Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Reverse (-)

45786275 .. 45788917

Gene Structure 2643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1335100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGCAAACTTTCTCCAACCTCACTCTACTTCCTCCAACGAACAACTTACTGGCGACCTTCAGGTTCGCTATGCAAAAAAATTGAAGGAATTGAAGGATGCACTCGCAAATATCGGAGAAAATGAACAATTGATTGCGGTCGACGCCGTGCAACGCCTCGGCGTTGATTATCGTTTCCAAGAGGAGATTGAAGCAATAATGAAAACGCAATATACGAGAGCTTATAACGATGAATCCAGTGATGAGCTTCGTGTGGTTTCACTTCGTTTTCGACTACTGAGACAGCAAGGTTATCATGTAACCATAGATGTGTTTAATAAGTTCAAGAACAATGAGAAACTCAAAGTCGACATAAACGGACTAGTGGGATTATATGAAGCTTCTCATATGAGTTTCCCAGGAGAAGAGGCACTTGTTGAAGCGGGAAGACGAAGCCACCAGCTTCTTACCGCTTGGATGCCAAACAATCTCGATGATCATCGAGCTTCAGCGGTAGCGTACTCATTGGAGCATCCTCATCACAAGAGCTTGACAAGATTCATGGCTAAAAACTTCTTGCATAGTTTCGAAGGAAAGGAGAATTGGGTCAATGATTTGCGGGAGCTAGGAAAACTAGAGTTCAACATGGTCGAATCTCTAATCCGAAATGAAATTCAACAAGTATCCAAGTGGTGGAAAGAACTAGGATTGACTGAGGAGTTGAAGTTTGTGAGAGACCAGCCAATTAAATGGTATACCTGGCCGATGGCATGCCTTACAGATCCAAACTTATCAGAGGAAAGGGTTGAACTCACAAAATCGATCTCTCTTGTCTACATAATTGACGATATTTTTGATGTTCATGGGACCCTCGATGAACTCATTCTCTTCACAGCTGCAGTTGAGAGATGGGACATTGACGCAACTGGTGAACTACCAAATTACATGAAGATATGTTTTAAGGCTCTTTATGACATTACCAATGAAACCAGCTACATTGTGCACAAAAAGCATGGATGGAACCCTATAGAGTCCCTTAAAAAATCGTGGGCAACATTATGCAAAGCGTTCCTACTAGAAGCGCGATGGTTTAGTTGCGGGCACTTGCCAAACACGGAAGAGTACTTGAACAATGGGCTCATCAGTTCAGGGGTGCCTGTGGTTTTAACGCATGGATTCTTCTTACTGGGTCAAGGTATAACCAAGGAAACTGTACATATTCTGGACAACCTCAACATATCTAGCCTTATATCCTCAACCGCAACGATTCTTCGGCTATGGGATGACTTCGGAAGTGCCAAGGATGAGGGCCAAGATGGATATGATGGTTCATACATAGCGTGTTACGTGAATGAAAACCAAGGTTGTTCAGACGAAGATGCACGAGCATTCGTTGTCCATAGGATTTCGGAAGAATGGAAGTTTCTCAACCAAGAATGTTTCTCTGCATCAAATCCATTTTCAGCATCTTTTACAAAACTTGCTCTTAATGTTGTTAGAATGGTCCCATTGATGTATGATTATAATTCTCAACATCGCCTTCCAAGCCTTGAGGAGAATATGAAGTCGCTGCTTTTTGATAGTTTTCTTGCACAAGGCCAAGTAACCAGCGCAGCCATTAGCCAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

537

Amino Acids

61.37

Weight (kDa)

5.31

Isoelectric Point (pI)

40.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	19 - 164	4.3e-35	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	226 - 467	3.8e-77	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	266 - 467	8.1e-51	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	225, 1503
AccB1I	GGYRCC	1 cut(s)	1132
AccB7I	CCANNNNNTGG	1 cut(s)	672
AccI	GTMKAC	4 cut(s)	141, 348, 734, 813
AccII	CGCG	1 cut(s)	1063
AciI	CCGC	7 cut(s)	137, 422, 450, 491, 598, 1077, 1239
AclWI	GGATC	1 cut(s)	755
AcoI	YGGCCR	1 cut(s)	740
AcsI	RAATTY	1 cut(s)	651
AcuI	CTGAAG	2 cut(s)	44, 471
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	3 cut(s)	500, 1103, 1194
AfiI	CCNNNNNNNGG	1 cut(s)	672
AhlI	ACTAGT	1 cut(s)	361
AjnI	CCWGG	2 cut(s)	397, 737
AjuI	GAANNNNNNNTTGG	2 cut(s)	565, 597
AluBI	AGCT	9 cut(s)	221, 247, 380, 442, 485, 528, 604, 875, 972
AluI	AGCT	9 cut(s)	221, 247, 380, 442, 485, 528, 604, 875, 972
Alw21I	GWGCWC	1 cut(s)	984
Alw26I	GTCTC	2 cut(s)	274, 708
Alw44I	GTGCAC	1 cut(s)	980
AlwI	GGATC	1 cut(s)	755
AoxI	GGCC	3 cut(s)	740, 1288, 1576
ApaLI	GTGCAC	1 cut(s)	980
ApeKI	GCWGC	3 cut(s)	875, 1549, 1592
ApoI	RAATTY	1 cut(s)	651
ArsI	GACNNNNNNTTYG	2 cut(s)	815, 847
Asp700I	GAANNNNTTC	1 cut(s)	861
AspLEI	GCGC	2 cut(s)	1063, 1592
AspS9I	GGNCC	3 cut(s)	846, 1288, 1483
AsuHPI	GGTGA	1 cut(s)	920
AsuII	TTCGAA	1 cut(s)	567
AvaII	GGWCC	2 cut(s)	846, 1483
BaeGI	GKGCMC	2 cut(s)	984, 1083
BanI	GGYRCC	1 cut(s)	1132
BanII	GRGCYC	1 cut(s)	1119
BauI	CACGAG	1 cut(s)	1362
BbsI	GAAGAC	1 cut(s)	433
Bbv12I	GWGCWC	1 cut(s)	984
BbvI	GCAGC	3 cut(s)	862, 1536, 1604
BccI	CCATC	6 cut(s)	739, 882, 990, 1059, 1289, 1298
BceAI	ACGGC	1 cut(s)	131
BciT130I	CCWGG	2 cut(s)	399, 739
BciVI	GTATCC	1 cut(s)	673
BclI	TGATCA	1 cut(s)	475
BcoDI	GTCTC	2 cut(s)	274, 708
BcuI	ACTAGT	1 cut(s)	361
BfaI	CTAG	6 cut(s)	362, 605, 614, 683, 1055, 1221
BfmI	CTRYAG	2 cut(s)	876, 1005
BfuI	GTATCC	1 cut(s)	673
BisI	GCNGC	3 cut(s)	876, 1550, 1593
BlsI	GCNGC	3 cut(s)	877, 1551, 1594
BmcAI	AGTACT	1 cut(s)	1103
Bme1390I	CCNGG	2 cut(s)	399, 739
Bme18I	GGWCC	2 cut(s)	846, 1483
BmgT120I	GGNCC	3 cut(s)	846, 1288, 1483
BmiI	GGNNCC	5 cut(s)	847, 848, 1001, 1134, 1485
BmrFI	CCNGG	2 cut(s)	399, 739
BmrI	ACTGGG	1 cut(s)	1175
BmsI	GCATC	6 cut(s)	88, 447, 520, 1348, 1436, 1454
BmuI	ACTGGG	1 cut(s)	1175
BpiI	GAAGAC	1 cut(s)	433
Bpu14I	TTCGAA	1 cut(s)	567
BpuEI	CTTGAG	1 cut(s)	1550
Bsa29I	ATCGAT	1 cut(s)	800
BsaAI	YACGTR	1 cut(s)	1327
BsaBI	GATNNNNATC	1 cut(s)	477
BsaHI	GRCGYC	1 cut(s)	144
BsaI	GGTCTC	1 cut(s)	708
BsaJI	CCNNGG	5 cut(s)	157, 397, 1182, 1278, 1339
BsaXI	ACNNNNNCTCC	2 cut(s)	689, 719
Bsc4I	CCNNNNNNNGG	1 cut(s)	672
Bse1I	ACTGG	4 cut(s)	55, 237, 910, 1170
Bse8I	GATNNNNATC	1 cut(s)	477
BseBI	CCWGG	2 cut(s)	399, 739
BseCI	ATCGAT	1 cut(s)	800
BseDI	CCNNGG	5 cut(s)	157, 397, 1182, 1278, 1339
BseGI	GGATG	6 cut(s)	103, 462, 511, 1001, 1267, 1288
BseJI	GATNNNNATC	1 cut(s)	477
BseLI	CCNNNNNNNGG	1 cut(s)	672
BseMII	CTCAG	2 cut(s)	269, 684
BseNI	ACTGG	4 cut(s)	55, 237, 910, 1170
BseRI	GAGGAG	3 cut(s)	197, 710, 1547
BseSI	GKGCMC	2 cut(s)	984, 1083
BseXI	GCAGC	3 cut(s)	862, 1536, 1604
Bsh1236I	CGCG	1 cut(s)	1063
Bsh1285I	CGRYCG	1 cut(s)	141
BshFI	GGCC	3 cut(s)	742, 1290, 1578
BshNI	GGYRCC	1 cut(s)	1132
BshVI	ATCGAT	1 cut(s)	800
BsiEI	CGRYCG	1 cut(s)	141
BsiHKAI	GWGCWC	1 cut(s)	984
BslFI	GGGAC	4 cut(s)	859, 905, 997, 1469
BslI	CCNNNNNNNGG	1 cut(s)	672
BsmAI	GTCTC	2 cut(s)	274, 708
BsmFI	GGGAC	4 cut(s)	859, 905, 997, 1469
BsmI	GAATGC	1 cut(s)	1367
BsnI	GGCC	3 cut(s)	742, 1290, 1578
Bso31I	GGTCTC	1 cut(s)	708
Bsp119I	TTCGAA	1 cut(s)	567
Bsp1286I	GDGCHC	3 cut(s)	984, 1083, 1119
Bsp1407I	TGTACA	1 cut(s)	1192
Bsp143I	GATC	3 cut(s)	475, 760, 801
BspACI	CCGC	7 cut(s)	137, 422, 450, 491, 598, 1077, 1239
BspANI	GGCC	3 cut(s)	742, 1290, 1578
BspCNI	CTCAG	2 cut(s)	270, 685
BspDI	ATCGAT	1 cut(s)	800
BspFNI	CGCG	1 cut(s)	1063
BspLI	GGNNCC	5 cut(s)	847, 848, 1001, 1134, 1485
BspMAI	CTGCAG	1 cut(s)	880
BspPI	GGATC	1 cut(s)	755
BspT104I	TTCGAA	1 cut(s)	567
BspT107I	GGYRCC	1 cut(s)	1132
BspTNI	GGTCTC	1 cut(s)	708
BsrGI	TGTACA	1 cut(s)	1192
BsrI	ACTGG	4 cut(s)	55, 237, 910, 1170
BssECI	CCNNGG	5 cut(s)	157, 397, 1182, 1278, 1339
BssMI	GATC	3 cut(s)	475, 760, 801
BssNAI	GTATAC	1 cut(s)	735
BssNI	GRCGYC	1 cut(s)	144
BssSI	CACGAG	1 cut(s)	1362
BssT1I	CCWWGG	3 cut(s)	1182, 1278, 1339
Bst1107I	GTATAC	1 cut(s)	735
Bst2BI	CACGAG	1 cut(s)	1362
Bst2UI	CCWGG	2 cut(s)	399, 739
Bst4CI	ACNGT	1 cut(s)	1192
Bst6I	CTCTTC	3 cut(s)	399, 872, 1092
BstACI	GRCGYC	1 cut(s)	144
BstAUI	TGTACA	1 cut(s)	1192
BstBAI	YACGTR	1 cut(s)	1327
BstBI	TTCGAA	1 cut(s)	567
BstC8I	GCNNGC	2 cut(s)	751, 1079
BstDEI	CTNAG	2 cut(s)	278, 693
BstF5I	GGATG	6 cut(s)	103, 462, 511, 1001, 1267, 1288
BstFNI	CGCG	1 cut(s)	1063
BstHHI	GCGC	2 cut(s)	1063, 1592
BstKTI	GATC	3 cut(s)	478, 763, 804
BstMAI	GTCTC	2 cut(s)	274, 708
BstMBI	GATC	3 cut(s)	475, 760, 801
BstMCI	CGRYCG	1 cut(s)	141
BstMWI	GCNNNNNNNGC	3 cut(s)	143, 988, 1524
BstNI	CCWGG	2 cut(s)	399, 739
BstNSI	RCATGY	1 cut(s)	753
BstSCI	CCNGG	2 cut(s)	397, 737
BstSFI	CTRYAG	2 cut(s)	876, 1005
BstSLI	GKGCMC	2 cut(s)	984, 1083
BstUI	CGCG	1 cut(s)	1063
BstV1I	GCAGC	3 cut(s)	862, 1536, 1604
BstV2I	GAAGAC	1 cut(s)	433
BstX2I	RGATCY	1 cut(s)	760
BstXI	CCANNNNNNTGG	1 cut(s)	729
BstYI	RGATCY	1 cut(s)	760
BstZ17I	GTATAC	1 cut(s)	735
Bsu15I	ATCGAT	1 cut(s)	800
BsuI	GTATCC	1 cut(s)	673
BsuRI	GGCC	3 cut(s)	742, 1290, 1578
BsuTUI	ATCGAT	1 cut(s)	800
BtgZI	GCGATG	2 cut(s)	1078, 1499
BtsCI	GGATG	6 cut(s)	103, 462, 511, 1001, 1267, 1288
BtsIMutI	CAGTG	1 cut(s)	244
Cac8I	GCNNGC	2 cut(s)	751, 1079
CfoI	GCGC	2 cut(s)	1063, 1592
Cfr13I	GGNCC	3 cut(s)	846, 1288, 1483
ClaI	ATCGAT	1 cut(s)	800
CseI	GACGC	2 cut(s)	152, 908
Csp6I	GTAC	3 cut(s)	499, 1102, 1193
CviAII	CATG	8 cut(s)	296, 541, 625, 750, 842, 925, 992, 1151
CviQI	GTAC	3 cut(s)	499, 1102, 1193
DdeI	CTNAG	2 cut(s)	278, 693
DpnI	GATC	3 cut(s)	477, 762, 803
DpnII	GATC	3 cut(s)	475, 760, 801
EaeI	YGGCCR	1 cut(s)	740
Eam1104I	CTCTTC	3 cut(s)	399, 872, 1092
EarI	CTCTTC	3 cut(s)	399, 872, 1092
Eco130I	CCWWGG	3 cut(s)	1182, 1278, 1339
Eco24I	GRGCYC	1 cut(s)	1119
Eco31I	GGTCTC	1 cut(s)	708
Eco47I	GGWCC	2 cut(s)	846, 1483
Eco57I	CTGAAG	2 cut(s)	44, 471
EcoO109I	RGGNCCY	1 cut(s)	846
EcoRII	CCWGG	2 cut(s)	397, 737
EcoT14I	CCWWGG	3 cut(s)	1182, 1278, 1339
EcoT38I	GRGCYC	1 cut(s)	1119
ErhI	CCWWGG	3 cut(s)	1182, 1278, 1339
FaeI	CATG	8 cut(s)	299, 544, 628, 753, 845, 928, 995, 1154
FalI	AAGNNNNNCTT	2 cut(s)	396, 428
FaqI	GGGAC	4 cut(s)	859, 905, 997, 1469
FatI	CATG	8 cut(s)	295, 540, 624, 749, 841, 924, 991, 1150
FauI	CCCGC	3 cut(s)	415, 591, 1070
FauNDI	CATATG	1 cut(s)	387
FbaI	TGATCA	1 cut(s)	475
FblI	GTMKAC	4 cut(s)	141, 348, 734, 813
Fnu4HI	GCNGC	3 cut(s)	876, 1550, 1593
FokI	GGATG	6 cut(s)	110, 469, 498, 1008, 1274, 1295
FriOI	GRGCYC	1 cut(s)	1119
Fsp4HI	GCNGC	3 cut(s)	876, 1550, 1593
FspBI	CTAG	6 cut(s)	362, 605, 614, 683, 1055, 1221
GlaI	GCGC	2 cut(s)	1062, 1591
GluI	GCNGC	3 cut(s)	876, 1550, 1593
HaeIII	GGCC	3 cut(s)	742, 1290, 1578
HgaI	GACGC	2 cut(s)	152, 908
HhaI	GCGC	2 cut(s)	1063, 1592
Hin1I	GRCGYC	1 cut(s)	144
Hin1II	CATG	8 cut(s)	299, 544, 628, 753, 845, 928, 995, 1154
Hin6I	GCGC	2 cut(s)	1061, 1590
HinP1I	GCGC	2 cut(s)	1061, 1590
HincII	GTYRAC	2 cut(s)	142, 349
HindII	GTYRAC	2 cut(s)	142, 349
HindIII	AAGCTT	1 cut(s)	378
HinfI	GANTC	6 cut(s)	233, 537, 632, 1010, 1155, 1246
HphI	GGTGA	1 cut(s)	920
Hpy166II	GTNNAC	6 cut(s)	142, 349, 735, 814, 911, 982
Hpy188I	TCNGA	6 cut(s)	116, 644, 775, 1271, 1351, 1390
Hpy188III	TCNNGA	3 cut(s)	325, 470, 1202
Hpy8I	GTNNAC	6 cut(s)	142, 349, 735, 814, 911, 982
Hpy99I	CGWCG	1 cut(s)	146
HpyAV	CCTTC	5 cut(s)	68, 79, 88, 563, 1529
HpyCH4III	ACNGT	1 cut(s)	1192
HpyCH4IV	ACGT	1 cut(s)	1326
HpyF10VI	GCNNNNNNNGC	3 cut(s)	143, 988, 1524
HpyF3I	CTNAG	2 cut(s)	278, 693
HpySE526I	ACGT	1 cut(s)	1326
Hsp92I	GRCGYC	1 cut(s)	144
Hsp92II	CATG	8 cut(s)	299, 544, 628, 753, 845, 928, 995, 1154
HspAI	GCGC	2 cut(s)	1061, 1590
KflI	GGGWCCC	1 cut(s)	846
Ksp22I	TGATCA	1 cut(s)	475
Kzo9I	GATC	3 cut(s)	475, 760, 801
LmnI	GCTCC	2 cut(s)	508, 601
Lsp1109I	GCAGC	3 cut(s)	862, 1536, 1604
LweI	GCATC	6 cut(s)	88, 447, 520, 1348, 1436, 1454
MaeI	CTAG	6 cut(s)	362, 605, 614, 683, 1055, 1221
MaeII	ACGT	1 cut(s)	1326
MaeIII	GTNAC	3 cut(s)	298, 1322, 1582
MalI	GATC	3 cut(s)	477, 762, 803
MboI	GATC	3 cut(s)	475, 760, 801
MboII	GAAGA	9 cut(s)	416, 438, 859, 940, 1109, 1150, 1241, 1367, 1403
MfeI	CAATTG	1 cut(s)	128
MflI	RGATCY	1 cut(s)	760
MhlI	GDGCHC	3 cut(s)	984, 1083, 1119
MluCI	AATT	9 cut(s)	80, 89, 128, 580, 651, 723, 819, 919, 1504
MlyI	GAGTC	1 cut(s)	1019
MmeI	TCCRAC	2 cut(s)	40, 60
MroXI	GAANNNNTTC	1 cut(s)	861
MseI	TTAA	6 cut(s)	315, 726, 939, 1017, 1145, 1467
MslI	CAYNNNNRTG	1 cut(s)	308
MspA1I	CMGCKG	2 cut(s)	491, 875
MspR9I	CCNGG	2 cut(s)	399, 739
MunI	CAATTG	1 cut(s)	128
Mva1269I	GAATGC	1 cut(s)	1367
MvaI	CCWGG	2 cut(s)	399, 739
MvnI	CGCG	1 cut(s)	1063
MwoI	GCNNNNNNNGC	3 cut(s)	143, 988, 1524
NdeI	CATATG	1 cut(s)	387
NdeII	GATC	3 cut(s)	475, 760, 801
NlaIII	CATG	8 cut(s)	299, 544, 628, 753, 845, 928, 995, 1154
NlaIV	GGNNCC	5 cut(s)	847, 848, 1001, 1134, 1485
NmeAIII	GCCGAG	1 cut(s)	138
NspI	RCATGY	1 cut(s)	753
NspV	TTCGAA	1 cut(s)	567
PaeI	GCATGC	1 cut(s)	753
PcsI	WCGNNNNNNNCGW	1 cut(s)	212
PctI	GAATGC	1 cut(s)	1367
PdmI	GAANNNNTTC	1 cut(s)	861
PfeI	GAWTC	5 cut(s)	233, 537, 632, 1155, 1246
PflMI	CCANNNNNTGG	1 cut(s)	672
PkrI	GCNGC	3 cut(s)	877, 1551, 1594
PleI	GAGTC	1 cut(s)	1018
PpsI	GAGTC	1 cut(s)	1018
Ppu21I	YACGTR	1 cut(s)	1327
PpuMI	RGGWCCY	1 cut(s)	846
PsiI	TTATAA	2 cut(s)	225, 1503
Psp5II	RGGWCCY	1 cut(s)	846
Psp6I	CCWGG	2 cut(s)	397, 737
PspGI	CCWGG	2 cut(s)	397, 737
PspN4I	GGNNCC	5 cut(s)	847, 848, 1001, 1134, 1485
PspPI	GGNCC	3 cut(s)	846, 1288, 1483
PspPPI	RGGWCCY	1 cut(s)	846
PstI	CTGCAG	1 cut(s)	880
PsuI	RGATCY	1 cut(s)	760
PvuII	CAGCTG	1 cut(s)	875
RsaI	GTAC	3 cut(s)	500, 1103, 1194
RsaNI	GTAC	3 cut(s)	499, 1102, 1193
RseI	CAYNNNNRTG	1 cut(s)	308
SalI	GTCGAC	2 cut(s)	140, 347
SaqAI	TTAA	6 cut(s)	315, 726, 939, 1017, 1145, 1467
SatI	GCNGC	3 cut(s)	876, 1550, 1593
Sau3AI	GATC	3 cut(s)	475, 760, 801
Sau96I	GGNCC	3 cut(s)	846, 1288, 1483
ScaI	AGTACT	1 cut(s)	1103
SchI	GAGTC	1 cut(s)	1019
ScrFI	CCNGG	2 cut(s)	399, 739
SduI	GDGCHC	3 cut(s)	984, 1083, 1119
SfaNI	GCATC	6 cut(s)	88, 447, 520, 1348, 1436, 1454
SfcI	CTRYAG	2 cut(s)	876, 1005
SfuI	TTCGAA	1 cut(s)	567
SinI	GGWCC	2 cut(s)	846, 1483
SmiMI	CAYNNNNRTG	1 cut(s)	308
SmlI	CTYRAG	1 cut(s)	1529
SmoI	CTYRAG	1 cut(s)	1529
SpeI	ACTAGT	1 cut(s)	361
SphI	GCATGC	1 cut(s)	753
Sse9I	AATT	9 cut(s)	80, 89, 128, 580, 651, 723, 819, 919, 1504
SsiI	CCGC	7 cut(s)	137, 422, 450, 491, 598, 1077, 1239
SspMI	CTAG	6 cut(s)	362, 605, 614, 683, 1055, 1221
StyD4I	CCNGG	2 cut(s)	397, 737
StyI	CCWWGG	3 cut(s)	1182, 1278, 1339
TaaI	ACNGT	1 cut(s)	1192
TaiI	ACGT	1 cut(s)	1329
TaqI	TCGA	9 cut(s)	141, 271, 348, 471, 481, 567, 630, 800, 852
TasI	AATT	9 cut(s)	80, 89, 128, 580, 651, 723, 819, 919, 1504
TatI	WGTACW	2 cut(s)	1101, 1192
TfiI	GAWTC	5 cut(s)	233, 537, 632, 1155, 1246
Tru1I	TTAA	6 cut(s)	315, 726, 939, 1017, 1145, 1467
Tru9I	TTAA	6 cut(s)	315, 726, 939, 1017, 1145, 1467
TscAI	CASTG	1 cut(s)	244
TseI	GCWGC	3 cut(s)	875, 1549, 1592
TspGWI	ACGGA	2 cut(s)	372, 1109
TspRI	CASTG	1 cut(s)	244
Van91I	CCANNNNNTGG	1 cut(s)	672
VneI	GTGCAC	1 cut(s)	980
VpaK11BI	GGWCC	2 cut(s)	846, 1483
XapI	RAATTY	1 cut(s)	651
XceI	RCATGY	1 cut(s)	753
XmiI	GTMKAC	4 cut(s)	141, 348, 734, 813
XmnI	GAANNNNTTC	1 cut(s)	861
XspI	CTAG	6 cut(s)	362, 605, 614, 683, 1055, 1221
ZrmI	AGTACT	1 cut(s)	1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.