(3S,6E)-nerolidol synthase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 60 - 144 | 1.2e-19 | Terpene synthase, N-terminal domain |
| Terpene_synth_C | PF03936 | 210 - 280 | 1.3e-20 | Terpene synthase family, metal binding domain |
| Terpene_synth_C | PF03936 | 280 - 396 | 1.3e-19 | Terpene synthase family, metal binding domain |
| Terpene_syn_C_2 | PF19086 | 280 - 396 | 3.6e-18 | Terpene synthase family 2, C-terminal metal binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1241, 1290 |
| AccB1I | GGYRCC | 1 cut(s) | 797 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 624 |
| AccI | GTMKAC | 3 cut(s) | 300, 686, 765 |
| AccII | CGCG | 1 cut(s) | 449 |
| AciI | CCGC | 3 cut(s) | 137, 309, 550 |
| AclWI | GGATC | 1 cut(s) | 707 |
| AcoI | YGGCCR | 1 cut(s) | 692 |
| AcsI | RAATTY | 1 cut(s) | 1005 |
| AcuI | CTGAAG | 1 cut(s) | 44 |
| AcyI | GRCGYC | 1 cut(s) | 144 |
| AfaI | GTAC | 4 cut(s) | 452, 863, 954, 1048 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 624 |
| AflII | CTTAAG | 1 cut(s) | 1366 |
| AjnI | CCWGG | 1 cut(s) | 349 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 641, 673 |
| Alw26I | GTCTC | 2 cut(s) | 229, 660 |
| AlwI | GGATC | 1 cut(s) | 707 |
| AoxI | GGCC | 2 cut(s) | 160, 692 |
| ApeKI | GCWGC | 2 cut(s) | 827, 1380 |
| ApoI | RAATTY | 1 cut(s) | 1005 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 767, 799 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 813, 1005 |
| AspA2I | CCTAGG | 1 cut(s) | 157 |
| AspLEI | GCGC | 1 cut(s) | 1380 |
| AspS9I | GGNCC | 2 cut(s) | 1075, 1270 |
| AsuHPI | GGTGA | 1 cut(s) | 194 |
| AsuII | TTCGAA | 1 cut(s) | 519 |
| AsuNHI | GCTAGC | 1 cut(s) | 556 |
| AvaII | GGWCC | 2 cut(s) | 1075, 1270 |
| AvrII | CCTAGG | 1 cut(s) | 157 |
| BaeGI | GKGCMC | 1 cut(s) | 800 |
| BanI | GGYRCC | 1 cut(s) | 797 |
| BauI | CACGAG | 2 cut(s) | 169, 1149 |
| BbvI | GCAGC | 1 cut(s) | 814 |
| BccI | CCATC | 2 cut(s) | 691, 1076 |
| BciT130I | CCWGG | 1 cut(s) | 351 |
| BciVI | GTATCC | 1 cut(s) | 625 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BcoDI | GTCTC | 2 cut(s) | 229, 660 |
| BfaI | CTAG | 7 cut(s) | 158, 557, 566, 635, 707, 981, 1263 |
| BfmI | CTRYAG | 1 cut(s) | 828 |
| BfrI | CTTAAG | 1 cut(s) | 1366 |
| BfuI | GTATCC | 1 cut(s) | 625 |
| BisI | GCNGC | 2 cut(s) | 828, 1381 |
| BlnI | CCTAGG | 1 cut(s) | 157 |
| BlsI | GCNGC | 2 cut(s) | 829, 1382 |
| BmcAI | AGTACT | 1 cut(s) | 863 |
| Bme1390I | CCNGG | 1 cut(s) | 351 |
| Bme18I | GGWCC | 2 cut(s) | 1075, 1270 |
| BmgT120I | GGNCC | 2 cut(s) | 1075, 1270 |
| BmiI | GGNNCC | 2 cut(s) | 799, 1272 |
| BmrFI | CCNGG | 1 cut(s) | 351 |
| BmrI | ACTGGG | 1 cut(s) | 935 |
| BmsI | GCATC | 7 cut(s) | 88, 253, 341, 472, 1135, 1223, 1241 |
| BmtI | GCTAGC | 1 cut(s) | 560 |
| BmuI | ACTGGG | 1 cut(s) | 935 |
| Bpu14I | TTCGAA | 1 cut(s) | 519 |
| Bsa29I | ATCGAT | 1 cut(s) | 752 |
| BsaAI | YACGTR | 2 cut(s) | 690, 956 |
| BsaBI | GATNNNNATC | 1 cut(s) | 429 |
| BsaHI | GRCGYC | 1 cut(s) | 144 |
| BsaI | GGTCTC | 1 cut(s) | 660 |
| BsaJI | CCNNGG | 3 cut(s) | 36, 157, 349 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 641, 671 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 624 |
| Bse1I | ACTGG | 1 cut(s) | 930 |
| Bse8I | GATNNNNATC | 1 cut(s) | 429 |
| BseBI | CCWGG | 1 cut(s) | 351 |
| BseCI | ATCGAT | 1 cut(s) | 752 |
| BseDI | CCNNGG | 3 cut(s) | 36, 157, 349 |
| BseGI | GGATG | 6 cut(s) | 103, 414, 440, 463, 1027, 1232 |
| BseJI | GATNNNNATC | 1 cut(s) | 429 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 624 |
| BseMII | CTCAG | 1 cut(s) | 224 |
| BseNI | ACTGG | 1 cut(s) | 930 |
| BseSI | GKGCMC | 1 cut(s) | 800 |
| BseXI | GCAGC | 1 cut(s) | 814 |
| Bsh1236I | CGCG | 1 cut(s) | 449 |
| BshFI | GGCC | 2 cut(s) | 162, 694 |
| BshNI | GGYRCC | 1 cut(s) | 797 |
| BshVI | ATCGAT | 1 cut(s) | 752 |
| BslFI | GGGAC | 2 cut(s) | 54, 1256 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 624 |
| BsmAI | GTCTC | 2 cut(s) | 229, 660 |
| BsmFI | GGGAC | 2 cut(s) | 54, 1256 |
| BsmI | GAATGC | 2 cut(s) | 914, 1154 |
| BsnI | GGCC | 2 cut(s) | 162, 694 |
| Bso31I | GGTCTC | 1 cut(s) | 660 |
| Bsp119I | TTCGAA | 1 cut(s) | 519 |
| Bsp1286I | GDGCHC | 1 cut(s) | 800 |
| Bsp143I | GATC | 3 cut(s) | 427, 712, 753 |
| BspACI | CCGC | 3 cut(s) | 137, 309, 550 |
| BspANI | GGCC | 2 cut(s) | 162, 694 |
| BspCNI | CTCAG | 1 cut(s) | 225 |
| BspDI | ATCGAT | 1 cut(s) | 752 |
| BspFNI | CGCG | 1 cut(s) | 449 |
| BspLI | GGNNCC | 2 cut(s) | 799, 1272 |
| BspMAI | CTGCAG | 1 cut(s) | 832 |
| BspOI | GCTAGC | 1 cut(s) | 560 |
| BspPI | GGATC | 1 cut(s) | 707 |
| BspT104I | TTCGAA | 1 cut(s) | 519 |
| BspT107I | GGYRCC | 1 cut(s) | 797 |
| BspTI | CTTAAG | 1 cut(s) | 1366 |
| BspTNI | GGTCTC | 1 cut(s) | 660 |
| BsrI | ACTGG | 1 cut(s) | 930 |
| BssECI | CCNNGG | 3 cut(s) | 36, 157, 349 |
| BssMI | GATC | 3 cut(s) | 427, 712, 753 |
| BssNAI | GTATAC | 1 cut(s) | 687 |
| BssNI | GRCGYC | 1 cut(s) | 144 |
| BssSI | CACGAG | 2 cut(s) | 169, 1149 |
| BssT1I | CCWWGG | 2 cut(s) | 36, 157 |
| Bst1107I | GTATAC | 1 cut(s) | 687 |
| Bst2BI | CACGAG | 2 cut(s) | 169, 1149 |
| Bst2UI | CCWGG | 1 cut(s) | 351 |
| Bst4CI | ACNGT | 1 cut(s) | 952 |
| Bst6I | CTCTTC | 3 cut(s) | 351, 824, 852 |
| BstACI | GRCGYC | 1 cut(s) | 144 |
| BstAFI | CTTAAG | 1 cut(s) | 1366 |
| BstBAI | YACGTR | 2 cut(s) | 690, 956 |
| BstBI | TTCGAA | 1 cut(s) | 519 |
| BstC8I | GCNNGC | 2 cut(s) | 558, 703 |
| BstDEI | CTNAG | 3 cut(s) | 233, 498, 645 |
| BstF5I | GGATG | 6 cut(s) | 103, 414, 440, 463, 1027, 1232 |
| BstFNI | CGCG | 1 cut(s) | 449 |
| BstHHI | GCGC | 1 cut(s) | 1380 |
| BstKTI | GATC | 3 cut(s) | 430, 715, 756 |
| BstMAI | GTCTC | 2 cut(s) | 229, 660 |
| BstMBI | GATC | 3 cut(s) | 427, 712, 753 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 26, 143, 707, 1311 |
| BstNI | CCWGG | 1 cut(s) | 351 |
| BstNSI | RCATGY | 3 cut(s) | 705, 899, 914 |
| BstSCI | CCNGG | 1 cut(s) | 349 |
| BstSFI | CTRYAG | 1 cut(s) | 828 |
| BstSLI | GKGCMC | 1 cut(s) | 800 |
| BstSNI | TACGTA | 1 cut(s) | 956 |
| BstUI | CGCG | 1 cut(s) | 449 |
| BstV1I | GCAGC | 1 cut(s) | 814 |
| BstX2I | RGATCY | 1 cut(s) | 712 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 681 |
| BstYI | RGATCY | 1 cut(s) | 712 |
| BstZ17I | GTATAC | 1 cut(s) | 687 |
| Bsu15I | ATCGAT | 1 cut(s) | 752 |
| BsuI | GTATCC | 1 cut(s) | 625 |
| BsuRI | GGCC | 2 cut(s) | 162, 694 |
| BsuTUI | ATCGAT | 1 cut(s) | 752 |
| BtsCI | GGATG | 6 cut(s) | 103, 414, 440, 463, 1027, 1232 |
| BtsI | GCAGTG | 2 cut(s) | 199, 1334 |
| BtsIMutI | CAGTG | 2 cut(s) | 199, 1334 |
| Cac8I | GCNNGC | 2 cut(s) | 558, 703 |
| CfoI | GCGC | 1 cut(s) | 1380 |
| Cfr13I | GGNCC | 2 cut(s) | 1075, 1270 |
| ClaI | ATCGAT | 1 cut(s) | 752 |
| CseI | GACGC | 1 cut(s) | 152 |
| Csp6I | GTAC | 4 cut(s) | 451, 862, 953, 1047 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1299, 1334 |
| CviAII | CATG | 8 cut(s) | 148, 251, 493, 577, 702, 896, 911, 1114 |
| CviQI | GTAC | 4 cut(s) | 451, 862, 953, 1047 |
| DdeI | CTNAG | 3 cut(s) | 233, 498, 645 |
| DpnI | GATC | 3 cut(s) | 429, 714, 755 |
| DpnII | GATC | 3 cut(s) | 427, 712, 753 |
| EaeI | YGGCCR | 1 cut(s) | 692 |
| Eam1104I | CTCTTC | 3 cut(s) | 351, 824, 852 |
| EarI | CTCTTC | 3 cut(s) | 351, 824, 852 |
| Eco105I | TACGTA | 1 cut(s) | 956 |
| Eco130I | CCWWGG | 2 cut(s) | 36, 157 |
| Eco31I | GGTCTC | 1 cut(s) | 660 |
| Eco47I | GGWCC | 2 cut(s) | 1075, 1270 |
| Eco57I | CTGAAG | 1 cut(s) | 44 |
| EcoRII | CCWGG | 1 cut(s) | 349 |
| EcoT14I | CCWWGG | 2 cut(s) | 36, 157 |
| EcoT22I | ATGCAT | 1 cut(s) | 916 |
| ErhI | CCWWGG | 2 cut(s) | 36, 157 |
| FaeI | CATG | 8 cut(s) | 151, 254, 496, 580, 705, 899, 914, 1117 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 348, 380, 491, 523 |
| FaqI | GGGAC | 2 cut(s) | 54, 1256 |
| FatI | CATG | 8 cut(s) | 147, 250, 492, 576, 701, 895, 910, 1113 |
| FauI | CCCGC | 1 cut(s) | 543 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| FblI | GTMKAC | 3 cut(s) | 300, 686, 765 |
| Fnu4HI | GCNGC | 2 cut(s) | 828, 1381 |
| FokI | GGATG | 6 cut(s) | 110, 421, 427, 450, 1034, 1219 |
| Fsp4HI | GCNGC | 2 cut(s) | 828, 1381 |
| FspBI | CTAG | 7 cut(s) | 158, 557, 566, 635, 707, 981, 1263 |
| GlaI | GCGC | 1 cut(s) | 1379 |
| GluI | GCNGC | 2 cut(s) | 828, 1381 |
| HaeIII | GGCC | 2 cut(s) | 162, 694 |
| HgaI | GACGC | 1 cut(s) | 152 |
| HhaI | GCGC | 1 cut(s) | 1380 |
| Hin1I | GRCGYC | 1 cut(s) | 144 |
| Hin1II | CATG | 8 cut(s) | 151, 254, 496, 580, 705, 899, 914, 1117 |
| Hin6I | GCGC | 1 cut(s) | 1378 |
| HinP1I | GCGC | 1 cut(s) | 1378 |
| HincII | GTYRAC | 2 cut(s) | 142, 301 |
| HindII | GTYRAC | 2 cut(s) | 142, 301 |
| HindIII | AAGCTT | 2 cut(s) | 435, 718 |
| HinfI | GANTC | 4 cut(s) | 359, 489, 584, 1025 |
| HphI | GGTGA | 1 cut(s) | 194 |
| Hpy166II | GTNNAC | 4 cut(s) | 142, 301, 687, 766 |
| Hpy188I | TCNGA | 6 cut(s) | 116, 596, 727, 1138, 1177, 1345 |
| Hpy188III | TCNNGA | 4 cut(s) | 283, 661, 962, 1029 |
| Hpy8I | GTNNAC | 4 cut(s) | 142, 301, 687, 766 |
| HpyCH4III | ACNGT | 1 cut(s) | 952 |
| HpyCH4IV | ACGT | 2 cut(s) | 689, 955 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 26, 143, 707, 1311 |
| HpyF3I | CTNAG | 3 cut(s) | 233, 498, 645 |
| HpySE526I | ACGT | 2 cut(s) | 689, 955 |
| Hsp92I | GRCGYC | 1 cut(s) | 144 |
| Hsp92II | CATG | 8 cut(s) | 151, 254, 496, 580, 705, 899, 914, 1117 |
| HspAI | GCGC | 1 cut(s) | 1378 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 3 cut(s) | 427, 712, 753 |
| LmnI | GCTCC | 1 cut(s) | 553 |
| Lsp1109I | GCAGC | 1 cut(s) | 814 |
| LweI | GCATC | 7 cut(s) | 88, 253, 341, 472, 1135, 1223, 1241 |
| MaeI | CTAG | 7 cut(s) | 158, 557, 566, 635, 707, 981, 1263 |
| MaeII | ACGT | 2 cut(s) | 689, 955 |
| MaeIII | GTNAC | 5 cut(s) | 253, 360, 1109, 1332, 1370 |
| MalI | GATC | 3 cut(s) | 429, 714, 755 |
| MboI | GATC | 3 cut(s) | 427, 712, 753 |
| MboII | GAAGA | 9 cut(s) | 131, 368, 811, 869, 910, 984, 1001, 1154, 1190 |
| MfeI | CAATTG | 1 cut(s) | 128 |
| MflI | RGATCY | 1 cut(s) | 712 |
| MhlI | GDGCHC | 1 cut(s) | 800 |
| MluCI | AATT | 8 cut(s) | 80, 89, 128, 514, 675, 771, 1005, 1291 |
| MlyI | GAGTC | 2 cut(s) | 368, 1019 |
| MnlI | CCTC | 8 cut(s) | 43, 431, 721, 812, 831, 1066, 1132, 1202 |
| Mph1103I | ATGCAT | 1 cut(s) | 916 |
| MroXI | GAANNNNTTC | 2 cut(s) | 813, 1005 |
| MseI | TTAA | 5 cut(s) | 273, 509, 678, 1254, 1367 |
| MspA1I | CMGCKG | 1 cut(s) | 827 |
| MspCI | CTTAAG | 1 cut(s) | 1366 |
| MspR9I | CCNGG | 1 cut(s) | 351 |
| MunI | CAATTG | 1 cut(s) | 128 |
| Mva1269I | GAATGC | 2 cut(s) | 914, 1154 |
| MvaI | CCWGG | 1 cut(s) | 351 |
| MvnI | CGCG | 1 cut(s) | 449 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 26, 143, 707, 1311 |
| NdeII | GATC | 3 cut(s) | 427, 712, 753 |
| NheI | GCTAGC | 1 cut(s) | 556 |
| NlaIII | CATG | 8 cut(s) | 151, 254, 496, 580, 705, 899, 914, 1117 |
| NlaIV | GGNNCC | 2 cut(s) | 799, 1272 |
| NmuCI | GTSAC | 2 cut(s) | 360, 1332 |
| NsiI | ATGCAT | 1 cut(s) | 916 |
| NspI | RCATGY | 3 cut(s) | 705, 899, 914 |
| NspV | TTCGAA | 1 cut(s) | 519 |
| PaeI | GCATGC | 1 cut(s) | 705 |
| PctI | GAATGC | 2 cut(s) | 914, 1154 |
| PdmI | GAANNNNTTC | 2 cut(s) | 813, 1005 |
| PfeI | GAWTC | 2 cut(s) | 489, 584 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 624 |
| PkrI | GCNGC | 2 cut(s) | 829, 1382 |
| PleI | GAGTC | 2 cut(s) | 367, 1019 |
| PpsI | GAGTC | 2 cut(s) | 367, 1019 |
| Ppu21I | YACGTR | 2 cut(s) | 690, 956 |
| PsiI | TTATAA | 2 cut(s) | 1241, 1290 |
| Psp6I | CCWGG | 1 cut(s) | 349 |
| PspGI | CCWGG | 1 cut(s) | 349 |
| PspN4I | GGNNCC | 2 cut(s) | 799, 1272 |
| PspPI | GGNCC | 2 cut(s) | 1075, 1270 |
| PstI | CTGCAG | 1 cut(s) | 832 |
| PsuI | RGATCY | 1 cut(s) | 712 |
| PvuII | CAGCTG | 1 cut(s) | 827 |
| RsaI | GTAC | 4 cut(s) | 452, 863, 954, 1048 |
| RsaNI | GTAC | 4 cut(s) | 451, 862, 953, 1047 |
| SalI | GTCGAC | 1 cut(s) | 299 |
| SaqAI | TTAA | 5 cut(s) | 273, 509, 678, 1254, 1367 |
| SatI | GCNGC | 2 cut(s) | 828, 1381 |
| Sau3AI | GATC | 3 cut(s) | 427, 712, 753 |
| Sau96I | GGNCC | 2 cut(s) | 1075, 1270 |
| ScaI | AGTACT | 1 cut(s) | 863 |
| SchI | GAGTC | 2 cut(s) | 368, 1019 |
| ScrFI | CCNGG | 1 cut(s) | 351 |
| SduI | GDGCHC | 1 cut(s) | 800 |
| SfaNI | GCATC | 7 cut(s) | 88, 253, 341, 472, 1135, 1223, 1241 |
| SfcI | CTRYAG | 1 cut(s) | 828 |
| SfuI | TTCGAA | 1 cut(s) | 519 |
| SinI | GGWCC | 2 cut(s) | 1075, 1270 |
| SmlI | CTYRAG | 1 cut(s) | 1366 |
| SmoI | CTYRAG | 1 cut(s) | 1366 |
| SnaBI | TACGTA | 1 cut(s) | 956 |
| SphI | GCATGC | 1 cut(s) | 705 |
| Sse9I | AATT | 8 cut(s) | 80, 89, 128, 514, 675, 771, 1005, 1291 |
| SsiI | CCGC | 3 cut(s) | 137, 309, 550 |
| SspI | AATATT | 1 cut(s) | 270 |
| SspMI | CTAG | 7 cut(s) | 158, 557, 566, 635, 707, 981, 1263 |
| StyD4I | CCNGG | 1 cut(s) | 349 |
| StyI | CCWWGG | 2 cut(s) | 36, 157 |
| TaaI | ACNGT | 1 cut(s) | 952 |
| TaiI | ACGT | 2 cut(s) | 692, 958 |
| TaqI | TCGA | 6 cut(s) | 226, 300, 423, 519, 752, 804 |
| TasI | AATT | 8 cut(s) | 80, 89, 128, 514, 675, 771, 1005, 1291 |
| TatI | WGTACW | 1 cut(s) | 861 |
| TfiI | GAWTC | 2 cut(s) | 489, 584 |
| Tru1I | TTAA | 5 cut(s) | 273, 509, 678, 1254, 1367 |
| Tru9I | TTAA | 5 cut(s) | 273, 509, 678, 1254, 1367 |
| TscAI | CASTG | 2 cut(s) | 199, 1341 |
| TseFI | GTSAC | 2 cut(s) | 360, 1332 |
| TseI | GCWGC | 2 cut(s) | 827, 1380 |
| Tsp45I | GTSAC | 2 cut(s) | 360, 1332 |
| TspGWI | ACGGA | 1 cut(s) | 416 |
| TspRI | CASTG | 2 cut(s) | 199, 1341 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 624 |
| Vha464I | CTTAAG | 1 cut(s) | 1366 |
| VpaK11BI | GGWCC | 2 cut(s) | 1075, 1270 |
| XapI | RAATTY | 1 cut(s) | 1005 |
| XceI | RCATGY | 3 cut(s) | 705, 899, 914 |
| XmaJI | CCTAGG | 1 cut(s) | 157 |
| XmiI | GTMKAC | 3 cut(s) | 300, 686, 765 |
| XmnI | GAANNNNTTC | 2 cut(s) | 813, 1005 |
| XspI | CTAG | 7 cut(s) | 158, 557, 566, 635, 707, 981, 1263 |
| ZrmI | AGTACT | 1 cut(s) | 863 |
| Zsp2I | ATGCAT | 1 cut(s) | 916 |