Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000720

Physical Location & Seq

Genomic Coordinates Forward (+)

57558737 .. 57561943

Gene Structure 3207 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0413900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1194 bp

ATGGAAGCAGAAGCTCTGAATCACGTAAAGTACGGCATCCCTTTCTACGGCATCGGTTGGGTTCCCGACGGCATCCCTCTCACCTCCTCGGAGCAGGAGGAGAACAACGATCAGAAAACCGAGACTCGGACCGAGTCGGTTCCCGATTCCAACCATATAGTATTGGCCGGCGGTGGCGGCCAGGGCAACAGCGGCGTCAAAAACGCCGTCGTCCTCATCCAGTTCGATCCCGCCTCGACTTGTATCTCCCGTGAGCCGGTGGCTAAGCTCGGGTTAGGCTCTGATTTGCCTTACAGAATGGCGGTTCATCCCGGTGCTGACGGTCTGATTTGTGCGTTTCCTGAAAGCTGCAGTTGGTTTGAATGGGAGAAAGAATTGAGGGAGGGAGCTCATAAGCCAAGTGTGAAGCAATCTGATAGACTACTTAAACAATTGCAAGATGTAGGGCAACAGTTAGCCCTGGCATTTAACAAAGAAGGTTCGGTGCTTGCTACCGGAGGCGAGGATGGCAATTTAAGGGTTTTCAACTGGCCCAGCATGGAAATTATGTTCACTCAAGCTCAAGCTCATAGAACAGTCAAGCAGTTAGATTTCAGCCATGACGGGAAATTTCTTGTCTCCTTGGGACAAAGTGGCCCTGGTAGAGTCTGGGATGTGACTTCAGCTGCAGTTGTAGCTACTTTACCAACGGAAAAGGATGAGGTATTTTGTGCATGCAAATTTTCTCTAGTGAACAATGGGATTGAAGTTCTACATCTTGCAGATAAAGATGGAATCATTGTAACATGGAACACAACCACATGGAGGAGGGTTCGATCCAAGCGAATTACTCGAGATGGCATCACCGCCTTTGATGTTTCGGCTGATGGAAAGCTCCTTGCATGCGGGACAACTGCTGGAGATCTTTTGATACTAAAGTCAGCCGGATTGCGGGTTCAAAAAGTCATCCCAAAAGCACACAGTGGGTTTGTAACTGCGTTGAGTTTCTCGCATGATTCAAGAGTTTTGGCTTCCACATCAATGGACTCAAGTGCAAGGGTGTCCACACTTGAGGAAGTGAAGAAAAGTGGAGTGAGCTTATGGGTCGTTATACTCATTATCCTAGTATCCATTCTCGCATATTTCCTAAACGATCCTGAGAGCTGGACAATGTTGAAGTCTGAATTGGAGAAAGTTTACAGCTCGTGGCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009987 GO:0010333 GO:0010334 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0031347 GO:0034007 GO:0042214 GO:0042742 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043692 GO:0043693 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046246 GO:0046872 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0051761 GO:0051762 GO:0065007 GO:0071704 GO:0080013 GO:0080134 GO:0098542 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00902 ko00909 ko01100 ko01110 ko01130 map00902 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

397

Amino Acids

43.29

Weight (kDa)

5.9

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	146 - 233	2e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	151 - 302	2.3e-16	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	152 - 271	2.3e-12	WDR5 beta-propeller domain
WD40_Prp19	PF24814	152 - 347	3.5e-16	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	153 - 227	1.6e-06	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	153 - 337	1e-13	WDHD1 first WD40 domain
WDR55	PF24796	153 - 340	3e-09	WDR55
Beta-prop_EML	PF23409	188 - 345	3e-07	Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz	PF24807	197 - 353	5.5e-09	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	209 - 354	6e-11	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	212 - 345	2.5e-06	WDR36/Utp21 first beta-propeller
Beta-prop_WDR5	PF25175	254 - 347	5.4e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000720)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61680 AT1G61680
fragaria_vesca	FvH4_3g03042 FvH4_3g03042 FvH4_3g03045 FvH4_3g03061 FvH4_3g03072 FvH4_3g03072 FvH4_3g03081 FvH4_3g03150 FvH4_3g03150
malus_domestica	MD05G1334800.v1.1 MD05G1335000.v1.1 MD05G1335100.v1.1 MD10G1309700.v1.1 MD10G1309800.v1.1 MD10G1309900.v1.1 MD10G1310200.v1.1 MD10G1310300.v1.1 MD10G1310500.v1.1 MD10G1310600.v1.1
prunus_persica	Prupe.4G030300_v2.0.a1 Prupe.4G030400_v2.0.a1
pyrus_communis	pycom05g30640 pycom10g26110 pycom10g26140 pycom10g26150 pycom10g26160
rosa_chinensis	RchiOBHm_Chr5g0004711 RchiOBHm_Chr5g0004731 RchiOBHm_Chr5g0004761 RchiOBHm_Chr5g0004801
rosa_laevigata	RLG00000030230 RLG00000031254 RLG00000031255 RLG00000031257 RLG00000031260
rosa_multiflora	Rmu_co8094102.1_g000001 Rmu_sc0002210.1_g000005 Rmu_sc0002210.1_g000008 Rmu_sc0002210.1_g000009 Rmu_sc0008308.1_g000013 Rmu_sc0010871.1_g000028 Rmu_sc0030338.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070820 Rroxscaffold_1G00070840 Rroxscaffold_1G00070850
rosa_rugosa	Rorug04G0413500 Rorug04G0413500 Rorug04G0413700 Rorug04G0413800 Rorug04G0413900 Rorug05G0165300
rosa_samantha	Rh5AG041200 Rh5AG041300 Rh5BG040900 Rh5BG041000 Rh5BG041100 Rh5BG041300 Rh5CG044700 Rh5CG044800 Rh5CG045200 Rh5DG040900 Rh5DG041000 Rh5DG041200 Rh5DG041700 Rh5DG265100
rosa_wichuraiana	Rw5G003960 Rw5G003980 Rw5G003990 Rw5G004000 Rw5G004010 Rw5G004040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	8 cut(s)	171, 177, 192, 231, 302, 846, 885, 931
AclWI	GGATC	3 cut(s)	221, 810, 1127
AcoI	YGGCCR	2 cut(s)	165, 178
AcsI	RAATTY	2 cut(s)	608, 719
AcuI	CTGAAG	1 cut(s)	645
AcyI	GRCGYC	1 cut(s)	195
AdeI	CACNNNGTG	1 cut(s)	962
AfaI	GTAC	1 cut(s)	32
AfiI	CCNNNNNNNGG	5 cut(s)	47, 126, 256, 804, 930
AgsI	TTSAA	6 cut(s)	362, 526, 746, 938, 999, 1156
AjnI	CCWGG	3 cut(s)	180, 459, 637
AjuI	GAANNNNNNNTTGG	2 cut(s)	1148, 1180
AloI	GAACNNNNNNTCC	4 cut(s)	533, 565, 918, 950
Alw21I	GWGCWC	1 cut(s)	391
Alw26I	GTCTC	2 cut(s)	116, 622
AlwI	GGATC	3 cut(s)	221, 810, 1127
Ama87I	CYCGRG	2 cut(s)	269, 831
AoxI	GGCC	4 cut(s)	165, 178, 530, 634
ApeKI	GCWGC	2 cut(s)	348, 665
ApoI	RAATTY	2 cut(s)	608, 719
ArsI	GACNNNNNNTTYG	2 cut(s)	192, 224
AspS9I	GGNCC	3 cut(s)	129, 531, 635
AsuC2I	CCSGG	1 cut(s)	312
AsuHPI	GGTGA	2 cut(s)	73, 835
AvaI	CYCGRG	2 cut(s)	269, 831
AvaII	GGWCC	1 cut(s)	129
BaeI	ACNNNNGTAYC	2 cut(s)	902, 935
BanII	GRGCYC	1 cut(s)	391
BauI	CACGAG	1 cut(s)	1183
Bbv12I	GWGCWC	1 cut(s)	391
BbvI	GCAGC	2 cut(s)	335, 652
BccI	CCATC	4 cut(s)	500, 764, 830, 860
BceAI	ACGGC	4 cut(s)	49, 64, 85, 191
BciT130I	CCWGG	3 cut(s)	182, 461, 639
BciVI	GTATCC	1 cut(s)	1117
BcnI	CCSGG	1 cut(s)	312
BcoDI	GTCTC	2 cut(s)	116, 622
BfaI	CTAG	2 cut(s)	728, 1103
BfmI	CTRYAG	2 cut(s)	349, 666
BfuI	GTATCC	1 cut(s)	1117
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	4 cut(s)	178, 193, 349, 666
BlpI	GCTNAGC	1 cut(s)	264
BlsI	GCNGC	4 cut(s)	179, 194, 350, 667
Bme1390I	CCNGG	4 cut(s)	182, 312, 461, 639
Bme18I	GGWCC	1 cut(s)	129
BmeT110I	CYCGRG	2 cut(s)	269, 831
BmgT120I	GGNCC	3 cut(s)	129, 531, 635
BmiI	GGNNCC	2 cut(s)	63, 141
BmrFI	CCNGG	4 cut(s)	182, 312, 461, 639
BmsI	GCATC	4 cut(s)	45, 60, 81, 849
BpmI	CTGGAG	1 cut(s)	918
Bpu1102I	GCTNAGC	1 cut(s)	264
BpuEI	CTTGAG	4 cut(s)	540, 546, 1012, 1070
BpuMI	CCSGG	1 cut(s)	312
BsaAI	YACGTR	1 cut(s)	25
BsaHI	GRCGYC	1 cut(s)	195
BsaJI	CCNNGG	5 cut(s)	87, 181, 459, 621, 637
BsaWI	WCCGGW	1 cut(s)	494
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 126, 256, 804, 930
Bse118I	RCCGGY	2 cut(s)	167, 256
Bse1I	ACTGG	2 cut(s)	220, 533
BseBI	CCWGG	3 cut(s)	182, 461, 639
BseDI	CCNNGG	5 cut(s)	87, 181, 459, 621, 637
BseGI	GGATG	8 cut(s)	36, 72, 216, 307, 511, 658, 703, 945
BseLI	CCNNNNNNNGG	5 cut(s)	47, 126, 256, 804, 930
BseMII	CTCAG	1 cut(s)	1128
BseNI	ACTGG	2 cut(s)	220, 533
BseRI	GAGGAG	3 cut(s)	76, 113, 820
BseXI	GCAGC	2 cut(s)	335, 652
BseYI	CCCAGC	1 cut(s)	533
BshFI	GGCC	4 cut(s)	167, 180, 532, 636
BsiHKAI	GWGCWC	1 cut(s)	391
BsiHKCI	CYCGRG	2 cut(s)	269, 831
BsiSI	CCGG	5 cut(s)	168, 257, 312, 495, 924
BslFI	GGGAC	2 cut(s)	639, 901
BslI	CCNNNNNNNGG	5 cut(s)	47, 126, 256, 804, 930
BsmAI	GTCTC	2 cut(s)	116, 622
BsmFI	GGGAC	2 cut(s)	639, 901
BsnI	GGCC	4 cut(s)	167, 180, 532, 636
BsoBI	CYCGRG	2 cut(s)	269, 831
Bsp1286I	GDGCHC	1 cut(s)	391
Bsp143I	GATC	5 cut(s)	109, 226, 815, 901, 1132
Bsp1720I	GCTNAGC	1 cut(s)	264
BspACI	CCGC	8 cut(s)	171, 177, 192, 231, 302, 846, 885, 931
BspANI	GGCC	4 cut(s)	167, 180, 532, 636
BspCNI	CTCAG	1 cut(s)	1129
BspLI	GGNNCC	2 cut(s)	63, 141
BspMAI	CTGCAG	2 cut(s)	353, 670
BspPI	GGATC	3 cut(s)	221, 810, 1127
BsrFI	RCCGGY	2 cut(s)	167, 256
BsrI	ACTGG	2 cut(s)	220, 533
BssAI	RCCGGY	2 cut(s)	167, 256
BssECI	CCNNGG	5 cut(s)	87, 181, 459, 621, 637
BssMI	GATC	5 cut(s)	109, 226, 815, 901, 1132
BssNI	GRCGYC	1 cut(s)	195
BssSI	CACGAG	1 cut(s)	1183
BssT1I	CCWWGG	1 cut(s)	621
Bst2BI	CACGAG	1 cut(s)	1183
Bst2UI	CCWGG	3 cut(s)	182, 461, 639
Bst4CI	ACNGT	4 cut(s)	323, 453, 577, 962
BstACI	GRCGYC	1 cut(s)	195
BstBAI	YACGTR	1 cut(s)	25
BstC8I	GCNNGC	4 cut(s)	169, 489, 715, 883
BstDEI	CTNAG	2 cut(s)	264, 1137
BstF5I	GGATG	8 cut(s)	36, 72, 216, 307, 511, 658, 703, 945
BstKTI	GATC	5 cut(s)	112, 229, 818, 904, 1135
BstMAI	GTCTC	2 cut(s)	116, 622
BstMBI	GATC	5 cut(s)	109, 226, 815, 901, 1132
BstMWI	GCNNNNNNNGC	5 cut(s)	177, 183, 192, 507, 674
BstNI	CCWGG	3 cut(s)	182, 461, 639
BstNSI	RCATGY	2 cut(s)	717, 885
BstSCI	CCNGG	4 cut(s)	180, 310, 459, 637
BstSFI	CTRYAG	2 cut(s)	349, 666
BstV1I	GCAGC	2 cut(s)	335, 652
BstX2I	RGATCY	1 cut(s)	901
BstXI	CCANNNNNNTGG	1 cut(s)	1021
BstYI	RGATCY	1 cut(s)	901
BsuI	GTATCC	1 cut(s)	1117
BsuRI	GGCC	4 cut(s)	167, 180, 532, 636
BtsCI	GGATG	8 cut(s)	36, 72, 216, 307, 511, 658, 703, 945
BtsIMutI	CAGTG	1 cut(s)	967
Cac8I	GCNNGC	4 cut(s)	169, 489, 715, 883
Cfr10I	RCCGGY	2 cut(s)	167, 256
Cfr13I	GGNCC	3 cut(s)	129, 531, 635
CpoI	CGGWCCG	1 cut(s)	129
CseI	GACGC	1 cut(s)	184
Csp6I	GTAC	1 cut(s)	31
CspI	CGGWCCG	1 cut(s)	129
CviAII	CATG	7 cut(s)	538, 599, 714, 786, 801, 882, 992
CviQI	GTAC	1 cut(s)	31
DdeI	CTNAG	2 cut(s)	264, 1137
DpnI	GATC	5 cut(s)	111, 228, 817, 903, 1134
DpnII	GATC	5 cut(s)	109, 226, 815, 901, 1132
DraIII	CACNNNGTG	1 cut(s)	962
EaeI	YGGCCR	2 cut(s)	165, 178
Ecl136II	GAGCTC	1 cut(s)	389
Eco130I	CCWWGG	1 cut(s)	621
Eco24I	GRGCYC	1 cut(s)	391
Eco47I	GGWCC	1 cut(s)	129
Eco53kI	GAGCTC	1 cut(s)	389
Eco57I	CTGAAG	1 cut(s)	645
Eco88I	CYCGRG	2 cut(s)	269, 831
EcoICRI	GAGCTC	1 cut(s)	389
EcoRII	CCWGG	3 cut(s)	180, 459, 637
EcoT14I	CCWWGG	1 cut(s)	621
EcoT38I	GRGCYC	1 cut(s)	391
ErhI	CCWWGG	1 cut(s)	621
FaeI	CATG	7 cut(s)	541, 602, 717, 789, 804, 885, 995
FaqI	GGGAC	2 cut(s)	639, 901
FatI	CATG	7 cut(s)	537, 598, 713, 785, 800, 881, 991
FauI	CCCGC	3 cut(s)	238, 878, 924
Fnu4HI	GCNGC	4 cut(s)	178, 193, 349, 666
FokI	GGATG	8 cut(s)	23, 59, 203, 294, 518, 665, 710, 932
FriOI	GRGCYC	1 cut(s)	391
Fsp4HI	GCNGC	4 cut(s)	178, 193, 349, 666
FspBI	CTAG	2 cut(s)	728, 1103
GluI	GCNGC	4 cut(s)	178, 193, 349, 666
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	1 cut(s)	918
HaeIII	GGCC	4 cut(s)	167, 180, 532, 636
HapII	CCGG	5 cut(s)	168, 257, 312, 495, 924
HgaI	GACGC	1 cut(s)	184
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	7 cut(s)	541, 602, 717, 789, 804, 885, 995
HinfI	GANTC	8 cut(s)	19, 124, 134, 146, 645, 774, 995, 1025
HpaII	CCGG	5 cut(s)	168, 257, 312, 495, 924
HphI	GGTGA	2 cut(s)	73, 835
Hpy166II	GTNNAC	4 cut(s)	552, 733, 1044, 1177
Hpy188I	TCNGA	8 cut(s)	18, 91, 114, 129, 283, 327, 415, 1162
Hpy188III	TCNNGA	6 cut(s)	65, 143, 341, 833, 999, 1136
Hpy8I	GTNNAC	4 cut(s)	552, 733, 1044, 1177
Hpy99I	CGWCG	2 cut(s)	71, 212
HpyAV	CCTTC	1 cut(s)	470
HpyCH4III	ACNGT	4 cut(s)	323, 453, 577, 962
HpyCH4IV	ACGT	1 cut(s)	24
HpyCH4V	TGCA	8 cut(s)	351, 436, 668, 713, 717, 761, 881, 1034
HpyF10VI	GCNNNNNNNGC	5 cut(s)	177, 183, 192, 507, 674
HpyF3I	CTNAG	2 cut(s)	264, 1137
HpySE526I	ACGT	1 cut(s)	24
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	7 cut(s)	541, 602, 717, 789, 804, 885, 995
KroI	GCCGGC	1 cut(s)	167
KroNI	GCCGGC	1 cut(s)	169
Kzo9I	GATC	5 cut(s)	109, 226, 815, 901, 1132
LmnI	GCTCC	3 cut(s)	91, 386, 879
Lsp1109I	GCAGC	2 cut(s)	335, 652
LweI	GCATC	4 cut(s)	45, 60, 81, 849
MaeI	CTAG	2 cut(s)	728, 1103
MaeII	ACGT	1 cut(s)	24
MaeIII	GTNAC	3 cut(s)	655, 781, 970
MalI	GATC	5 cut(s)	111, 228, 817, 903, 1134
MboI	GATC	5 cut(s)	109, 226, 815, 901, 1132
MboII	GAAGA	1 cut(s)	1072
MfeI	CAATTG	1 cut(s)	431
MflI	RGATCY	1 cut(s)	901
MhlI	GDGCHC	1 cut(s)	391
MluCI	AATT	8 cut(s)	374, 431, 511, 543, 608, 719, 825, 1163
MlyI	GAGTC	4 cut(s)	118, 143, 654, 1019
MmeI	TCCRAC	1 cut(s)	174
MroNI	GCCGGC	1 cut(s)	167
MseI	TTAA	3 cut(s)	426, 468, 515
MslI	CAYNNNNRTG	2 cut(s)	312, 1019
MspA1I	CMGCKG	2 cut(s)	192, 665
MspI	CCGG	5 cut(s)	168, 257, 312, 495, 924
MspR9I	CCNGG	4 cut(s)	182, 312, 461, 639
MunI	CAATTG	1 cut(s)	431
MvaI	CCWGG	3 cut(s)	182, 461, 639
MwoI	GCNNNNNNNGC	5 cut(s)	177, 183, 192, 507, 674
NaeI	GCCGGC	1 cut(s)	169
NciI	CCSGG	1 cut(s)	312
NdeII	GATC	5 cut(s)	109, 226, 815, 901, 1132
NgoMIV	GCCGGC	1 cut(s)	167
NlaIII	CATG	7 cut(s)	541, 602, 717, 789, 804, 885, 995
NlaIV	GGNNCC	2 cut(s)	63, 141
NmuCI	GTSAC	1 cut(s)	655
NspI	RCATGY	2 cut(s)	717, 885
PaeI	GCATGC	2 cut(s)	717, 885
PaeR7I	CTCGAG	1 cut(s)	831
PcsI	WCGNNNNNNNCGW	1 cut(s)	820
PdiI	GCCGGC	1 cut(s)	169
PfeI	GAWTC	4 cut(s)	19, 146, 774, 995
PflFI	GACNNNGTC	1 cut(s)	133
PkrI	GCNGC	4 cut(s)	179, 194, 350, 667
PleI	GAGTC	4 cut(s)	118, 142, 653, 1019
PpsI	GAGTC	4 cut(s)	118, 142, 653, 1019
Ppu21I	YACGTR	1 cut(s)	25
Psp124BI	GAGCTC	1 cut(s)	391
Psp6I	CCWGG	3 cut(s)	180, 459, 637
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	3 cut(s)	180, 459, 637
PspN4I	GGNNCC	2 cut(s)	63, 141
PspPI	GGNCC	3 cut(s)	129, 531, 635
PstI	CTGCAG	2 cut(s)	353, 670
PsuI	RGATCY	1 cut(s)	901
PsyI	GACNNNGTC	1 cut(s)	133
PvuII	CAGCTG	1 cut(s)	665
RsaI	GTAC	1 cut(s)	32
RsaNI	GTAC	1 cut(s)	31
RseI	CAYNNNNRTG	2 cut(s)	312, 1019
Rsr2I	CGGWCCG	1 cut(s)	129
RsrII	CGGWCCG	1 cut(s)	129
SacI	GAGCTC	1 cut(s)	391
SaqAI	TTAA	3 cut(s)	426, 468, 515
SatI	GCNGC	4 cut(s)	178, 193, 349, 666
Sau3AI	GATC	5 cut(s)	109, 226, 815, 901, 1132
Sau96I	GGNCC	3 cut(s)	129, 531, 635
SchI	GAGTC	4 cut(s)	118, 143, 654, 1019
ScrFI	CCNGG	4 cut(s)	182, 312, 461, 639
SduI	GDGCHC	1 cut(s)	391
SfaNI	GCATC	4 cut(s)	45, 60, 81, 849
SfcI	CTRYAG	2 cut(s)	349, 666
Sfr274I	CTCGAG	1 cut(s)	831
SinI	GGWCC	1 cut(s)	129
SlaI	CTCGAG	1 cut(s)	831
SmiMI	CAYNNNNRTG	2 cut(s)	312, 1019
SmlI	CTYRAG	5 cut(s)	555, 561, 831, 1027, 1049
SmoI	CTYRAG	5 cut(s)	555, 561, 831, 1027, 1049
SphI	GCATGC	2 cut(s)	717, 885
Sse9I	AATT	8 cut(s)	374, 431, 511, 543, 608, 719, 825, 1163
SsiI	CCGC	8 cut(s)	171, 177, 192, 231, 302, 846, 885, 931
SspMI	CTAG	2 cut(s)	728, 1103
SstI	GAGCTC	1 cut(s)	391
StyD4I	CCNGG	4 cut(s)	180, 310, 459, 637
StyI	CCWWGG	1 cut(s)	621
TaaI	ACNGT	4 cut(s)	323, 453, 577, 962
TaiI	ACGT	1 cut(s)	27
TaqI	TCGA	4 cut(s)	225, 236, 814, 832
TaqII	GACCGA	1 cut(s)	146
TasI	AATT	8 cut(s)	374, 431, 511, 543, 608, 719, 825, 1163
TauI	GCSGC	2 cut(s)	180, 195
TfiI	GAWTC	4 cut(s)	19, 146, 774, 995
Tru1I	TTAA	3 cut(s)	426, 468, 515
Tru9I	TTAA	3 cut(s)	426, 468, 515
TscAI	CASTG	1 cut(s)	967
TseFI	GTSAC	1 cut(s)	655
TseI	GCWGC	2 cut(s)	348, 665
Tsp45I	GTSAC	1 cut(s)	655
TspDTI	ATGAA	1 cut(s)	296
TspGWI	ACGGA	1 cut(s)	704
TspRI	CASTG	1 cut(s)	967
Tth111I	GACNNNGTC	1 cut(s)	133
VpaK11BI	GGWCC	1 cut(s)	129
XapI	RAATTY	2 cut(s)	608, 719
XceI	RCATGY	2 cut(s)	717, 885
XhoI	CTCGAG	1 cut(s)	831
XspI	CTAG	2 cut(s)	728, 1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.