FvH4_4g29020

Heat shock protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0001272
Physical Location & Seq
Reverse (-)
29378739 .. 29385236
6498 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29020.t4

Sequence Viewer

Length: 2382 bp
ATGGCTCCTGTTCTGAGCAGAAGCTTATCCACAGCCTCTCTTGCTTCAATTCCTTCCTTCTCACTCAGAAACCCCAACAAGGCCTTCAACCTCAGAACTGCCTTTGTGCCCCAAAATGGGCTCAGAAAGGGCTTCACTTGTGGTGGATTGAAATGGAGGCTTGAGACCAACAAGAGACAAGTCACTGTTCGCTGTGATGCGGCGGTGGCCGACAAAGAGGTCGCCGATGCGCCCGGCGAGGAATTCGAGTACCAAGCCGAGGTCAGTCGGCTAATGGATTTGATAGTGCACAGTCTCTACAGCCACAAGGAGGTGTTCCTTAGGGAGCTTGTTAGTAATGCAAGTGATGCTTTGGACAAGTTGAGATTTTTGAGTGTGACTGAGCCCTCTCTGCTTGGAGATGCTGGAGAGCTACAGATACGCATCAAGCCTGACCCAGAGAATGGGACTATCACTATATCGGATACTGGTATTGGGATGACGAAAGAGGAACTCATTGACTGCCTTGGTACCATTGCTCAGAGTGGTACTTCAAAATTCTTGAAGGCTCTGAAGGAAAACAAGGATCTTGGTGCAGACAATGGTTTGATTGGTCAATTTGGTGTTGGGTTCTATTCGGCTTTTCTTGTTGCTGACAAGGTAGTTGTATCTACAAAAAGCCCAAAGTCAGATAAGCAATATGTCTGGGAATCAGCTGCTGAGAGTAGTTCGTATGTGATTAGGGAAGAAACTGATCCAGAAAATATGATTAGCCGTGGGACGCAGATCACACTGTATTTAAAGCCGGATGACAAGTATGAGTTCTCAGAGCCGGCCAGGATCCAGAGTTTGGTGAAGAATTACTCCCAATTTGTTTCCTTCCCCATCTACACATGGCAAGAAAAATCAAGGACTGTTGAGGTTGAAGAGGAGGAAGAACCAAAAGAAGGTGAAGAAGTAAAGCCAGAGGGTGAGAAGAAAAAGAAGACAATAACTGAGAAGTACTGGGATTGGGAATTAGCCAACGAAACAAAGCCTATATGGATGCGAAATTCAAAGGAAGTAGAAAAAGATGAGTACAATGAATTCTACAAGAAAACATTTAACGAGTTCTTGGATCCACTTGCTCACACTCACTTCACCACTGAGGGTGAGGTGGAATTCAGGAGTGTTCTTTATATTCCTGGGATGGCACCAATGAACAATGAGGATATAGCAAATCCAAAAACAAAGAACATACGATTGTATGTGAAGAGGGTCTTTATCTCAGATGATTTTGATGGTGAACTATTTCCAAGATACCTGAGCTTTGTAAAGGGTGTGGTGGATTCGAACGATCTTCCTCTTAACGTTTCTCGAGAGATTCTTCAAGAAAGTCGAATTGTACGAATTATGAGAAAGAGACTAGTTAGGAAAACATTTGACATGATTCAAGAAGTCTCTGAAAGTGAAAATAAAGAGGATTACAAGAAACTGTGGGAGAACTTTGGCAGGTTTCTCAAGCTGGGTTGTATTGAGGACACTGGAAATCACAAGCGCATAACACCTCTGTTACGGTTTTACACTTCAAAAAGTGAGGAAGAACTAACAAGTTTAGATGAATATGTTGATAACATGCCTGAGACCCAGAAGGCCATCTATTACTTGGCAACAGACAGTCTGAAAAGTGCAAGAAGTGCTCCATTCTTGGAAAAGTTGGTCCAGAAAGATATTGAGGTTTTGTATTTAGTTGAACCTATTGATGAAGTGGCCATCCAGAACCTACAAACCTACAAAGAGAAGAAGTTTGTGGACATTAGCAAGGAAGATTTAGAACTTGGTGATGAGGATGAGGTCAAGGACAGGGAAACTAAACAAGAATACACTCTGCTCTGTGATTGGATAAAGCAACAACTTGGTGATCAGGTTGCAAAAGTCCAAGTCTCGAACCGTCTAAGCTCATCTCCCTGTGTGCTTGTTTCGGGCAAGTTTGGATGGTCTGCTAATATGGAAAGATTGATGAAAGCCCAAGCACTAGGAGATACTTCAAGTTTGGAGTTCATGAGGGGCAGAAGAATATTGGAAATTAACCCAGATCATCCTATCATTAAGGACCTAAATGCTGCTTGCAAGAACTCCCCCGAGAGCACTGAAGCCAAGAGAGCTGTAGCCCTCTTGTTTGACACAGCATTGATCTCCAGTGGATTCACTCCCGACAGCCCAGCTGAGTTGGGAAACAAGATATATGAGATGATGGCAATGGCACTGGGAGGAAGATGGGGTAGACTGGAAGATGAGAAGTCAGAGGCAAAGGCAGCAGATGACGATGCCGCAAACTCTGATGCAAGCACTGTTGAAGCCTCTGAAACACAAGTAATTGAACCATCAGAAGTGAGGGCAGAGAGCGATCCATGGAATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0006970 GO:0007275 GO:0008104 GO:0008144 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009791 GO:0009941 GO:0010035 GO:0010157 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0017076 GO:0030554 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0046983 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418
Pfam Domains
Protein Families
HATPase_c HSP90

Protein Analysis

794

Amino Acids

89.98

Weight (kDa)

4.93

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP90 PF00183 19 - 515 1.1e-196 Hsp90 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 218
Acc36I ACCTGC 1 cut(s) 1461
Acc65I GGTACC 1 cut(s) 509
AccB1I GGYRCC 2 cut(s) 509, 1171
AccB7I CCANNNNNTGG 2 cut(s) 443, 829
AccI GTMKAC 1 cut(s) 2242
AciI CCGC 3 cut(s) 200, 203, 2289
AclI AACGTT 1 cut(s) 1329
AclWI GGATC 7 cut(s) 573, 728, 814, 827, 1091, 1104, 2360
AcoI YGGCCR 3 cut(s) 207, 813, 1728
AcsI RAATTY 5 cut(s) 242, 536, 1030, 1064, 1139
AcuI CTGAAG 2 cut(s) 572, 2130
AfaI GTAC 6 cut(s) 251, 511, 529, 983, 1058, 1365
AfiI CCNNNNNNNGG 8 cut(s) 79, 116, 117, 259, 310, 443, 829, 926
AhlI ACTAGT 1 cut(s) 1384
AjnI CCWGG 2 cut(s) 815, 1162
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AluBI AGCT 9 cut(s) 24, 328, 412, 695, 1287, 1483, 1917, 2123, 2183
AluI AGCT 9 cut(s) 24, 328, 412, 695, 1287, 1483, 1917, 2123, 2183
Alw21I GWGCWC 3 cut(s) 291, 1660, 2108
Alw26I GTCTC 7 cut(s) 158, 169, 299, 1375, 1423, 1595, 1906
Alw44I GTGCAC 1 cut(s) 287
AlwI GGATC 7 cut(s) 573, 728, 814, 827, 1091, 1104, 2360
AlwNI CAGNNNCTG 1 cut(s) 698
Ama87I CYCGRG 2 cut(s) 1335, 2099
AoxI GGCC 5 cut(s) 81, 207, 813, 1611, 1728
ApaLI GTGCAC 1 cut(s) 287
ApeKI GCWGC 3 cut(s) 695, 2081, 2273
ApoI RAATTY 5 cut(s) 242, 536, 1030, 1064, 1139
Asp700I GAANNNNTTC 1 cut(s) 1269
Asp718I GGTACC 1 cut(s) 509
AspLEI GCGC 2 cut(s) 232, 1518
AspS9I GGNCC 2 cut(s) 1678, 2071
AsuC2I CCSGG 1 cut(s) 234
AsuHPI GGTGA 8 cut(s) 844, 941, 962, 1111, 1142, 1274, 1811, 1889
AsuII TTCGAA 1 cut(s) 1310
AvaI CYCGRG 2 cut(s) 1335, 2099
AvaII GGWCC 2 cut(s) 1678, 2071
AxyI CCTNAGG 1 cut(s) 320
BaeGI GKGCMC 2 cut(s) 111, 291
BalI TGGCCA 1 cut(s) 1730
BamHI GGATCC 2 cut(s) 819, 1096
BanI GGYRCC 2 cut(s) 509, 1171
BanII GRGCYC 2 cut(s) 123, 387
BbsI GAAGAC 1 cut(s) 971
Bbv12I GWGCWC 3 cut(s) 291, 1660, 2108
BbvI GCAGC 3 cut(s) 682, 2068, 2285
BccI CCATC 9 cut(s) 872, 1162, 1253, 1622, 1739, 1947, 2206, 2229, 2350
BceAI ACGGC 1 cut(s) 738
BciT130I CCWGG 2 cut(s) 817, 1164
BciVI GTATCC 1 cut(s) 457
BclI TGATCA 1 cut(s) 1879
BcnI CCSGG 1 cut(s) 234
BcoDI GTCTC 7 cut(s) 158, 169, 299, 1375, 1423, 1595, 1906
BcuI ACTAGT 1 cut(s) 1384
BfaI CTAG 2 cut(s) 1385, 1994
BfmI CTRYAG 3 cut(s) 298, 413, 2124
BfuAI ACCTGC 1 cut(s) 1461
BfuI GTATCC 1 cut(s) 457
BisI GCNGC 5 cut(s) 201, 696, 2082, 2274, 2289
BlsI GCNGC 5 cut(s) 202, 697, 2083, 2275, 2290
BmcAI AGTACT 1 cut(s) 983
Bme1390I CCNGG 3 cut(s) 234, 817, 1164
Bme18I GGWCC 2 cut(s) 1678, 2071
BmeT110I CYCGRG 2 cut(s) 1335, 2099
BmgT120I GGNCC 2 cut(s) 1678, 2071
BmiI GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
BmrFI CCNGG 3 cut(s) 234, 817, 1164
BmrI ACTGGG 2 cut(s) 994, 2234
BmsI GCATC 8 cut(s) 187, 217, 337, 391, 432, 1014, 2275, 2290
BmuI ACTGGG 2 cut(s) 994, 2234
BpiI GAAGAC 1 cut(s) 971
BpmI CTGGAG 2 cut(s) 426, 2140
Bpu10I CCTNAGC 1 cut(s) 1283
Bpu14I TTCGAA 1 cut(s) 1310
BpuEI CTTGAG 2 cut(s) 182, 1463
BpuMI CCSGG 1 cut(s) 234
BsaBI GATNNNNATC 1 cut(s) 422
BsaI GGTCTC 2 cut(s) 158, 1595
BsaJI CCNNGG 5 cut(s) 258, 505, 754, 1163, 2369
Bsc4I CCNNNNNNNGG 8 cut(s) 79, 116, 117, 259, 310, 443, 829, 926
Bse118I RCCGGY 1 cut(s) 811
Bse1I ACTGG 6 cut(s) 472, 989, 1507, 2157, 2229, 2250
Bse21I CCTNAGG 1 cut(s) 320
Bse3DI GCAATG 2 cut(s) 513, 2223
Bse8I GATNNNNATC 1 cut(s) 422
BseBI CCWGG 2 cut(s) 817, 1164
BseDI CCNNGG 5 cut(s) 258, 505, 754, 1163, 2369
BseGI GGATG 8 cut(s) 483, 793, 1029, 1173, 1731, 1813, 1958, 2056
BseJI GATNNNNATC 1 cut(s) 422
BseLI CCNNNNNNNGG 8 cut(s) 79, 116, 117, 259, 310, 443, 829, 926
BseMI GCAATG 2 cut(s) 513, 2223
BseNI ACTGG 6 cut(s) 472, 989, 1507, 2157, 2229, 2250
BseRI GAGGAG 1 cut(s) 923
BseSI GKGCMC 2 cut(s) 111, 291
BseXI GCAGC 3 cut(s) 682, 2068, 2285
BseYI CCCAGC 2 cut(s) 1483, 2179
BsgI GTGCAG 1 cut(s) 594
BshFI GGCC 5 cut(s) 83, 209, 815, 1613, 1730
BshNI GGYRCC 2 cut(s) 509, 1171
BsiHKAI GWGCWC 3 cut(s) 291, 1660, 2108
BsiHKCI CYCGRG 2 cut(s) 1335, 2099
BsiSI CCGG 3 cut(s) 234, 785, 812
BslFI GGGAC 2 cut(s) 460, 772
BslI CCNNNNNNNGG 8 cut(s) 79, 116, 117, 259, 310, 443, 829, 926
BsmAI GTCTC 7 cut(s) 158, 169, 299, 1375, 1423, 1595, 1906
BsmFI GGGAC 2 cut(s) 460, 772
BsnI GGCC 5 cut(s) 83, 209, 815, 1613, 1730
Bso31I GGTCTC 2 cut(s) 158, 1595
BsoBI CYCGRG 2 cut(s) 1335, 2099
Bsp119I TTCGAA 1 cut(s) 1310
Bsp1286I GDGCHC 6 cut(s) 111, 123, 291, 387, 1660, 2108
Bsp19I CCATGG 1 cut(s) 2369
BspACI CCGC 3 cut(s) 200, 203, 2289
BspANI GGCC 5 cut(s) 83, 209, 815, 1613, 1730
BspHI TCATGA 1 cut(s) 2019
BspLI GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
BspMI ACCTGC 1 cut(s) 1461
BspPI GGATC 7 cut(s) 573, 728, 814, 827, 1091, 1104, 2360
BspT104I TTCGAA 1 cut(s) 1310
BspT107I GGYRCC 2 cut(s) 509, 1171
BspTNI GGTCTC 2 cut(s) 158, 1595
BsrDI GCAATG 2 cut(s) 513, 2223
BsrFI RCCGGY 1 cut(s) 811
BsrI ACTGG 6 cut(s) 472, 989, 1507, 2157, 2229, 2250
BssAI RCCGGY 1 cut(s) 811
BssECI CCNNGG 5 cut(s) 258, 505, 754, 1163, 2369
BssT1I CCWWGG 2 cut(s) 505, 2369
Bst2UI CCWGG 2 cut(s) 817, 1164
Bst4CI ACNGT 9 cut(s) 187, 293, 774, 895, 1455, 1536, 1637, 1910, 2311
Bst6I CTCTTC 2 cut(s) 900, 1226
BstAPI GCANNNNNTGC 2 cut(s) 347, 1655
BstBI TTCGAA 1 cut(s) 1310
BstC8I GCNNGC 3 cut(s) 813, 2086, 2305
BstDSI CCRYGG 2 cut(s) 754, 2369
BstF5I GGATG 8 cut(s) 483, 793, 1029, 1173, 1731, 1813, 1958, 2056
BstHHI GCGC 2 cut(s) 232, 1518
BstMAI GTCTC 7 cut(s) 158, 169, 299, 1375, 1423, 1595, 1906
BstMWI GCNNNNNNNGC 7 cut(s) 41, 206, 347, 391, 1655, 2120, 2273
BstNI CCWGG 2 cut(s) 817, 1164
BstNSI RCATGY 1 cut(s) 1597
BstSCI CCNGG 3 cut(s) 232, 815, 1162
BstSFI CTRYAG 3 cut(s) 298, 413, 2124
BstSLI GKGCMC 2 cut(s) 111, 291
BstV1I GCAGC 3 cut(s) 682, 2068, 2285
BstV2I GAAGAC 1 cut(s) 971
BstX2I RGATCY 3 cut(s) 565, 819, 1096
BstYI RGATCY 3 cut(s) 565, 819, 1096
Bsu36I CCTNAGG 1 cut(s) 320
BsuI GTATCC 1 cut(s) 457
BsuRI GGCC 5 cut(s) 83, 209, 815, 1613, 1730
BtgI CCRYGG 2 cut(s) 754, 2369
BtsCI GGATG 8 cut(s) 483, 793, 1029, 1173, 1731, 1813, 1958, 2056
BtsIMutI CAGTG 8 cut(s) 183, 770, 1122, 1500, 2106, 2164, 2222, 2307
BveI ACCTGC 1 cut(s) 1461
Cac8I GCNNGC 3 cut(s) 813, 2086, 2305
CaiI CAGNNNCTG 1 cut(s) 698
CciI TCATGA 1 cut(s) 2019
CfoI GCGC 2 cut(s) 232, 1518
Cfr10I RCCGGY 1 cut(s) 811
Cfr13I GGNCC 2 cut(s) 1678, 2071
CseI GACGC 1 cut(s) 769
Csp6I GTAC 6 cut(s) 250, 510, 528, 982, 1057, 1364
CviAII CATG 5 cut(s) 873, 1405, 1594, 2020, 2370
CviQI GTAC 6 cut(s) 250, 510, 528, 982, 1057, 1364
DraI TTTAAA 1 cut(s) 780
DrdI GACNNNNNNGTC 1 cut(s) 218
DseDI GACNNNNNNGTC 1 cut(s) 218
EaeI YGGCCR 3 cut(s) 207, 813, 1728
Eam1104I CTCTTC 2 cut(s) 900, 1226
EarI CTCTTC 2 cut(s) 900, 1226
Eco130I CCWWGG 2 cut(s) 505, 2369
Eco147I AGGCCT 1 cut(s) 83
Eco24I GRGCYC 2 cut(s) 123, 387
Eco31I GGTCTC 2 cut(s) 158, 1595
Eco47I GGWCC 2 cut(s) 1678, 2071
Eco57I CTGAAG 2 cut(s) 572, 2130
Eco81I CCTNAGG 1 cut(s) 320
Eco88I CYCGRG 2 cut(s) 1335, 2099
EcoO109I RGGNCCY 1 cut(s) 2071
EcoRI GAATTC 3 cut(s) 242, 1064, 1139
EcoRII CCWGG 2 cut(s) 815, 1162
EcoT14I CCWWGG 2 cut(s) 505, 2369
EcoT38I GRGCYC 2 cut(s) 123, 387
ErhI CCWWGG 2 cut(s) 505, 2369
FaeI CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
FalI AAGNNNNNCTT 4 cut(s) 334, 366, 1223, 1255
FaqI GGGAC 2 cut(s) 460, 772
FatI CATG 5 cut(s) 872, 1404, 1593, 2019, 2369
FbaI TGATCA 1 cut(s) 1879
FblI GTMKAC 1 cut(s) 2242
Fnu4HI GCNGC 5 cut(s) 201, 696, 2082, 2274, 2289
FokI GGATG 8 cut(s) 490, 800, 1036, 1180, 1718, 1820, 1965, 2043
FriOI GRGCYC 2 cut(s) 123, 387
Fsp4HI GCNGC 5 cut(s) 201, 696, 2082, 2274, 2289
FspBI CTAG 2 cut(s) 1385, 1994
GlaI GCGC 2 cut(s) 231, 1517
GluI GCNGC 5 cut(s) 201, 696, 2082, 2274, 2289
GsaI CCCAGC 2 cut(s) 1487, 2183
GsuI CTGGAG 2 cut(s) 426, 2140
HaeIII GGCC 5 cut(s) 83, 209, 815, 1613, 1730
HapII CCGG 3 cut(s) 234, 785, 812
HgaI GACGC 1 cut(s) 769
HhaI GCGC 2 cut(s) 232, 1518
Hin1II CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
Hin6I GCGC 2 cut(s) 230, 1516
HinP1I GCGC 2 cut(s) 230, 1516
HindIII AAGCTT 1 cut(s) 22
HinfI GANTC 5 cut(s) 689, 1307, 1342, 1408, 2163
HpaII CCGG 3 cut(s) 234, 785, 812
HphI GGTGA 8 cut(s) 844, 941, 962, 1111, 1142, 1274, 1811, 1889
Hpy166II GTNNAC 4 cut(s) 289, 1265, 1771, 2243
Hpy8I GTNNAC 4 cut(s) 289, 1265, 1771, 2243
HpyAV CCTTC 8 cut(s) 63, 67, 94, 538, 547, 868, 920, 1603
HpyCH4III ACNGT 9 cut(s) 187, 293, 774, 895, 1455, 1536, 1637, 1910, 2311
HpyCH4IV ACGT 1 cut(s) 1329
HpyCH4V TGCA 7 cut(s) 289, 341, 575, 1649, 1889, 2088, 2303
HpyF10VI GCNNNNNNNGC 7 cut(s) 41, 206, 347, 391, 1655, 2120, 2273
HpySE526I ACGT 1 cut(s) 1329
Hsp92II CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
HspAI GCGC 2 cut(s) 230, 1516
KpnI GGTACC 1 cut(s) 513
KroI GCCGGC 1 cut(s) 811
KroNI GCCGGC 1 cut(s) 813
Ksp22I TGATCA 1 cut(s) 1879
LmnI GCTCC 3 cut(s) 10, 325, 1663
Lsp1109I GCAGC 3 cut(s) 682, 2068, 2285
LweI GCATC 8 cut(s) 187, 217, 337, 391, 432, 1014, 2275, 2290
MaeI CTAG 2 cut(s) 1385, 1994
MaeII ACGT 1 cut(s) 1329
MaeIII GTNAC 3 cut(s) 181, 376, 1530
MflI RGATCY 3 cut(s) 565, 819, 1096
MhlI GDGCHC 6 cut(s) 111, 123, 291, 387, 1660, 2108
MlsI TGGCCA 1 cut(s) 1730
MluNI TGGCCA 1 cut(s) 1730
Mox20I TGGCCA 1 cut(s) 1730
MroNI GCCGGC 1 cut(s) 811
MroXI GAANNNNTTC 1 cut(s) 1269
MscI TGGCCA 1 cut(s) 1730
MseI TTAA 6 cut(s) 779, 1083, 1326, 2046, 2067, 2380
Msp20I TGGCCA 1 cut(s) 1730
MspA1I CMGCKG 2 cut(s) 695, 2183
MspI CCGG 3 cut(s) 234, 785, 812
MspR9I CCNGG 3 cut(s) 234, 817, 1164
MvaI CCWGG 2 cut(s) 817, 1164
MwoI GCNNNNNNNGC 7 cut(s) 41, 206, 347, 391, 1655, 2120, 2273
NaeI GCCGGC 1 cut(s) 813
NciI CCSGG 1 cut(s) 234
NcoI CCATGG 1 cut(s) 2369
NgoMIV GCCGGC 1 cut(s) 811
NlaIII CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
NlaIV GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
NmeAIII GCCGAG 1 cut(s) 283
NmuCI GTSAC 2 cut(s) 181, 376
NspI RCATGY 1 cut(s) 1597
NspV TTCGAA 1 cut(s) 1310
PaeR7I CTCGAG 1 cut(s) 1335
PagI TCATGA 1 cut(s) 2019
PceI AGGCCT 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 1363
PdiI GCCGGC 1 cut(s) 813
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 5 cut(s) 689, 1307, 1342, 1408, 2163
PflMI CCANNNNNTGG 2 cut(s) 443, 829
PkrI GCNGC 5 cut(s) 202, 697, 2083, 2275, 2290
PpuMI RGGWCCY 1 cut(s) 2071
Psp1406I AACGTT 1 cut(s) 1329
Psp5II RGGWCCY 1 cut(s) 2071
Psp6I CCWGG 2 cut(s) 815, 1162
PspFI CCCAGC 2 cut(s) 1483, 2179
PspGI CCWGG 2 cut(s) 815, 1162
PspN4I GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
PspPI GGNCC 2 cut(s) 1678, 2071
PspPPI RGGWCCY 1 cut(s) 2071
PstNI CAGNNNCTG 1 cut(s) 698
PsuI RGATCY 3 cut(s) 565, 819, 1096
PvuII CAGCTG 2 cut(s) 695, 2183
RsaI GTAC 6 cut(s) 251, 511, 529, 983, 1058, 1365
RsaNI GTAC 6 cut(s) 250, 510, 528, 982, 1057, 1364
SaqAI TTAA 6 cut(s) 779, 1083, 1326, 2046, 2067, 2380
SatI GCNGC 5 cut(s) 201, 696, 2082, 2274, 2289
Sau96I GGNCC 2 cut(s) 1678, 2071
ScaI AGTACT 1 cut(s) 983
ScrFI CCNGG 3 cut(s) 234, 817, 1164
SduI GDGCHC 6 cut(s) 111, 123, 291, 387, 1660, 2108
SfaNI GCATC 8 cut(s) 187, 217, 337, 391, 432, 1014, 2275, 2290
SfcI CTRYAG 3 cut(s) 298, 413, 2124
Sfr274I CTCGAG 1 cut(s) 1335
SfuI TTCGAA 1 cut(s) 1310
SinI GGWCC 2 cut(s) 1678, 2071
SlaI CTCGAG 1 cut(s) 1335
SmlI CTYRAG 3 cut(s) 161, 1335, 1478
SmoI CTYRAG 3 cut(s) 161, 1335, 1478
SpeI ACTAGT 1 cut(s) 1384
SseBI AGGCCT 1 cut(s) 83
SsiI CCGC 3 cut(s) 200, 203, 2289
SspI AATATT 1 cut(s) 2037
SspMI CTAG 2 cut(s) 1385, 1994
StuI AGGCCT 1 cut(s) 83
StyD4I CCNGG 3 cut(s) 232, 815, 1162
StyI CCWWGG 2 cut(s) 505, 2369
TaaI ACNGT 9 cut(s) 187, 293, 774, 895, 1455, 1536, 1637, 1910, 2311
TaiI ACGT 1 cut(s) 1332
TaqI TCGA 5 cut(s) 246, 1310, 1336, 1357, 1904
TatI WGTACW 2 cut(s) 981, 1056
TauI GCSGC 2 cut(s) 203, 2291
TfiI GAWTC 5 cut(s) 689, 1307, 1342, 1408, 2163
Tru1I TTAA 6 cut(s) 779, 1083, 1326, 2046, 2067, 2380
Tru9I TTAA 6 cut(s) 779, 1083, 1326, 2046, 2067, 2380
TscAI CASTG 8 cut(s) 190, 777, 1129, 1507, 2113, 2164, 2229, 2314
TseFI GTSAC 2 cut(s) 181, 376
TseI GCWGC 3 cut(s) 695, 2081, 2273
Tsp45I GTSAC 2 cut(s) 181, 376
TspDTI ATGAA 6 cut(s) 1077, 1193, 1593, 1737, 1994, 2008
TspRI CASTG 8 cut(s) 190, 777, 1129, 1507, 2113, 2164, 2229, 2314
Van91I CCANNNNNTGG 2 cut(s) 443, 829
VneI GTGCAC 1 cut(s) 287
VpaK11BI GGWCC 2 cut(s) 1678, 2071
XapI RAATTY 5 cut(s) 242, 536, 1030, 1064, 1139
XceI RCATGY 1 cut(s) 1597
XcmI CCANNNNNNNNNTGG 1 cut(s) 1621
XhoI CTCGAG 1 cut(s) 1335
XmiI GTMKAC 1 cut(s) 2242
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 2 cut(s) 1385, 1994
ZrmI AGTACT 1 cut(s) 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.