AT1G70830

MLP-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000362
Physical Location & Seq
Reverse (-)
26709889 .. 26711587
1699 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70830.1

Sequence Viewer

Length: 1008 bp
ATGGCCGACGTAGCAACAAAGCACCCCATGGAAGATGAGGTGAAGAAGACGGAGGCGTCTAGTTTGGTGGGGAAGCTAGAGACAGACGTGGAGATCAAGGCTTCGGCTGATAAGTTTCACCACATGTTCGCTGGGAAACCACACCATGTCTCCAAAGCAAGTCCAGGCAACATTCAGGGATGTGATCTGCACGAAGGCGACTGGGGCACAGTCGGCTCTATCGTCTTCTGGAATTACGTACATGATGGGGAGGCAAAGGTGGCGAAGGAGAGGATCGAGGCGGTGGAGCCAGATAAGAACTTGATCACGTTTAGGGTTATAGAAGGTGATCTGATGAAAGAGTACAAGAGCTTCTTGCTCACCATCCAGGTGACCCCTAAGCCTGGAGGCCCTGGAAGTATTGTGCACTGGCACCTTGAGTATGAGAAAATTAGCGAGGAGGTAGCTCACCCGGAAACTCTCCTCCAGTTCTGTGTCGAGGTCTCCAAAGAGATCGACGAACATCTCTTGGCCGAGGAAGAGGAGGTGAAGACACCAGAGACGCCTAGTTTGGTGGGAAAGCTAGAGACAGACGTGGAGATCAAAGCTTCCGCTGAGAAGTTCCATCACATGTTCGCCGGGAAACCACACCATGTCTCTAAAGCATCTCCAGGAAACATTCAAGGTTGTGATCTTCACGAAGGCGACTGGGGTCAAGTCGGCTCTATCGTCTTCTGGAACTACGTTCATGATAGAGAGGCAAAGGTGGCTAAGGAGAGGATTGAGGCAGTGGAGCCGAATAAGAACTTGATCACGTTTAGGGTTATCGACGGTGATCTGATGAAAGAGTACAAGAGCTTCTTGCTCACGATCCAGGTGACCCCGAAGCTTGGAGGCCCTGGAAGTATTGTGCACTGGCACCTTGAGTATGAGAAAATAAGCGAGGAGGTAGCTCATCCGGAAACTCTCCTCCAATTCTGTGTCGAGGTCTCGAAAGAGATCGACGAACATCTTTTGGCCGAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bet_v_1

Protein Analysis

335

Amino Acids

37.61

Weight (kDa)

5.2

Isoelectric Point (pI)

27.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bet_v_1 PF00407 21 - 172 1e-62 Pathogenesis-related protein Bet v 1 family
Polyketide_cyc2 PF10604 25 - 143 3.2e-06 Polyketide cyclase / dehydrase and lipid transport
Bet_v_1 PF00407 183 - 334 1.1e-61 Pathogenesis-related protein Bet v 1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000362)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G23130 AT1G35260 AT1G35310 AT1G70830 AT1G70830 AT1G70830 AT1G70830 AT1G70830 AT1G70840 AT1G70850 AT1G70850 AT1G70850 AT1G70860 AT1G70860 AT1G70880 AT1G70890 AT5G28000 AT5G28010 AT5G28010
fragaria_vesca FvH4_4g32750 FvH4_4g32760 FvH4_4g32770 FvH4_4g32770 FvH4_4g32780
malus_domestica MD00G1063600.v1.1 MD13G1022700.v1.1 MD13G1022900.v1.1 MD13G1023000.v1.1 MD16G1024000.v1.1
prunus_persica Prupe.1G328500_v2.0.a1 Prupe.1G328600_v2.0.a1 Prupe.1G328800_v2.0.a1 Prupe.1G329000_v2.0.a1
pyrus_communis pycom16g02080
rosa_chinensis RchiOBHm_Chr1g0324501 RchiOBHm_Chr1g0324511 RchiOBHm_Chr4g0392511 RchiOBHm_Chr4g0392581 RchiOBHm_Chr4g0392611 RchiOBHm_Chr4g0441741 RchiOBHm_Chr4g0441751 RchiOBHm_Chr4g0441771
rosa_laevigata RLG00000006068 RLG00000006069 RLG00000006070 RLG00000009801 RLG00000030196 RLG00000030197 RLG00000034286
rosa_multiflora Rmu_co8369709.1_g000001 Rmu_co8434885.1_g000001 Rmu_sc0000353.1_g000003 Rmu_sc0000353.1_g000005 Rmu_sc0000498.1_g000002 Rmu_sc0000498.1_g000016 Rmu_sc0001866.1_g000004 Rmu_sc0003124.1_g000016 Rmu_sc0008279.1_g000010 Rmu_ssc0000486.1_g000033
rosa_roxburghii Rroxscaffold_159G00432880 Rroxscaffold_159G00432890 Rroxscaffold_4G00325460 Rroxscaffold_4G00325470 Rroxscaffold_5G00337770 Rroxscaffold_5G00382550 Rroxscaffold_5G00382570 Rroxscaffold_5G00382580
rosa_rugosa Rorug01G0046500 Rorug01G0046600 Rorug03G0339400 Rorug03G0339500 Rorug04G0335600 Rorug04G0335900.1 Rorug04G0336000 Rorug04G0336100
rosa_samantha Rh1AG062200 Rh1AG062300 Rh1BG052500 Rh1BG052600 Rh1CG064200 Rh1CG064400 Rh1DG068300 Rh1DG068400 Rh4AG043500 Rh4AG387200 Rh4AG387300 Rh4BG038400 Rh4BG038600 Rh4BG038800 Rh4BG400900 Rh4BG401000 Rh4CG046300 Rh4CG046600 Rh4CG416000 Rh4CG416100 Rh4DG040500 Rh4DG394300 Rh4DG394400 Rh5AG299400
rosa_wichuraiana Rw0G012190 Rw1G005260 Rw1G005280 Rw4G003410 Rw4G033400 Rw4G033410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 55
AccB1I GGYRCC 2 cut(s) 411, 897
AccIII TCCGGA 1 cut(s) 937
AciI CCGC 2 cut(s) 281, 591
AclWI GGATC 2 cut(s) 281, 844
AcoI YGGCCR 3 cut(s) 3, 510, 996
AcyI GRCGYC 2 cut(s) 56, 542
AfaI GTAC 3 cut(s) 240, 344, 830
AfiI CCNNNNNNNGG 2 cut(s) 383, 869
AflIII ACRYGT 2 cut(s) 123, 609
AgsI TTSAA 1 cut(s) 662
AjiI CACGTC 2 cut(s) 88, 574
AjnI CCWGG 7 cut(s) 163, 366, 382, 391, 649, 852, 877
AluBI AGCT 8 cut(s) 76, 351, 446, 562, 587, 837, 868, 932
AluI AGCT 8 cut(s) 76, 351, 446, 562, 587, 837, 868, 932
Alw21I GWGCWC 2 cut(s) 408, 894
Alw26I GTCTC 7 cut(s) 74, 154, 487, 533, 560, 640, 973
Alw44I GTGCAC 2 cut(s) 404, 890
AlwI GGATC 2 cut(s) 281, 844
Aor13HI TCCGGA 1 cut(s) 937
AoxI GGCC 5 cut(s) 3, 388, 510, 874, 996
ApaLI GTGCAC 2 cut(s) 404, 890
ArsI GACNNNNNNTTYG 2 cut(s) 532, 564
AspS9I GGNCC 2 cut(s) 389, 875
AsuC2I CCSGG 2 cut(s) 452, 619
AsuHPI GGTGA 9 cut(s) 52, 110, 338, 352, 382, 440, 538, 824, 868
BaeGI GKGCMC 3 cut(s) 209, 408, 894
BanI GGYRCC 2 cut(s) 411, 897
BarI GAAGNNNNNNTAC 4 cut(s) 335, 367, 821, 853
BbsI GAAGAC 4 cut(s) 53, 217, 536, 703
Bbv12I GWGCWC 2 cut(s) 408, 894
BccI CCATC 3 cut(s) 239, 371, 612
BciT130I CCWGG 7 cut(s) 165, 368, 384, 393, 651, 854, 879
BclI TGATCA 2 cut(s) 303, 789
BcnI CCSGG 2 cut(s) 452, 619
BcoDI GTCTC 7 cut(s) 74, 154, 487, 533, 560, 640, 973
BfaI CTAG 4 cut(s) 60, 77, 546, 563
Bme1390I CCNGG 9 cut(s) 165, 368, 384, 393, 452, 619, 651, 854, 879
BmgBI CACGTC 2 cut(s) 88, 574
BmgT120I GGNCC 2 cut(s) 389, 875
BmiI GGNNCC 4 cut(s) 288, 413, 774, 899
BmrFI CCNGG 9 cut(s) 165, 368, 384, 393, 452, 619, 651, 854, 879
BmrI ACTGGG 2 cut(s) 211, 697
BmsI GCATC 1 cut(s) 653
BmuI ACTGGG 2 cut(s) 211, 697
BoxI GACNNNNGTC 1 cut(s) 690
BpiI GAAGAC 4 cut(s) 53, 217, 536, 703
BpmI CTGGAG 3 cut(s) 405, 449, 633
Bpu10I CCTNAGC 2 cut(s) 378, 750
BpuEI CTTGAG 2 cut(s) 437, 923
BpuMI CCSGG 2 cut(s) 452, 619
BsaAI YACGTR 1 cut(s) 238
BsaHI GRCGYC 2 cut(s) 56, 542
BsaI GGTCTC 2 cut(s) 487, 973
BsaJI CCNNGG 5 cut(s) 27, 391, 513, 877, 999
BsaWI WCCGGW 1 cut(s) 937
BsaXI ACNNNNNCTCC 2 cut(s) 134, 164
Bsc4I CCNNNNNNNGG 2 cut(s) 383, 869
Bse1I ACTGG 5 cut(s) 206, 413, 466, 692, 899
BseAI TCCGGA 1 cut(s) 937
BseBI CCWGG 7 cut(s) 165, 368, 384, 393, 651, 854, 879
BseDI CCNNGG 5 cut(s) 27, 391, 513, 877, 999
BseGI GGATG 3 cut(s) 185, 363, 934
BseLI CCNNNNNNNGG 2 cut(s) 383, 869
BseMII CTCAG 1 cut(s) 585
BseNI ACTGG 5 cut(s) 206, 413, 466, 692, 899
BseRI GAGGAG 5 cut(s) 452, 452, 536, 938, 938
BseSI GKGCMC 3 cut(s) 209, 408, 894
BseYI CCCAGC 1 cut(s) 131
BsgI GTGCAG 1 cut(s) 173
BshFI GGCC 5 cut(s) 5, 390, 512, 876, 998
BshNI GGYRCC 2 cut(s) 411, 897
BsiHKAI GWGCWC 2 cut(s) 408, 894
BsiSI CCGG 3 cut(s) 452, 618, 938
BslI CCNNNNNNNGG 2 cut(s) 383, 869
BsmAI GTCTC 7 cut(s) 74, 154, 487, 533, 560, 640, 973
BsmBI CGTCTC 1 cut(s) 533
BsnI GGCC 5 cut(s) 5, 390, 512, 876, 998
Bso31I GGTCTC 2 cut(s) 487, 973
Bsp1286I GDGCHC 3 cut(s) 209, 408, 894
Bsp13I TCCGGA 1 cut(s) 937
Bsp19I CCATGG 1 cut(s) 27
BspACI CCGC 2 cut(s) 281, 591
BspANI GGCC 5 cut(s) 5, 390, 512, 876, 998
BspCNI CTCAG 1 cut(s) 586
BspEI TCCGGA 1 cut(s) 937
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 4 cut(s) 288, 413, 774, 899
BspPI GGATC 2 cut(s) 281, 844
BspT107I GGYRCC 2 cut(s) 411, 897
BspTNI GGTCTC 2 cut(s) 487, 973
BsrI ACTGG 5 cut(s) 206, 413, 466, 692, 899
BssECI CCNNGG 5 cut(s) 27, 391, 513, 877, 999
BssNI GRCGYC 2 cut(s) 56, 542
BssT1I CCWWGG 1 cut(s) 27
Bst2UI CCWGG 7 cut(s) 165, 368, 384, 393, 651, 854, 879
Bst4CI ACNGT 2 cut(s) 211, 812
Bst6I CTCTTC 1 cut(s) 513
BstACI GRCGYC 2 cut(s) 56, 542
BstBAI YACGTR 1 cut(s) 238
BstDEI CTNAG 3 cut(s) 378, 594, 750
BstDSI CCRYGG 1 cut(s) 27
BstEII GGTNACC 2 cut(s) 370, 856
BstF5I GGATG 3 cut(s) 185, 363, 934
BstMAI GTCTC 7 cut(s) 74, 154, 487, 533, 560, 640, 973
BstMWI GCNNNNNNNGC 5 cut(s) 11, 204, 213, 260, 746
BstNI CCWGG 7 cut(s) 165, 368, 384, 393, 651, 854, 879
BstNSI RCATGY 2 cut(s) 127, 613
BstPAI GACNNNNGTC 1 cut(s) 690
BstPI GGTNACC 2 cut(s) 370, 856
BstSCI CCNGG 9 cut(s) 163, 366, 382, 391, 450, 617, 649, 852, 877
BstSLI GKGCMC 3 cut(s) 209, 408, 894
BstSNI TACGTA 1 cut(s) 238
BstV2I GAAGAC 4 cut(s) 53, 217, 536, 703
BsuRI GGCC 5 cut(s) 5, 390, 512, 876, 998
BtgI CCRYGG 1 cut(s) 27
BtrI CACGTC 2 cut(s) 88, 574
BtsCI GGATG 3 cut(s) 185, 363, 934
BtsI GCAGTG 1 cut(s) 774
BtsIMutI CAGTG 3 cut(s) 406, 774, 892
CciI TCATGA 1 cut(s) 727
Cfr13I GGNCC 2 cut(s) 389, 875
CseI GACGC 2 cut(s) 45, 550
Csp6I GTAC 3 cut(s) 239, 343, 829
CviAII CATG 7 cut(s) 28, 124, 146, 242, 610, 632, 728
CviQI GTAC 3 cut(s) 239, 343, 829
DdeI CTNAG 3 cut(s) 378, 594, 750
DrdI GACNNNNNNGTC 1 cut(s) 55
DseDI GACNNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 3 cut(s) 3, 510, 996
Eam1104I CTCTTC 1 cut(s) 513
EarI CTCTTC 1 cut(s) 513
Eco105I TACGTA 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 27
Eco31I GGTCTC 2 cut(s) 487, 973
Eco91I GGTNACC 2 cut(s) 370, 856
EcoO109I RGGNCCY 2 cut(s) 389, 875
EcoO65I GGTNACC 2 cut(s) 370, 856
EcoRII CCWGG 7 cut(s) 163, 366, 382, 391, 649, 852, 877
EcoT14I CCWWGG 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 27
Esp3I CGTCTC 1 cut(s) 533
FaeI CATG 7 cut(s) 31, 127, 149, 245, 613, 635, 731
FalI AAGNNNNNCTT 4 cut(s) 338, 370, 824, 856
FatI CATG 7 cut(s) 27, 123, 145, 241, 609, 631, 727
FbaI TGATCA 2 cut(s) 303, 789
FokI GGATG 3 cut(s) 192, 350, 921
FspBI CTAG 4 cut(s) 60, 77, 546, 563
GsaI CCCAGC 1 cut(s) 135
GsuI CTGGAG 3 cut(s) 405, 449, 633
HaeIII GGCC 5 cut(s) 5, 390, 512, 876, 998
HapII CCGG 3 cut(s) 452, 618, 938
HgaI GACGC 2 cut(s) 45, 550
Hin1I GRCGYC 2 cut(s) 56, 542
Hin1II CATG 7 cut(s) 31, 127, 149, 245, 613, 635, 731
HindIII AAGCTT 2 cut(s) 585, 866
HpaII CCGG 3 cut(s) 452, 618, 938
HphI GGTGA 9 cut(s) 52, 110, 338, 352, 382, 440, 538, 824, 868
Hpy166II GTNNAC 2 cut(s) 406, 892
Hpy188I TCNGA 2 cut(s) 333, 819
Hpy188III TCNNGA 7 cut(s) 229, 677, 715, 728, 847, 938, 970
Hpy8I GTNNAC 2 cut(s) 406, 892
Hpy99I CGWCG 4 cut(s) 11, 500, 812, 986
HpyAV CCTTC 4 cut(s) 188, 259, 317, 674
HpyCH4III ACNGT 2 cut(s) 211, 812
HpyCH4IV ACGT 7 cut(s) 9, 87, 237, 308, 573, 723, 794
HpyCH4V TGCA 3 cut(s) 190, 406, 892
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 204, 213, 260, 746
HpyF3I CTNAG 3 cut(s) 378, 594, 750
HpySE526I ACGT 7 cut(s) 9, 87, 237, 308, 573, 723, 794
Hsp92I GRCGYC 2 cut(s) 56, 542
Hsp92II CATG 7 cut(s) 31, 127, 149, 245, 613, 635, 731
Kpn2I TCCGGA 1 cut(s) 937
Ksp22I TGATCA 2 cut(s) 303, 789
LmnI GCTCC 2 cut(s) 286, 772
LweI GCATC 1 cut(s) 653
MaeI CTAG 4 cut(s) 60, 77, 546, 563
MaeII ACGT 7 cut(s) 9, 87, 237, 308, 573, 723, 794
MaeIII GTNAC 2 cut(s) 370, 856
MboII GAAGA 8 cut(s) 44, 55, 58, 217, 530, 541, 665, 703
MhlI GDGCHC 3 cut(s) 209, 408, 894
MluCI AATT 3 cut(s) 232, 429, 953
MroI TCCGGA 1 cut(s) 937
MslI CAYNNNNRTG 1 cut(s) 368
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 3 cut(s) 452, 618, 938
MspR9I CCNGG 9 cut(s) 165, 368, 384, 393, 452, 619, 651, 854, 879
MvaI CCWGG 7 cut(s) 165, 368, 384, 393, 651, 854, 879
MwoI GCNNNNNNNGC 5 cut(s) 11, 204, 213, 260, 746
NciI CCSGG 2 cut(s) 452, 619
NcoI CCATGG 1 cut(s) 27
NlaIII CATG 7 cut(s) 31, 127, 149, 245, 613, 635, 731
NlaIV GGNNCC 4 cut(s) 288, 413, 774, 899
NmeAIII GCCGAG 1 cut(s) 538
NmuCI GTSAC 2 cut(s) 370, 856
NspI RCATGY 2 cut(s) 127, 613
PagI TCATGA 1 cut(s) 727
PciI ACATGT 2 cut(s) 123, 609
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 705
PfoI TCCNGGA 1 cut(s) 649
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 2 cut(s) 123, 609
PshAI GACNNNNGTC 1 cut(s) 690
Psp6I CCWGG 7 cut(s) 163, 366, 382, 391, 649, 852, 877
PspEI GGTNACC 2 cut(s) 370, 856
PspFI CCCAGC 1 cut(s) 131
PspGI CCWGG 7 cut(s) 163, 366, 382, 391, 649, 852, 877
PspN4I GGNNCC 4 cut(s) 288, 413, 774, 899
PspPI GGNCC 2 cut(s) 389, 875
RsaI GTAC 3 cut(s) 240, 344, 830
RsaNI GTAC 3 cut(s) 239, 343, 829
RseI CAYNNNNRTG 1 cut(s) 368
Sau96I GGNCC 2 cut(s) 389, 875
ScrFI CCNGG 9 cut(s) 165, 368, 384, 393, 452, 619, 651, 854, 879
SduI GDGCHC 3 cut(s) 209, 408, 894
SfaNI GCATC 1 cut(s) 653
SmiMI CAYNNNNRTG 1 cut(s) 368
SmlI CTYRAG 2 cut(s) 416, 902
SmoI CTYRAG 2 cut(s) 416, 902
SnaBI TACGTA 1 cut(s) 238
Sse9I AATT 3 cut(s) 232, 429, 953
SsiI CCGC 2 cut(s) 281, 591
SspMI CTAG 4 cut(s) 60, 77, 546, 563
StyD4I CCNGG 9 cut(s) 163, 366, 382, 391, 450, 617, 649, 852, 877
StyI CCWWGG 1 cut(s) 27
TaaI ACNGT 2 cut(s) 211, 812
TaiI ACGT 7 cut(s) 12, 90, 240, 311, 576, 726, 797
TaqI TCGA 7 cut(s) 276, 477, 495, 807, 963, 971, 981
TasI AATT 3 cut(s) 232, 429, 953
TatI WGTACW 2 cut(s) 342, 828
TscAI CASTG 3 cut(s) 413, 774, 899
TseFI GTSAC 2 cut(s) 370, 856
Tsp45I GTSAC 2 cut(s) 370, 856
TspDTI ATGAA 3 cut(s) 350, 716, 836
TspGWI ACGGA 1 cut(s) 65
TspRI CASTG 3 cut(s) 413, 774, 899
VneI GTGCAC 2 cut(s) 404, 890
XceI RCATGY 2 cut(s) 127, 613
XcmI CCANNNNNNNNNTGG 1 cut(s) 128
XspI CTAG 4 cut(s) 60, 77, 546, 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.