Rh2CG162200

Heat shock protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
14341853 .. 14343439
1587 bp
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UTR
Exon/CDS
Intron
Rh2CG162200.1

Sequence Viewer

Length: 309 bp
ATGGACAAAAACCCCAACAATGCCTTGAACCTCAGAAGTGCCTTTGTGCCCCAAAATGGGCTCAGAAAGGGCTTCGCTTGCGGTGGATTGAAATGGAGGCTTGAGACCCAAAATAGGCAGGTCACTGTTCGCTGCGATGCTGCGGTCGCCGATACGCCCAGTGAGGAATTCCAGTACCAAGCCGAGGTCAATCGGCTAATGGATTTGATAGTGCATAGTCTATATAGCCACAAGAAGGTATTCCTTAGGGAGCGTGTTAGTAATGCAAGTGATGCTTTGGACAAGTTGAGATTTTTTGAGTGTGACTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

11.7

Weight (kDa)

8.54

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 109
AciI CCGC 2 cut(s) 81, 143
AcsI RAATTY 1 cut(s) 167
AfaI GTAC 1 cut(s) 176
AfiI CCNNNNNNNGG 5 cut(s) 56, 57, 114, 184, 235
AgsI TTSAA 2 cut(s) 28, 91
Alw26I GTCTC 1 cut(s) 98
ApeKI GCWGC 2 cut(s) 132, 140
ApoI RAATTY 1 cut(s) 167
Asp700I GAANNNNTTC 1 cut(s) 239
AxyI CCTNAGG 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 51
BanII GRGCYC 1 cut(s) 63
BbvI GCAGC 2 cut(s) 119, 127
BcoDI GTCTC 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 109
BisI GCNGC 2 cut(s) 133, 141
BlsI GCNGC 2 cut(s) 134, 142
BmrI ACTGGG 1 cut(s) 153
BmsI GCATC 2 cut(s) 127, 262
BmuI ACTGGG 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 183
Bsc4I CCNNNNNNNGG 5 cut(s) 56, 57, 114, 184, 235
Bse1I ACTGG 2 cut(s) 159, 172
Bse21I CCTNAGG 1 cut(s) 245
BseDI CCNNGG 1 cut(s) 183
BseLI CCNNNNNNNGG 5 cut(s) 56, 57, 114, 184, 235
BseMII CTCAG 2 cut(s) 46, 76
BseNI ACTGG 2 cut(s) 159, 172
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 2 cut(s) 119, 127
Bsh1285I CGRYCG 1 cut(s) 147
BsiEI CGRYCG 1 cut(s) 147
BslI CCNNNNNNNGG 5 cut(s) 56, 57, 114, 184, 235
BsmAI GTCTC 1 cut(s) 98
Bso31I GGTCTC 1 cut(s) 98
Bsp1286I GDGCHC 2 cut(s) 51, 63
BspACI CCGC 2 cut(s) 81, 143
BspCNI CTCAG 2 cut(s) 45, 75
BspMI ACCTGC 1 cut(s) 109
BspTNI GGTCTC 1 cut(s) 98
BsrI ACTGG 2 cut(s) 159, 172
BssECI CCNNGG 1 cut(s) 183
Bst4CI ACNGT 1 cut(s) 127
BstAPI GCANNNNNTGC 1 cut(s) 272
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 3 cut(s) 32, 62, 245
BstMAI GTCTC 1 cut(s) 98
BstMCI CGRYCG 1 cut(s) 147
BstMWI GCNNNNNNNGC 3 cut(s) 78, 146, 272
BstSLI GKGCMC 1 cut(s) 51
BstV1I GCAGC 2 cut(s) 119, 127
Bsu36I CCTNAGG 1 cut(s) 245
BtgZI GCGATG 1 cut(s) 150
BtsIMutI CAGTG 2 cut(s) 123, 166
BveI ACCTGC 1 cut(s) 109
Cac8I GCNNGC 1 cut(s) 79
Csp6I GTAC 1 cut(s) 175
CviJI RGCY 6 cut(s) 61, 72, 100, 182, 196, 228
CviKI_1 RGCY 6 cut(s) 61, 72, 100, 182, 196, 228
CviQI GTAC 1 cut(s) 175
DdeI CTNAG 3 cut(s) 32, 62, 245
Eco24I GRGCYC 1 cut(s) 63
Eco31I GGTCTC 1 cut(s) 98
Eco81I CCTNAGG 1 cut(s) 245
EcoRI GAATTC 1 cut(s) 167
EcoT38I GRGCYC 1 cut(s) 63
FaiI YATR 3 cut(s) 216, 223, 225
FalI AAGNNNNNCTT 2 cut(s) 259, 291
Fnu4HI GCNGC 2 cut(s) 133, 141
FriOI GRGCYC 1 cut(s) 63
Fsp4HI GCNGC 2 cut(s) 133, 141
GluI GCNGC 2 cut(s) 133, 141
Hpy188I TCNGA 2 cut(s) 35, 65
HpyAV CCTTC 1 cut(s) 229
HpyCH4III ACNGT 1 cut(s) 127
HpyCH4V TGCA 2 cut(s) 214, 266
HpyF10VI GCNNNNNNNGC 3 cut(s) 78, 146, 272
HpyF3I CTNAG 3 cut(s) 32, 62, 245
LmnI GCTCC 1 cut(s) 250
LpnPI CCDG 3 cut(s) 104, 172, 185
Lsp1109I GCAGC 2 cut(s) 119, 127
LweI GCATC 2 cut(s) 127, 262
MaeIII GTNAC 2 cut(s) 121, 302
MhlI GDGCHC 2 cut(s) 51, 63
MluCI AATT 1 cut(s) 167
MnlI CCTC 4 cut(s) 41, 90, 157, 178
MroXI GAANNNNTTC 1 cut(s) 239
MwoI GCNNNNNNNGC 3 cut(s) 78, 146, 272
NmeAIII GCCGAG 1 cut(s) 208
NmuCI GTSAC 2 cut(s) 121, 302
PdmI GAANNNNTTC 1 cut(s) 239
PkrI GCNGC 2 cut(s) 134, 142
RsaI GTAC 1 cut(s) 176
RsaNI GTAC 1 cut(s) 175
SatI GCNGC 2 cut(s) 133, 141
SduI GDGCHC 2 cut(s) 51, 63
SetI ASST 4 cut(s) 33, 123, 189, 240
SfaNI GCATC 2 cut(s) 127, 262
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
Sse9I AATT 1 cut(s) 167
SsiI CCGC 2 cut(s) 81, 143
TaaI ACNGT 1 cut(s) 127
TasI AATT 1 cut(s) 167
TscAI CASTG 2 cut(s) 130, 166
TseFI GTSAC 2 cut(s) 121, 302
TseI GCWGC 2 cut(s) 132, 140
Tsp45I GTSAC 2 cut(s) 121, 302
TspRI CASTG 2 cut(s) 130, 166
XapI RAATTY 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.