Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000994

Physical Location & Seq

Genomic Coordinates Forward (+)

25489455 .. 25490867

Gene Structure 1413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G67990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 702 bp

ATGGATGGTCGATTACCTGACAAAGGCATTCTCAAGAGCGAGGCTCTAAAACAGTACATCATGGAAACAACAGCGTATCCAAGAGAACACGAATTGCTTAAAGAACTTCGAGAAGCTACAATCCAGAGATATGGAAATTTAAGCGAGATGGGAGTTCCGGTTGATGAAAGTCTATTTTTATCGATGCTTGTAAAGATCATCAACGCGAAAAACACTATCGAGATCGGTGTGTTCACCGGTTACTCACTTTTCACCGTAGCTCTTGCTTTGCCTGAAGATGGCCGTATTACTGCGATAGACATTGATCAAGCAGGTTACAATTTGGGACTAGAGTTTATGAAGAAAGCAGGTGTTGATCACAAGATCAATTTCATTCAATCTGATGCTGTTAGAGGCTTAGACCAATTATTGAACGGGGAGAAACAAGAGTATGATTTTGCATTTGTGGATGCTGACAAGACGAACTACGTTTACTTCCTTGAGAAGCTCCTTAAGTTAGTGAAGGTTGGAGGAATCATTGCCTTCGACAACACTTTATGGTTTGGTACTCTAATTCAGAAGGAAAACGAAGTTCCAGGCCATATGAGAGCTTATAGAGAGGCACTTTTAGAGTTCAATAAGATATTGGCTCGGGATCCTCGAGTCGAAATCGCTCAAATATCCATCGGAGATGGTCTCACGCTATGTAGACGTCTTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008757 GO:0009058 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009987 GO:0010154 GO:0016740 GO:0016741 GO:0019438 GO:0019748 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034641 GO:0042409 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0080012 GO:0080076 GO:0080077 GO:0080078 GO:0080088 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko00941 ko00945 ko00950 ko01100 ko01110 map00360 map00940 map00941 map00945 map00950 map01100 map01110

Pfam Domains

Protein Families

Methyltransf_3

Protein Analysis

233

Amino Acids

26.35

Weight (kDa)

5.25

Isoelectric Point (pI)

19.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_3	PF01596	22 - 232	2.7e-85	O-methyltransferase
Methyltransf_24	PF13578	73 - 178	7.9e-13	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24735 AT1G24735 AT1G24735 AT1G67980 AT1G67980 AT1G67990
fragaria_vesca	FvH4_1g06880 FvH4_4g23870 FvH4_4g23870 FvH4_4g23880 FvH4_4g23880 FvH4_5g35170 FvH4_5g35170
malus_domestica	MD02G1073200.v1.1 MD02G1230800.v1.1 MD13G1117900.v1.1 MD16G1119200.v1.1 MD16G1119300.v1.1
prunus_persica	Prupe.1G227100_v2.0.a1 Prupe.1G227100_v2.0.a1 Prupe.1G227100_v2.0.a1 Prupe.1G227100_v2.0.a1 Prupe.2G107200_v2.0.a1 Prupe.2G107300_v2.0.a1
pyrus_communis	pycom02g19990 pycom13g10240 pycom16g10120
rosa_chinensis	RchiOBHm_Chr0c11g0499431 RchiOBHm_Chr4g0430461 RchiOBHm_Chr4g0430471 RchiOBHm_Chr4g0430481 RchiOBHm_Chr7g0236261
rosa_laevigata	RLG00000001094 RLG00000001944 RLG00000006974 RLG00000006975
rosa_multiflora	Rmu_co8207790.1_g000001 Rmu_co8303449.1_g000001 Rmu_sc0000131.1_g000035 Rmu_sc0000131.1_g000038 Rmu_sc0017358.1_g000001 Rmu_sc0017359.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147630 Rroxscaffold_2G00147640 Rroxscaffold_5G00372230 Rroxscaffold_5G00372250
rosa_rugosa	Rorug04G0243400 Rorug04G0243500 Rorug04G0243500 Rorug04G0243600
rosa_samantha	Rh4AG299800 Rh4BG306800 Rh4BG306900 Rh4CG322700 Rh4CG323000 Rh4DG303800 Rh4DG304000 Rh4DG304100 Rh7BG421700
rosa_wichuraiana	Rw4G026020 Rw4G026030 Rw7G037400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	338
AatII	GACGTC	1 cut(s)	694
Acc36I	ACCTGC	2 cut(s)	302, 338
AccI	GTMKAC	1 cut(s)	688
AccII	CGCG	1 cut(s)	206
AclWI	GGATC	2 cut(s)	629, 642
AcoI	YGGCCR	1 cut(s)	280
AcsI	RAATTY	1 cut(s)	136
AcuI	CTGAAG	1 cut(s)	294
AcyI	GRCGYC	1 cut(s)	691
AfaI	GTAC	2 cut(s)	56, 547
AfiI	CCNNNNNNNGG	2 cut(s)	23, 278
AflII	CTTAAG	1 cut(s)	491
AgeI	ACCGGT	1 cut(s)	236
AgsI	TTSAA	3 cut(s)	377, 412, 616
AjnI	CCWGG	1 cut(s)	574
AluBI	AGCT	4 cut(s)	116, 260, 487, 590
AluI	AGCT	4 cut(s)	116, 260, 487, 590
Alw26I	GTCTC	1 cut(s)	680
AlwI	GGATC	2 cut(s)	629, 642
Ama87I	CYCGRG	2 cut(s)	630, 639
AoxI	GGCC	2 cut(s)	280, 577
ApoI	RAATTY	1 cut(s)	136
AsiGI	ACCGGT	1 cut(s)	236
AsuHPI	GGTGA	2 cut(s)	226, 244
AvaI	CYCGRG	2 cut(s)	630, 639
BamHI	GGATCC	1 cut(s)	634
BccI	CCATC	4 cut(s)	142, 272, 665, 671
BceAI	ACGGC	1 cut(s)	267
BciT130I	CCWGG	1 cut(s)	576
BciVI	GTATCC	1 cut(s)	87
BclI	TGATCA	2 cut(s)	304, 355
BcoDI	GTCTC	1 cut(s)	680
BfaI	CTAG	1 cut(s)	329
BfrI	CTTAAG	1 cut(s)	491
BfuAI	ACCTGC	2 cut(s)	302, 338
BfuI	GTATCC	1 cut(s)	87
Bme1390I	CCNGG	1 cut(s)	576
BmeT110I	CYCGRG	2 cut(s)	630, 639
BmiI	GGNNCC	1 cut(s)	636
BmrFI	CCNGG	1 cut(s)	576
BmsI	GCATC	3 cut(s)	174, 373, 439
BplI	GAGNNNNNCTC	4 cut(s)	28, 60, 660, 692
BpuEI	CTTGAG	2 cut(s)	17, 500
Bsa29I	ATCGAT	1 cut(s)	182
BsaHI	GRCGYC	1 cut(s)	691
BsaI	GGTCTC	1 cut(s)	680
BsaWI	WCCGGW	2 cut(s)	157, 236
BsaXI	ACNNNNNCTCC	2 cut(s)	144, 174
Bsc4I	CCNNNNNNNGG	2 cut(s)	23, 278
Bse118I	RCCGGY	1 cut(s)	236
Bse3DI	GCAATG	1 cut(s)	516
BseBI	CCWGG	1 cut(s)	576
BseCI	ATCGAT	1 cut(s)	182
BseGI	GGATG	2 cut(s)	10, 454
BseLI	CCNNNNNNNGG	2 cut(s)	23, 278
BseMI	GCAATG	1 cut(s)	516
Bsh1236I	CGCG	1 cut(s)	206
BshFI	GGCC	2 cut(s)	282, 579
BshTI	ACCGGT	1 cut(s)	236
BshVI	ATCGAT	1 cut(s)	182
BsiHKCI	CYCGRG	2 cut(s)	630, 639
BsiSI	CCGG	2 cut(s)	158, 237
BslFI	GGGAC	1 cut(s)	339
BslI	CCNNNNNNNGG	2 cut(s)	23, 278
BsmAI	GTCTC	1 cut(s)	680
BsmFI	GGGAC	1 cut(s)	339
BsmI	GAATGC	1 cut(s)	27
BsnI	GGCC	2 cut(s)	282, 579
Bso31I	GGTCTC	1 cut(s)	680
BsoBI	CYCGRG	2 cut(s)	630, 639
Bsp143I	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
BspANI	GGCC	2 cut(s)	282, 579
BspDI	ATCGAT	1 cut(s)	182
BspFNI	CGCG	1 cut(s)	206
BspLI	GGNNCC	1 cut(s)	636
BspMI	ACCTGC	2 cut(s)	302, 338
BspPI	GGATC	2 cut(s)	629, 642
BspTI	CTTAAG	1 cut(s)	491
BspTNI	GGTCTC	1 cut(s)	680
BsrDI	GCAATG	1 cut(s)	516
BsrFI	RCCGGY	1 cut(s)	236
BssAI	RCCGGY	1 cut(s)	236
BssMI	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
BssNI	GRCGYC	1 cut(s)	691
Bst2UI	CCWGG	1 cut(s)	576
Bst4CI	ACNGT	2 cut(s)	54, 256
BstACI	GRCGYC	1 cut(s)	691
BstAFI	CTTAAG	1 cut(s)	491
BstDEI	CTNAG	1 cut(s)	397
BstENI	CCTNNNNNAGG	1 cut(s)	21
BstF5I	GGATG	2 cut(s)	10, 454
BstFNI	CGCG	1 cut(s)	206
BstKTI	GATC	6 cut(s)	198, 225, 307, 358, 366, 637
BstMAI	GTCTC	1 cut(s)	680
BstMBI	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
BstNI	CCWGG	1 cut(s)	576
BstSCI	CCNGG	1 cut(s)	574
BstUI	CGCG	1 cut(s)	206
BstX2I	RGATCY	1 cut(s)	634
BstXI	CCANNNNNNTGG	1 cut(s)	131
BstYI	RGATCY	1 cut(s)	634
Bsu15I	ATCGAT	1 cut(s)	182
BsuI	GTATCC	1 cut(s)	87
BsuRI	GGCC	2 cut(s)	282, 579
BsuTUI	ATCGAT	1 cut(s)	182
BtsCI	GGATG	2 cut(s)	10, 454
BveI	ACCTGC	2 cut(s)	302, 338
Cfr10I	RCCGGY	1 cut(s)	236
ClaI	ATCGAT	1 cut(s)	182
Csp6I	GTAC	2 cut(s)	55, 546
CspAI	ACCGGT	1 cut(s)	236
CviAII	CATG	1 cut(s)	61
CviJI	RGCY	9 cut(s)	44, 116, 260, 282, 396, 487, 579, 590, 629
CviKI_1	RGCY	9 cut(s)	44, 116, 260, 282, 396, 487, 579, 590, 629
CviQI	GTAC	2 cut(s)	55, 546
DdeI	CTNAG	1 cut(s)	397
DpnI	GATC	6 cut(s)	197, 224, 306, 357, 365, 636
DpnII	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
EaeI	YGGCCR	1 cut(s)	280
Eco31I	GGTCTC	1 cut(s)	680
Eco57I	CTGAAG	1 cut(s)	294
Eco88I	CYCGRG	2 cut(s)	630, 639
EcoNI	CCTNNNNNAGG	1 cut(s)	21
EcoRII	CCWGG	1 cut(s)	574
FaeI	CATG	1 cut(s)	64
FaqI	GGGAC	1 cut(s)	339
FatI	CATG	1 cut(s)	60
FauNDI	CATATG	1 cut(s)	582
FbaI	TGATCA	2 cut(s)	304, 355
FblI	GTMKAC	1 cut(s)	688
FokI	GGATG	2 cut(s)	17, 461
FspBI	CTAG	1 cut(s)	329
HaeIII	GGCC	2 cut(s)	282, 579
HapII	CCGG	2 cut(s)	158, 237
Hin1I	GRCGYC	1 cut(s)	691
Hin1II	CATG	1 cut(s)	64
HinfI	GANTC	2 cut(s)	513, 642
HpaII	CCGG	2 cut(s)	158, 237
HphI	GGTGA	2 cut(s)	226, 244
Hpy166II	GTNNAC	3 cut(s)	234, 472, 689
Hpy188I	TCNGA	3 cut(s)	382, 558, 668
Hpy188III	TCNNGA	5 cut(s)	34, 110, 124, 220, 632
Hpy8I	GTNNAC	3 cut(s)	234, 472, 689
HpyAV	CCTTC	3 cut(s)	496, 532, 553
HpyCH4III	ACNGT	2 cut(s)	54, 256
HpyCH4IV	ACGT	2 cut(s)	468, 691
HpyCH4V	TGCA	1 cut(s)	440
HpyF3I	CTNAG	1 cut(s)	397
HpySE526I	ACGT	2 cut(s)	468, 691
Hsp92I	GRCGYC	1 cut(s)	691
Hsp92II	CATG	1 cut(s)	64
Ksp22I	TGATCA	2 cut(s)	304, 355
Kzo9I	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
LmnI	GCTCC	1 cut(s)	492
LpnPI	CCDG	9 cut(s)	30, 137, 171, 250, 285, 297, 333, 561, 588
LweI	GCATC	3 cut(s)	174, 373, 439
MaeI	CTAG	1 cut(s)	329
MaeII	ACGT	2 cut(s)	468, 691
MaeIII	GTNAC	2 cut(s)	239, 314
MalI	GATC	6 cut(s)	197, 224, 306, 357, 365, 636
MboI	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
MboII	GAAGA	2 cut(s)	287, 352
MflI	RGATCY	1 cut(s)	634
MluCI	AATT	6 cut(s)	92, 136, 319, 367, 404, 552
MlyI	GAGTC	1 cut(s)	651
MmeI	TCCRAC	1 cut(s)	487
MnlI	CCTC	5 cut(s)	34, 386, 503, 592, 648
MseI	TTAA	3 cut(s)	99, 140, 492
MspCI	CTTAAG	1 cut(s)	491
MspI	CCGG	2 cut(s)	158, 237
MspR9I	CCNGG	1 cut(s)	576
Mva1269I	GAATGC	1 cut(s)	27
MvaI	CCWGG	1 cut(s)	576
MvnI	CGCG	1 cut(s)	206
NdeI	CATATG	1 cut(s)	582
NdeII	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
NlaIII	CATG	1 cut(s)	64
NlaIV	GGNNCC	1 cut(s)	636
PaeR7I	CTCGAG	1 cut(s)	639
PaqCI	CACCTGC	1 cut(s)	338
PcsI	WCGNNNNNNNCGW	1 cut(s)	637
PctI	GAATGC	1 cut(s)	27
PfeI	GAWTC	1 cut(s)	513
PinAI	ACCGGT	1 cut(s)	236
PleI	GAGTC	1 cut(s)	650
PpsI	GAGTC	1 cut(s)	650
Psp6I	CCWGG	1 cut(s)	574
PspGI	CCWGG	1 cut(s)	574
PspN4I	GGNNCC	1 cut(s)	636
PspXI	VCTCGAGB	1 cut(s)	639
PsrI	GAACNNNNNNTAC	2 cut(s)	455, 487
PsuI	RGATCY	1 cut(s)	634
RsaI	GTAC	2 cut(s)	56, 547
RsaNI	GTAC	2 cut(s)	55, 546
SaqAI	TTAA	3 cut(s)	99, 140, 492
Sau3AI	GATC	6 cut(s)	195, 222, 304, 355, 363, 634
SchI	GAGTC	1 cut(s)	651
ScrFI	CCNGG	1 cut(s)	576
SfaNI	GCATC	3 cut(s)	174, 373, 439
Sfr274I	CTCGAG	1 cut(s)	639
SlaI	CTCGAG	1 cut(s)	639
SmlI	CTYRAG	4 cut(s)	32, 479, 491, 639
SmoI	CTYRAG	4 cut(s)	32, 479, 491, 639
Sse9I	AATT	6 cut(s)	92, 136, 319, 367, 404, 552
SspMI	CTAG	1 cut(s)	329
StyD4I	CCNGG	1 cut(s)	574
TaaI	ACNGT	2 cut(s)	54, 256
TaiI	ACGT	2 cut(s)	471, 694
TaqI	TCGA	7 cut(s)	10, 109, 182, 219, 525, 640, 645
TasI	AATT	6 cut(s)	92, 136, 319, 367, 404, 552
TatI	WGTACW	1 cut(s)	54
TfiI	GAWTC	1 cut(s)	513
Tru1I	TTAA	3 cut(s)	99, 140, 492
Tru9I	TTAA	3 cut(s)	99, 140, 492
TspDTI	ATGAA	3 cut(s)	180, 353, 361
Vha464I	CTTAAG	1 cut(s)	491
XagI	CCTNNNNNAGG	1 cut(s)	21
XapI	RAATTY	1 cut(s)	136
XhoI	CTCGAG	1 cut(s)	639
XmiI	GTMKAC	1 cut(s)	688
XspI	CTAG	1 cut(s)	329
ZraI	GACGTC	1 cut(s)	692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.