Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Forward (+)

3066008 .. 3069838

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG041200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCATCTTCTTCTCGGGCCTTCTTTAAATTCTTCAGTCCCCAAATTTCTCCAAAAAGAATCTCACACATTGGCCACTCTAACCTCATACATCTTACAACTAAGAAGCGGCCTACTTCTCAAAAATGCGGCATTGCCCAAGATCTTAGCTTGCTTTCCAGTTCCAGTACTCCAATAGAACTGATTAGCTACGAAACTAAGCATACTAAAACTATGGATGACATTTTTGTCCAACATTCTCAGAAGTTAGAGTTATTCAGGCATGTACTGAGAAATGTAGCAGACCTAGAAGCCCTTGAAGGTTTGAATATGATCGATGCTGCTCAACGGCTAGGTATCGATTACCACTTTCAACAAGAAATCGACGAAATTCTGCACAAACAGTTGAATAGTATATCTGTTCATGGTGACCTTCATGAGGTTGCACTTCGCTTTCGACTACTGAGACAACAGGGTTACTTTGTGCCTGATGATGTGTTTAACAACTTCAAGGAAAGCAATGGGATGTTCAAGCAAGCTTTGGGTGAAGACATCAAGGGATTGATGAGCTTATATGAAGCTTCACATCTAGGAACAGAAGGAGAAGATACACTTGTTGAAGCTGGAAAATATAGTGCCCATCTGCTAAAGACCTCTTTGCCACATCTTGATCATCATCAAGCCAAAATTGTGGGCAATACATTGGGGAATCCTCATCACAAAAGCTTGGCCTCATTCATGGCTAGGAACTTTTTTGTTACTTCTCAAGGAACCAATACATGGTCAAATTTGCTAAAAGAAGTAGCAAAAACAGATTTAAGTATGGTCCAGTCTCTGTACCATAATGAAATTGTTCAAATCTCCAAATGGTGGAAGGAGCTAGGATTGGCTAAGGAACTGAAGTTTGCAAGAGACCAACCACTAAAATGGTACATTTGGTCCATGGCATGCCTAGCAGATCCAAAGTTATCAGAGGAGAGGGTTGAGCTCACAAAACCCATCTCATTTATCTATTTGATAGATGACATTTTTGATGTTTATGGAACCCTTCATGAACTCATTCTCTTCACAGAAGCTGTTAATAGAAGGTTTACATTGAGGCTATTCATTCTGTTGCAGTGGGCGAGTCTTTGCAATGCATTTTTGGTGGAAGCAAAATGGTTCGCATCTGGACAGCTGCCAAAGTCAGAAGAGTACTTGAAGAATGGCATTGTTTCTTCTGGGGTAAATGTGGTTCTTGTCCACATTTTTTTTCTCTTGGGTCAAAACATAACCAAACAGAGTGTGGAGTTGTTGAATGACACTCCAACTATTATATCGTCCACAGCAGCAATTCTTCGACTTTGGGACGACTTGGAAAGTGCAAAGGATGAGAACCAGGATGGGAATGATGGATCGTATGTAAGGTGCTACTTAGAGGAACATCAAGGCTGTTCCATTGACGAGGCGCAAGAAAAGACTGTTAATATGATTTCAGACGAATGGAAGAAACTGAACAGAGAATTGCTCTCTCCTAATCCATTTCCAGCAACATTCACTTCGGCTTCCCTTAATCTCGCAAGAATGGTCCCCCTGATGTATAGCTATGATGGCAATCAATGCCTTCCATCACTTAAAGAATATATGAAATCAATGTTGTATGAGACTGTATCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

545

Amino Acids

62.09

Weight (kDa)

6.03

Isoelectric Point (pI)

37.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	66 - 216	8.8e-44	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	285 - 355	2.4e-21	Terpene synthase family, metal binding domain
Terpene_synth_C	PF03936	366 - 490	1e-36	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	366 - 490	3.9e-31	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	227
AccB7I	CCANNNNNTGG	2 cut(s)	759, 849
AciI	CCGC	2 cut(s)	109, 129
AclWI	GGATC	2 cut(s)	932, 1381
AcoI	YGGCCR	1 cut(s)	73
AcsI	RAATTY	4 cut(s)	29, 45, 369, 766
AcuI	CTGAAG	2 cut(s)	19, 899
AfaI	GTAC	5 cut(s)	169, 267, 818, 911, 1175
AfiI	CCNNNNNNNGG	3 cut(s)	418, 759, 849
AjnI	CCWGG	1 cut(s)	1356
Alw21I	GWGCWC	1 cut(s)	969
Alw26I	GTCTC	4 cut(s)	439, 816, 885, 1616
AlwI	GGATC	2 cut(s)	932, 1381
AlwNI	CAGNNNCTG	2 cut(s)	814, 1055
Ama87I	CYCGRG	1 cut(s)	15
AoxI	GGCC	4 cut(s)	18, 73, 110, 708
ApeKI	GCWGC	3 cut(s)	320, 1156, 1307
ApoI	RAATTY	4 cut(s)	29, 45, 369, 766
Asp700I	GAANNNNTTC	2 cut(s)	831, 1038
AspLEI	GCGC	1 cut(s)	1429
AspS9I	GGNCC	4 cut(s)	18, 805, 918, 1546
AsuHPI	GGTGA	2 cut(s)	419, 536
AvaI	CYCGRG	1 cut(s)	15
AvaII	GGWCC	3 cut(s)	805, 918, 1546
BaeGI	GKGCMC	1 cut(s)	619
BaeI	ACNNNNGTAYC	2 cut(s)	579, 612
BalI	TGGCCA	1 cut(s)	75
BanII	GRGCYC	1 cut(s)	969
BbsI	GAAGAC	1 cut(s)	534
Bbv12I	GWGCWC	1 cut(s)	969
BbvI	GCAGC	3 cut(s)	307, 1143, 1319
BccI	CCATC	6 cut(s)	627, 986, 1355, 1364, 1562, 1594
BceAI	ACGGC	1 cut(s)	344
BciT130I	CCWGG	1 cut(s)	1358
BclI	TGATCA	1 cut(s)	649
BcoDI	GTCTC	4 cut(s)	439, 816, 885, 1616
BfaI	CTAG	6 cut(s)	287, 332, 569, 723, 860, 932
BglII	AGATCT	1 cut(s)	142
BisI	GCNGC	5 cut(s)	110, 130, 321, 1157, 1308
BlsI	GCNGC	5 cut(s)	111, 131, 322, 1158, 1309
BmcAI	AGTACT	2 cut(s)	169, 1175
Bme1390I	CCNGG	1 cut(s)	1358
Bme18I	GGWCC	3 cut(s)	805, 918, 1546
BmeT110I	CYCGRG	1 cut(s)	15
BmgT120I	GGNCC	4 cut(s)	18, 805, 918, 1546
BmiI	GGNNCC	3 cut(s)	751, 1024, 1548
BmrFI	CCNGG	1 cut(s)	1358
BmsI	GCATC	3 cut(s)	14, 307, 1154
BpiI	GAAGAC	1 cut(s)	534
BplI	GAGNNNNNCTC	2 cut(s)	1470, 1502
Bpu10I	CCTNAGC	1 cut(s)	870
BpuEI	CTTGAG	1 cut(s)	729
Bsa29I	ATCGAT	2 cut(s)	315, 339
BsaBI	GATNNNNATC	2 cut(s)	654, 1572
BsaI	GGTCTC	1 cut(s)	885
BsaJI	CCNNGG	1 cut(s)	921
Bsc4I	CCNNNNNNNGG	3 cut(s)	418, 759, 849
Bse1I	ACTGG	3 cut(s)	159, 165, 808
Bse3DI	GCAATG	3 cut(s)	132, 505, 1120
Bse8I	GATNNNNATC	2 cut(s)	654, 1572
BseBI	CCWGG	1 cut(s)	1358
BseCI	ATCGAT	2 cut(s)	315, 339
BseDI	CCNNGG	1 cut(s)	921
BseGI	GGATG	4 cut(s)	223, 510, 1354, 1366
BseJI	GATNNNNATC	2 cut(s)	654, 1572
BseLI	CCNNNNNNNGG	3 cut(s)	418, 759, 849
BseMI	GCAATG	3 cut(s)	132, 505, 1120
BseMII	CTCAG	3 cut(s)	254, 260, 434
BseNI	ACTGG	3 cut(s)	159, 165, 808
BseRI	GAGGAG	1 cut(s)	968
BseSI	GKGCMC	1 cut(s)	619
BseXI	GCAGC	3 cut(s)	307, 1143, 1319
BsgI	GTGCAG	1 cut(s)	359
BshFI	GGCC	4 cut(s)	20, 75, 112, 710
BshVI	ATCGAT	2 cut(s)	315, 339
BsiHKAI	GWGCWC	1 cut(s)	969
BsiHKCI	CYCGRG	1 cut(s)	15
BslFI	GGGAC	3 cut(s)	24, 1340, 1532
BslI	CCNNNNNNNGG	3 cut(s)	418, 759, 849
BsmAI	GTCTC	4 cut(s)	439, 816, 885, 1616
BsmFI	GGGAC	3 cut(s)	24, 1340, 1532
BsnI	GGCC	4 cut(s)	20, 75, 112, 710
Bso31I	GGTCTC	1 cut(s)	885
BsoBI	CYCGRG	1 cut(s)	15
Bsp1286I	GDGCHC	2 cut(s)	619, 969
Bsp143I	GATC	5 cut(s)	142, 312, 649, 937, 1373
Bsp19I	CCATGG	1 cut(s)	921
BspACI	CCGC	2 cut(s)	109, 129
BspANI	GGCC	4 cut(s)	20, 75, 112, 710
BspCNI	CTCAG	3 cut(s)	253, 261, 435
BspDI	ATCGAT	2 cut(s)	315, 339
BspHI	TCATGA	2 cut(s)	415, 1030
BspLI	GGNNCC	3 cut(s)	751, 1024, 1548
BspPI	GGATC	2 cut(s)	932, 1381
BspTNI	GGTCTC	1 cut(s)	885
BsrDI	GCAATG	3 cut(s)	132, 505, 1120
BsrI	ACTGG	3 cut(s)	159, 165, 808
BssECI	CCNNGG	1 cut(s)	921
BssMI	GATC	5 cut(s)	142, 312, 649, 937, 1373
BssT1I	CCWWGG	1 cut(s)	921
Bst2UI	CCWGG	1 cut(s)	1358
Bst4CI	ACNGT	3 cut(s)	384, 1441, 1627
Bst6I	CTCTTC	2 cut(s)	1049, 1164
BstAPI	GCANNNNNTGC	1 cut(s)	1578
BstC8I	GCNNGC	3 cut(s)	152, 516, 928
BstDEI	CTNAG	8 cut(s)	102, 146, 198, 240, 269, 443, 870, 1393
BstDSI	CCRYGG	1 cut(s)	921
BstEII	GGTNACC	1 cut(s)	407
BstENI	CCTNNNNNAGG	1 cut(s)	416
BstF5I	GGATG	4 cut(s)	223, 510, 1354, 1366
BstHHI	GCGC	1 cut(s)	1429
BstKTI	GATC	5 cut(s)	145, 315, 652, 940, 1376
BstMAI	GTCTC	4 cut(s)	439, 816, 885, 1616
BstMBI	GATC	5 cut(s)	142, 312, 649, 937, 1373
BstMWI	GCNNNNNNNGC	3 cut(s)	932, 1569, 1578
BstNI	CCWGG	1 cut(s)	1358
BstNSI	RCATGY	2 cut(s)	266, 930
BstPI	GGTNACC	1 cut(s)	407
BstSCI	CCNGG	1 cut(s)	1356
BstSLI	GKGCMC	1 cut(s)	619
BstV1I	GCAGC	3 cut(s)	307, 1143, 1319
BstV2I	GAAGAC	1 cut(s)	534
BstX2I	RGATCY	2 cut(s)	142, 937
BstXI	CCANNNNNNTGG	2 cut(s)	670, 906
BstYI	RGATCY	2 cut(s)	142, 937
Bsu15I	ATCGAT	2 cut(s)	315, 339
BsuRI	GGCC	4 cut(s)	20, 75, 112, 710
BsuTUI	ATCGAT	2 cut(s)	315, 339
BtgI	CCRYGG	1 cut(s)	921
BtsCI	GGATG	4 cut(s)	223, 510, 1354, 1366
BtsI	GCAGTG	1 cut(s)	1103
BtsIMutI	CAGTG	1 cut(s)	1103
Cac8I	GCNNGC	3 cut(s)	152, 516, 928
CaiI	CAGNNNCTG	2 cut(s)	814, 1055
CciI	TCATGA	2 cut(s)	415, 1030
CfoI	GCGC	1 cut(s)	1429
Cfr13I	GGNCC	4 cut(s)	18, 805, 918, 1546
ClaI	ATCGAT	2 cut(s)	315, 339
Csp6I	GTAC	5 cut(s)	168, 266, 817, 910, 1174
CviAII	CATG	8 cut(s)	263, 404, 416, 718, 759, 922, 927, 1031
CviQI	GTAC	5 cut(s)	168, 266, 817, 910, 1174
DdeI	CTNAG	8 cut(s)	102, 146, 198, 240, 269, 443, 870, 1393
DpnI	GATC	5 cut(s)	144, 314, 651, 939, 1375
DpnII	GATC	5 cut(s)	142, 312, 649, 937, 1373
DraI	TTTAAA	1 cut(s)	28
DrdI	GACNNNNNNGTC	1 cut(s)	227
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	1 cut(s)	73
Eam1104I	CTCTTC	2 cut(s)	1049, 1164
EarI	CTCTTC	2 cut(s)	1049, 1164
Ecl136II	GAGCTC	1 cut(s)	967
Eco130I	CCWWGG	1 cut(s)	921
Eco24I	GRGCYC	1 cut(s)	969
Eco31I	GGTCTC	1 cut(s)	885
Eco47I	GGWCC	3 cut(s)	805, 918, 1546
Eco53kI	GAGCTC	1 cut(s)	967
Eco57I	CTGAAG	2 cut(s)	19, 899
Eco88I	CYCGRG	1 cut(s)	15
Eco91I	GGTNACC	1 cut(s)	407
EcoICRI	GAGCTC	1 cut(s)	967
EcoNI	CCTNNNNNAGG	1 cut(s)	416
EcoO65I	GGTNACC	1 cut(s)	407
EcoRII	CCWGG	1 cut(s)	1356
EcoT14I	CCWWGG	1 cut(s)	921
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	1 cut(s)	969
ErhI	CCWWGG	1 cut(s)	921
FaeI	CATG	8 cut(s)	266, 407, 419, 721, 762, 925, 930, 1034
FalI	AAGNNNNNCTT	2 cut(s)	576, 608
FaqI	GGGAC	3 cut(s)	24, 1340, 1532
FatI	CATG	8 cut(s)	262, 403, 415, 717, 758, 921, 926, 1030
FbaI	TGATCA	1 cut(s)	649
Fnu4HI	GCNGC	5 cut(s)	110, 130, 321, 1157, 1308
FokI	GGATG	4 cut(s)	230, 517, 1361, 1373
FriOI	GRGCYC	1 cut(s)	969
Fsp4HI	GCNGC	5 cut(s)	110, 130, 321, 1157, 1308
FspBI	CTAG	6 cut(s)	287, 332, 569, 723, 860, 932
GlaI	GCGC	1 cut(s)	1428
GluI	GCNGC	5 cut(s)	110, 130, 321, 1157, 1308
HaeIII	GGCC	4 cut(s)	20, 75, 112, 710
HhaI	GCGC	1 cut(s)	1429
Hin1II	CATG	8 cut(s)	266, 407, 419, 721, 762, 925, 930, 1034
Hin6I	GCGC	1 cut(s)	1427
HinP1I	GCGC	1 cut(s)	1427
HindIII	AAGCTT	3 cut(s)	516, 558, 703
HinfI	GANTC	3 cut(s)	60, 688, 1105
HphI	GGTGA	2 cut(s)	419, 536
Hpy166II	GTNNAC	3 cut(s)	1071, 1222, 1302
Hpy188I	TCNGA	4 cut(s)	243, 952, 1168, 1456
Hpy188III	TCNNGA	4 cut(s)	416, 647, 1031, 1149
Hpy8I	GTNNAC	3 cut(s)	1071, 1222, 1302
Hpy99I	CGWCG	1 cut(s)	368
HpyAV	CCTTC	8 cut(s)	31, 293, 422, 572, 847, 1037, 1059, 1592
HpyCH4III	ACNGT	3 cut(s)	384, 1441, 1627
HpyCH4V	TGCA	7 cut(s)	376, 425, 887, 1096, 1113, 1118, 1343
HpyF10VI	GCNNNNNNNGC	3 cut(s)	932, 1569, 1578
HpyF3I	CTNAG	8 cut(s)	102, 146, 198, 240, 269, 443, 870, 1393
Hsp92II	CATG	8 cut(s)	266, 407, 419, 721, 762, 925, 930, 1034
HspAI	GCGC	1 cut(s)	1427
Ksp22I	TGATCA	1 cut(s)	649
Kzo9I	GATC	5 cut(s)	142, 312, 649, 937, 1373
LmnI	GCTCC	1 cut(s)	856
Lsp1109I	GCAGC	3 cut(s)	307, 1143, 1319
LweI	GCATC	3 cut(s)	14, 307, 1154
MaeI	CTAG	6 cut(s)	287, 332, 569, 723, 860, 932
MaeIII	GTNAC	3 cut(s)	407, 455, 736
MalI	GATC	5 cut(s)	144, 314, 651, 939, 1375
MboI	GATC	5 cut(s)	142, 312, 649, 937, 1373
MflI	RGATCY	2 cut(s)	142, 937
MhlI	GDGCHC	2 cut(s)	619, 969
MlsI	TGGCCA	1 cut(s)	75
MluCI	AATT	8 cut(s)	29, 45, 369, 666, 766, 828, 1311, 1481
MluNI	TGGCCA	1 cut(s)	75
MlyI	GAGTC	1 cut(s)	1114
MmeI	TCCRAC	2 cut(s)	256, 1310
Mox20I	TGGCCA	1 cut(s)	75
Mph1103I	ATGCAT	1 cut(s)	1120
MroXI	GAANNNNTTC	2 cut(s)	831, 1038
MscI	TGGCCA	1 cut(s)	75
MseI	TTAA	7 cut(s)	27, 480, 797, 1059, 1443, 1530, 1593
MslI	CAYNNNNRTG	1 cut(s)	904
Msp20I	TGGCCA	1 cut(s)	75
MspA1I	CMGCKG	1 cut(s)	1156
MspR9I	CCNGG	1 cut(s)	1358
MvaI	CCWGG	1 cut(s)	1358
MwoI	GCNNNNNNNGC	3 cut(s)	932, 1569, 1578
NcoI	CCATGG	1 cut(s)	921
NdeII	GATC	5 cut(s)	142, 312, 649, 937, 1373
NlaIII	CATG	8 cut(s)	266, 407, 419, 721, 762, 925, 930, 1034
NlaIV	GGNNCC	3 cut(s)	751, 1024, 1548
NmuCI	GTSAC	1 cut(s)	407
NsiI	ATGCAT	1 cut(s)	1120
NspI	RCATGY	2 cut(s)	266, 930
PaeI	GCATGC	1 cut(s)	930
PagI	TCATGA	2 cut(s)	415, 1030
PdmI	GAANNNNTTC	2 cut(s)	831, 1038
PfeI	GAWTC	2 cut(s)	60, 688
PflMI	CCANNNNNTGG	2 cut(s)	759, 849
PkrI	GCNGC	5 cut(s)	111, 131, 322, 1158, 1309
PleI	GAGTC	1 cut(s)	1113
PpsI	GAGTC	1 cut(s)	1113
Psp124BI	GAGCTC	1 cut(s)	969
Psp6I	CCWGG	1 cut(s)	1356
PspEI	GGTNACC	1 cut(s)	407
PspGI	CCWGG	1 cut(s)	1356
PspN4I	GGNNCC	3 cut(s)	751, 1024, 1548
PspPI	GGNCC	4 cut(s)	18, 805, 918, 1546
PsrI	GAACNNNNNNTAC	2 cut(s)	1197, 1229
PstNI	CAGNNNCTG	2 cut(s)	814, 1055
PsuI	RGATCY	2 cut(s)	142, 937
PvuII	CAGCTG	1 cut(s)	1156
RsaI	GTAC	5 cut(s)	169, 267, 818, 911, 1175
RsaNI	GTAC	5 cut(s)	168, 266, 817, 910, 1174
RseI	CAYNNNNRTG	1 cut(s)	904
SacI	GAGCTC	1 cut(s)	969
SaqAI	TTAA	7 cut(s)	27, 480, 797, 1059, 1443, 1530, 1593
SatI	GCNGC	5 cut(s)	110, 130, 321, 1157, 1308
Sau3AI	GATC	5 cut(s)	142, 312, 649, 937, 1373
Sau96I	GGNCC	4 cut(s)	18, 805, 918, 1546
ScaI	AGTACT	2 cut(s)	169, 1175
SchI	GAGTC	1 cut(s)	1114
ScrFI	CCNGG	1 cut(s)	1358
SduI	GDGCHC	2 cut(s)	619, 969
SfaNI	GCATC	3 cut(s)	14, 307, 1154
SinI	GGWCC	3 cut(s)	805, 918, 1546
SmiMI	CAYNNNNRTG	1 cut(s)	904
SmlI	CTYRAG	1 cut(s)	744
SmoI	CTYRAG	1 cut(s)	744
SphI	GCATGC	1 cut(s)	930
Sse9I	AATT	8 cut(s)	29, 45, 369, 666, 766, 828, 1311, 1481
SsiI	CCGC	2 cut(s)	109, 129
SspMI	CTAG	6 cut(s)	287, 332, 569, 723, 860, 932
SstI	GAGCTC	1 cut(s)	969
StyD4I	CCNGG	1 cut(s)	1356
StyI	CCWWGG	1 cut(s)	921
TaaI	ACNGT	3 cut(s)	384, 1441, 1627
TaqI	TCGA	5 cut(s)	315, 339, 363, 436, 1318
TasI	AATT	8 cut(s)	29, 45, 369, 666, 766, 828, 1311, 1481
TatI	WGTACW	3 cut(s)	167, 265, 1173
TauI	GCSGC	2 cut(s)	112, 132
TfiI	GAWTC	2 cut(s)	60, 688
Tru1I	TTAA	7 cut(s)	27, 480, 797, 1059, 1443, 1530, 1593
Tru9I	TTAA	7 cut(s)	27, 480, 797, 1059, 1443, 1530, 1593
TscAI	CASTG	1 cut(s)	1103
TseFI	GTSAC	1 cut(s)	407
TseI	GCWGC	3 cut(s)	320, 1156, 1307
Tsp45I	GTSAC	1 cut(s)	407
TspDTI	ATGAA	9 cut(s)	392, 404, 570, 706, 840, 1019, 1047, 1075, 1619
TspRI	CASTG	1 cut(s)	1103
Van91I	CCANNNNNTGG	2 cut(s)	759, 849
VpaK11BI	GGWCC	3 cut(s)	805, 918, 1546
XagI	CCTNNNNNAGG	1 cut(s)	416
XapI	RAATTY	4 cut(s)	29, 45, 369, 766
XceI	RCATGY	2 cut(s)	266, 930
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1261
XmnI	GAANNNNTTC	2 cut(s)	831, 1038
XspI	CTAG	6 cut(s)	287, 332, 569, 723, 860, 932
ZrmI	AGTACT	2 cut(s)	169, 1175
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.