWGG 7 cut(s) 209, 282, 381, 486, 565, 956, 1432
MwoI GCNNNNNNNGC 7 cut(s) 342, 385, 1123, 1255, 1264, 1712, 1790
NciI CCSGG 2 cut(s) 1499, 1500
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
NlaIV GGNNCC 2 cut(s) 687, 1335
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 4 cut(s) 166, 171, 1069, 1342
NsiI ATGCAT 1 cut(s) 538
NspI RCATGY 1 cut(s) 1090
PagI TCATGA 3 cut(s) 223, 999, 1144
PctI GAATGC 2 cut(s) 250, 1706
PfeI GAWTC 2 cut(s) 5, 799
PkrI GCNGC 7 cut(s) 193, 289, 338, 433, 991, 1398, 1483
PleI GAGTC 3 cut(s) 208, 1066, 1067
PpsI GAGTC 3 cut(s) 208, 1066, 1067
Ppu21I YACGTR 1 cut(s) 476
Psp6I CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1430
PspGI CCWGG 7 cut(s) 207, 280, 379, 484, 563, 954, 1430
PspN4I GGNNCC 2 cut(s) 687, 1335
PspPI GGNCC 1 cut(s) 205
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 252
RsaI GTAC 2 cut(s) 881, 1765
RsaNI GTAC 2 cut(s) 880, 1764
RseI CAYNNNNRTG 3 cut(s) 351, 453, 998
SaqAI TTAA 4 cut(s) 27, 300, 575, 1848
SatI GCNGC 7 cut(s) 192, 288, 337, 432, 990, 1397, 1482
Sau3AI GATC 9 cut(s) 252, 396, 412, 583, 777, 817, 906, 1461, 1743
Sau96I GGNCC 1 cut(s) 205
SchI GAGTC 3 cut(s) 208, 1066, 1068
ScrFI CCNGG 9 cut(s) 209, 282, 381, 486, 565, 956, 1432, 1499, 1500
SduI GDGCHC 7 cut(s) 322, 571, 862, 1025, 1102, 1338, 1961
SfaNI GCATC 9 cut(s) 343, 375, 432, 545, 701, 751, 991, 1175, 1830
SfcI CTRYAG 1 cut(s) 649
SmaI CCCGGG 1 cut(s) 1500
SmiMI CAYNNNNRTG 3 cut(s) 351, 453, 998
SmlI CTYRAG 2 cut(s) 83, 574
SmoI CTYRAG 2 cut(s) 83, 574
SpeI ACTAGT 1 cut(s) 1447
SsiI CCGC 3 cut(s) 356, 1265, 1482
SspMI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1236, 1362, 1448, 1844
StyD4I CCNGG 9 cut(s) 207, 280, 379, 484, 563, 954, 1430, 1497, 1498
StyI CCWWGG 2 cut(s) 960, 1338
TaaI ACNGT 7 cut(s) 117, 627, 727, 914, 968, 1471, 1967
TaiI ACGT 2 cut(s) 173, 478
TaqI TCGA 5 cut(s) 399, 582, 814, 916, 1868
TatI WGTACW 1 cut(s) 1763
TauI GCSGC 1 cut(s) 1484
TfiI GAWTC 2 cut(s) 5, 799
Tru1I TTAA 4 cut(s) 27, 300, 575, 1848
Tru9I TTAA 4 cut(s) 27, 300, 575, 1848
TscAI CASTG 3 cut(s) 732, 1074, 1859
TseFI GTSAC 4 cut(s) 166, 171, 1069, 1342
TseI GCWGC 6 cut(s) 191, 287, 336, 431, 989, 1396
Tsp45I GTSAC 4 cut(s) 166, 171, 1069, 1342
TspGWI ACGGA 1 cut(s) 1040
TspMI CCCGGG 1 cut(s) 1498
TspRI CASTG 3 cut(s) 732, 1074, 1859
Vha464I CTTAAG 1 cut(s) 574
XapI RAATTY 4 cut(s) 78, 1320, 1369, 1942
XbaI TCTAGA 2 cut(s) 8, 970
XceI RCATGY 1 cut(s) 1090
XmaI CCCGGG 1 cut(s) 1498
XspI CTAG 9 cut(s) 9, 498, 971, 1182, 1215, 1236, 1362, 1448, 1844
Zsp2I ATGCAT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.