Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Forward (+)

3442011 .. 3444238

Gene Structure 2228 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031257

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGCATCTTCTTCTCGGGCCTTCTTTAAAATCTTCAATCCCCAAATTTCTCCAAAAAGAATCTCACATATTGGCCACTCTAACCTCGTACATCTTACACCTAAGAAGCGGTCTACTTCTCAAAAATGCTGCATTGCCCAAGATCTTAGCTTGCTTTCCAGTTCCAGTACTCCAATAGAACTGATTAGCTATGAAACTAAGCATACTAAAACTATGGATGACATTTTCGTCCAACATTCTCAGAAGTTGGAGCTATTCAAGCATGTAATGAGAAATGTAGTAGACCTAGAAGCCCTTGAAGGTTTGAATATGATCGATGCTGCTCAACGTGTAGGTATCGATTACCACTTTCAACAAGAAATCGACGAAATTCTGCACCAACAGATGAATAGTATATATGTTCATGGTGACCTTCATGAGGTTGCACTTCGCTTTCGACTACTGAGACAACAGGGTTACTTTGTGCCTGATGATATGTTTAACAACTTCAAGGAAAGCAATGGGATGTTCAAGCAAGCTTTGGGTGAAGACATCAAGGGATTGATGAGCTTATATGAAGCTTCACATCTAGGTACAGAAGGAGAAGATACACTTGTTGAAGCTGGAAAATATAGTGCCAATCTGTTAAAGAAATCTTTGCCACATCTTGATCATCATCAAGCCAGAATTGTGGGCAATACATTGGGGAATCCTCATCACAAAAGCTTGGCCTCATTCATGGCCAGAAACTTTTTTGTTACTTCTCAAGGAACCAATACATGGTCAAATTTGCTAAAGGAAGTAGCAAAAACAGATTTCACTATGGTCCAGTCTCTGTACCAGAATGAAATTGTTCAAATCTCCAAATGGTGGAAGGAGCTAGGATTGTCTAAGGAACTGAAGTTTGCAAGAGACCAACCACTAAAATGGTACATTTGGTCCATGGCATGCCTAACAGATCCAAAGTTATCAGAGGAGAGGGTTGAGCTCACAAAACCCATCTCATTTATCTATTTGATAGATGACATTTTTGATGTTTATGGAACCCTTCATGAACTCATTCTCTTCACAGAAGCTGTTAATAGATGGGATATTGCTGCTATAGACCATTTACCAGACTACATGAAGATATGCTTCAAGGCTCTCTATGATATGACTAATGAAATCAGCTGCAAGGTCTATAAGAAGCATGGACGGAACCCCTTGCAATCTTTGAAAAAGACGTGGTCGAGTCTTTGCAATGCATTTTTGGTGGAAGCAAAATGGTTTGCATCTGGGCAGCTACCAAAGTCAGAAGAGTACTTGAAGAATGGCATTGTTTCTTCTGGGGTAAATGTGGTTCTAGTCCACATTTTTTTTCTCTTGGGTCAAAACATAACCAAACAGAGTGTGGAGTTGTTAAATGACACTCCAACTATTATATCATCCACAGCAGCAATTCTTCGACTTTGGGACGACTTGGGAAGTGCAAAGGATGAGAACCAGGATGGGAACGATGGTTCGTATGTAAGGTGCTACTTAGAGGAACATCAAGGCTGTTCCATTGATGAGGCGCGAGAAAAGACTATTAATATGATTTCAGACGAATGGAAGAAACTGAACAGAGAATTGCTTTCTCCAAATCCATTTCCAGCAACATTCACTTCAGCTTCCCTTAATCTCGCAAGAATGGTCCCTTTGATGTATAGCTATGATGGCAACCAATGCCTTCCATCACTTGACGAGTATATGAAATCAATGTTGTATGAGACTGTGTCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

581

Amino Acids

66.33

Weight (kDa)

6.1

Isoelectric Point (pI)

34.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	66 - 215	8e-43	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	285 - 525	3e-85	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	327 - 525	1.9e-54	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	227
AccB7I	CCANNNNNTGG	2 cut(s)	759, 849
AccI	GTMKAC	2 cut(s)	113, 282
AccII	CGCG	1 cut(s)	1534
AciI	CCGC	1 cut(s)	109
AclWI	GGATC	1 cut(s)	932
AcoI	YGGCCR	2 cut(s)	73, 720
AcsI	RAATTY	3 cut(s)	45, 369, 766
AcuI	CTGAAG	2 cut(s)	899, 1608
AfaI	GTAC	6 cut(s)	90, 169, 574, 818, 911, 1280
AfiI	CCNNNNNNNGG	3 cut(s)	418, 759, 849
AflIII	ACRYGT	1 cut(s)	328
AjiI	CACGTC	1 cut(s)	1203
AjnI	CCWGG	1 cut(s)	1461
AloI	GAACNNNNNNTCC	2 cut(s)	1462, 1494
Alw21I	GWGCWC	1 cut(s)	969
Alw26I	GTCTC	4 cut(s)	439, 816, 885, 1721
AlwI	GGATC	1 cut(s)	932
AlwNI	CAGNNNCTG	2 cut(s)	814, 1055
Ama87I	CYCGRG	1 cut(s)	15
AoxI	GGCC	4 cut(s)	18, 73, 708, 720
ApeKI	GCWGC	6 cut(s)	129, 320, 1076, 1149, 1258, 1412
ApoI	RAATTY	3 cut(s)	45, 369, 766
AseI	ATTAAT	1 cut(s)	1548
Asp700I	GAANNNNTTC	2 cut(s)	831, 1038
AspLEI	GCGC	1 cut(s)	1534
AspS9I	GGNCC	4 cut(s)	18, 805, 918, 1651
AsuHPI	GGTGA	2 cut(s)	419, 536
AvaI	CYCGRG	1 cut(s)	15
AvaII	GGWCC	3 cut(s)	805, 918, 1651
BaeI	ACNNNNGTAYC	2 cut(s)	579, 612
BalI	TGGCCA	2 cut(s)	75, 722
BanII	GRGCYC	1 cut(s)	969
BbsI	GAAGAC	1 cut(s)	534
Bbv12I	GWGCWC	1 cut(s)	969
BbvI	GCAGC	6 cut(s)	116, 307, 1063, 1136, 1270, 1424
BccI	CCATC	6 cut(s)	986, 1059, 1460, 1469, 1667, 1699
BciT130I	CCWGG	1 cut(s)	1463
BclI	TGATCA	1 cut(s)	649
BcoDI	GTCTC	4 cut(s)	439, 816, 885, 1721
BfaI	CTAG	4 cut(s)	287, 569, 860, 1322
BfmI	CTRYAG	1 cut(s)	1080
BglII	AGATCT	1 cut(s)	142
BisI	GCNGC	6 cut(s)	130, 321, 1077, 1150, 1259, 1413
BlsI	GCNGC	6 cut(s)	131, 322, 1078, 1151, 1260, 1414
BmcAI	AGTACT	2 cut(s)	169, 1280
Bme1390I	CCNGG	1 cut(s)	1463
Bme18I	GGWCC	3 cut(s)	805, 918, 1651
BmeT110I	CYCGRG	1 cut(s)	15
BmgBI	CACGTC	1 cut(s)	1203
BmgT120I	GGNCC	4 cut(s)	18, 805, 918, 1651
BmiI	GGNNCC	4 cut(s)	751, 1024, 1178, 1653
BmrFI	CCNGG	1 cut(s)	1463
BmsI	GCATC	3 cut(s)	14, 307, 1259
BpiI	GAAGAC	1 cut(s)	534
BpuEI	CTTGAG	1 cut(s)	729
Bsa29I	ATCGAT	2 cut(s)	315, 339
BsaBI	GATNNNNATC	1 cut(s)	654
BsaI	GGTCTC	1 cut(s)	885
BsaJI	CCNNGG	1 cut(s)	921
Bsc4I	CCNNNNNNNGG	3 cut(s)	418, 759, 849
Bse1I	ACTGG	3 cut(s)	159, 165, 808
Bse3DI	GCAATG	3 cut(s)	132, 505, 1225
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	1 cut(s)	1463
BseCI	ATCGAT	2 cut(s)	315, 339
BseDI	CCNNGG	1 cut(s)	921
BseGI	GGATG	5 cut(s)	223, 510, 1403, 1459, 1471
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	3 cut(s)	418, 759, 849
BseMI	GCAATG	3 cut(s)	132, 505, 1225
BseMII	CTCAG	2 cut(s)	254, 434
BseNI	ACTGG	3 cut(s)	159, 165, 808
BseRI	GAGGAG	1 cut(s)	968
BseXI	GCAGC	6 cut(s)	116, 307, 1063, 1136, 1270, 1424
BsgI	GTGCAG	1 cut(s)	359
Bsh1236I	CGCG	1 cut(s)	1534
BshFI	GGCC	4 cut(s)	20, 75, 710, 722
BshVI	ATCGAT	2 cut(s)	315, 339
BsiHKAI	GWGCWC	1 cut(s)	969
BsiHKCI	CYCGRG	1 cut(s)	15
BslFI	GGGAC	2 cut(s)	1445, 1637
BslI	CCNNNNNNNGG	3 cut(s)	418, 759, 849
BsmAI	GTCTC	4 cut(s)	439, 816, 885, 1721
BsmFI	GGGAC	2 cut(s)	1445, 1637
BsnI	GGCC	4 cut(s)	20, 75, 710, 722
Bso31I	GGTCTC	1 cut(s)	885
BsoBI	CYCGRG	1 cut(s)	15
Bsp1286I	GDGCHC	1 cut(s)	969
Bsp143I	GATC	4 cut(s)	142, 312, 649, 937
Bsp19I	CCATGG	1 cut(s)	921
BspACI	CCGC	1 cut(s)	109
BspANI	GGCC	4 cut(s)	20, 75, 710, 722
BspCNI	CTCAG	2 cut(s)	253, 435
BspDI	ATCGAT	2 cut(s)	315, 339
BspFNI	CGCG	1 cut(s)	1534
BspHI	TCATGA	2 cut(s)	415, 1030
BspLI	GGNNCC	4 cut(s)	751, 1024, 1178, 1653
BspPI	GGATC	1 cut(s)	932
BspTNI	GGTCTC	1 cut(s)	885
BsrDI	GCAATG	3 cut(s)	132, 505, 1225
BsrI	ACTGG	3 cut(s)	159, 165, 808
BssECI	CCNNGG	1 cut(s)	921
BssMI	GATC	4 cut(s)	142, 312, 649, 937
BssT1I	CCWWGG	1 cut(s)	921
Bst2UI	CCWGG	1 cut(s)	1463
Bst4CI	ACNGT	1 cut(s)	1732
Bst6I	CTCTTC	2 cut(s)	1049, 1269
BstAPI	GCANNNNNTGC	1 cut(s)	1683
BstC8I	GCNNGC	3 cut(s)	152, 516, 928
BstDEI	CTNAG	7 cut(s)	102, 146, 198, 240, 443, 870, 1498
BstDSI	CCRYGG	1 cut(s)	921
BstEII	GGTNACC	1 cut(s)	407
BstENI	CCTNNNNNAGG	1 cut(s)	416
BstF5I	GGATG	5 cut(s)	223, 510, 1403, 1459, 1471
BstFNI	CGCG	1 cut(s)	1534
BstHHI	GCGC	1 cut(s)	1534
BstKTI	GATC	4 cut(s)	145, 315, 652, 940
BstMAI	GTCTC	4 cut(s)	439, 816, 885, 1721
BstMBI	GATC	4 cut(s)	142, 312, 649, 937
BstMWI	GCNNNNNNNGC	3 cut(s)	259, 1674, 1683
BstNI	CCWGG	1 cut(s)	1463
BstNSI	RCATGY	2 cut(s)	266, 930
BstPI	GGTNACC	1 cut(s)	407
BstSCI	CCNGG	1 cut(s)	1461
BstSFI	CTRYAG	1 cut(s)	1080
BstUI	CGCG	1 cut(s)	1534
BstV1I	GCAGC	6 cut(s)	116, 307, 1063, 1136, 1270, 1424
BstV2I	GAAGAC	1 cut(s)	534
BstX2I	RGATCY	2 cut(s)	142, 937
BstXI	CCANNNNNNTGG	2 cut(s)	670, 906
BstYI	RGATCY	2 cut(s)	142, 937
Bsu15I	ATCGAT	2 cut(s)	315, 339
BsuRI	GGCC	4 cut(s)	20, 75, 710, 722
BsuTUI	ATCGAT	2 cut(s)	315, 339
BtgI	CCRYGG	1 cut(s)	921
BtrI	CACGTC	1 cut(s)	1203
BtsCI	GGATG	5 cut(s)	223, 510, 1403, 1459, 1471
Cac8I	GCNNGC	3 cut(s)	152, 516, 928
CaiI	CAGNNNCTG	2 cut(s)	814, 1055
CciI	TCATGA	2 cut(s)	415, 1030
CfoI	GCGC	1 cut(s)	1534
Cfr13I	GGNCC	4 cut(s)	18, 805, 918, 1651
ClaI	ATCGAT	2 cut(s)	315, 339
Csp6I	GTAC	6 cut(s)	89, 168, 573, 817, 910, 1279
CviQI	GTAC	6 cut(s)	89, 168, 573, 817, 910, 1279
DdeI	CTNAG	7 cut(s)	102, 146, 198, 240, 443, 870, 1498
DpnI	GATC	4 cut(s)	144, 314, 651, 939
DpnII	GATC	4 cut(s)	142, 312, 649, 937
DraI	TTTAAA	1 cut(s)	28
DrdI	GACNNNNNNGTC	1 cut(s)	227
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	2 cut(s)	73, 720
Eam1104I	CTCTTC	2 cut(s)	1049, 1269
EarI	CTCTTC	2 cut(s)	1049, 1269
Ecl136II	GAGCTC	1 cut(s)	967
Eco130I	CCWWGG	1 cut(s)	921
Eco24I	GRGCYC	1 cut(s)	969
Eco31I	GGTCTC	1 cut(s)	885
Eco47I	GGWCC	3 cut(s)	805, 918, 1651
Eco53kI	GAGCTC	1 cut(s)	967
Eco57I	CTGAAG	2 cut(s)	899, 1608
Eco88I	CYCGRG	1 cut(s)	15
Eco91I	GGTNACC	1 cut(s)	407
EcoICRI	GAGCTC	1 cut(s)	967
EcoNI	CCTNNNNNAGG	1 cut(s)	416
EcoO65I	GGTNACC	1 cut(s)	407
EcoRII	CCWGG	1 cut(s)	1461
EcoT14I	CCWWGG	1 cut(s)	921
EcoT22I	ATGCAT	1 cut(s)	1225
EcoT38I	GRGCYC	1 cut(s)	969
ErhI	CCWWGG	1 cut(s)	921
FalI	AAGNNNNNCTT	4 cut(s)	576, 608, 1097, 1129
FaqI	GGGAC	2 cut(s)	1445, 1637
FbaI	TGATCA	1 cut(s)	649
FblI	GTMKAC	2 cut(s)	113, 282
Fnu4HI	GCNGC	6 cut(s)	130, 321, 1077, 1150, 1259, 1413
FokI	GGATG	5 cut(s)	230, 517, 1390, 1466, 1478
FriOI	GRGCYC	1 cut(s)	969
Fsp4HI	GCNGC	6 cut(s)	130, 321, 1077, 1150, 1259, 1413
FspBI	CTAG	4 cut(s)	287, 569, 860, 1322
GlaI	GCGC	1 cut(s)	1533
GluI	GCNGC	6 cut(s)	130, 321, 1077, 1150, 1259, 1413
HaeIII	GGCC	4 cut(s)	20, 75, 710, 722
HhaI	GCGC	1 cut(s)	1534
Hin6I	GCGC	1 cut(s)	1532
HinP1I	GCGC	1 cut(s)	1532
HindIII	AAGCTT	3 cut(s)	516, 558, 703
HinfI	GANTC	3 cut(s)	60, 688, 1210
HphI	GGTGA	2 cut(s)	419, 536
Hpy166II	GTNNAC	3 cut(s)	114, 283, 1327
Hpy188I	TCNGA	4 cut(s)	243, 952, 1273, 1561
Hpy188III	TCNNGA	3 cut(s)	416, 647, 1031
Hpy8I	GTNNAC	3 cut(s)	114, 283, 1327
Hpy99I	CGWCG	1 cut(s)	368
HpyAV	CCTTC	7 cut(s)	31, 293, 422, 572, 847, 1037, 1697
HpyCH4III	ACNGT	1 cut(s)	1732
HpyCH4IV	ACGT	2 cut(s)	328, 1202
HpyF10VI	GCNNNNNNNGC	3 cut(s)	259, 1674, 1683
HpyF3I	CTNAG	7 cut(s)	102, 146, 198, 240, 443, 870, 1498
HpySE526I	ACGT	2 cut(s)	328, 1202
HspAI	GCGC	1 cut(s)	1532
Ksp22I	TGATCA	1 cut(s)	649
Kzo9I	GATC	4 cut(s)	142, 312, 649, 937
LmnI	GCTCC	2 cut(s)	250, 856
Lsp1109I	GCAGC	6 cut(s)	116, 307, 1063, 1136, 1270, 1424
LweI	GCATC	3 cut(s)	14, 307, 1259
MaeI	CTAG	4 cut(s)	287, 569, 860, 1322
MaeII	ACGT	2 cut(s)	328, 1202
MaeIII	GTNAC	3 cut(s)	407, 455, 736
MalI	GATC	4 cut(s)	144, 314, 651, 939
MboI	GATC	4 cut(s)	142, 312, 649, 937
MflI	RGATCY	2 cut(s)	142, 937
MhlI	GDGCHC	1 cut(s)	969
MlsI	TGGCCA	2 cut(s)	75, 722
MluCI	AATT	7 cut(s)	45, 369, 666, 766, 828, 1416, 1586
MluNI	TGGCCA	2 cut(s)	75, 722
MlyI	GAGTC	1 cut(s)	1219
MmeI	TCCRAC	3 cut(s)	228, 256, 1415
MnlI	CCTC	8 cut(s)	95, 412, 702, 721, 946, 951, 1495, 1522
Mox20I	TGGCCA	2 cut(s)	75, 722
Mph1103I	ATGCAT	1 cut(s)	1225
MroXI	GAANNNNTTC	2 cut(s)	831, 1038
MscI	TGGCCA	2 cut(s)	75, 722
MseI	TTAA	7 cut(s)	27, 480, 626, 1059, 1379, 1548, 1635
MslI	CAYNNNNRTG	1 cut(s)	904
Msp20I	TGGCCA	2 cut(s)	75, 722
MspA1I	CMGCKG	1 cut(s)	1149
MspR9I	CCNGG	1 cut(s)	1463
MvaI	CCWGG	1 cut(s)	1463
MvnI	CGCG	1 cut(s)	1534
MwoI	GCNNNNNNNGC	3 cut(s)	259, 1674, 1683
NcoI	CCATGG	1 cut(s)	921
NdeII	GATC	4 cut(s)	142, 312, 649, 937
NlaIV	GGNNCC	4 cut(s)	751, 1024, 1178, 1653
NmuCI	GTSAC	1 cut(s)	407
NsiI	ATGCAT	1 cut(s)	1225
NspI	RCATGY	2 cut(s)	266, 930
PaeI	GCATGC	1 cut(s)	930
PagI	TCATGA	2 cut(s)	415, 1030
PdmI	GAANNNNTTC	2 cut(s)	831, 1038
PfeI	GAWTC	2 cut(s)	60, 688
PflFI	GACNNNGTC	2 cut(s)	1204, 1732
PflMI	CCANNNNNTGG	2 cut(s)	759, 849
PkrI	GCNGC	6 cut(s)	131, 322, 1078, 1151, 1260, 1414
PleI	GAGTC	1 cut(s)	1218
PpsI	GAGTC	1 cut(s)	1218
PshBI	ATTAAT	1 cut(s)	1548
Psp124BI	GAGCTC	1 cut(s)	969
Psp6I	CCWGG	1 cut(s)	1461
PspEI	GGTNACC	1 cut(s)	407
PspGI	CCWGG	1 cut(s)	1461
PspN4I	GGNNCC	4 cut(s)	751, 1024, 1178, 1653
PspPI	GGNCC	4 cut(s)	18, 805, 918, 1651
PsrI	GAACNNNNNNTAC	2 cut(s)	1302, 1334
PstNI	CAGNNNCTG	2 cut(s)	814, 1055
PsuI	RGATCY	2 cut(s)	142, 937
PsyI	GACNNNGTC	2 cut(s)	1204, 1732
PvuII	CAGCTG	1 cut(s)	1149
RsaI	GTAC	6 cut(s)	90, 169, 574, 818, 911, 1280
RsaNI	GTAC	6 cut(s)	89, 168, 573, 817, 910, 1279
RseI	CAYNNNNRTG	1 cut(s)	904
SacI	GAGCTC	1 cut(s)	969
SaqAI	TTAA	7 cut(s)	27, 480, 626, 1059, 1379, 1548, 1635
SatI	GCNGC	6 cut(s)	130, 321, 1077, 1150, 1259, 1413
Sau3AI	GATC	4 cut(s)	142, 312, 649, 937
Sau96I	GGNCC	4 cut(s)	18, 805, 918, 1651
ScaI	AGTACT	2 cut(s)	169, 1280
SchI	GAGTC	1 cut(s)	1219
ScrFI	CCNGG	1 cut(s)	1463
SduI	GDGCHC	1 cut(s)	969
SfaNI	GCATC	3 cut(s)	14, 307, 1259
SfcI	CTRYAG	1 cut(s)	1080
SinI	GGWCC	3 cut(s)	805, 918, 1651
SmiMI	CAYNNNNRTG	1 cut(s)	904
SmlI	CTYRAG	1 cut(s)	744
SmoI	CTYRAG	1 cut(s)	744
SphI	GCATGC	1 cut(s)	930
Sse9I	AATT	7 cut(s)	45, 369, 666, 766, 828, 1416, 1586
SsiI	CCGC	1 cut(s)	109
SspMI	CTAG	4 cut(s)	287, 569, 860, 1322
SstI	GAGCTC	1 cut(s)	969
StyD4I	CCNGG	1 cut(s)	1461
StyI	CCWWGG	1 cut(s)	921
TaaI	ACNGT	1 cut(s)	1732
TaiI	ACGT	2 cut(s)	331, 1205
TaqI	TCGA	6 cut(s)	315, 339, 363, 436, 1208, 1423
TasI	AATT	7 cut(s)	45, 369, 666, 766, 828, 1416, 1586
TatI	WGTACW	2 cut(s)	167, 1278
TfiI	GAWTC	2 cut(s)	60, 688
Tru1I	TTAA	7 cut(s)	27, 480, 626, 1059, 1379, 1548, 1635
Tru9I	TTAA	7 cut(s)	27, 480, 626, 1059, 1379, 1548, 1635
TseFI	GTSAC	1 cut(s)	407
TseI	GCWGC	6 cut(s)	129, 320, 1076, 1149, 1258, 1412
Tsp45I	GTSAC	1 cut(s)	407
TspGWI	ACGGA	1 cut(s)	1189
Tth111I	GACNNNGTC	2 cut(s)	1204, 1732
Van91I	CCANNNNNTGG	2 cut(s)	759, 849
VpaK11BI	GGWCC	3 cut(s)	805, 918, 1651
VspI	ATTAAT	1 cut(s)	1548
XagI	CCTNNNNNAGG	1 cut(s)	416
XapI	RAATTY	3 cut(s)	45, 369, 766
XceI	RCATGY	2 cut(s)	266, 930
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1366
XmiI	GTMKAC	2 cut(s)	113, 282
XmnI	GAANNNNTTC	2 cut(s)	831, 1038
XspI	CTAG	4 cut(s)	287, 569, 860, 1322
ZrmI	AGTACT	2 cut(s)	169, 1280
Zsp2I	ATGCAT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.