MLP-like protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 116, 460 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1111 |
| AccI | GTMKAC | 2 cut(s) | 285, 652 |
| AccII | CGCG | 1 cut(s) | 105 |
| AclWI | GGATC | 2 cut(s) | 725, 738 |
| AcoI | YGGCCR | 1 cut(s) | 519 |
| AcsI | RAATTY | 1 cut(s) | 814 |
| AcyI | GRCGYC | 3 cut(s) | 174, 279, 461 |
| AdeI | CACNNNGTG | 1 cut(s) | 387 |
| AfaI | GTAC | 4 cut(s) | 47, 476, 764, 1052 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 308, 923, 1111 |
| AgsI | TTSAA | 2 cut(s) | 43, 511 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 139 |
| AjiI | CACGTC | 1 cut(s) | 430 |
| AjnI | CCWGG | 3 cut(s) | 916, 1104, 1110 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 146, 178 |
| Alw21I | GWGCWC | 1 cut(s) | 1092 |
| Alw26I | GTCTC | 1 cut(s) | 92 |
| AlwI | GGATC | 2 cut(s) | 725, 738 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1111 |
| AoxI | GGCC | 4 cut(s) | 519, 528, 926, 1107 |
| ApeKI | GCWGC | 4 cut(s) | 328, 340, 626, 720 |
| ApoI | RAATTY | 1 cut(s) | 814 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 248, 280 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 574 |
| AspLEI | GCGC | 2 cut(s) | 318, 463 |
| AspS9I | GGNCC | 3 cut(s) | 187, 926, 1108 |
| AsuC2I | CCSGG | 2 cut(s) | 479, 992 |
| AsuHPI | GGTGA | 2 cut(s) | 556, 1181 |
| AvaII | GGWCC | 1 cut(s) | 187 |
| BalI | TGGCCA | 1 cut(s) | 521 |
| BamHI | GGATCC | 1 cut(s) | 730 |
| BanI | GGYRCC | 2 cut(s) | 116, 460 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 755, 787 |
| Bbv12I | GWGCWC | 1 cut(s) | 1092 |
| BbvI | GCAGC | 4 cut(s) | 315, 327, 613, 732 |
| BccI | CCATC | 4 cut(s) | 269, 406, 488, 841 |
| BceAI | ACGGC | 5 cut(s) | 187, 304, 367, 394, 399 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 322, 356, 892, 926 |
| BciT130I | CCWGG | 3 cut(s) | 918, 1106, 1112 |
| BciVI | GTATCC | 1 cut(s) | 287 |
| BcnI | CCSGG | 2 cut(s) | 479, 992 |
| BcoDI | GTCTC | 1 cut(s) | 92 |
| BfaI | CTAG | 1 cut(s) | 645 |
| BfmI | CTRYAG | 3 cut(s) | 26, 65, 341 |
| BfoI | RGCGCY | 2 cut(s) | 319, 464 |
| BfuI | GTATCC | 1 cut(s) | 287 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 527, 536 |
| BisI | GCNGC | 9 cut(s) | 329, 341, 355, 358, 483, 540, 627, 721, 929 |
| BlsI | GCNGC | 9 cut(s) | 330, 342, 356, 359, 484, 541, 628, 722, 930 |
| Bme1390I | CCNGG | 5 cut(s) | 479, 918, 992, 1106, 1112 |
| Bme18I | GGWCC | 1 cut(s) | 187 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 139 |
| BmgBI | CACGTC | 1 cut(s) | 430 |
| BmgT120I | GGNCC | 3 cut(s) | 187, 926, 1108 |
| BmiI | GGNNCC | 4 cut(s) | 118, 271, 462, 732 |
| BmrFI | CCNGG | 5 cut(s) | 479, 918, 992, 1106, 1112 |
| BmsI | GCATC | 4 cut(s) | 234, 385, 972, 1024 |
| BpmI | CTGGAG | 1 cut(s) | 1079 |
| Bpu10I | CCTNAGC | 1 cut(s) | 14 |
| BpuEI | CTTGAG | 1 cut(s) | 1067 |
| BpuMI | CCSGG | 2 cut(s) | 479, 992 |
| BsaHI | GRCGYC | 3 cut(s) | 174, 279, 461 |
| BsaI | GGTCTC | 1 cut(s) | 92 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 458, 488, 931, 961 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 308, 923, 1111 |
| Bse1I | ACTGG | 1 cut(s) | 518 |
| Bse3DI | GCAATG | 2 cut(s) | 562, 1013 |
| BseBI | CCWGG | 3 cut(s) | 918, 1106, 1112 |
| BseGI | GGATG | 5 cut(s) | 417, 499, 504, 987, 1039 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 308, 923, 1111 |
| BseMI | GCAATG | 2 cut(s) | 562, 1013 |
| BseMII | CTCAG | 2 cut(s) | 1020, 1174 |
| BseNI | ACTGG | 1 cut(s) | 518 |
| BseRI | GAGGAG | 2 cut(s) | 647, 1082 |
| BseXI | GCAGC | 4 cut(s) | 315, 327, 613, 732 |
| BseYI | CCCAGC | 1 cut(s) | 895 |
| Bsh1236I | CGCG | 1 cut(s) | 105 |
| Bsh1285I | CGRYCG | 1 cut(s) | 309 |
| BshFI | GGCC | 4 cut(s) | 521, 530, 928, 1109 |
| BshNI | GGYRCC | 2 cut(s) | 116, 460 |
| BsiEI | CGRYCG | 1 cut(s) | 309 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1092 |
| BsiSI | CCGG | 3 cut(s) | 464, 479, 991 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 308, 923, 1111 |
| BsmAI | GTCTC | 1 cut(s) | 92 |
| BsmI | GAATGC | 1 cut(s) | 1063 |
| BsnI | GGCC | 4 cut(s) | 521, 530, 928, 1109 |
| Bso31I | GGTCTC | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1092 |
| Bsp143I | GATC | 2 cut(s) | 306, 730 |
| Bsp19I | CCATGG | 1 cut(s) | 606 |
| BspANI | GGCC | 4 cut(s) | 521, 530, 928, 1109 |
| BspCNI | CTCAG | 2 cut(s) | 1019, 1173 |
| BspFNI | CGCG | 1 cut(s) | 105 |
| BspHI | TCATGA | 1 cut(s) | 1066 |
| BspLI | GGNNCC | 4 cut(s) | 118, 271, 462, 732 |
| BspMAI | CTGCAG | 2 cut(s) | 30, 345 |
| BspPI | GGATC | 2 cut(s) | 725, 738 |
| BspT107I | GGYRCC | 2 cut(s) | 116, 460 |
| BspTNI | GGTCTC | 1 cut(s) | 92 |
| BsrDI | GCAATG | 2 cut(s) | 562, 1013 |
| BsrI | ACTGG | 1 cut(s) | 518 |
| BssMI | GATC | 2 cut(s) | 306, 730 |
| BssNAI | GTATAC | 1 cut(s) | 653 |
| BssNI | GRCGYC | 3 cut(s) | 174, 279, 461 |
| BssT1I | CCWWGG | 4 cut(s) | 183, 606, 617, 870 |
| Bst1107I | GTATAC | 1 cut(s) | 653 |
| Bst2UI | CCWGG | 3 cut(s) | 918, 1106, 1112 |
| Bst4CI | ACNGT | 1 cut(s) | 244 |
| Bst6I | CTCTTC | 3 cut(s) | 90, 870, 1047 |
| BstACI | GRCGYC | 3 cut(s) | 174, 279, 461 |
| BstC8I | GCNNGC | 8 cut(s) | 20, 326, 459, 519, 528, 705, 718, 901 |
| BstDEI | CTNAG | 3 cut(s) | 14, 1006, 1160 |
| BstDSI | CCRYGG | 2 cut(s) | 349, 606 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 921 |
| BstF5I | GGATG | 5 cut(s) | 417, 499, 504, 987, 1039 |
| BstFNI | CGCG | 1 cut(s) | 105 |
| BstH2I | RGCGCY | 2 cut(s) | 319, 464 |
| BstHHI | GCGC | 2 cut(s) | 318, 463 |
| BstKTI | GATC | 2 cut(s) | 309, 733 |
| BstMAI | GTCTC | 1 cut(s) | 92 |
| BstMBI | GATC | 2 cut(s) | 306, 730 |
| BstMCI | CGRYCG | 1 cut(s) | 309 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 276, 337, 523, 527, 536, 683, 704, 713 |
| BstNI | CCWGG | 3 cut(s) | 918, 1106, 1112 |
| BstSCI | CCNGG | 5 cut(s) | 477, 916, 990, 1104, 1110 |
| BstSFI | CTRYAG | 3 cut(s) | 26, 65, 341 |
| BstUI | CGCG | 1 cut(s) | 105 |
| BstV1I | GCAGC | 4 cut(s) | 315, 327, 613, 732 |
| BstX2I | RGATCY | 1 cut(s) | 730 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 899 |
| BstYI | RGATCY | 1 cut(s) | 730 |
| BstZ17I | GTATAC | 1 cut(s) | 653 |
| BsuI | GTATCC | 1 cut(s) | 287 |
| BsuRI | GGCC | 4 cut(s) | 521, 530, 928, 1109 |
| BtgI | CCRYGG | 2 cut(s) | 349, 606 |
| BtrI | CACGTC | 1 cut(s) | 430 |
| BtsCI | GGATG | 5 cut(s) | 417, 499, 504, 987, 1039 |
| Cac8I | GCNNGC | 8 cut(s) | 20, 326, 459, 519, 528, 705, 718, 901 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1111 |
| CciI | TCATGA | 1 cut(s) | 1066 |
| CfoI | GCGC | 2 cut(s) | 318, 463 |
| Cfr13I | GGNCC | 3 cut(s) | 187, 926, 1108 |
| CseI | GACGC | 2 cut(s) | 163, 268 |
| Csp6I | GTAC | 4 cut(s) | 46, 475, 763, 1051 |
| CviAII | CATG | 6 cut(s) | 607, 632, 852, 943, 974, 1067 |
| CviQI | GTAC | 4 cut(s) | 46, 475, 763, 1051 |
| DdeI | CTNAG | 3 cut(s) | 14, 1006, 1160 |
| DinI | GGCGCC | 1 cut(s) | 462 |
| DpnI | GATC | 2 cut(s) | 308, 732 |
| DpnII | GATC | 2 cut(s) | 306, 730 |
| DraIII | CACNNNGTG | 1 cut(s) | 387 |
| DriI | GACNNNNNGTC | 1 cut(s) | 139 |
| EaeI | YGGCCR | 1 cut(s) | 519 |
| Eam1104I | CTCTTC | 3 cut(s) | 90, 870, 1047 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 3 cut(s) | 90, 870, 1047 |
| EciI | GGCGGA | 2 cut(s) | 44, 306 |
| Eco130I | CCWWGG | 4 cut(s) | 183, 606, 617, 870 |
| Eco31I | GGTCTC | 1 cut(s) | 92 |
| Eco32I | GATATC | 1 cut(s) | 1129 |
| Eco47I | GGWCC | 1 cut(s) | 187 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 921 |
| EcoO109I | RGGNCCY | 2 cut(s) | 187, 1108 |
| EcoRII | CCWGG | 3 cut(s) | 916, 1104, 1110 |
| EcoRV | GATATC | 1 cut(s) | 1129 |
| EcoT14I | CCWWGG | 4 cut(s) | 183, 606, 617, 870 |
| EgeI | GGCGCC | 1 cut(s) | 462 |
| EheI | GGCGCC | 1 cut(s) | 462 |
| ErhI | CCWWGG | 4 cut(s) | 183, 606, 617, 870 |
| FaeI | CATG | 6 cut(s) | 610, 635, 855, 946, 977, 1070 |
| FatI | CATG | 6 cut(s) | 606, 631, 851, 942, 973, 1066 |
| FauI | CCCGC | 2 cut(s) | 110, 157 |
| FblI | GTMKAC | 2 cut(s) | 285, 652 |
| Fnu4HI | GCNGC | 9 cut(s) | 329, 341, 355, 358, 483, 540, 627, 721, 929 |
| FokI | GGATG | 5 cut(s) | 424, 506, 511, 994, 1046 |
| Fsp4HI | GCNGC | 9 cut(s) | 329, 341, 355, 358, 483, 540, 627, 721, 929 |
| FspBI | CTAG | 1 cut(s) | 645 |
| GlaI | GCGC | 2 cut(s) | 317, 462 |
| GluI | GCNGC | 9 cut(s) | 329, 341, 355, 358, 483, 540, 627, 721, 929 |
| GsaI | CCCAGC | 1 cut(s) | 899 |
| GsuI | CTGGAG | 1 cut(s) | 1079 |
| HaeII | RGCGCY | 2 cut(s) | 319, 464 |
| HaeIII | GGCC | 4 cut(s) | 521, 530, 928, 1109 |
| HapII | CCGG | 3 cut(s) | 464, 479, 991 |
| HgaI | GACGC | 2 cut(s) | 163, 268 |
| HhaI | GCGC | 2 cut(s) | 318, 463 |
| Hin1I | GRCGYC | 3 cut(s) | 174, 279, 461 |
| Hin1II | CATG | 6 cut(s) | 610, 635, 855, 946, 977, 1070 |
| Hin6I | GCGC | 2 cut(s) | 316, 461 |
| HinP1I | GCGC | 2 cut(s) | 316, 461 |
| HindIII | AAGCTT | 1 cut(s) | 16 |
| HinfI | GANTC | 3 cut(s) | 70, 257, 469 |
| HpaII | CCGG | 3 cut(s) | 464, 479, 991 |
| HphI | GGTGA | 2 cut(s) | 556, 1181 |
| Hpy166II | GTNNAC | 2 cut(s) | 286, 653 |
| Hpy188I | TCNGA | 6 cut(s) | 274, 311, 662, 799, 1009, 1163 |
| Hpy188III | TCNNGA | 7 cut(s) | 126, 370, 757, 1046, 1067, 1096, 1144 |
| Hpy8I | GTNNAC | 2 cut(s) | 286, 653 |
| Hpy99I | CGWCG | 3 cut(s) | 179, 284, 431 |
| HpyAV | CCTTC | 3 cut(s) | 559, 651, 1015 |
| HpyCH4III | ACNGT | 1 cut(s) | 244 |
| HpyCH4IV | ACGT | 1 cut(s) | 429 |
| HpyCH4V | TGCA | 6 cut(s) | 22, 28, 343, 405, 968, 1037 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 276, 337, 523, 527, 536, 683, 704, 713 |
| HpyF3I | CTNAG | 3 cut(s) | 14, 1006, 1160 |
| HpySE526I | ACGT | 1 cut(s) | 429 |
| Hsp92I | GRCGYC | 3 cut(s) | 174, 279, 461 |
| Hsp92II | CATG | 6 cut(s) | 610, 635, 855, 946, 977, 1070 |
| HspAI | GCGC | 2 cut(s) | 316, 461 |
| KasI | GGCGCC | 1 cut(s) | 460 |
| Kzo9I | GATC | 2 cut(s) | 306, 730 |
| LmnI | GCTCC | 3 cut(s) | 275, 372, 1095 |
| Lsp1109I | GCAGC | 4 cut(s) | 315, 327, 613, 732 |
| LweI | GCATC | 4 cut(s) | 234, 385, 972, 1024 |
| MaeI | CTAG | 1 cut(s) | 645 |
| MaeII | ACGT | 1 cut(s) | 429 |
| MaeIII | GTNAC | 2 cut(s) | 389, 986 |
| MalI | GATC | 2 cut(s) | 308, 732 |
| MboI | GATC | 2 cut(s) | 306, 730 |
| MboII | GAAGA | 6 cut(s) | 31, 107, 220, 763, 887, 1034 |
| MfeI | CAATTG | 1 cut(s) | 960 |
| MflI | RGATCY | 1 cut(s) | 730 |
| MhlI | GDGCHC | 1 cut(s) | 1092 |
| MlsI | TGGCCA | 1 cut(s) | 521 |
| MluCI | AATT | 4 cut(s) | 110, 814, 960, 996 |
| MluNI | TGGCCA | 1 cut(s) | 521 |
| Mly113I | GGCGCC | 1 cut(s) | 461 |
| MlyI | GAGTC | 3 cut(s) | 64, 251, 478 |
| Mox20I | TGGCCA | 1 cut(s) | 521 |
| MroXI | GAANNNNTTC | 1 cut(s) | 574 |
| MscI | TGGCCA | 1 cut(s) | 521 |
| MseI | TTAA | 3 cut(s) | 804, 935, 1083 |
| Msp20I | TGGCCA | 1 cut(s) | 521 |
| MspA1I | CMGCKG | 1 cut(s) | 899 |
| MspI | CCGG | 3 cut(s) | 464, 479, 991 |
| MspR9I | CCNGG | 5 cut(s) | 479, 918, 992, 1106, 1112 |
| MunI | CAATTG | 1 cut(s) | 960 |
| Mva1269I | GAATGC | 1 cut(s) | 1063 |
| MvaI | CCWGG | 3 cut(s) | 918, 1106, 1112 |
| MvnI | CGCG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 276, 337, 523, 527, 536, 683, 704, 713 |
| NarI | GGCGCC | 1 cut(s) | 461 |
| NciI | CCSGG | 2 cut(s) | 479, 992 |
| NcoI | CCATGG | 1 cut(s) | 606 |
| NdeII | GATC | 2 cut(s) | 306, 730 |
| NlaIII | CATG | 6 cut(s) | 610, 635, 855, 946, 977, 1070 |
| NlaIV | GGNNCC | 4 cut(s) | 118, 271, 462, 732 |
| NmeAIII | GCCGAG | 1 cut(s) | 679 |
| NmuCI | GTSAC | 1 cut(s) | 986 |
| PagI | TCATGA | 1 cut(s) | 1066 |
| PctI | GAATGC | 1 cut(s) | 1063 |
| PdmI | GAANNNNTTC | 1 cut(s) | 574 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1111 |
| PkrI | GCNGC | 9 cut(s) | 330, 342, 356, 359, 484, 541, 628, 722, 930 |
| Ple19I | CGATCG | 1 cut(s) | 309 |
| PleI | GAGTC | 3 cut(s) | 64, 251, 477 |
| PluTI | GGCGCC | 1 cut(s) | 464 |
| PpsI | GAGTC | 3 cut(s) | 64, 251, 477 |
| PpuMI | RGGWCCY | 1 cut(s) | 187 |
| Psp5II | RGGWCCY | 1 cut(s) | 187 |
| Psp6I | CCWGG | 3 cut(s) | 916, 1104, 1110 |
| PspFI | CCCAGC | 1 cut(s) | 895 |
| PspGI | CCWGG | 3 cut(s) | 916, 1104, 1110 |
| PspN4I | GGNNCC | 4 cut(s) | 118, 271, 462, 732 |
| PspPI | GGNCC | 3 cut(s) | 187, 926, 1108 |
| PspPPI | RGGWCCY | 1 cut(s) | 187 |
| PstI | CTGCAG | 2 cut(s) | 30, 345 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1111 |
| PsuI | RGATCY | 1 cut(s) | 730 |
| PvuI | CGATCG | 1 cut(s) | 309 |
| PvuII | CAGCTG | 1 cut(s) | 899 |
| RsaI | GTAC | 4 cut(s) | 47, 476, 764, 1052 |
| RsaNI | GTAC | 4 cut(s) | 46, 475, 763, 1051 |
| SaqAI | TTAA | 3 cut(s) | 804, 935, 1083 |
| SatI | GCNGC | 9 cut(s) | 329, 341, 355, 358, 483, 540, 627, 721, 929 |
| Sau3AI | GATC | 2 cut(s) | 306, 730 |
| Sau96I | GGNCC | 3 cut(s) | 187, 926, 1108 |
| SchI | GAGTC | 3 cut(s) | 64, 251, 478 |
| ScrFI | CCNGG | 5 cut(s) | 479, 918, 992, 1106, 1112 |
| SduI | GDGCHC | 1 cut(s) | 1092 |
| SfaNI | GCATC | 4 cut(s) | 234, 385, 972, 1024 |
| SfcI | CTRYAG | 3 cut(s) | 26, 65, 341 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 527 |
| SfoI | GGCGCC | 1 cut(s) | 462 |
| SinI | GGWCC | 1 cut(s) | 187 |
| SmlI | CTYRAG | 1 cut(s) | 1046 |
| SmoI | CTYRAG | 1 cut(s) | 1046 |
| Sse9I | AATT | 4 cut(s) | 110, 814, 960, 996 |
| SspDI | GGCGCC | 1 cut(s) | 460 |
| SspMI | CTAG | 1 cut(s) | 645 |
| StyD4I | CCNGG | 5 cut(s) | 477, 916, 990, 1104, 1110 |
| StyI | CCWWGG | 4 cut(s) | 183, 606, 617, 870 |
| TaaI | ACNGT | 1 cut(s) | 244 |
| TaiI | ACGT | 1 cut(s) | 432 |
| TaqI | TCGA | 2 cut(s) | 198, 588 |
| TasI | AATT | 4 cut(s) | 110, 814, 960, 996 |
| TatI | WGTACW | 1 cut(s) | 1050 |
| TauI | GCSGC | 5 cut(s) | 357, 360, 485, 542, 931 |
| Tru1I | TTAA | 3 cut(s) | 804, 935, 1083 |
| Tru9I | TTAA | 3 cut(s) | 804, 935, 1083 |
| TseFI | GTSAC | 1 cut(s) | 986 |
| TseI | GCWGC | 4 cut(s) | 328, 340, 626, 720 |
| Tsp45I | GTSAC | 1 cut(s) | 986 |
| TspDTI | ATGAA | 2 cut(s) | 763, 1055 |
| TspGWI | ACGGA | 2 cut(s) | 133, 462 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1111 |
| VpaK11BI | GGWCC | 1 cut(s) | 187 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 921 |
| XapI | RAATTY | 1 cut(s) | 814 |
| XmiI | GTMKAC | 2 cut(s) | 285, 652 |
| XmnI | GAANNNNTTC | 1 cut(s) | 574 |
| XspI | CTAG | 1 cut(s) | 645 |