Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Reverse (-)

31966522 .. 31978088

Gene Structure 11567 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG265100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGCGTCCATTCTTCAAGCTCACTCTGCTTCCTCAAAGTCTGAGATCGGTGATCTTCACGTCCGTCGTGAAGAAAAACTGAGGGAGTTGAAGGAAACACTCACAAATGCCGGGGAAGATCAACTGCAGCAATTGGTTTTGGTTGATGCCATGCAACGCCTCGGCGTCGCTTATCTCTTCCAAAATGAAATTTATGCAATCTTAGAGAAGCAATACACCAGGTCATCAGCTTATAATGGTGATGATGATGGCAATCATCAACTTCTTGAGGCTTCCCTTCGTTTTCGACTATTGAGACAACAAGGTTTCCCTGTAACTCCAGACGCAGAGGCGTGTAACAAGATCAAGAACAATGAGAAGCTCAAATCCGGACTAATAGCTAGTGATGAAGACATAAATGGATTAGTGGAATTATGTGAAGCATCTCACTTGAGTTTCCAAGGAGAAGAAATGCTTGACGAAGCAGGAAAGCTCAGCCGCCAGCTTCTCACTGCCTGGGTCTCTAACAATCACAATGATCATCGCGTAACACTTGTCGAGCGCACTTTGGAGCATCCCTATCACAAGAGCCTGACAAGATTCATGGCCAAGAAGTTTTTGAATAATTTTCAAGGCCAAGAAAAATGGGTTTGTTCTTTACAAGAGCTAGCAAACCTAGAGTTCAACATGGTTGAATCCATAATCCAAAATGAAATCCTACTAGTATCTGGAAGGTGGAAAGAACTAGGTTTGACCAAAGAGTTGAAGTTTGTGAGAGACCAGCCAATTAAATGGTACACATGGCCGATGGCATGCCTCGTTGATCCACTATTATCAGAGGAAAGGATTGAACTCACAAAAGCAGTCTCTCTTGTTTACATTATAGATGATATTTTTGATGTTCGTGGAACACTAGATGAACTCGTTCTCTTTACAGCAGCAGTTGCGAGATGGGATACTGCTTCAAATGATGAGCTACCGAATTACATGAAAACATGTTTCAAAGCTCTTAATGACATTACCAATAATATCAGCCAGTGTGTCCACGAAAAGCACGGATGGAACCCTATTGAAATCCTAAGAGAATCGTGGATAAGATTGTGTAAGGCATTCTTAGTAGAAACACAATGGTTTAGGCGTGGGGAGTTGCCAAACTCCGGAGATTACTTGAAGAATGGGATTATCAGTTCAGGGGTGCCTTCATTTTTAACCCACGCCTTCTGTATTATTGGTCAAGGTATGATCAAGGAAACCATAGATCTTTTCAACAACATCAACTTACCTAGTATCGTGTCTTCAACGGCCACGATACTTCGGCTATGGGATGACTTTGGAACTGCCAAGGATGAGGACCAAAATGGGTTTGATGGATCATACATAGAGTGCTACATGAAAGAACACAGAGGCTCTTCTGTTGAAGAGGTGCAAGCACATGTAATCCAAAAGATTTCAGATGAGTGGAAGCGCCTCAACCAAGAATGCTTCTCTGCTTGCAATCCATTTTCAGAGTCCTTTACACAATTCGCTCTCAATATTTCTAGAATGGTTCCCATGATGTACGATTACAATGCCCATCATTGTCTTCCAAGCCTTGAGGAGAATATGAAGTCGTTGCTTTCGGATAGTTTTCTTGCCGAAGGCATCTACTGGAAACCCATGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

547

Amino Acids

62.73

Weight (kDa)

5.16

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	15 - 178	1.6e-30	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	240 - 481	4.8e-73	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	280 - 482	3.2e-45	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	234
AccB1I	GGYRCC	1 cut(s)	1174
AccII	CGCG	1 cut(s)	525
AccIII	TCCGGA	2 cut(s)	368, 1136
AciI	CCGC	1 cut(s)	478
AclWI	GGATC	2 cut(s)	797, 1357
AcoI	YGGCCR	3 cut(s)	585, 782, 1281
AcsI	RAATTY	1 cut(s)	189
AcyI	GRCGYC	2 cut(s)	5, 165
AfaI	GTAC	2 cut(s)	776, 1538
AfiI	CCNNNNNNNGG	1 cut(s)	1136
AflIII	ACRYGT	2 cut(s)	974, 1411
AhlI	ACTAGT	1 cut(s)	700
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	2 cut(s)	218, 494
AloI	GAACNNNNNNTCC	2 cut(s)	1150, 1182
AluBI	AGCT	9 cut(s)	20, 230, 361, 380, 472, 484, 646, 955, 986
AluI	AGCT	9 cut(s)	20, 230, 361, 380, 472, 484, 646, 955, 986
Alw26I	GTCTC	4 cut(s)	289, 505, 750, 850
AlwI	GGATC	2 cut(s)	797, 1357
Aor13HI	TCCGGA	2 cut(s)	368, 1136
AoxI	GGCC	4 cut(s)	585, 613, 782, 1281
ApeKI	GCWGC	2 cut(s)	127, 917
ApoI	RAATTY	1 cut(s)	189
Asp700I	GAANNNNTTC	1 cut(s)	903
AspLEI	GCGC	2 cut(s)	543, 1446
AspS9I	GGNCC	1 cut(s)	1330
AsuC2I	CCSGG	1 cut(s)	112
AsuHPI	GGTGA	2 cut(s)	62, 251
AsuNHI	GCTAGC	1 cut(s)	646
AvaII	GGWCC	1 cut(s)	1330
BalI	TGGCCA	1 cut(s)	587
BanI	GGYRCC	1 cut(s)	1174
BarI	GAAGNNNNNNTAC	2 cut(s)	1258, 1290
BbsI	GAAGAC	3 cut(s)	396, 1266, 1553
BbvI	GCAGC	2 cut(s)	139, 929
BccI	CCATC	6 cut(s)	242, 781, 924, 1032, 1340, 1560
BceAI	ACGGC	1 cut(s)	1296
BcgI	CGANNNNNNTGC	2 cut(s)	1529, 1563
BciT130I	CCWGG	2 cut(s)	220, 496
BciVI	GTATCC	1 cut(s)	928
BclI	TGATCA	2 cut(s)	517, 1221
BcnI	CCSGG	1 cut(s)	112
BcoDI	GTCTC	4 cut(s)	289, 505, 750, 850
BcuI	ACTAGT	1 cut(s)	700
BfaI	CTAG	8 cut(s)	381, 647, 656, 701, 725, 893, 1263, 1518
BfmI	CTRYAG	1 cut(s)	125
BfoI	RGCGCY	1 cut(s)	1447
BfuI	GTATCC	1 cut(s)	928
BglII	AGATCT	1 cut(s)	1237
BisI	GCNGC	3 cut(s)	128, 478, 918
BlpI	GCTNAGC	1 cut(s)	473
BlsI	GCNGC	3 cut(s)	129, 479, 919
Bme1390I	CCNGG	3 cut(s)	112, 220, 496
Bme18I	GGWCC	1 cut(s)	1330
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	1 cut(s)	1330
BmiI	GGNNCC	3 cut(s)	1043, 1176, 1527
BmrFI	CCNGG	3 cut(s)	112, 220, 496
BmsI	GCATC	4 cut(s)	136, 431, 562, 1629
BmtI	GCTAGC	1 cut(s)	650
BpiI	GAAGAC	3 cut(s)	396, 1266, 1553
BpmI	CTGGAG	1 cut(s)	303
Bpu1102I	GCTNAGC	1 cut(s)	473
BpuEI	CTTGAG	3 cut(s)	287, 451, 1592
BpuMI	CCSGG	1 cut(s)	112
BsaBI	GATNNNNATC	1 cut(s)	252
BsaHI	GRCGYC	2 cut(s)	5, 165
BsaI	GGTCTC	2 cut(s)	505, 750
BsaJI	CCNNGG	5 cut(s)	111, 160, 439, 495, 1320
BsaWI	WCCGGW	2 cut(s)	368, 1136
Bsc4I	CCNNNNNNNGG	1 cut(s)	1136
Bse1I	ACTGG	2 cut(s)	1015, 1631
Bse8I	GATNNNNATC	1 cut(s)	252
BseAI	TCCGGA	2 cut(s)	368, 1136
BseBI	CCWGG	2 cut(s)	220, 496
BseDI	CCNNGG	5 cut(s)	111, 160, 439, 495, 1320
BseGI	GGATG	4 cut(s)	553, 1043, 1309, 1330
BseJI	GATNNNNATC	1 cut(s)	252
BseLI	CCNNNNNNNGG	1 cut(s)	1136
BseMII	CTCAG	3 cut(s)	33, 71, 487
BseNI	ACTGG	2 cut(s)	1015, 1631
BseRI	GAGGAG	1 cut(s)	1589
BseXI	GCAGC	2 cut(s)	139, 929
Bsh1236I	CGCG	1 cut(s)	525
BshFI	GGCC	4 cut(s)	587, 615, 784, 1283
BshNI	GGYRCC	1 cut(s)	1174
BsiSI	CCGG	3 cut(s)	111, 369, 1137
BslI	CCNNNNNNNGG	1 cut(s)	1136
BsmAI	GTCTC	4 cut(s)	289, 505, 750, 850
BsmI	GAATGC	2 cut(s)	1088, 1463
BsnI	GGCC	4 cut(s)	587, 615, 784, 1283
Bso31I	GGTCTC	2 cut(s)	505, 750
Bsp13I	TCCGGA	2 cut(s)	368, 1136
Bsp143I	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
Bsp1720I	GCTNAGC	1 cut(s)	473
BspACI	CCGC	1 cut(s)	478
BspANI	GGCC	4 cut(s)	587, 615, 784, 1283
BspCNI	CTCAG	3 cut(s)	34, 72, 486
BspEI	TCCGGA	2 cut(s)	368, 1136
BspFNI	CGCG	1 cut(s)	525
BspLI	GGNNCC	3 cut(s)	1043, 1176, 1527
BspMAI	CTGCAG	1 cut(s)	129
BspOI	GCTAGC	1 cut(s)	650
BspPI	GGATC	2 cut(s)	797, 1357
BspQI	GCTCTTC	1 cut(s)	1393
BspT107I	GGYRCC	1 cut(s)	1174
BspTNI	GGTCTC	2 cut(s)	505, 750
BsrI	ACTGG	2 cut(s)	1015, 1631
BssECI	CCNNGG	5 cut(s)	111, 160, 439, 495, 1320
BssMI	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
BssNI	GRCGYC	2 cut(s)	5, 165
BssT1I	CCWWGG	2 cut(s)	439, 1320
Bst2UI	CCWGG	2 cut(s)	220, 496
Bst6I	CTCTTC	3 cut(s)	182, 1392, 1393
BstACI	GRCGYC	2 cut(s)	5, 165
BstAPI	GCANNNNNTGC	1 cut(s)	923
BstC8I	GCNNGC	5 cut(s)	482, 648, 793, 1407, 1471
BstDEI	CTNAG	6 cut(s)	42, 80, 202, 473, 1058, 1093
BstF5I	GGATG	4 cut(s)	553, 1043, 1309, 1330
BstFNI	CGCG	1 cut(s)	525
BstH2I	RGCGCY	1 cut(s)	1447
BstHHI	GCGC	2 cut(s)	543, 1446
BstKTI	GATC	9 cut(s)	48, 55, 121, 345, 520, 805, 1224, 1240, 1352
BstMAI	GTCTC	4 cut(s)	289, 505, 750, 850
BstMBI	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
BstMWI	GCNNNNNNNGC	2 cut(s)	26, 923
BstNI	CCWGG	2 cut(s)	220, 496
BstNSI	RCATGY	3 cut(s)	795, 978, 1415
BstSCI	CCNGG	3 cut(s)	110, 218, 494
BstSFI	CTRYAG	1 cut(s)	125
BstUI	CGCG	1 cut(s)	525
BstV1I	GCAGC	2 cut(s)	139, 929
BstV2I	GAAGAC	3 cut(s)	396, 1266, 1553
BstX2I	RGATCY	1 cut(s)	1237
BstXI	CCANNNNNNTGG	1 cut(s)	771
BstYI	RGATCY	1 cut(s)	1237
BsuI	GTATCC	1 cut(s)	928
BsuRI	GGCC	4 cut(s)	587, 615, 784, 1283
BtgZI	GCGATG	1 cut(s)	506
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	4 cut(s)	553, 1043, 1309, 1330
BtsI	GCAGTG	1 cut(s)	489
BtsIMutI	CAGTG	2 cut(s)	489, 1022
Cac8I	GCNNGC	5 cut(s)	482, 648, 793, 1407, 1471
CfoI	GCGC	2 cut(s)	543, 1446
Cfr13I	GGNCC	1 cut(s)	1330
CseI	GACGC	2 cut(s)	154, 332
CsiI	ACCWGGT	1 cut(s)	218
Csp6I	GTAC	2 cut(s)	775, 1537
CviQI	GTAC	2 cut(s)	775, 1537
DdeI	CTNAG	6 cut(s)	42, 80, 202, 473, 1058, 1093
DpnI	GATC	9 cut(s)	47, 54, 120, 344, 519, 804, 1223, 1239, 1351
DpnII	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
EaeI	YGGCCR	3 cut(s)	585, 782, 1281
Eam1104I	CTCTTC	3 cut(s)	182, 1392, 1393
EarI	CTCTTC	3 cut(s)	182, 1392, 1393
Eco130I	CCWWGG	2 cut(s)	439, 1320
Eco31I	GGTCTC	2 cut(s)	505, 750
Eco47I	GGWCC	1 cut(s)	1330
EcoRII	CCWGG	2 cut(s)	218, 494
EcoT14I	CCWWGG	2 cut(s)	439, 1320
ErhI	CCWWGG	2 cut(s)	439, 1320
FalI	AAGNNNNNCTT	4 cut(s)	438, 470, 1076, 1108
FbaI	TGATCA	2 cut(s)	517, 1221
Fnu4HI	GCNGC	3 cut(s)	128, 478, 918
FokI	GGATG	4 cut(s)	540, 1050, 1316, 1337
Fsp4HI	GCNGC	3 cut(s)	128, 478, 918
FspBI	CTAG	8 cut(s)	381, 647, 656, 701, 725, 893, 1263, 1518
GlaI	GCGC	2 cut(s)	542, 1445
GluI	GCNGC	3 cut(s)	128, 478, 918
GsuI	CTGGAG	1 cut(s)	303
HaeII	RGCGCY	1 cut(s)	1447
HaeIII	GGCC	4 cut(s)	587, 615, 784, 1283
HapII	CCGG	3 cut(s)	111, 369, 1137
HgaI	GACGC	2 cut(s)	154, 332
HhaI	GCGC	2 cut(s)	543, 1446
Hin1I	GRCGYC	2 cut(s)	5, 165
Hin6I	GCGC	2 cut(s)	541, 1444
HinP1I	GCGC	2 cut(s)	541, 1444
HinfI	GANTC	4 cut(s)	579, 674, 1064, 1487
HpaII	CCGG	3 cut(s)	111, 369, 1137
HphI	GGTGA	2 cut(s)	62, 251
Hpy166II	GTNNAC	3 cut(s)	777, 856, 1024
Hpy188I	TCNGA	5 cut(s)	43, 817, 1432, 1486, 1600
Hpy188III	TCNNGA	8 cut(s)	68, 266, 320, 346, 369, 708, 1137, 1518
Hpy8I	GTNNAC	3 cut(s)	777, 856, 1024
Hpy99I	CGWCG	2 cut(s)	69, 170
HpyAV	CCTTC	6 cut(s)	85, 287, 705, 1188, 1207, 1610
HpyCH4IV	ACGT	1 cut(s)	60
HpyCH4V	TGCA	6 cut(s)	127, 154, 197, 1405, 1473, 1639
HpyF10VI	GCNNNNNNNGC	2 cut(s)	26, 923
HpyF3I	CTNAG	6 cut(s)	42, 80, 202, 473, 1058, 1093
HpySE526I	ACGT	1 cut(s)	60
Hsp92I	GRCGYC	2 cut(s)	5, 165
HspAI	GCGC	2 cut(s)	541, 1444
Kpn2I	TCCGGA	2 cut(s)	368, 1136
Ksp22I	TGATCA	2 cut(s)	517, 1221
Kzo9I	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
LguI	GCTCTTC	1 cut(s)	1393
LmnI	GCTCC	1 cut(s)	550
Lsp1109I	GCAGC	2 cut(s)	139, 929
LweI	GCATC	4 cut(s)	136, 431, 562, 1629
MabI	ACCWGGT	1 cut(s)	218
MaeI	CTAG	8 cut(s)	381, 647, 656, 701, 725, 893, 1263, 1518
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	3 cut(s)	313, 335, 526
MalI	GATC	9 cut(s)	47, 54, 120, 344, 519, 804, 1223, 1239, 1351
MboI	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
MfeI	CAATTG	1 cut(s)	131
MflI	RGATCY	1 cut(s)	1237
MlsI	TGGCCA	1 cut(s)	587
MluCI	AATT	7 cut(s)	131, 189, 410, 604, 765, 961, 1499
MluNI	TGGCCA	1 cut(s)	587
MlyI	GAGTC	1 cut(s)	1496
Mox20I	TGGCCA	1 cut(s)	587
MroI	TCCGGA	2 cut(s)	368, 1136
MroXI	GAANNNNTTC	1 cut(s)	903
MscI	TGGCCA	1 cut(s)	587
MseI	TTAA	3 cut(s)	768, 990, 1187
Msp20I	TGGCCA	1 cut(s)	587
MspI	CCGG	3 cut(s)	111, 369, 1137
MspR9I	CCNGG	3 cut(s)	112, 220, 496
MunI	CAATTG	1 cut(s)	131
Mva1269I	GAATGC	2 cut(s)	1088, 1463
MvaI	CCWGG	2 cut(s)	220, 496
MvnI	CGCG	1 cut(s)	525
MwoI	GCNNNNNNNGC	2 cut(s)	26, 923
NciI	CCSGG	1 cut(s)	112
NdeII	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
NheI	GCTAGC	1 cut(s)	646
NlaIV	GGNNCC	3 cut(s)	1043, 1176, 1527
NmeAIII	GCCGAG	1 cut(s)	141
NspI	RCATGY	3 cut(s)	795, 978, 1415
PaeI	GCATGC	1 cut(s)	795
PciI	ACATGT	2 cut(s)	974, 1411
PciSI	GCTCTTC	1 cut(s)	1393
PctI	GAATGC	2 cut(s)	1088, 1463
PdmI	GAANNNNTTC	1 cut(s)	903
PfeI	GAWTC	3 cut(s)	579, 674, 1064
PkrI	GCNGC	3 cut(s)	129, 479, 919
PleI	GAGTC	1 cut(s)	1495
PpsI	GAGTC	1 cut(s)	1495
PscI	ACATGT	2 cut(s)	974, 1411
PsiI	TTATAA	1 cut(s)	234
Psp6I	CCWGG	2 cut(s)	218, 494
PspGI	CCWGG	2 cut(s)	218, 494
PspN4I	GGNNCC	3 cut(s)	1043, 1176, 1527
PspPI	GGNCC	1 cut(s)	1330
PstI	CTGCAG	1 cut(s)	129
PsuI	RGATCY	1 cut(s)	1237
RsaI	GTAC	2 cut(s)	776, 1538
RsaNI	GTAC	2 cut(s)	775, 1537
SapI	GCTCTTC	1 cut(s)	1393
SaqAI	TTAA	3 cut(s)	768, 990, 1187
SatI	GCNGC	3 cut(s)	128, 478, 918
Sau3AI	GATC	9 cut(s)	45, 52, 118, 342, 517, 802, 1221, 1237, 1349
Sau96I	GGNCC	1 cut(s)	1330
SchI	GAGTC	1 cut(s)	1496
ScrFI	CCNGG	3 cut(s)	112, 220, 496
SexAI	ACCWGGT	1 cut(s)	218
SfaNI	GCATC	4 cut(s)	136, 431, 562, 1629
SfcI	CTRYAG	1 cut(s)	125
SinI	GGWCC	1 cut(s)	1330
SmlI	CTYRAG	3 cut(s)	266, 430, 1571
SmoI	CTYRAG	3 cut(s)	266, 430, 1571
SpeI	ACTAGT	1 cut(s)	700
SphI	GCATGC	1 cut(s)	795
Sse9I	AATT	7 cut(s)	131, 189, 410, 604, 765, 961, 1499
SsiI	CCGC	1 cut(s)	478
SspI	AATATT	1 cut(s)	1513
SspMI	CTAG	8 cut(s)	381, 647, 656, 701, 725, 893, 1263, 1518
StyD4I	CCNGG	3 cut(s)	110, 218, 494
StyI	CCWWGG	2 cut(s)	439, 1320
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	2 cut(s)	286, 537
TasI	AATT	7 cut(s)	131, 189, 410, 604, 765, 961, 1499
TauI	GCSGC	1 cut(s)	480
TfiI	GAWTC	3 cut(s)	579, 674, 1064
Tru1I	TTAA	3 cut(s)	768, 990, 1187
Tru9I	TTAA	3 cut(s)	768, 990, 1187
TscAI	CASTG	2 cut(s)	496, 1022
TseI	GCWGC	2 cut(s)	127, 917
TspDTI	ATGAA	9 cut(s)	201, 402, 571, 705, 912, 983, 1170, 1385, 1598
TspGWI	ACGGA	2 cut(s)	53, 1050
TspRI	CASTG	2 cut(s)	496, 1022
VpaK11BI	GGWCC	1 cut(s)	1330
XapI	RAATTY	1 cut(s)	189
XbaI	TCTAGA	1 cut(s)	1517
XceI	RCATGY	3 cut(s)	795, 978, 1415
XmnI	GAANNNNTTC	1 cut(s)	903
XspI	CTAG	8 cut(s)	381, 647, 656, 701, 725, 893, 1263, 1518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.