Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Forward (+)

4003870 .. 4005797

Gene Structure 1928 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G003990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGCAGGATGACATGTTTGTCCAACATTCTCAGAAGTTGGAGTTGTTCAGGCATGTACTGAGAAATGTAGCAGAGCTAGATGCCCTTGAAGGTTTGAATGTGATCGATGCTGTTCAACGGCTAGGCATTGATTATCACTTTCAACAAGAAATCGATGAAATACTTCACAAGCAGATGAATATGGTGTCTGCCCATGATGATCTTCATGAGGTTGCACTTCGCTTTCGACTACTGAGACAACATGGTTACTTCGTGCCTGATGATGTGTTTAACAACTTCAAGGAAAGCAATGGGATGTTCAAGCAAGCTTTGGGTGAAGACATCAAGGGATTGATGAGCTTATATGAAGCTTCACATCTAGCTACAGAAGGAGAAGATACACTTGTTGAAGCTGGAAAATATAGTGCTCATCTGCTAAAGACCTCTTTGCCACATCTTGATCATCATCAGGCGAGAATTGTGGGCAATACATTGGGGAATCCTCATCACAAAAGTTTGGCCTCATTCATGGCCAGGAAGTTTTTTGTTACTTCTCAAGGAACCAATACATGGTTAAATTTGCTAAAAGAAGTAGCAAAAACAGATTTCAGTATGGTCCAGTCTTTGTACCAGAATGAAATTGCTCAAATCTCCAAATGGTGGAAGGAGCTAGGATTGGCTAAGGAACTGAAGTTTGCAAGAGACCAACCACTGAAATGGTACATTTGGTCCATGGCATGCCTAGCAGATCCAAAGTTATCAGAGGAGAGGGTTGAGCTCACAAAACCCATCTCATTTATCTATTTGATAGATGACATTTTTGATGTTTATGGAACCCTTAATGAACTCATTCTCTTCACAGAAGCTGTTAATAGATGGGATATTGCTGCTATAGACCATTTACCAGACTACATGAAGATATGCTTCAAGGCTCTCCATGATATGACTAATGAAATCAGCTGCAAGGTCTATAAAAAGCATGGATGGAACGCCTTGCAATCTTTGAAAAAGACGTGGGCAAGACTTTGCAATGCATTTTTGGTGGAAGCAAAATGGTTCGCATCTGGGCAGCTGCCAAAGTCAGAAGAGTACTTGAAGAATGGCATTGTTTCTTCTGGCGTAAATGTGGTTCTAGTCCACATTTTTTTTCTCTTGGGTCAAAACATGACCAAACAGAGTGTGGAGTTGTTGAATGACACTCCAACTATTATATCGTCCACAGCAGCAATTCTTCGACTTTGGGACGACTTGGGAAATGCAAACGATGAGAACCAGGATGGGAACGATGGGTCGTATGCGCGAGAAAAGACTGTTAATATGATTTCAGACGAATGGAAAAAGCTGAACAGAGAATTGCTCTCTCCAAATCCATTTCCAGCAACATTCAATTCCGCTTCCCTTAATCTCGCAAGAATGGTCCCCCTGATGTATAGCTATGATGGGAACCAATGCCTTCCATCACTTGAAGAGTATATGAAATCAATGTTGTATGAGACTGTATCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

495

Amino Acids

56.78

Weight (kDa)

5.65

Isoelectric Point (pI)

31.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	4 - 146	4.8e-45	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	215 - 421	9e-74	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	257 - 422	1.9e-43	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	17
AccB7I	CCANNNNNTGG	2 cut(s)	549, 639
AccII	CGCG	1 cut(s)	1279
AciI	CCGC	1 cut(s)	1371
AclWI	GGATC	1 cut(s)	722
AcoI	YGGCCR	1 cut(s)	510
AcsI	RAATTY	1 cut(s)	556
AcuI	CTGAAG	1 cut(s)	689
AfaI	GTAC	4 cut(s)	57, 608, 701, 1070
AfiI	CCNNNNNNNGG	2 cut(s)	549, 639
AflIII	ACRYGT	1 cut(s)	12
AjiI	CACGTC	1 cut(s)	993
AjnI	CCWGG	2 cut(s)	512, 1251
Alw21I	GWGCWC	2 cut(s)	409, 759
Alw26I	GTCTC	3 cut(s)	229, 675, 1466
AlwI	GGATC	1 cut(s)	722
AlwNI	CAGNNNCTG	1 cut(s)	845
AoxI	GGCC	2 cut(s)	498, 510
ApeKI	GCWGC	5 cut(s)	866, 939, 1048, 1051, 1202
ApoI	RAATTY	1 cut(s)	556
Asp700I	GAANNNNTTC	2 cut(s)	162, 828
AspLEI	GCGC	1 cut(s)	1279
AspS9I	GGNCC	3 cut(s)	595, 708, 1396
AsuHPI	GGTGA	1 cut(s)	326
AvaII	GGWCC	3 cut(s)	595, 708, 1396
BaeI	ACNNNNGTAYC	2 cut(s)	369, 402
BalI	TGGCCA	1 cut(s)	512
BanII	GRGCYC	1 cut(s)	759
BbsI	GAAGAC	1 cut(s)	324
Bbv12I	GWGCWC	2 cut(s)	409, 759
BbvI	GCAGC	5 cut(s)	853, 926, 1038, 1060, 1214
BccI	CCATC	7 cut(s)	776, 849, 957, 1250, 1259, 1412, 1444
BceAI	ACGGC	1 cut(s)	134
BciT130I	CCWGG	2 cut(s)	514, 1253
BclI	TGATCA	1 cut(s)	439
BcoDI	GTCTC	3 cut(s)	229, 675, 1466
BfaI	CTAG	6 cut(s)	77, 122, 359, 650, 722, 1112
BfmI	CTRYAG	2 cut(s)	363, 870
BisI	GCNGC	5 cut(s)	867, 940, 1049, 1052, 1203
BlsI	GCNGC	5 cut(s)	868, 941, 1050, 1053, 1204
BmcAI	AGTACT	1 cut(s)	1070
Bme1390I	CCNGG	2 cut(s)	514, 1253
Bme18I	GGWCC	3 cut(s)	595, 708, 1396
BmgBI	CACGTC	1 cut(s)	993
BmgT120I	GGNCC	3 cut(s)	595, 708, 1396
BmiI	GGNNCC	4 cut(s)	541, 814, 1398, 1424
BmrFI	CCNGG	2 cut(s)	514, 1253
BmsI	GCATC	3 cut(s)	70, 97, 1049
BpiI	GAAGAC	1 cut(s)	324
BplI	GAGNNNNNCTC	2 cut(s)	1320, 1352
Bpu10I	CCTNAGC	1 cut(s)	660
BpuEI	CTTGAG	1 cut(s)	519
Bsa29I	ATCGAT	2 cut(s)	105, 153
BsaBI	GATNNNNATC	1 cut(s)	444
BsaI	GGTCTC	1 cut(s)	675
BsaJI	CCNNGG	1 cut(s)	711
Bsc4I	CCNNNNNNNGG	2 cut(s)	549, 639
Bse1I	ACTGG	1 cut(s)	598
Bse3DI	GCAATG	2 cut(s)	295, 1015
Bse8I	GATNNNNATC	1 cut(s)	444
BseBI	CCWGG	2 cut(s)	514, 1253
BseCI	ATCGAT	2 cut(s)	105, 153
BseDI	CCNNGG	1 cut(s)	711
BseGI	GGATG	4 cut(s)	13, 300, 968, 1261
BseJI	GATNNNNATC	1 cut(s)	444
BseLI	CCNNNNNNNGG	2 cut(s)	549, 639
BseMI	GCAATG	2 cut(s)	295, 1015
BseMII	CTCAG	3 cut(s)	44, 50, 224
BseNI	ACTGG	1 cut(s)	598
BseRI	GAGGAG	1 cut(s)	758
BseXI	GCAGC	5 cut(s)	853, 926, 1038, 1060, 1214
Bsh1236I	CGCG	1 cut(s)	1279
BshFI	GGCC	2 cut(s)	500, 512
BshVI	ATCGAT	2 cut(s)	105, 153
BsiHKAI	GWGCWC	2 cut(s)	409, 759
BslFI	GGGAC	2 cut(s)	1235, 1382
BslI	CCNNNNNNNGG	2 cut(s)	549, 639
BsmAI	GTCTC	3 cut(s)	229, 675, 1466
BsmFI	GGGAC	2 cut(s)	1235, 1382
BsnI	GGCC	2 cut(s)	500, 512
Bso31I	GGTCTC	1 cut(s)	675
Bsp1286I	GDGCHC	2 cut(s)	409, 759
Bsp143I	GATC	4 cut(s)	102, 199, 439, 727
Bsp19I	CCATGG	1 cut(s)	711
BspACI	CCGC	1 cut(s)	1371
BspANI	GGCC	2 cut(s)	500, 512
BspCNI	CTCAG	3 cut(s)	43, 51, 225
BspDI	ATCGAT	2 cut(s)	105, 153
BspFNI	CGCG	1 cut(s)	1279
BspHI	TCATGA	1 cut(s)	205
BspLI	GGNNCC	4 cut(s)	541, 814, 1398, 1424
BspPI	GGATC	1 cut(s)	722
BspTNI	GGTCTC	1 cut(s)	675
BsrDI	GCAATG	2 cut(s)	295, 1015
BsrI	ACTGG	1 cut(s)	598
BssECI	CCNNGG	1 cut(s)	711
BssMI	GATC	4 cut(s)	102, 199, 439, 727
BssT1I	CCWWGG	1 cut(s)	711
Bst2UI	CCWGG	2 cut(s)	514, 1253
Bst4CI	ACNGT	2 cut(s)	1291, 1477
Bst6I	CTCTTC	3 cut(s)	839, 1059, 1440
BstC8I	GCNNGC	2 cut(s)	306, 718
BstDEI	CTNAG	4 cut(s)	30, 59, 233, 660
BstDSI	CCRYGG	1 cut(s)	711
BstF5I	GGATG	4 cut(s)	13, 300, 968, 1261
BstFNI	CGCG	1 cut(s)	1279
BstHHI	GCGC	1 cut(s)	1279
BstKTI	GATC	4 cut(s)	105, 202, 442, 730
BstMAI	GTCTC	3 cut(s)	229, 675, 1466
BstMBI	GATC	4 cut(s)	102, 199, 439, 727
BstMWI	GCNNNNNNNGC	1 cut(s)	722
BstNI	CCWGG	2 cut(s)	514, 1253
BstNSI	RCATGY	3 cut(s)	16, 56, 720
BstSCI	CCNGG	2 cut(s)	512, 1251
BstSFI	CTRYAG	2 cut(s)	363, 870
BstUI	CGCG	1 cut(s)	1279
BstV1I	GCAGC	5 cut(s)	853, 926, 1038, 1060, 1214
BstV2I	GAAGAC	1 cut(s)	324
BstX2I	RGATCY	1 cut(s)	727
BstXI	CCANNNNNNTGG	1 cut(s)	696
BstYI	RGATCY	1 cut(s)	727
Bsu15I	ATCGAT	2 cut(s)	105, 153
BsuRI	GGCC	2 cut(s)	500, 512
BsuTUI	ATCGAT	2 cut(s)	105, 153
BtgI	CCRYGG	1 cut(s)	711
BtrI	CACGTC	1 cut(s)	993
BtsCI	GGATG	4 cut(s)	13, 300, 968, 1261
BtsIMutI	CAGTG	1 cut(s)	689
Cac8I	GCNNGC	2 cut(s)	306, 718
CaiI	CAGNNNCTG	1 cut(s)	845
CciI	TCATGA	1 cut(s)	205
CfoI	GCGC	1 cut(s)	1279
Cfr13I	GGNCC	3 cut(s)	595, 708, 1396
ClaI	ATCGAT	2 cut(s)	105, 153
Csp6I	GTAC	4 cut(s)	56, 607, 700, 1069
CviQI	GTAC	4 cut(s)	56, 607, 700, 1069
DdeI	CTNAG	4 cut(s)	30, 59, 233, 660
DpnI	GATC	4 cut(s)	104, 201, 441, 729
DpnII	GATC	4 cut(s)	102, 199, 439, 727
DrdI	GACNNNNNNGTC	1 cut(s)	17
DseDI	GACNNNNNNGTC	1 cut(s)	17
EaeI	YGGCCR	1 cut(s)	510
Eam1104I	CTCTTC	3 cut(s)	839, 1059, 1440
EarI	CTCTTC	3 cut(s)	839, 1059, 1440
Ecl136II	GAGCTC	1 cut(s)	757
Eco130I	CCWWGG	1 cut(s)	711
Eco24I	GRGCYC	1 cut(s)	759
Eco31I	GGTCTC	1 cut(s)	675
Eco47I	GGWCC	3 cut(s)	595, 708, 1396
Eco53kI	GAGCTC	1 cut(s)	757
Eco57I	CTGAAG	1 cut(s)	689
EcoICRI	GAGCTC	1 cut(s)	757
EcoRII	CCWGG	2 cut(s)	512, 1251
EcoT14I	CCWWGG	1 cut(s)	711
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	1 cut(s)	759
ErhI	CCWWGG	1 cut(s)	711
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 887, 919
FaqI	GGGAC	2 cut(s)	1235, 1382
FbaI	TGATCA	1 cut(s)	439
Fnu4HI	GCNGC	5 cut(s)	867, 940, 1049, 1052, 1203
FokI	GGATG	4 cut(s)	20, 307, 975, 1268
FriOI	GRGCYC	1 cut(s)	759
Fsp4HI	GCNGC	5 cut(s)	867, 940, 1049, 1052, 1203
FspBI	CTAG	6 cut(s)	77, 122, 359, 650, 722, 1112
GlaI	GCGC	1 cut(s)	1278
GluI	GCNGC	5 cut(s)	867, 940, 1049, 1052, 1203
HaeIII	GGCC	2 cut(s)	500, 512
HhaI	GCGC	1 cut(s)	1279
Hin6I	GCGC	1 cut(s)	1277
HinP1I	GCGC	1 cut(s)	1277
HindIII	AAGCTT	2 cut(s)	306, 348
HinfI	GANTC	1 cut(s)	478
HphI	GGTGA	1 cut(s)	326
Hpy166II	GTNNAC	2 cut(s)	1117, 1197
Hpy188I	TCNGA	4 cut(s)	33, 742, 1063, 1306
Hpy188III	TCNNGA	2 cut(s)	206, 437
Hpy8I	GTNNAC	2 cut(s)	1117, 1197
HpyAV	CCTTC	4 cut(s)	83, 362, 637, 1442
HpyCH4III	ACNGT	2 cut(s)	1291, 1477
HpyCH4IV	ACGT	1 cut(s)	992
HpyCH4V	TGCA	8 cut(s)	4, 215, 677, 942, 976, 1008, 1013, 1238
HpyF10VI	GCNNNNNNNGC	1 cut(s)	722
HpyF3I	CTNAG	4 cut(s)	30, 59, 233, 660
HpySE526I	ACGT	1 cut(s)	992
HspAI	GCGC	1 cut(s)	1277
Ksp22I	TGATCA	1 cut(s)	439
Kzo9I	GATC	4 cut(s)	102, 199, 439, 727
LmnI	GCTCC	1 cut(s)	646
Lsp1109I	GCAGC	5 cut(s)	853, 926, 1038, 1060, 1214
LweI	GCATC	3 cut(s)	70, 97, 1049
MaeI	CTAG	6 cut(s)	77, 122, 359, 650, 722, 1112
MaeII	ACGT	1 cut(s)	992
MaeIII	GTNAC	2 cut(s)	245, 526
MalI	GATC	4 cut(s)	104, 201, 441, 729
MboI	GATC	4 cut(s)	102, 199, 439, 727
MflI	RGATCY	1 cut(s)	727
MhlI	GDGCHC	2 cut(s)	409, 759
MlsI	TGGCCA	1 cut(s)	512
MluCI	AATT	6 cut(s)	456, 556, 618, 1206, 1331, 1366
MluNI	TGGCCA	1 cut(s)	512
MmeI	TCCRAC	3 cut(s)	18, 46, 1205
MnlI	CCTC	6 cut(s)	202, 433, 492, 511, 736, 741
Mox20I	TGGCCA	1 cut(s)	512
Mph1103I	ATGCAT	1 cut(s)	1015
MroXI	GAANNNNTTC	2 cut(s)	162, 828
MscI	TGGCCA	1 cut(s)	512
MseI	TTAA	6 cut(s)	270, 554, 819, 849, 1293, 1380
MslI	CAYNNNNRTG	1 cut(s)	694
Msp20I	TGGCCA	1 cut(s)	512
MspA1I	CMGCKG	2 cut(s)	939, 1051
MspR9I	CCNGG	2 cut(s)	514, 1253
MvaI	CCWGG	2 cut(s)	514, 1253
MvnI	CGCG	1 cut(s)	1279
MwoI	GCNNNNNNNGC	1 cut(s)	722
NcoI	CCATGG	1 cut(s)	711
NdeII	GATC	4 cut(s)	102, 199, 439, 727
NlaIV	GGNNCC	4 cut(s)	541, 814, 1398, 1424
NsiI	ATGCAT	1 cut(s)	1015
NspI	RCATGY	3 cut(s)	16, 56, 720
PaeI	GCATGC	1 cut(s)	720
PagI	TCATGA	1 cut(s)	205
PciI	ACATGT	1 cut(s)	12
PdmI	GAANNNNTTC	2 cut(s)	162, 828
PfeI	GAWTC	1 cut(s)	478
PflMI	CCANNNNNTGG	2 cut(s)	549, 639
PkrI	GCNGC	5 cut(s)	868, 941, 1050, 1053, 1204
PscI	ACATGT	1 cut(s)	12
Psp124BI	GAGCTC	1 cut(s)	759
Psp6I	CCWGG	2 cut(s)	512, 1251
PspGI	CCWGG	2 cut(s)	512, 1251
PspN4I	GGNNCC	4 cut(s)	541, 814, 1398, 1424
PspPI	GGNCC	3 cut(s)	595, 708, 1396
PsrI	GAACNNNNNNTAC	2 cut(s)	1092, 1124
PstNI	CAGNNNCTG	1 cut(s)	845
PsuI	RGATCY	1 cut(s)	727
PvuII	CAGCTG	2 cut(s)	939, 1051
RsaI	GTAC	4 cut(s)	57, 608, 701, 1070
RsaNI	GTAC	4 cut(s)	56, 607, 700, 1069
RseI	CAYNNNNRTG	1 cut(s)	694
SacI	GAGCTC	1 cut(s)	759
SaqAI	TTAA	6 cut(s)	270, 554, 819, 849, 1293, 1380
SatI	GCNGC	5 cut(s)	867, 940, 1049, 1052, 1203
Sau3AI	GATC	4 cut(s)	102, 199, 439, 727
Sau96I	GGNCC	3 cut(s)	595, 708, 1396
ScaI	AGTACT	1 cut(s)	1070
ScrFI	CCNGG	2 cut(s)	514, 1253
SduI	GDGCHC	2 cut(s)	409, 759
SfaNI	GCATC	3 cut(s)	70, 97, 1049
SfcI	CTRYAG	2 cut(s)	363, 870
SinI	GGWCC	3 cut(s)	595, 708, 1396
SmiMI	CAYNNNNRTG	1 cut(s)	694
SmlI	CTYRAG	1 cut(s)	534
SmoI	CTYRAG	1 cut(s)	534
SphI	GCATGC	1 cut(s)	720
Sse9I	AATT	6 cut(s)	456, 556, 618, 1206, 1331, 1366
SsiI	CCGC	1 cut(s)	1371
SspMI	CTAG	6 cut(s)	77, 122, 359, 650, 722, 1112
SstI	GAGCTC	1 cut(s)	759
StyD4I	CCNGG	2 cut(s)	512, 1251
StyI	CCWWGG	1 cut(s)	711
TaaI	ACNGT	2 cut(s)	1291, 1477
TaiI	ACGT	1 cut(s)	995
TaqI	TCGA	4 cut(s)	105, 153, 226, 1213
TasI	AATT	6 cut(s)	456, 556, 618, 1206, 1331, 1366
TatI	WGTACW	2 cut(s)	55, 1068
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	6 cut(s)	270, 554, 819, 849, 1293, 1380
Tru9I	TTAA	6 cut(s)	270, 554, 819, 849, 1293, 1380
TscAI	CASTG	1 cut(s)	696
TseI	GCWGC	5 cut(s)	866, 939, 1048, 1051, 1202
TspRI	CASTG	1 cut(s)	696
Van91I	CCANNNNNTGG	2 cut(s)	549, 639
VpaK11BI	GGWCC	3 cut(s)	595, 708, 1396
XapI	RAATTY	1 cut(s)	556
XceI	RCATGY	3 cut(s)	16, 56, 720
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1156
XmnI	GAANNNNTTC	2 cut(s)	162, 828
XspI	CTAG	6 cut(s)	77, 122, 359, 650, 722, 1112
ZrmI	AGTACT	1 cut(s)	1070
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.