(3S,6E)-nerolidol synthase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 71 - 216 | 1.5e-45 | Terpene synthase, N-terminal domain |
| Terpene_synth_C | PF03936 | 285 - 525 | 1.1e-80 | Terpene synthase family, metal binding domain |
| Terpene_syn_C_2 | PF19086 | 327 - 525 | 3.2e-52 | Terpene synthase family 2, C-terminal metal binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 227, 637 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 759, 849 |
| AclWI | GGATC | 2 cut(s) | 932, 1645 |
| AcoI | YGGCCR | 3 cut(s) | 73, 616, 720 |
| AcsI | RAATTY | 5 cut(s) | 369, 766, 837, 1142, 1197 |
| AcuI | CTGAAG | 2 cut(s) | 489, 899 |
| AfaI | GTAC | 3 cut(s) | 574, 911, 1280 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 327, 759, 849 |
| AflIII | ACRYGT | 1 cut(s) | 1329 |
| AjnI | CCWGG | 2 cut(s) | 722, 1461 |
| Alw21I | GWGCWC | 2 cut(s) | 819, 969 |
| Alw26I | GTCTC | 2 cut(s) | 439, 1721 |
| Alw44I | GTGCAC | 1 cut(s) | 815 |
| AlwI | GGATC | 2 cut(s) | 932, 1645 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1055 |
| AoxI | GGCC | 6 cut(s) | 18, 73, 616, 708, 720, 928 |
| ApaLI | GTGCAC | 1 cut(s) | 815 |
| ApeKI | GCWGC | 9 cut(s) | 91, 109, 112, 278, 565, 1149, 1258, 1261, 1412 |
| ApoI | RAATTY | 5 cut(s) | 369, 766, 837, 1142, 1197 |
| AseI | ATTAAT | 1 cut(s) | 1548 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 731, 831 |
| AspS9I | GGNCC | 3 cut(s) | 18, 805, 918 |
| AsuHPI | GGTGA | 2 cut(s) | 230, 536 |
| AvaII | GGWCC | 2 cut(s) | 805, 918 |
| BaeGI | GKGCMC | 1 cut(s) | 819 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 579, 612 |
| BalI | TGGCCA | 3 cut(s) | 75, 618, 722 |
| BanII | GRGCYC | 1 cut(s) | 969 |
| BauI | CACGAG | 1 cut(s) | 1533 |
| BbsI | GAAGAC | 2 cut(s) | 3, 534 |
| Bbv12I | GWGCWC | 2 cut(s) | 819, 969 |
| BbvCI | CCTCAGC | 1 cut(s) | 1408 |
| BbvI | GCAGC | 9 cut(s) | 99, 103, 121, 290, 577, 1136, 1248, 1270, 1424 |
| BccI | CCATC | 8 cut(s) | 627, 986, 1059, 1167, 1460, 1469, 1667, 1699 |
| BceAI | ACGGC | 2 cut(s) | 305, 1306 |
| BciT130I | CCWGG | 2 cut(s) | 724, 1463 |
| BcoDI | GTCTC | 2 cut(s) | 439, 1721 |
| BfaI | CTAG | 5 cut(s) | 207, 287, 332, 569, 1322 |
| BfmI | CTRYAG | 1 cut(s) | 1080 |
| BisI | GCNGC | 9 cut(s) | 92, 110, 113, 279, 566, 1150, 1259, 1262, 1413 |
| BlsI | GCNGC | 9 cut(s) | 93, 111, 114, 280, 567, 1151, 1260, 1263, 1414 |
| BmcAI | AGTACT | 1 cut(s) | 1280 |
| Bme1390I | CCNGG | 2 cut(s) | 724, 1463 |
| Bme18I | GGWCC | 2 cut(s) | 805, 918 |
| BmgT120I | GGNCC | 3 cut(s) | 18, 805, 918 |
| BmiI | GGNNCC | 2 cut(s) | 1024, 1178 |
| BmrFI | CCNGG | 2 cut(s) | 724, 1463 |
| BmrI | ACTGGG | 1 cut(s) | 153 |
| BmsI | GCATC | 7 cut(s) | 14, 174, 280, 307, 345, 1259, 1302 |
| BmuI | ACTGGG | 1 cut(s) | 153 |
| BpiI | GAAGAC | 2 cut(s) | 3, 534 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 676, 708, 1575, 1607 |
| BpmI | CTGGAG | 1 cut(s) | 1374 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1408 |
| BpuEI | CTTGAG | 2 cut(s) | 289, 729 |
| Bsa29I | ATCGAT | 2 cut(s) | 315, 339 |
| BsaBI | GATNNNNATC | 1 cut(s) | 654 |
| BsaJI | CCNNGG | 1 cut(s) | 921 |
| BsaWI | WCCGGW | 1 cut(s) | 807 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 327, 759, 849 |
| Bse1I | ACTGG | 2 cut(s) | 76, 159 |
| Bse3DI | GCAATG | 2 cut(s) | 135, 1225 |
| Bse8I | GATNNNNATC | 1 cut(s) | 654 |
| BseBI | CCWGG | 2 cut(s) | 724, 1463 |
| BseCI | ATCGAT | 2 cut(s) | 315, 339 |
| BseDI | CCNNGG | 1 cut(s) | 921 |
| BseGI | GGATG | 3 cut(s) | 1178, 1459, 1471 |
| BseJI | GATNNNNATC | 1 cut(s) | 654 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 327, 759, 849 |
| BseMI | GCAATG | 2 cut(s) | 135, 1225 |
| BseMII | CTCAG | 3 cut(s) | 254, 434, 1422 |
| BseNI | ACTGG | 2 cut(s) | 76, 159 |
| BseRI | GAGGAG | 2 cut(s) | 968, 1541 |
| BseSI | GKGCMC | 1 cut(s) | 819 |
| BseXI | GCAGC | 9 cut(s) | 99, 103, 121, 290, 577, 1136, 1248, 1270, 1424 |
| BsgI | GTGCAG | 1 cut(s) | 359 |
| BshFI | GGCC | 6 cut(s) | 20, 75, 618, 710, 722, 930 |
| BshVI | ATCGAT | 2 cut(s) | 315, 339 |
| BsiHKAI | GWGCWC | 2 cut(s) | 819, 969 |
| BsiSI | CCGG | 1 cut(s) | 808 |
| BslFI | GGGAC | 1 cut(s) | 1445 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 327, 759, 849 |
| BsmAI | GTCTC | 2 cut(s) | 439, 1721 |
| BsmFI | GGGAC | 1 cut(s) | 1445 |
| BsmI | GAATGC | 1 cut(s) | 280 |
| BsnI | GGCC | 6 cut(s) | 20, 75, 618, 710, 722, 930 |
| Bsp1286I | GDGCHC | 2 cut(s) | 819, 969 |
| Bsp143I | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| Bsp19I | CCATGG | 1 cut(s) | 921 |
| BspANI | GGCC | 6 cut(s) | 20, 75, 618, 710, 722, 930 |
| BspCNI | CTCAG | 3 cut(s) | 253, 435, 1421 |
| BspDI | ATCGAT | 2 cut(s) | 315, 339 |
| BspLI | GGNNCC | 2 cut(s) | 1024, 1178 |
| BspPI | GGATC | 2 cut(s) | 932, 1645 |
| BsrDI | GCAATG | 2 cut(s) | 135, 1225 |
| BsrI | ACTGG | 2 cut(s) | 76, 159 |
| BssECI | CCNNGG | 1 cut(s) | 921 |
| BssMI | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| BssSI | CACGAG | 1 cut(s) | 1533 |
| BssT1I | CCWWGG | 1 cut(s) | 921 |
| Bst2BI | CACGAG | 1 cut(s) | 1533 |
| Bst2UI | CCWGG | 2 cut(s) | 724, 1463 |
| Bst4CI | ACNGT | 1 cut(s) | 1732 |
| Bst6I | CTCTTC | 2 cut(s) | 1049, 1269 |
| BstC8I | GCNNGC | 2 cut(s) | 152, 928 |
| BstDEI | CTNAG | 4 cut(s) | 240, 443, 1408, 1498 |
| BstDSI | CCRYGG | 1 cut(s) | 921 |
| BstF5I | GGATG | 3 cut(s) | 1178, 1459, 1471 |
| BstKTI | GATC | 7 cut(s) | 315, 412, 652, 895, 940, 1190, 1653 |
| BstMAI | GTCTC | 2 cut(s) | 439, 1721 |
| BstMBI | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1674 |
| BstNI | CCWGG | 2 cut(s) | 724, 1463 |
| BstNSI | RCATGY | 1 cut(s) | 1333 |
| BstSCI | CCNGG | 2 cut(s) | 722, 1461 |
| BstSFI | CTRYAG | 1 cut(s) | 1080 |
| BstSLI | GKGCMC | 1 cut(s) | 819 |
| BstV1I | GCAGC | 9 cut(s) | 99, 103, 121, 290, 577, 1136, 1248, 1270, 1424 |
| BstV2I | GAAGAC | 2 cut(s) | 3, 534 |
| BstX2I | RGATCY | 1 cut(s) | 937 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 906 |
| BstYI | RGATCY | 1 cut(s) | 937 |
| Bsu15I | ATCGAT | 2 cut(s) | 315, 339 |
| BsuRI | GGCC | 6 cut(s) | 20, 75, 618, 710, 722, 930 |
| BsuTUI | ATCGAT | 2 cut(s) | 315, 339 |
| BtgI | CCRYGG | 1 cut(s) | 921 |
| BtsCI | GGATG | 3 cut(s) | 1178, 1459, 1471 |
| BtsI | GCAGTG | 1 cut(s) | 1450 |
| BtsIMutI | CAGTG | 2 cut(s) | 899, 1450 |
| Cac8I | GCNNGC | 2 cut(s) | 152, 928 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1055 |
| Cfr13I | GGNCC | 3 cut(s) | 18, 805, 918 |
| ClaI | ATCGAT | 2 cut(s) | 315, 339 |
| Csp6I | GTAC | 3 cut(s) | 573, 910, 1279 |
| CviAII | CATG | 9 cut(s) | 88, 452, 718, 759, 922, 1169, 1330, 1396, 1508 |
| CviQI | GTAC | 3 cut(s) | 573, 910, 1279 |
| DdeI | CTNAG | 4 cut(s) | 240, 443, 1408, 1498 |
| DpnI | GATC | 7 cut(s) | 314, 411, 651, 894, 939, 1189, 1652 |
| DpnII | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| DraI | TTTAAA | 1 cut(s) | 28 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 227, 637 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 227, 637 |
| EaeI | YGGCCR | 3 cut(s) | 73, 616, 720 |
| Eam1104I | CTCTTC | 2 cut(s) | 1049, 1269 |
| EarI | CTCTTC | 2 cut(s) | 1049, 1269 |
| Ecl136II | GAGCTC | 1 cut(s) | 967 |
| Eco130I | CCWWGG | 1 cut(s) | 921 |
| Eco147I | AGGCCT | 1 cut(s) | 930 |
| Eco24I | GRGCYC | 1 cut(s) | 969 |
| Eco32I | GATATC | 1 cut(s) | 1401 |
| Eco47I | GGWCC | 2 cut(s) | 805, 918 |
| Eco53kI | GAGCTC | 1 cut(s) | 967 |
| Eco57I | CTGAAG | 2 cut(s) | 489, 899 |
| EcoICRI | GAGCTC | 1 cut(s) | 967 |
| EcoRI | GAATTC | 1 cut(s) | 1142 |
| EcoRII | CCWGG | 2 cut(s) | 722, 1461 |
| EcoRV | GATATC | 1 cut(s) | 1401 |
| EcoT14I | CCWWGG | 1 cut(s) | 921 |
| EcoT38I | GRGCYC | 1 cut(s) | 969 |
| ErhI | CCWWGG | 1 cut(s) | 921 |
| FaeI | CATG | 9 cut(s) | 91, 455, 721, 762, 925, 1172, 1333, 1399, 1511 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 576, 608, 1097, 1129 |
| FaqI | GGGAC | 1 cut(s) | 1445 |
| FatI | CATG | 9 cut(s) | 87, 451, 717, 758, 921, 1168, 1329, 1395, 1507 |
| Fnu4HI | GCNGC | 9 cut(s) | 92, 110, 113, 279, 566, 1150, 1259, 1262, 1413 |
| FokI | GGATG | 3 cut(s) | 1185, 1466, 1478 |
| FriOI | GRGCYC | 1 cut(s) | 969 |
| Fsp4HI | GCNGC | 9 cut(s) | 92, 110, 113, 279, 566, 1150, 1259, 1262, 1413 |
| FspBI | CTAG | 5 cut(s) | 207, 287, 332, 569, 1322 |
| GluI | GCNGC | 9 cut(s) | 92, 110, 113, 279, 566, 1150, 1259, 1262, 1413 |
| GsuI | CTGGAG | 1 cut(s) | 1374 |
| HaeIII | GGCC | 6 cut(s) | 20, 75, 618, 710, 722, 930 |
| HapII | CCGG | 1 cut(s) | 808 |
| Hin1II | CATG | 9 cut(s) | 91, 455, 721, 762, 925, 1172, 1333, 1399, 1511 |
| HindIII | AAGCTT | 2 cut(s) | 558, 703 |
| HinfI | GANTC | 3 cut(s) | 688, 1210, 1425 |
| HpaII | CCGG | 1 cut(s) | 808 |
| HphI | GGTGA | 2 cut(s) | 230, 536 |
| Hpy166II | GTNNAC | 3 cut(s) | 817, 912, 1327 |
| Hpy188I | TCNGA | 8 cut(s) | 82, 243, 260, 952, 1164, 1273, 1350, 1561 |
| Hpy188III | TCNNGA | 2 cut(s) | 268, 647 |
| Hpy8I | GTNNAC | 3 cut(s) | 817, 912, 1327 |
| Hpy99I | CGWCG | 1 cut(s) | 368 |
| HpyAV | CCTTC | 6 cut(s) | 31, 293, 572, 847, 1505, 1697 |
| HpyCH4III | ACNGT | 1 cut(s) | 1732 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1674 |
| HpyF3I | CTNAG | 4 cut(s) | 240, 443, 1408, 1498 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| Hsp92II | CATG | 9 cut(s) | 91, 455, 721, 762, 925, 1172, 1333, 1399, 1511 |
| Kzo9I | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| LmnI | GCTCC | 2 cut(s) | 55, 856 |
| Lsp1109I | GCAGC | 9 cut(s) | 99, 103, 121, 290, 577, 1136, 1248, 1270, 1424 |
| LweI | GCATC | 7 cut(s) | 14, 174, 280, 307, 345, 1259, 1302 |
| MaeI | CTAG | 5 cut(s) | 207, 287, 332, 569, 1322 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MaeIII | GTNAC | 4 cut(s) | 218, 455, 639, 736 |
| MalI | GATC | 7 cut(s) | 314, 411, 651, 894, 939, 1189, 1652 |
| MboI | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| MflI | RGATCY | 1 cut(s) | 937 |
| MhlI | GDGCHC | 2 cut(s) | 819, 969 |
| MlsI | TGGCCA | 3 cut(s) | 75, 618, 722 |
| MluNI | TGGCCA | 3 cut(s) | 75, 618, 722 |
| MlyI | GAGTC | 2 cut(s) | 1219, 1419 |
| MmeI | TCCRAC | 3 cut(s) | 228, 256, 652 |
| Mox20I | TGGCCA | 3 cut(s) | 75, 618, 722 |
| MroXI | GAANNNNTTC | 2 cut(s) | 731, 831 |
| MscI | TGGCCA | 3 cut(s) | 75, 618, 722 |
| MseI | TTAA | 8 cut(s) | 27, 480, 764, 870, 1059, 1548, 1635, 1698 |
| MslI | CAYNNNNRTG | 1 cut(s) | 904 |
| Msp20I | TGGCCA | 3 cut(s) | 75, 618, 722 |
| MspA1I | CMGCKG | 3 cut(s) | 112, 1149, 1261 |
| MspI | CCGG | 1 cut(s) | 808 |
| MspR9I | CCNGG | 2 cut(s) | 724, 1463 |
| Mva1269I | GAATGC | 1 cut(s) | 280 |
| MvaI | CCWGG | 2 cut(s) | 724, 1463 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1674 |
| NcoI | CCATGG | 1 cut(s) | 921 |
| NdeII | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| NlaIII | CATG | 9 cut(s) | 91, 455, 721, 762, 925, 1172, 1333, 1399, 1511 |
| NlaIV | GGNNCC | 2 cut(s) | 1024, 1178 |
| NmuCI | GTSAC | 2 cut(s) | 218, 639 |
| NspI | RCATGY | 1 cut(s) | 1333 |
| PceI | AGGCCT | 1 cut(s) | 930 |
| PciI | ACATGT | 1 cut(s) | 1329 |
| PctI | GAATGC | 1 cut(s) | 280 |
| PdmI | GAANNNNTTC | 2 cut(s) | 731, 831 |
| PfeI | GAWTC | 1 cut(s) | 688 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 759, 849 |
| PkrI | GCNGC | 9 cut(s) | 93, 111, 114, 280, 567, 1151, 1260, 1263, 1414 |
| PleI | GAGTC | 2 cut(s) | 1218, 1419 |
| PpsI | GAGTC | 2 cut(s) | 1218, 1419 |
| PscI | ACATGT | 1 cut(s) | 1329 |
| PshBI | ATTAAT | 1 cut(s) | 1548 |
| Psp124BI | GAGCTC | 1 cut(s) | 969 |
| Psp6I | CCWGG | 2 cut(s) | 722, 1461 |
| PspGI | CCWGG | 2 cut(s) | 722, 1461 |
| PspN4I | GGNNCC | 2 cut(s) | 1024, 1178 |
| PspPI | GGNCC | 3 cut(s) | 18, 805, 918 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1055 |
| PsuI | RGATCY | 1 cut(s) | 937 |
| PvuII | CAGCTG | 3 cut(s) | 112, 1149, 1261 |
| RsaI | GTAC | 3 cut(s) | 574, 911, 1280 |
| RsaNI | GTAC | 3 cut(s) | 573, 910, 1279 |
| RseI | CAYNNNNRTG | 1 cut(s) | 904 |
| SacI | GAGCTC | 1 cut(s) | 969 |
| SaqAI | TTAA | 8 cut(s) | 27, 480, 764, 870, 1059, 1548, 1635, 1698 |
| SatI | GCNGC | 9 cut(s) | 92, 110, 113, 279, 566, 1150, 1259, 1262, 1413 |
| Sau3AI | GATC | 7 cut(s) | 312, 409, 649, 892, 937, 1187, 1650 |
| Sau96I | GGNCC | 3 cut(s) | 18, 805, 918 |
| ScaI | AGTACT | 1 cut(s) | 1280 |
| SchI | GAGTC | 2 cut(s) | 1219, 1419 |
| ScrFI | CCNGG | 2 cut(s) | 724, 1463 |
| SduI | GDGCHC | 2 cut(s) | 819, 969 |
| SfaNI | GCATC | 7 cut(s) | 14, 174, 280, 307, 345, 1259, 1302 |
| SfcI | CTRYAG | 1 cut(s) | 1080 |
| SinI | GGWCC | 2 cut(s) | 805, 918 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 904 |
| SmlI | CTYRAG | 2 cut(s) | 268, 744 |
| SmoI | CTYRAG | 2 cut(s) | 268, 744 |
| SseBI | AGGCCT | 1 cut(s) | 930 |
| SspMI | CTAG | 5 cut(s) | 207, 287, 332, 569, 1322 |
| SstI | GAGCTC | 1 cut(s) | 969 |
| StuI | AGGCCT | 1 cut(s) | 930 |
| StyD4I | CCNGG | 2 cut(s) | 722, 1461 |
| StyI | CCWWGG | 1 cut(s) | 921 |
| TaaI | ACNGT | 1 cut(s) | 1732 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TaqI | TCGA | 7 cut(s) | 315, 339, 363, 436, 658, 1011, 1423 |
| TatI | WGTACW | 1 cut(s) | 1278 |
| TfiI | GAWTC | 1 cut(s) | 688 |
| Tru1I | TTAA | 8 cut(s) | 27, 480, 764, 870, 1059, 1548, 1635, 1698 |
| Tru9I | TTAA | 8 cut(s) | 27, 480, 764, 870, 1059, 1548, 1635, 1698 |
| TscAI | CASTG | 2 cut(s) | 906, 1450 |
| TseFI | GTSAC | 2 cut(s) | 218, 639 |
| TseI | GCWGC | 9 cut(s) | 91, 109, 112, 278, 565, 1149, 1258, 1261, 1412 |
| Tsp45I | GTSAC | 2 cut(s) | 218, 639 |
| TspDTI | ATGAA | 8 cut(s) | 706, 747, 1118, 1155, 1398, 1524, 1578, 1724 |
| TspRI | CASTG | 2 cut(s) | 906, 1450 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 759, 849 |
| VneI | GTGCAC | 1 cut(s) | 815 |
| VpaK11BI | GGWCC | 2 cut(s) | 805, 918 |
| VspI | ATTAAT | 1 cut(s) | 1548 |
| XapI | RAATTY | 5 cut(s) | 369, 766, 837, 1142, 1197 |
| XceI | RCATGY | 1 cut(s) | 1333 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1366 |
| XmnI | GAANNNNTTC | 2 cut(s) | 731, 831 |
| XspI | CTAG | 5 cut(s) | 207, 287, 332, 569, 1322 |
| ZrmI | AGTACT | 1 cut(s) | 1280 |