Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000994

Physical Location & Seq

Genomic Coordinates Forward (+)

25487682 .. 25489312

Gene Structure 1631 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G67980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGGCCAATGAAATTCCTACCAAAGGGATTCTCAAGAGCGAAGCTCTAAAACAGTACATCATGGAAACGTCAGCGTATCCAAGAGAGCATGAATTGCTCAAGGAACTTCGAAAAGCTACTGTCCAAAAATACGGAAATTTAAGCGAGATGGAGGTTCCGGTTGATGAGGGTCATTTCCTATCGATGCTTGTAAAGATCATGAATGCGAAAAACACTATCGAGATCGGTGTTTTCACCGGTTACTCGCTTCTCACTACAGCTCTTGCTTTACCTGAAGATGGCCGTATTACCGCGATAGACATTGATAAAGAAGCTTACGAAGTTGGACTAGAGTTTATTAAGAAGGCTGGTGTTGATCACAAGATTAATTTTATCCATTCCGATGGTCTTAAGGCCTTAGACCAATTGGTGAACGACAAATGTGAGTTTGATTTTGCATTTGCGGATGCTGACAAATCAAGCTACGTCAACTTCCATGAGAGGCTTCTAAAATTGGTGAAGGTTGGGGGAATCATTGCGTTCGACAACACCTTGTGGTTTGGTTTTGTGGCGGAGGATGAAGATGGAGTTCCGGAGCATATGAGAGAATATAGAGCAGCTCTTATAGAATTCAATAAGAAATTGGCTTTGGATCCCCGAGTCGAGGTCTCTCAGATTTCCATTGGAGATGGTATCACGCTCTGTAGACGTCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008757 GO:0009058 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009987 GO:0010154 GO:0016740 GO:0016741 GO:0019438 GO:0019748 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034641 GO:0042409 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0080012 GO:0080076 GO:0080077 GO:0080078 GO:0080088 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko00941 ko00945 ko00950 ko01100 ko01110 map00360 map00940 map00941 map00945 map00950 map01100 map01110

Pfam Domains

Protein Families

Methyltransf_3

Protein Analysis

232

Amino Acids

26.11

Weight (kDa)

5.16

Isoelectric Point (pI)

20.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_3	PF01596	21 - 231	6.9e-100	O-methyltransferase
Methyltransf_24	PF13578	73 - 177	3.7e-12	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24735 AT1G24735 AT1G24735 AT1G67980 AT1G67980 AT1G67990
fragaria_vesca	FvH4_1g06880 FvH4_4g23870 FvH4_4g23870 FvH4_4g23880 FvH4_4g23880 FvH4_5g35170 FvH4_5g35170
malus_domestica	MD02G1073200.v1.1 MD02G1230800.v1.1 MD13G1117900.v1.1 MD16G1119200.v1.1 MD16G1119300.v1.1
prunus_persica	Prupe.1G227100_v2.0.a1 Prupe.1G227100_v2.0.a1 Prupe.1G227100_v2.0.a1 Prupe.1G227100_v2.0.a1 Prupe.2G107200_v2.0.a1 Prupe.2G107300_v2.0.a1
pyrus_communis	pycom02g19990 pycom13g10240 pycom16g10120
rosa_chinensis	RchiOBHm_Chr0c11g0499431 RchiOBHm_Chr4g0430461 RchiOBHm_Chr4g0430471 RchiOBHm_Chr4g0430481 RchiOBHm_Chr7g0236261
rosa_laevigata	RLG00000001094 RLG00000001944 RLG00000006974 RLG00000006975
rosa_multiflora	Rmu_co8207790.1_g000001 Rmu_co8303449.1_g000001 Rmu_sc0000131.1_g000035 Rmu_sc0000131.1_g000038 Rmu_sc0017358.1_g000001 Rmu_sc0017359.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147630 Rroxscaffold_2G00147640 Rroxscaffold_5G00372230 Rroxscaffold_5G00372250
rosa_rugosa	Rorug04G0243400 Rorug04G0243500 Rorug04G0243500 Rorug04G0243600
rosa_samantha	Rh4AG299800 Rh4BG306800 Rh4BG306900 Rh4CG322700 Rh4CG323000 Rh4DG303800 Rh4DG304000 Rh4DG304100 Rh7BG421700
rosa_wichuraiana	Rw4G026020 Rw4G026030 Rw7G037400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	691
AccI	GTMKAC	1 cut(s)	685
AccII	CGCG	1 cut(s)	293
AccIII	TCCGGA	1 cut(s)	571
AciI	CCGC	3 cut(s)	291, 443, 551
AclWI	GGATC	2 cut(s)	626, 639
AcoI	YGGCCR	2 cut(s)	3, 280
AcsI	RAATTY	3 cut(s)	12, 136, 608
AcuI	CTGAAG	1 cut(s)	294
AcyI	GRCGYC	1 cut(s)	688
AdeI	CACNNNGTG	1 cut(s)	534
AfaI	GTAC	1 cut(s)	56
AfiI	CCNNNNNNNGG	3 cut(s)	23, 278, 643
AflII	CTTAAG	1 cut(s)	389
AgeI	ACCGGT	1 cut(s)	236
AgsI	TTSAA	1 cut(s)	613
AjuI	GAANNNNNNNTTGG	2 cut(s)	611, 643
AluBI	AGCT	6 cut(s)	44, 116, 260, 314, 462, 599
AluI	AGCT	6 cut(s)	44, 116, 260, 314, 462, 599
Alw26I	GTCTC	1 cut(s)	652
AlwI	GGATC	2 cut(s)	626, 639
Ama87I	CYCGRG	1 cut(s)	636
Aor13HI	TCCGGA	1 cut(s)	571
AoxI	GGCC	3 cut(s)	3, 280, 393
ApeKI	GCWGC	1 cut(s)	596
ApoI	RAATTY	3 cut(s)	12, 136, 608
ArsI	GACNNNNNNTTYG	1 cut(s)	678
AseI	ATTAAT	1 cut(s)	366
AsiGI	ACCGGT	1 cut(s)	236
AsuHPI	GGTGA	3 cut(s)	226, 421, 508
AsuII	TTCGAA	1 cut(s)	109
AvaI	CYCGRG	1 cut(s)	636
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	631
BbvI	GCAGC	1 cut(s)	608
BccI	CCATC	5 cut(s)	142, 272, 377, 557, 662
BceAI	ACGGC	1 cut(s)	267
BciVI	GTATCC	1 cut(s)	87
BclI	TGATCA	1 cut(s)	355
BcoDI	GTCTC	1 cut(s)	652
BfaI	CTAG	1 cut(s)	329
BfmI	CTRYAG	2 cut(s)	255, 682
BfrI	CTTAAG	1 cut(s)	389
BfuI	GTATCC	1 cut(s)	87
BisI	GCNGC	1 cut(s)	597
BlsI	GCNGC	1 cut(s)	598
BmeT110I	CYCGRG	1 cut(s)	636
BmiI	GGNNCC	2 cut(s)	156, 633
BmsI	GCATC	2 cut(s)	174, 436
BplI	GAGNNNNNCTC	2 cut(s)	28, 60
Bpu14I	TTCGAA	1 cut(s)	109
BpuEI	CTTGAG	2 cut(s)	17, 83
Bsa29I	ATCGAT	1 cut(s)	182
BsaHI	GRCGYC	1 cut(s)	688
BsaI	GGTCTC	1 cut(s)	652
BsaWI	WCCGGW	3 cut(s)	157, 236, 571
Bsc4I	CCNNNNNNNGG	3 cut(s)	23, 278, 643
Bse118I	RCCGGY	1 cut(s)	236
Bse3DI	GCAATG	1 cut(s)	513
BseAI	TCCGGA	1 cut(s)	571
BseCI	ATCGAT	1 cut(s)	182
BseGI	GGATG	2 cut(s)	451, 562
BseLI	CCNNNNNNNGG	3 cut(s)	23, 278, 643
BseMI	GCAATG	1 cut(s)	513
BseMII	CTCAG	1 cut(s)	665
BseXI	GCAGC	1 cut(s)	608
Bsh1236I	CGCG	1 cut(s)	293
BshFI	GGCC	3 cut(s)	5, 282, 395
BshTI	ACCGGT	1 cut(s)	236
BshVI	ATCGAT	1 cut(s)	182
BsiHKCI	CYCGRG	1 cut(s)	636
BsiSI	CCGG	3 cut(s)	158, 237, 572
BslI	CCNNNNNNNGG	3 cut(s)	23, 278, 643
BsmAI	GTCTC	1 cut(s)	652
BsmI	GAATGC	1 cut(s)	208
BsnI	GGCC	3 cut(s)	5, 282, 395
Bso31I	GGTCTC	1 cut(s)	652
BsoBI	CYCGRG	1 cut(s)	636
Bsp119I	TTCGAA	1 cut(s)	109
Bsp13I	TCCGGA	1 cut(s)	571
Bsp143I	GATC	4 cut(s)	195, 222, 355, 631
BspACI	CCGC	3 cut(s)	291, 443, 551
BspANI	GGCC	3 cut(s)	5, 282, 395
BspCNI	CTCAG	1 cut(s)	664
BspDI	ATCGAT	1 cut(s)	182
BspEI	TCCGGA	1 cut(s)	571
BspFNI	CGCG	1 cut(s)	293
BspHI	TCATGA	1 cut(s)	198
BspLI	GGNNCC	2 cut(s)	156, 633
BspPI	GGATC	2 cut(s)	626, 639
BspT104I	TTCGAA	1 cut(s)	109
BspTI	CTTAAG	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	652
BsrDI	GCAATG	1 cut(s)	513
BsrFI	RCCGGY	1 cut(s)	236
BssAI	RCCGGY	1 cut(s)	236
BssMI	GATC	4 cut(s)	195, 222, 355, 631
BssNI	GRCGYC	1 cut(s)	688
Bst4CI	ACNGT	2 cut(s)	54, 121
BstACI	GRCGYC	1 cut(s)	688
BstAFI	CTTAAG	1 cut(s)	389
BstAPI	GCANNNNNTGC	1 cut(s)	94
BstBI	TTCGAA	1 cut(s)	109
BstDEI	CTNAG	2 cut(s)	397, 651
BstENI	CCTNNNNNAGG	1 cut(s)	21
BstF5I	GGATG	2 cut(s)	451, 562
BstFNI	CGCG	1 cut(s)	293
BstKTI	GATC	4 cut(s)	198, 225, 358, 634
BstMAI	GTCTC	1 cut(s)	652
BstMBI	GATC	4 cut(s)	195, 222, 355, 631
BstMWI	GCNNNNNNNGC	1 cut(s)	94
BstSFI	CTRYAG	2 cut(s)	255, 682
BstUI	CGCG	1 cut(s)	293
BstV1I	GCAGC	1 cut(s)	608
BstX2I	RGATCY	1 cut(s)	631
BstXI	CCANNNNNNTGG	1 cut(s)	383
BstYI	RGATCY	1 cut(s)	631
Bsu15I	ATCGAT	1 cut(s)	182
BsuI	GTATCC	1 cut(s)	87
BsuRI	GGCC	3 cut(s)	5, 282, 395
BsuTUI	ATCGAT	1 cut(s)	182
BtsCI	GGATG	2 cut(s)	451, 562
CciI	TCATGA	1 cut(s)	198
Cfr10I	RCCGGY	1 cut(s)	236
ClaI	ATCGAT	1 cut(s)	182
Csp6I	GTAC	1 cut(s)	55
CspAI	ACCGGT	1 cut(s)	236
CviAII	CATG	4 cut(s)	61, 89, 199, 476
CviQI	GTAC	1 cut(s)	55
DdeI	CTNAG	2 cut(s)	397, 651
DpnI	GATC	4 cut(s)	197, 224, 357, 633
DpnII	GATC	4 cut(s)	195, 222, 355, 631
DraIII	CACNNNGTG	1 cut(s)	534
EaeI	YGGCCR	2 cut(s)	3, 280
EciI	GGCGGA	1 cut(s)	566
Eco147I	AGGCCT	1 cut(s)	395
Eco31I	GGTCTC	1 cut(s)	652
Eco57I	CTGAAG	1 cut(s)	294
Eco88I	CYCGRG	1 cut(s)	636
EcoNI	CCTNNNNNAGG	1 cut(s)	21
EcoRI	GAATTC	1 cut(s)	608
FaeI	CATG	4 cut(s)	64, 92, 202, 479
FaiI	YATR	8 cut(s)	62, 90, 200, 477, 579, 581, 591, 605
FatI	CATG	4 cut(s)	60, 88, 198, 475
FauNDI	CATATG	1 cut(s)	579
FbaI	TGATCA	1 cut(s)	355
FblI	GTMKAC	1 cut(s)	685
Fnu4HI	GCNGC	1 cut(s)	597
FokI	GGATG	2 cut(s)	458, 569
Fsp4HI	GCNGC	1 cut(s)	597
FspBI	CTAG	1 cut(s)	329
GluI	GCNGC	1 cut(s)	597
HaeIII	GGCC	3 cut(s)	5, 282, 395
HapII	CCGG	3 cut(s)	158, 237, 572
Hin1I	GRCGYC	1 cut(s)	688
Hin1II	CATG	4 cut(s)	64, 92, 202, 479
HincII	GTYRAC	1 cut(s)	469
HindII	GTYRAC	1 cut(s)	469
HindIII	AAGCTT	1 cut(s)	312
HinfI	GANTC	3 cut(s)	28, 510, 639
HpaII	CCGG	3 cut(s)	158, 237, 572
HphI	GGTGA	3 cut(s)	226, 421, 508
Hpy166II	GTNNAC	3 cut(s)	412, 469, 686
Hpy188I	TCNGA	2 cut(s)	382, 654
Hpy188III	TCNNGA	4 cut(s)	34, 199, 220, 572
Hpy8I	GTNNAC	3 cut(s)	412, 469, 686
HpyAV	CCTTC	2 cut(s)	337, 493
HpyCH4III	ACNGT	2 cut(s)	54, 121
HpyCH4IV	ACGT	3 cut(s)	68, 465, 688
HpyCH4V	TGCA	1 cut(s)	437
HpyF10VI	GCNNNNNNNGC	1 cut(s)	94
HpyF3I	CTNAG	2 cut(s)	397, 651
HpySE526I	ACGT	3 cut(s)	68, 465, 688
Hsp92I	GRCGYC	1 cut(s)	688
Hsp92II	CATG	4 cut(s)	64, 92, 202, 479
Kpn2I	TCCGGA	1 cut(s)	571
Ksp22I	TGATCA	1 cut(s)	355
Kzo9I	GATC	4 cut(s)	195, 222, 355, 631
LmnI	GCTCC	1 cut(s)	574
LpnPI	CCDG	5 cut(s)	171, 250, 285, 333, 585
Lsp1109I	GCAGC	1 cut(s)	608
LweI	GCATC	2 cut(s)	174, 436
MaeI	CTAG	1 cut(s)	329
MaeII	ACGT	3 cut(s)	68, 465, 688
MaeIII	GTNAC	1 cut(s)	239
MalI	GATC	4 cut(s)	197, 224, 357, 633
MboI	GATC	4 cut(s)	195, 222, 355, 631
MboII	GAAGA	2 cut(s)	287, 572
MfeI	CAATTG	1 cut(s)	404
MflI	RGATCY	1 cut(s)	631
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	12, 92, 136, 367, 404, 491, 608, 620
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	648
MmeI	TCCRAC	1 cut(s)	304
MnlI	CCTC	5 cut(s)	145, 160, 474, 547, 637
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	571
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	140, 339, 366, 390
MslI	CAYNNNNRTG	1 cut(s)	381
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	3 cut(s)	158, 237, 572
MunI	CAATTG	1 cut(s)	404
Mva1269I	GAATGC	1 cut(s)	208
MvnI	CGCG	1 cut(s)	293
MwoI	GCNNNNNNNGC	1 cut(s)	94
NdeI	CATATG	1 cut(s)	579
NdeII	GATC	4 cut(s)	195, 222, 355, 631
NlaIII	CATG	4 cut(s)	64, 92, 202, 479
NlaIV	GGNNCC	2 cut(s)	156, 633
NspV	TTCGAA	1 cut(s)	109
PagI	TCATGA	1 cut(s)	198
PceI	AGGCCT	1 cut(s)	395
PctI	GAATGC	1 cut(s)	208
PfeI	GAWTC	2 cut(s)	28, 510
PinAI	ACCGGT	1 cut(s)	236
PkrI	GCNGC	1 cut(s)	598
PleI	GAGTC	1 cut(s)	647
PpsI	GAGTC	1 cut(s)	647
PshBI	ATTAAT	1 cut(s)	366
PspN4I	GGNNCC	2 cut(s)	156, 633
PsuI	RGATCY	1 cut(s)	631
RsaI	GTAC	1 cut(s)	56
RsaNI	GTAC	1 cut(s)	55
RseI	CAYNNNNRTG	1 cut(s)	381
SaqAI	TTAA	4 cut(s)	140, 339, 366, 390
SatI	GCNGC	1 cut(s)	597
Sau3AI	GATC	4 cut(s)	195, 222, 355, 631
SchI	GAGTC	1 cut(s)	648
SfaNI	GCATC	2 cut(s)	174, 436
SfcI	CTRYAG	2 cut(s)	255, 682
SfuI	TTCGAA	1 cut(s)	109
SmiMI	CAYNNNNRTG	1 cut(s)	381
SmlI	CTYRAG	3 cut(s)	32, 98, 389
SmoI	CTYRAG	3 cut(s)	32, 98, 389
Sse9I	AATT	8 cut(s)	12, 92, 136, 367, 404, 491, 608, 620
SseBI	AGGCCT	1 cut(s)	395
SsiI	CCGC	3 cut(s)	291, 443, 551
SspMI	CTAG	1 cut(s)	329
StuI	AGGCCT	1 cut(s)	395
TaaI	ACNGT	2 cut(s)	54, 121
TaiI	ACGT	3 cut(s)	71, 468, 691
TaqI	TCGA	5 cut(s)	109, 182, 219, 522, 642
TasI	AATT	8 cut(s)	12, 92, 136, 367, 404, 491, 608, 620
TatI	WGTACW	1 cut(s)	54
TfiI	GAWTC	2 cut(s)	28, 510
Tru1I	TTAA	4 cut(s)	140, 339, 366, 390
Tru9I	TTAA	4 cut(s)	140, 339, 366, 390
TseI	GCWGC	1 cut(s)	596
TspDTI	ATGAA	4 cut(s)	24, 105, 215, 573
TspGWI	ACGGA	1 cut(s)	147
Vha464I	CTTAAG	1 cut(s)	389
VspI	ATTAAT	1 cut(s)	366
XagI	CCTNNNNNAGG	1 cut(s)	21
XapI	RAATTY	3 cut(s)	12, 136, 608
XmiI	GTMKAC	1 cut(s)	685
XspI	CTAG	1 cut(s)	329
ZraI	GACGTC	1 cut(s)	689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.