Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Reverse (-)

45774471 .. 45776823

Gene Structure 2353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1334800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGCATTTTCTTCTCAGGCCATCTTTGCTATGTCCACTCCTCCAAATATTGCTCAAAAAATGAACCTACATCTTGGGCACTCTAATCTCATTCAGCTAGATATATCCAAACCTATGTCCACTATTCCATTAACTCCACCTTGTTTGCAGGATGACATTCGTTTCCAGCATGAACAAAAGTTGGAGGTATTCAGGAATCTATTGAGCAGAGTAGGAGAAGAAAGTTTGAACATGATCGATGCCATTCAACGTCTAGGTATCGATTACCACTTTGAAGAACAAATTGACCTAATCATATCTAGTCATGCTAATGCCCTTTCTCATCAACAAAATGACCTTCATGAAGTTTCCCTTCGATTCCGGCTTCTCAGACAACATGGTCACTTCGTGCCCGAGGATGTGTTTAACAATTTCAAGGAAAGAGAAGGAAAGTATTTTAAGCAAATATTAAACAGTGAAGAGGTCAAGGGACTGATGAGTGTGTATGAAGCTTCACAACTAAGCATGGAAGGAGAAGATGCACTTGATGAAGCTGGAAAATTGAGTGGTCATCTCCTAAACAGATCACTGTCATATCTCGGTCCTCATGAGGCCAGACTTGTGGAGAACACACTGGGGTGCCCCCATCACCAAAGCTTGGCCGCATTCATGGCCAAGAACTTTTTGCTTCCTAATTCCCAAGCTGGCATGAATAATAGATGGCTAAATATGCTACAAGAAGTGGCAAAAACGGATTTTAATTTGGTTCAGTCCCTACACCACAAGGAGATTGTTCAAATTTCCAAGTGGTGGAAAGAGCTGGGATTGACAAGGGAACTGAAATTTGCAAGAGACGAGCCAGTTAAATGGTACATTTGGTCCATGGCATGCCTAACAGATCCAAACTTGTCAGAGGAGAGGATTCAGCTCACAAAACCTATCTCATTCATCTATTTGATTGATGACATTTTTGATGTTTACGGGACGCTTGATGAACTCACTCTCTTCACTGAGGCTGTCAATAGATGGGAAATTGGTGCTATAGAGCACTTACCGGACTACATGAAGATATGTTTCGAGGCTCTCTACAATATAACGAATGAAATCAGCTGCGAGGTTTATCAAAAGCACGGGTGGAACCCGTTACATTCGTTGAAGAAAGCGTGGGGGAGTCTGTGCAATGCATTTTTAGTAGAAGCAAAATGGTTCAAATCCGGGCACTTTCCGAAGGCAGAAGACTACTTAAAGAATGGTATTGTTTCTTCTGGTGTCAATGTGGTGATGGTGCATATCTTCTTTCTCTTGGGTCAAGGTATAACCAAACAAAGTGTGGAGCTGGTGAATGAAACTCCAGCAATTGTGTCTTCCACAGCAGCAATTCTTCGGCTTTGGGACGATTTCGGAAGCGCAGAGGATGAGAATCAAAGTGGGCACGACGGGTCATATGTAAGGTGCTACTTACAAGAACATCCAGGTTCTTCCATGGAGGAAGCACAAGAAAATACAGTGAATATGATTTCAAAAGAATGGAAGAACCTGAACAAGGAACTGGTCTCTCCAAATTACCCTTTTCCGGCGACGTTCACCAACGCTTCCCTTAATCTTGCAAGAATGGTCCCGTTGATGTATAATTACGATGACAACCAGCACCTTCCATCTCTTGAGGTGTATATGAAATCCATGCTGTATGAAACTGAATCTGTGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

563

Amino Acids

64.44

Weight (kDa)

5.35

Isoelectric Point (pI)

44.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	71 - 191	1.3e-38	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	265 - 504	3.6e-85	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	307 - 504	5.7e-52	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	378
AccB1I	GGYRCC	1 cut(s)	618
AccB7I	CCANNNNNTGG	2 cut(s)	637, 789
AciI	CCGC	1 cut(s)	642
AclWI	GGATC	1 cut(s)	872
AcoI	YGGCCR	2 cut(s)	639, 651
AcsI	RAATTY	2 cut(s)	777, 821
AdeI	CACNNNGTG	1 cut(s)	388
AfaI	GTAC	2 cut(s)	851, 1685
AfiI	CCNNNNNNNGG	4 cut(s)	637, 789, 1522, 1552
AgsI	TTSAA	8 cut(s)	229, 248, 275, 415, 776, 1135, 1189, 1500
AjnI	CCWGG	1 cut(s)	1450
AleI	CACNNNNGTG	1 cut(s)	616
AluBI	AGCT	9 cut(s)	97, 491, 533, 636, 683, 799, 907, 1089, 1315
AluI	AGCT	9 cut(s)	97, 491, 533, 636, 683, 799, 907, 1089, 1315
Alw21I	GWGCWC	1 cut(s)	1029
Alw26I	GTCTC	2 cut(s)	825, 1537
AlwI	GGATC	1 cut(s)	872
Ama87I	CYCGRG	1 cut(s)	392
AoxI	GGCC	4 cut(s)	18, 591, 639, 651
ApeKI	GCWGC	2 cut(s)	1089, 1352
ApoI	RAATTY	2 cut(s)	777, 821
AspLEI	GCGC	1 cut(s)	1388
AspS9I	GGNCC	3 cut(s)	581, 858, 1594
AsuC2I	CCSGG	1 cut(s)	1195
AsuHPI	GGTGA	4 cut(s)	620, 1270, 1330, 1555
AvaI	CYCGRG	1 cut(s)	392
AvaII	GGWCC	3 cut(s)	581, 858, 1594
BaeGI	GKGCMC	5 cut(s)	81, 393, 623, 1200, 1413
BalI	TGGCCA	1 cut(s)	653
BanI	GGYRCC	1 cut(s)	618
BarI	GAAGNNNNNNTAC	2 cut(s)	1225, 1257
BbsI	GAAGAC	2 cut(s)	1221, 1335
Bbv12I	GWGCWC	1 cut(s)	1029
BbvI	GCAGC	2 cut(s)	1076, 1364
BccI	CCATC	6 cut(s)	29, 633, 693, 999, 1255, 1642
BciT130I	CCWGG	1 cut(s)	1452
BcnI	CCSGG	1 cut(s)	1195
BcoDI	GTCTC	2 cut(s)	825, 1537
BfaI	CTAG	3 cut(s)	98, 254, 300
BfmI	CTRYAG	1 cut(s)	1020
BisI	GCNGC	3 cut(s)	642, 1090, 1353
BlsI	GCNGC	3 cut(s)	643, 1091, 1354
Bme1390I	CCNGG	2 cut(s)	1195, 1452
Bme18I	GGWCC	3 cut(s)	581, 858, 1594
BmeT110I	CYCGRG	1 cut(s)	392
BmgT120I	GGNCC	3 cut(s)	581, 858, 1594
BmiI	GGNNCC	3 cut(s)	620, 1118, 1596
BmrFI	CCNGG	2 cut(s)	1195, 1452
BmrI	ACTGGG	1 cut(s)	623
BmsI	GCATC	2 cut(s)	229, 508
BmuI	ACTGGG	1 cut(s)	623
BpiI	GAAGAC	2 cut(s)	1221, 1335
BpmI	CTGGAG	1 cut(s)	1314
BpuEI	CTTGAG	1 cut(s)	1661
BpuMI	CCSGG	1 cut(s)	1195
Bsa29I	ATCGAT	2 cut(s)	237, 261
BsaBI	GATNNNNATC	1 cut(s)	1398
BsaI	GGTCTC	1 cut(s)	1537
BsaJI	CCNNGG	3 cut(s)	393, 861, 1461
BsaWI	WCCGGW	1 cut(s)	1033
Bsc4I	CCNNNNNNNGG	4 cut(s)	637, 789, 1522, 1552
Bse1I	ACTGG	3 cut(s)	618, 839, 1533
Bse3DI	GCAATG	1 cut(s)	1165
Bse8I	GATNNNNATC	1 cut(s)	1398
BseBI	CCWGG	1 cut(s)	1452
BseCI	ATCGAT	2 cut(s)	237, 261
BseDI	CCNNGG	3 cut(s)	393, 861, 1461
BseGI	GGATG	4 cut(s)	157, 403, 1399, 1447
BseJI	GATNNNNATC	1 cut(s)	1398
BseLI	CCNNNNNNNGG	4 cut(s)	637, 789, 1522, 1552
BseMI	GCAATG	1 cut(s)	1165
BseMII	CTCAG	3 cut(s)	29, 382, 981
BseNI	ACTGG	3 cut(s)	618, 839, 1533
BseRI	GAGGAG	2 cut(s)	30, 908
BseSI	GKGCMC	5 cut(s)	81, 393, 623, 1200, 1413
BseXI	GCAGC	2 cut(s)	1076, 1364
BseYI	CCCAGC	1 cut(s)	799
BshFI	GGCC	4 cut(s)	20, 593, 641, 653
BshNI	GGYRCC	1 cut(s)	618
BshVI	ATCGAT	2 cut(s)	237, 261
BsiHKAI	GWGCWC	1 cut(s)	1029
BsiHKCI	CYCGRG	1 cut(s)	392
BsiSI	CCGG	4 cut(s)	361, 1034, 1194, 1553
BslFI	GGGAC	5 cut(s)	483, 736, 976, 1385, 1580
BslI	CCNNNNNNNGG	4 cut(s)	637, 789, 1522, 1552
BsmAI	GTCTC	2 cut(s)	825, 1537
BsmBI	CGTCTC	1 cut(s)	825
BsmFI	GGGAC	5 cut(s)	483, 736, 976, 1385, 1580
BsmI	GAATGC	1 cut(s)	644
BsnI	GGCC	4 cut(s)	20, 593, 641, 653
Bso31I	GGTCTC	1 cut(s)	1537
BsoBI	CYCGRG	1 cut(s)	392
Bsp1286I	GDGCHC	6 cut(s)	81, 393, 623, 1029, 1200, 1413
Bsp143I	GATC	3 cut(s)	234, 563, 877
Bsp19I	CCATGG	2 cut(s)	861, 1461
BspACI	CCGC	1 cut(s)	642
BspANI	GGCC	4 cut(s)	20, 593, 641, 653
BspCNI	CTCAG	3 cut(s)	28, 381, 982
BspDI	ATCGAT	2 cut(s)	237, 261
BspHI	TCATGA	2 cut(s)	340, 586
BspLI	GGNNCC	3 cut(s)	620, 1118, 1596
BspPI	GGATC	1 cut(s)	872
BspT107I	GGYRCC	1 cut(s)	618
BspTNI	GGTCTC	1 cut(s)	1537
BsrDI	GCAATG	1 cut(s)	1165
BsrI	ACTGG	3 cut(s)	618, 839, 1533
BssECI	CCNNGG	3 cut(s)	393, 861, 1461
BssMI	GATC	3 cut(s)	234, 563, 877
BssT1I	CCWWGG	2 cut(s)	861, 1461
Bst2UI	CCWGG	1 cut(s)	1452
Bst4CI	ACNGT	3 cut(s)	455, 570, 1486
Bst6I	CTCTTC	2 cut(s)	453, 989
BstC8I	GCNNGC	2 cut(s)	685, 868
BstDEI	CTNAG	4 cut(s)	15, 368, 500, 990
BstDSI	CCRYGG	2 cut(s)	861, 1461
BstENI	CCTNNNNNAGG	1 cut(s)	1520
BstF5I	GGATG	4 cut(s)	157, 403, 1399, 1447
BstHHI	GCGC	1 cut(s)	1388
BstKTI	GATC	3 cut(s)	237, 566, 880
BstMAI	GTCTC	2 cut(s)	825, 1537
BstMBI	GATC	3 cut(s)	234, 563, 877
BstMWI	GCNNNNNNNGC	3 cut(s)	26, 650, 709
BstNI	CCWGG	1 cut(s)	1452
BstNSI	RCATGY	1 cut(s)	870
BstSCI	CCNGG	2 cut(s)	1193, 1450
BstSFI	CTRYAG	1 cut(s)	1020
BstSLI	GKGCMC	5 cut(s)	81, 393, 623, 1200, 1413
BstV1I	GCAGC	2 cut(s)	1076, 1364
BstV2I	GAAGAC	2 cut(s)	1221, 1335
BstX2I	RGATCY	1 cut(s)	877
BstXI	CCANNNNNNTGG	2 cut(s)	601, 846
BstYI	RGATCY	1 cut(s)	877
Bsu15I	ATCGAT	2 cut(s)	237, 261
BsuRI	GGCC	4 cut(s)	20, 593, 641, 653
BsuTUI	ATCGAT	2 cut(s)	237, 261
BtgI	CCRYGG	2 cut(s)	861, 1461
BtsCI	GGATG	4 cut(s)	157, 403, 1399, 1447
BtsIMutI	CAGTG	5 cut(s)	460, 566, 611, 987, 1491
Cac8I	GCNNGC	2 cut(s)	685, 868
CciI	TCATGA	2 cut(s)	340, 586
CfoI	GCGC	1 cut(s)	1388
Cfr13I	GGNCC	3 cut(s)	581, 858, 1594
ClaI	ATCGAT	2 cut(s)	237, 261
CseI	GACGC	1 cut(s)	973
Csp6I	GTAC	2 cut(s)	850, 1684
CspCI	CAANNNNNGTGG	2 cut(s)	126, 161
CviQI	GTAC	2 cut(s)	850, 1684
DdeI	CTNAG	4 cut(s)	15, 368, 500, 990
DpnI	GATC	3 cut(s)	236, 565, 879
DpnII	GATC	3 cut(s)	234, 563, 877
DraIII	CACNNNGTG	1 cut(s)	388
DrdI	GACNNNNNNGTC	1 cut(s)	378
DseDI	GACNNNNNNGTC	1 cut(s)	378
EaeI	YGGCCR	2 cut(s)	639, 651
Eam1104I	CTCTTC	2 cut(s)	453, 989
EarI	CTCTTC	2 cut(s)	453, 989
Eco130I	CCWWGG	2 cut(s)	861, 1461
Eco31I	GGTCTC	1 cut(s)	1537
Eco47I	GGWCC	3 cut(s)	581, 858, 1594
Eco88I	CYCGRG	1 cut(s)	392
EcoNI	CCTNNNNNAGG	1 cut(s)	1520
EcoRII	CCWGG	1 cut(s)	1450
EcoT14I	CCWWGG	2 cut(s)	861, 1461
EcoT22I	ATGCAT	1 cut(s)	1165
ErhI	CCWWGG	2 cut(s)	861, 1461
Esp3I	CGTCTC	1 cut(s)	825
FalI	AAGNNNNNCTT	4 cut(s)	336, 368, 507, 539
FaqI	GGGAC	5 cut(s)	483, 736, 976, 1385, 1580
FauNDI	CATATG	1 cut(s)	1423
Fnu4HI	GCNGC	3 cut(s)	642, 1090, 1353
FokI	GGATG	4 cut(s)	164, 410, 1406, 1434
Fsp4HI	GCNGC	3 cut(s)	642, 1090, 1353
FspBI	CTAG	3 cut(s)	98, 254, 300
GlaI	GCGC	1 cut(s)	1387
GluI	GCNGC	3 cut(s)	642, 1090, 1353
GsaI	CCCAGC	1 cut(s)	803
GsuI	CTGGAG	1 cut(s)	1314
HaeIII	GGCC	4 cut(s)	20, 593, 641, 653
HapII	CCGG	4 cut(s)	361, 1034, 1194, 1553
HgaI	GACGC	1 cut(s)	973
HhaI	GCGC	1 cut(s)	1388
Hin6I	GCGC	1 cut(s)	1386
HinP1I	GCGC	1 cut(s)	1386
HindIII	AAGCTT	2 cut(s)	489, 634
HinfI	GANTC	6 cut(s)	196, 357, 901, 1150, 1399, 1676
HpaII	CCGG	4 cut(s)	361, 1034, 1194, 1553
HphI	GGTGA	4 cut(s)	620, 1270, 1330, 1555
Hpy166II	GTNNAC	5 cut(s)	36, 120, 958, 1563, 1684
Hpy188I	TCNGA	4 cut(s)	371, 892, 1206, 1382
Hpy188III	TCNNGA	4 cut(s)	193, 341, 587, 1640
Hpy8I	GTNNAC	5 cut(s)	36, 120, 958, 1563, 1684
Hpy99I	CGWCG	2 cut(s)	1418, 1561
HpyAV	CCTTC	6 cut(s)	347, 362, 419, 503, 1201, 1640
HpyCH4III	ACNGT	3 cut(s)	455, 570, 1486
HpyCH4IV	ACGT	2 cut(s)	250, 1559
HpyCH4V	TGCA	7 cut(s)	148, 521, 827, 1158, 1163, 1267, 1586
HpyF10VI	GCNNNNNNNGC	3 cut(s)	26, 650, 709
HpyF3I	CTNAG	4 cut(s)	15, 368, 500, 990
HpySE526I	ACGT	2 cut(s)	250, 1559
HspAI	GCGC	1 cut(s)	1386
Kzo9I	GATC	3 cut(s)	234, 563, 877
LmnI	GCTCC	1 cut(s)	1312
Lsp1109I	GCAGC	2 cut(s)	1076, 1364
LweI	GCATC	2 cut(s)	229, 508
MaeI	CTAG	3 cut(s)	98, 254, 300
MaeII	ACGT	2 cut(s)	250, 1559
MaeIII	GTNAC	2 cut(s)	380, 1122
MalI	GATC	3 cut(s)	236, 565, 879
MboI	GATC	3 cut(s)	234, 563, 877
MfeI	CAATTG	1 cut(s)	1335
MflI	RGATCY	1 cut(s)	877
MhlI	GDGCHC	6 cut(s)	81, 393, 623, 1029, 1200, 1413
MlsI	TGGCCA	1 cut(s)	653
MluNI	TGGCCA	1 cut(s)	653
MlyI	GAGTC	1 cut(s)	1159
MmeI	TCCRAC	1 cut(s)	162
Mox20I	TGGCCA	1 cut(s)	653
Mph1103I	ATGCAT	1 cut(s)	1165
MscI	TGGCCA	1 cut(s)	653
MseI	TTAA	8 cut(s)	131, 405, 438, 449, 738, 843, 1223, 1578
MslI	CAYNNNNRTG	2 cut(s)	309, 616
Msp20I	TGGCCA	1 cut(s)	653
MspA1I	CMGCKG	1 cut(s)	1089
MspI	CCGG	4 cut(s)	361, 1034, 1194, 1553
MspR9I	CCNGG	2 cut(s)	1195, 1452
MunI	CAATTG	1 cut(s)	1335
Mva1269I	GAATGC	1 cut(s)	644
MvaI	CCWGG	1 cut(s)	1452
MwoI	GCNNNNNNNGC	3 cut(s)	26, 650, 709
NciI	CCSGG	1 cut(s)	1195
NcoI	CCATGG	2 cut(s)	861, 1461
NdeI	CATATG	1 cut(s)	1423
NdeII	GATC	3 cut(s)	234, 563, 877
NlaIV	GGNNCC	3 cut(s)	620, 1118, 1596
NmuCI	GTSAC	1 cut(s)	380
NsiI	ATGCAT	1 cut(s)	1165
NspI	RCATGY	1 cut(s)	870
OliI	CACNNNNGTG	1 cut(s)	616
PaeI	GCATGC	1 cut(s)	870
PagI	TCATGA	2 cut(s)	340, 586
PctI	GAATGC	1 cut(s)	644
PfeI	GAWTC	5 cut(s)	196, 357, 901, 1399, 1676
PflMI	CCANNNNNTGG	2 cut(s)	637, 789
PkrI	GCNGC	3 cut(s)	643, 1091, 1354
PleI	GAGTC	1 cut(s)	1158
PpsI	GAGTC	1 cut(s)	1158
Psp6I	CCWGG	1 cut(s)	1450
PspFI	CCCAGC	1 cut(s)	799
PspGI	CCWGG	1 cut(s)	1450
PspN4I	GGNNCC	3 cut(s)	620, 1118, 1596
PspPI	GGNCC	3 cut(s)	581, 858, 1594
PsuI	RGATCY	1 cut(s)	877
PvuII	CAGCTG	1 cut(s)	1089
RsaI	GTAC	2 cut(s)	851, 1685
RsaNI	GTAC	2 cut(s)	850, 1684
RseI	CAYNNNNRTG	2 cut(s)	309, 616
SaqAI	TTAA	8 cut(s)	131, 405, 438, 449, 738, 843, 1223, 1578
SatI	GCNGC	3 cut(s)	642, 1090, 1353
Sau3AI	GATC	3 cut(s)	234, 563, 877
Sau96I	GGNCC	3 cut(s)	581, 858, 1594
SchI	GAGTC	1 cut(s)	1159
ScrFI	CCNGG	2 cut(s)	1195, 1452
SduI	GDGCHC	6 cut(s)	81, 393, 623, 1029, 1200, 1413
SfaNI	GCATC	2 cut(s)	229, 508
SfcI	CTRYAG	1 cut(s)	1020
SinI	GGWCC	3 cut(s)	581, 858, 1594
SmiMI	CAYNNNNRTG	2 cut(s)	309, 616
SmlI	CTYRAG	1 cut(s)	1640
SmoI	CTYRAG	1 cut(s)	1640
SphI	GCATGC	1 cut(s)	870
SsiI	CCGC	1 cut(s)	642
SspI	AATATT	2 cut(s)	49, 447
SspMI	CTAG	3 cut(s)	98, 254, 300
StyD4I	CCNGG	2 cut(s)	1193, 1450
StyI	CCWWGG	2 cut(s)	861, 1461
TaaI	ACNGT	3 cut(s)	455, 570, 1486
TaiI	ACGT	2 cut(s)	253, 1562
TaqI	TCGA	4 cut(s)	237, 261, 355, 1056
TaqII	GACCGA	1 cut(s)	569
TatI	WGTACW	1 cut(s)	1683
TauI	GCSGC	1 cut(s)	644
TfiI	GAWTC	5 cut(s)	196, 357, 901, 1399, 1676
Tru1I	TTAA	8 cut(s)	131, 405, 438, 449, 738, 843, 1223, 1578
Tru9I	TTAA	8 cut(s)	131, 405, 438, 449, 738, 843, 1223, 1578
TscAI	CASTG	5 cut(s)	460, 573, 618, 994, 1491
TseFI	GTSAC	1 cut(s)	380
TseI	GCWGC	2 cut(s)	1089, 1352
Tsp45I	GTSAC	1 cut(s)	380
TspGWI	ACGGA	1 cut(s)	746
TspRI	CASTG	5 cut(s)	460, 573, 618, 994, 1491
Van91I	CCANNNNNTGG	2 cut(s)	637, 789
VpaK11BI	GGWCC	3 cut(s)	581, 858, 1594
XagI	CCTNNNNNAGG	1 cut(s)	1520
XapI	RAATTY	2 cut(s)	777, 821
XceI	RCATGY	1 cut(s)	870
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1306
XspI	CTAG	3 cut(s)	98, 254, 300
Zsp2I	ATGCAT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.