Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Reverse (-)

39510014 .. 39513062

Gene Structure 3049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1310500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGAATTTTCTATTTCCCAGTCCTCCTTTGCGACCTCGTCTTCTACTCCAGCTGCTCCGGAATACCTTAGTTCTCAAAAATGGAGCATCCCCGAAGATAACAGTTTGCTTTCTACTCCCTTAAAACCGCTTAACTCCAAAACGAAGTATACTTCATCTAAGGATGGCATAATTTGTTTCCAGAATGAACAAAAACTGGACGACTTAAGGCATGCATTGATAAAAGTGGGAGGAGAAGCAGTTGAAAGTTTGGACATGATCGATGCGGTTCAACGGCTAGGTCTAGACTACCACTTTGAAGAAGAAATTGACCAAATTCTCCAAAAGCAACATATAATATCTAGTACTACTGCTCATGGTGCTCACCATCCCACCGACCTACATGAAGTCGCTCTCCGCTTTCGACTACTCAGGCAGCATGGTTACTTCGTCTCTGATGATGTGTTTAACAACTTCAAGAACAGAGAAGGAAATTTCAATCAAATGTTAAGGGAAGACATCAAGGGGTTGATGAGTTTGTATGAAGCTTCACAGCTAAGTATAGAGGGTGAAGTTGTACTTGAAGAAGCTGGAAAGTTTAGTGGCCATTTCCTAAATTCATCACTGTCACATCTCGATCATCACCAGGCCAGAGTTGTTGGAAACACATTGAGAAATCCTCATCACAAAAGCTTGGCCCCATTCATGGCCAAGAACTTTTTTGTCTCTAGCTTCCAAGGAACAAATAATAGATGGCTAAATATATTACAAACTGTAGCAAAAACAGATTTAAATATGGTCCAGTCCCTTCACCAGAAAGAAGTTGCTCAAGTTTCCAAATGGTGGAAAGAGCTGGGATTGTGTAAGGAGTTGAAGTTTGCAAGAGACCAACCTATTAAATGGTACATTTGGTCCATGGCTTGCCTAACAAATCCAAACTTGTCAGATGAGAGGATTGAGCTCACAAAACCTATCTCATTTATCTATTTGATTGATGACATTTTTGACGTTTACGGGACGCTTGATGAACTCACTCTTTTCACGGAGGTTGTCAATAGATGGGAAATTGGTTCTATAGAGCACTTACCGGACTACATGAAGATATGCTTCAAGGCTCTTTACGATATGACGAATGAAATCAGCTGTAAGATCTATCAAAGGCACGGATGGAACTCGTTGCATTCGCTAAAGAAGACGTGGGCTAGTCTGTGCAATGCATTTTTAGTGGAAGCAAAATGGTTCAAATCTGGGCACTTGCCTAGGGCTGAAGAGTACTTGAAGAATGGAATTATTTCTTCTGGGGTGAATGTGGTGATGGTCCACATTTTCTTTCTGTTGGGTGAAGGTATAACCAATCAAAGTGTGGAGTTCTTGAATGGCACTCCAGCCATTATATCTTCAACGGCAGCAATTCTTCGGCTTTGGGACGACTTGGGAAGTGCCAAGGATGAGAATCAAGATGGGGACGACGGGTCATATGTAAAGTTGTATTTAAATGAACATCAAGGCAAGACCATGGAGGAAGCACAAGAACATGTTACAAATATGATTTCAGAAGAATGGAAGAAGCTGAACAAAGAATTGGTGTCTCCTAATCCACTTCCCGCGGCATTCACAAAGGCTTCCCTAAATCTCGCAAGAATGGTGCCATTGATGTACAGCTACGACGACAACCAGTGCCTTCCATCTCTTGACGAGTACATGAAATCGATGCTTCATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

568

Amino Acids

64.67

Weight (kDa)

5.69

Isoelectric Point (pI)

37.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	69 - 205	2.7e-46	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	276 - 516	4.9e-84	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	318 - 516	6.1e-53	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1624
AccB7I	CCANNNNNTGG	1 cut(s)	822
AccI	GTMKAC	1 cut(s)	149
AccII	CGCG	1 cut(s)	1586
AccIII	TCCGGA	1 cut(s)	58
AciI	CCGC	5 cut(s)	128, 266, 397, 1584, 1586
AcoI	YGGCCR	2 cut(s)	583, 687
AcsI	RAATTY	4 cut(s)	5, 315, 472, 595
AcuI	CTGAAG	1 cut(s)	1266
AfaI	GTAC	6 cut(s)	346, 558, 884, 1253, 1637, 1679
AfiI	CCNNNNNNNGG	2 cut(s)	685, 822
AflII	CTTAAG	1 cut(s)	205
AflIII	ACRYGT	1 cut(s)	1513
AhdI	GACNNNNNGTC	1 cut(s)	1450
AjiI	CACGTC	1 cut(s)	1176
AjnI	CCWGG	1 cut(s)	624
AjuI	GAANNNNNNNTTGG	2 cut(s)	1544, 1576
Alw21I	GWGCWC	3 cut(s)	364, 942, 1062
Alw26I	GTCTC	4 cut(s)	436, 709, 858, 1572
Aor13HI	TCCGGA	1 cut(s)	58
AoxI	GGCC	4 cut(s)	583, 627, 675, 687
ApeKI	GCWGC	3 cut(s)	53, 415, 1385
ApoI	RAATTY	4 cut(s)	5, 315, 472, 595
ArsI	GACNNNNNNTTYG	2 cut(s)	278, 310
Asp700I	GAANNNNTTC	1 cut(s)	1270
AspA2I	CCTAGG	1 cut(s)	1238
AspS9I	GGNCC	4 cut(s)	676, 778, 891, 1297
AsuHPI	GGTGA	7 cut(s)	356, 560, 614, 782, 1294, 1303, 1331
AvaII	GGWCC	3 cut(s)	778, 891, 1297
AvrII	CCTAGG	1 cut(s)	1238
BaeGI	GKGCMC	1 cut(s)	1233
BalI	TGGCCA	2 cut(s)	585, 689
BanI	GGYRCC	1 cut(s)	1624
BanII	GRGCYC	1 cut(s)	942
BbsI	GAAGAC	3 cut(s)	33, 501, 1178
Bbv12I	GWGCWC	3 cut(s)	364, 942, 1062
BbvI	GCAGC	3 cut(s)	40, 427, 1397
BccI	CCATC	8 cut(s)	158, 375, 726, 1032, 1140, 1288, 1433, 1672
BceAI	ACGGC	2 cut(s)	290, 1398
BciT130I	CCWGG	1 cut(s)	626
BcoDI	GTCTC	4 cut(s)	436, 709, 858, 1572
BfaI	CTAG	6 cut(s)	278, 284, 342, 708, 1182, 1239
BfmI	CTRYAG	2 cut(s)	753, 1053
BfrI	CTTAAG	1 cut(s)	205
BglII	AGATCT	1 cut(s)	1128
BisI	GCNGC	4 cut(s)	54, 416, 1386, 1587
BlnI	CCTAGG	1 cut(s)	1238
BlsI	GCNGC	4 cut(s)	55, 417, 1387, 1588
BmcAI	AGTACT	2 cut(s)	346, 1253
Bme1390I	CCNGG	1 cut(s)	626
Bme18I	GGWCC	3 cut(s)	778, 891, 1297
BmeRI	GACNNNNNGTC	1 cut(s)	1450
BmgBI	CACGTC	1 cut(s)	1176
BmgT120I	GGNCC	4 cut(s)	676, 778, 891, 1297
BmiI	GGNNCC	2 cut(s)	678, 1626
BmrFI	CCNGG	1 cut(s)	626
BmrI	ACTGGG	1 cut(s)	13
BmsI	GCATC	3 cut(s)	96, 253, 1680
BmuI	ACTGGG	1 cut(s)	13
BpiI	GAAGAC	3 cut(s)	33, 501, 1178
BplI	GAGNNNNNCTC	2 cut(s)	643, 675
BpmI	CTGGAG	2 cut(s)	33, 1347
BpuEI	CTTGAG	1 cut(s)	792
Bsa29I	ATCGAT	2 cut(s)	261, 1688
BsaBI	GATNNNNATC	1 cut(s)	1431
BsaI	GGTCTC	1 cut(s)	858
BsaJI	CCNNGG	6 cut(s)	715, 894, 1238, 1422, 1494, 1584
BsaWI	WCCGGW	2 cut(s)	58, 1066
BsaXI	ACNNNNNCTCC	4 cut(s)	225, 255, 839, 869
Bsc4I	CCNNNNNNNGG	2 cut(s)	685, 822
Bse1I	ACTGG	4 cut(s)	19, 201, 781, 1654
Bse3DI	GCAATG	1 cut(s)	1198
Bse8I	GATNNNNATC	1 cut(s)	1431
BseAI	TCCGGA	1 cut(s)	58
BseBI	CCWGG	1 cut(s)	626
BseCI	ATCGAT	2 cut(s)	261, 1688
BseDI	CCNNGG	6 cut(s)	715, 894, 1238, 1422, 1494, 1584
BseGI	GGATG	5 cut(s)	87, 169, 367, 1151, 1432
BseJI	GATNNNNATC	1 cut(s)	1431
BseLI	CCNNNNNNNGG	2 cut(s)	685, 822
BseMI	GCAATG	1 cut(s)	1198
BseMII	CTCAG	1 cut(s)	424
BseNI	ACTGG	4 cut(s)	19, 201, 781, 1654
BseRI	GAGGAG	1 cut(s)	246
BseSI	GKGCMC	1 cut(s)	1233
BseXI	GCAGC	3 cut(s)	40, 427, 1397
BseYI	CCCAGC	1 cut(s)	832
Bsh1236I	CGCG	1 cut(s)	1586
BshFI	GGCC	4 cut(s)	585, 629, 677, 689
BshNI	GGYRCC	1 cut(s)	1624
BshVI	ATCGAT	2 cut(s)	261, 1688
BsiHKAI	GWGCWC	3 cut(s)	364, 942, 1062
BsiSI	CCGG	2 cut(s)	59, 1067
BslFI	GGGAC	4 cut(s)	769, 1009, 1418, 1457
BslI	CCNNNNNNNGG	2 cut(s)	685, 822
BsmAI	GTCTC	4 cut(s)	436, 709, 858, 1572
BsmBI	CGTCTC	1 cut(s)	436
BsmFI	GGGAC	4 cut(s)	769, 1009, 1418, 1457
BsmI	GAATGC	2 cut(s)	1159, 1589
BsnI	GGCC	4 cut(s)	585, 629, 677, 689
Bso31I	GGTCTC	1 cut(s)	858
Bsp1286I	GDGCHC	4 cut(s)	364, 942, 1062, 1233
Bsp13I	TCCGGA	1 cut(s)	58
Bsp1407I	TGTACA	1 cut(s)	1635
Bsp143I	GATC	3 cut(s)	258, 616, 1128
Bsp19I	CCATGG	2 cut(s)	894, 1494
BspACI	CCGC	5 cut(s)	128, 266, 397, 1584, 1586
BspANI	GGCC	4 cut(s)	585, 629, 677, 689
BspCNI	CTCAG	1 cut(s)	423
BspDI	ATCGAT	2 cut(s)	261, 1688
BspEI	TCCGGA	1 cut(s)	58
BspFNI	CGCG	1 cut(s)	1586
BspLI	GGNNCC	2 cut(s)	678, 1626
BspT107I	GGYRCC	1 cut(s)	1624
BspTI	CTTAAG	1 cut(s)	205
BspTNI	GGTCTC	1 cut(s)	858
BsrDI	GCAATG	1 cut(s)	1198
BsrGI	TGTACA	1 cut(s)	1635
BsrI	ACTGG	4 cut(s)	19, 201, 781, 1654
BssECI	CCNNGG	6 cut(s)	715, 894, 1238, 1422, 1494, 1584
BssMI	GATC	3 cut(s)	258, 616, 1128
BssNAI	GTATAC	1 cut(s)	150
BssT1I	CCWWGG	5 cut(s)	715, 894, 1238, 1422, 1494
Bst1107I	GTATAC	1 cut(s)	150
Bst2UI	CCWGG	1 cut(s)	626
Bst4CI	ACNGT	3 cut(s)	104, 606, 754
Bst6I	CTCTTC	1 cut(s)	1242
BstAFI	CTTAAG	1 cut(s)	205
BstAUI	TGTACA	1 cut(s)	1635
BstC8I	GCNNGC	2 cut(s)	213, 901
BstDEI	CTNAG	4 cut(s)	68, 159, 410, 536
BstDSI	CCRYGG	3 cut(s)	894, 1494, 1584
BstF5I	GGATG	5 cut(s)	87, 169, 367, 1151, 1432
BstFNI	CGCG	1 cut(s)	1586
BstKTI	GATC	3 cut(s)	261, 619, 1131
BstMAI	GTCTC	4 cut(s)	436, 709, 858, 1572
BstMBI	GATC	3 cut(s)	258, 616, 1128
BstMWI	GCNNNNNNNGC	1 cut(s)	359
BstNI	CCWGG	1 cut(s)	626
BstNSI	RCATGY	2 cut(s)	215, 1517
BstSCI	CCNGG	1 cut(s)	624
BstSFI	CTRYAG	2 cut(s)	753, 1053
BstSLI	GKGCMC	1 cut(s)	1233
BstUI	CGCG	1 cut(s)	1586
BstV1I	GCAGC	3 cut(s)	40, 427, 1397
BstV2I	GAAGAC	3 cut(s)	33, 501, 1178
BstX2I	RGATCY	1 cut(s)	1128
BstYI	RGATCY	1 cut(s)	1128
BstZ17I	GTATAC	1 cut(s)	150
Bsu15I	ATCGAT	2 cut(s)	261, 1688
BsuRI	GGCC	4 cut(s)	585, 629, 677, 689
BsuTUI	ATCGAT	2 cut(s)	261, 1688
BtgI	CCRYGG	3 cut(s)	894, 1494, 1584
BtrI	CACGTC	1 cut(s)	1176
BtsCI	GGATG	5 cut(s)	87, 169, 367, 1151, 1432
BtsIMutI	CAGTG	2 cut(s)	602, 1661
Cac8I	GCNNGC	2 cut(s)	213, 901
Cfr13I	GGNCC	4 cut(s)	676, 778, 891, 1297
Cfr42I	CCGCGG	1 cut(s)	1587
ClaI	ATCGAT	2 cut(s)	261, 1688
CseI	GACGC	1 cut(s)	1006
Csp6I	GTAC	6 cut(s)	345, 557, 883, 1252, 1636, 1678
CviQI	GTAC	6 cut(s)	345, 557, 883, 1252, 1636, 1678
DdeI	CTNAG	4 cut(s)	68, 159, 410, 536
DpnI	GATC	3 cut(s)	260, 618, 1130
DpnII	GATC	3 cut(s)	258, 616, 1128
DraI	TTTAAA	2 cut(s)	771, 1473
DriI	GACNNNNNGTC	1 cut(s)	1450
EaeI	YGGCCR	2 cut(s)	583, 687
Eam1104I	CTCTTC	1 cut(s)	1242
Eam1105I	GACNNNNNGTC	1 cut(s)	1450
EarI	CTCTTC	1 cut(s)	1242
Ecl136II	GAGCTC	1 cut(s)	940
Eco130I	CCWWGG	5 cut(s)	715, 894, 1238, 1422, 1494
Eco24I	GRGCYC	1 cut(s)	942
Eco31I	GGTCTC	1 cut(s)	858
Eco47I	GGWCC	3 cut(s)	778, 891, 1297
Eco53kI	GAGCTC	1 cut(s)	940
Eco57I	CTGAAG	1 cut(s)	1266
EcoICRI	GAGCTC	1 cut(s)	940
EcoRII	CCWGG	1 cut(s)	624
EcoT14I	CCWWGG	5 cut(s)	715, 894, 1238, 1422, 1494
EcoT22I	ATGCAT	3 cut(s)	217, 1198, 1702
EcoT38I	GRGCYC	1 cut(s)	942
ErhI	CCWWGG	5 cut(s)	715, 894, 1238, 1422, 1494
Esp3I	CGTCTC	1 cut(s)	436
FalI	AAGNNNNNCTT	4 cut(s)	543, 575, 1070, 1102
FaqI	GGGAC	4 cut(s)	769, 1009, 1418, 1457
FauI	CCCGC	1 cut(s)	1591
FauNDI	CATATG	1 cut(s)	1456
FblI	GTMKAC	1 cut(s)	149
Fnu4HI	GCNGC	4 cut(s)	54, 416, 1386, 1587
FokI	GGATG	5 cut(s)	74, 176, 354, 1158, 1439
FriOI	GRGCYC	1 cut(s)	942
Fsp4HI	GCNGC	4 cut(s)	54, 416, 1386, 1587
FspBI	CTAG	6 cut(s)	278, 284, 342, 708, 1182, 1239
GluI	GCNGC	4 cut(s)	54, 416, 1386, 1587
GsaI	CCCAGC	1 cut(s)	836
GsuI	CTGGAG	2 cut(s)	33, 1347
HaeIII	GGCC	4 cut(s)	585, 629, 677, 689
HapII	CCGG	2 cut(s)	59, 1067
HgaI	GACGC	1 cut(s)	1006
HindIII	AAGCTT	2 cut(s)	525, 670
HinfI	GANTC	1 cut(s)	1432
HpaII	CCGG	2 cut(s)	59, 1067
HphI	GGTGA	7 cut(s)	356, 560, 614, 782, 1294, 1303, 1331
Hpy166II	GTNNAC	3 cut(s)	150, 991, 1300
Hpy188I	TCNGA	3 cut(s)	436, 925, 1534
Hpy188III	TCNNGA	8 cut(s)	59, 181, 284, 457, 614, 1351, 1436, 1670
Hpy8I	GTNNAC	3 cut(s)	150, 991, 1300
Hpy99I	CGWCG	2 cut(s)	1451, 1649
HpyAV	CCTTC	4 cut(s)	461, 797, 1316, 1670
HpyCH4III	ACNGT	3 cut(s)	104, 606, 754
HpyCH4IV	ACGT	2 cut(s)	987, 1175
HpyCH4V	TGCA	6 cut(s)	215, 860, 1159, 1191, 1196, 1700
HpyF10VI	GCNNNNNNNGC	1 cut(s)	359
HpyF3I	CTNAG	4 cut(s)	68, 159, 410, 536
HpySE526I	ACGT	2 cut(s)	987, 1175
Kpn2I	TCCGGA	1 cut(s)	58
KspI	CCGCGG	1 cut(s)	1587
Kzo9I	GATC	3 cut(s)	258, 616, 1128
LmnI	GCTCC	2 cut(s)	61, 84
Lsp1109I	GCAGC	3 cut(s)	40, 427, 1397
LweI	GCATC	3 cut(s)	96, 253, 1680
MaeI	CTAG	6 cut(s)	278, 284, 342, 708, 1182, 1239
MaeII	ACGT	2 cut(s)	987, 1175
MaeIII	GTNAC	3 cut(s)	422, 606, 1516
MalI	GATC	3 cut(s)	260, 618, 1130
MboI	GATC	3 cut(s)	258, 616, 1128
MflI	RGATCY	1 cut(s)	1128
MhlI	GDGCHC	4 cut(s)	364, 942, 1062, 1233
MlsI	TGGCCA	2 cut(s)	585, 689
MluNI	TGGCCA	2 cut(s)	585, 689
MmeI	TCCRAC	1 cut(s)	619
MnlI	CCTC	8 cut(s)	34, 46, 224, 538, 669, 924, 1018, 1492
Mox20I	TGGCCA	2 cut(s)	585, 689
Mph1103I	ATGCAT	3 cut(s)	217, 1198, 1702
MroI	TCCGGA	1 cut(s)	58
MroXI	GAANNNNTTC	1 cut(s)	1270
MscI	TGGCCA	2 cut(s)	585, 689
MseI	TTAA	8 cut(s)	122, 132, 206, 447, 488, 770, 876, 1472
Msp20I	TGGCCA	2 cut(s)	585, 689
MspA1I	CMGCKG	3 cut(s)	53, 1122, 1586
MspCI	CTTAAG	1 cut(s)	205
MspI	CCGG	2 cut(s)	59, 1067
MspR9I	CCNGG	1 cut(s)	626
Mva1269I	GAATGC	2 cut(s)	1159, 1589
MvaI	CCWGG	1 cut(s)	626
MvnI	CGCG	1 cut(s)	1586
MwoI	GCNNNNNNNGC	1 cut(s)	359
NcoI	CCATGG	2 cut(s)	894, 1494
NdeI	CATATG	1 cut(s)	1456
NdeII	GATC	3 cut(s)	258, 616, 1128
NlaIV	GGNNCC	2 cut(s)	678, 1626
NmuCI	GTSAC	1 cut(s)	606
NsiI	ATGCAT	3 cut(s)	217, 1198, 1702
NspI	RCATGY	2 cut(s)	215, 1517
PaeI	GCATGC	1 cut(s)	215
PciI	ACATGT	1 cut(s)	1513
PctI	GAATGC	2 cut(s)	1159, 1589
PdmI	GAANNNNTTC	1 cut(s)	1270
PfeI	GAWTC	1 cut(s)	1432
PflFI	GACNNNGTC	1 cut(s)	37
PflMI	CCANNNNNTGG	1 cut(s)	822
PkrI	GCNGC	4 cut(s)	55, 417, 1387, 1588
PscI	ACATGT	1 cut(s)	1513
Psp124BI	GAGCTC	1 cut(s)	942
Psp6I	CCWGG	1 cut(s)	624
PspFI	CCCAGC	1 cut(s)	832
PspGI	CCWGG	1 cut(s)	624
PspN4I	GGNNCC	2 cut(s)	678, 1626
PspPI	GGNCC	4 cut(s)	676, 778, 891, 1297
PsuI	RGATCY	1 cut(s)	1128
PsyI	GACNNNGTC	1 cut(s)	37
PvuII	CAGCTG	2 cut(s)	53, 1122
RsaI	GTAC	6 cut(s)	346, 558, 884, 1253, 1637, 1679
RsaNI	GTAC	6 cut(s)	345, 557, 883, 1252, 1636, 1678
SacI	GAGCTC	1 cut(s)	942
SacII	CCGCGG	1 cut(s)	1587
SaqAI	TTAA	8 cut(s)	122, 132, 206, 447, 488, 770, 876, 1472
SatI	GCNGC	4 cut(s)	54, 416, 1386, 1587
Sau3AI	GATC	3 cut(s)	258, 616, 1128
Sau96I	GGNCC	4 cut(s)	676, 778, 891, 1297
ScaI	AGTACT	2 cut(s)	346, 1253
ScrFI	CCNGG	1 cut(s)	626
SduI	GDGCHC	4 cut(s)	364, 942, 1062, 1233
SfaNI	GCATC	3 cut(s)	96, 253, 1680
SfcI	CTRYAG	2 cut(s)	753, 1053
Sfr303I	CCGCGG	1 cut(s)	1587
SgrBI	CCGCGG	1 cut(s)	1587
SinI	GGWCC	3 cut(s)	778, 891, 1297
SmiI	ATTTAAAT	2 cut(s)	771, 1473
SmlI	CTYRAG	2 cut(s)	205, 807
SmoI	CTYRAG	2 cut(s)	205, 807
SphI	GCATGC	1 cut(s)	215
SsiI	CCGC	5 cut(s)	128, 266, 397, 1584, 1586
SspMI	CTAG	6 cut(s)	278, 284, 342, 708, 1182, 1239
SstI	GAGCTC	1 cut(s)	942
StyD4I	CCNGG	1 cut(s)	624
StyI	CCWWGG	5 cut(s)	715, 894, 1238, 1422, 1494
SwaI	ATTTAAAT	2 cut(s)	771, 1473
TaaI	ACNGT	3 cut(s)	104, 606, 754
TaiI	ACGT	2 cut(s)	990, 1178
TaqI	TCGA	4 cut(s)	261, 403, 615, 1688
TatI	WGTACW	5 cut(s)	344, 556, 1251, 1635, 1677
TauI	GCSGC	1 cut(s)	1589
TfiI	GAWTC	1 cut(s)	1432
Tru1I	TTAA	8 cut(s)	122, 132, 206, 447, 488, 770, 876, 1472
Tru9I	TTAA	8 cut(s)	122, 132, 206, 447, 488, 770, 876, 1472
TscAI	CASTG	2 cut(s)	609, 1661
TseFI	GTSAC	1 cut(s)	606
TseI	GCWGC	3 cut(s)	53, 415, 1385
Tsp45I	GTSAC	1 cut(s)	606
TspGWI	ACGGA	2 cut(s)	1037, 1158
TspRI	CASTG	2 cut(s)	609, 1661
Tth111I	GACNNNGTC	1 cut(s)	37
Van91I	CCANNNNNTGG	1 cut(s)	822
Vha464I	CTTAAG	1 cut(s)	205
VpaK11BI	GGWCC	3 cut(s)	778, 891, 1297
XapI	RAATTY	4 cut(s)	5, 315, 472, 595
XbaI	TCTAGA	1 cut(s)	283
XceI	RCATGY	2 cut(s)	215, 1517
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1339
XmaJI	CCTAGG	1 cut(s)	1238
XmiI	GTMKAC	1 cut(s)	149
XmnI	GAANNNNTTC	1 cut(s)	1270
XspI	CTAG	6 cut(s)	278, 284, 342, 708, 1182, 1239
ZrmI	AGTACT	2 cut(s)	346, 1253
Zsp2I	ATGCAT	3 cut(s)	217, 1198, 1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.