Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000451.1

Orthogroup ID

OG0001272

Physical Location & Seq

Genomic Coordinates Reverse (-)

3398 .. 9948

Gene Structure 6551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000451.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

atggctgtagaactcgtgtggaaaggaatagagattaagtttgcaaacaatctttggcatttgagaagcattgacatttcaagcaattcttttgttggggaaattccggaaagcatcacgagtatgcaaaagttgatttctctcaacctctcaagaaacaaatttacaggaaaacttcctgaaaacttcgggaacatgaagaagttagaatctcttgatttgtcaagaaaccagatatctggtctaattccttccagttttacgagcttgaattttcttggagtcttggacttgtcatacaaccaattgtctggaagaattccagtaagcacccaacttcagagtttcgatgcttctaaatatatgggaaatcttggactctgcggaccaccactctcaccaaattgccccggagatggaacagttcaagataatggaatcgcgagaggaaatgaaattgataacaaagaacaggttaatgatggtctcaaccttggattctttattagtgcagtgctgggatttgtcactggattttggatggtctgcggcagcttactgcttaagacttcttggagatatgcttatttcagattcctggacaatgcaaaagattggatctatgccaaaactgctgtgtacaaggcaaaaggcttcagtctttttccctcttacagcctcaattcgctctcagagagactctctctctctctctcgcccgagctccgagtcatatctgctgtctcgactaccgccgacgtcgacagagacccagatatagccaagcacgcccagaagggtcaatttaccgcaactggagttctctcggagcttcaaatcgtcgccggctgcttctatagggcatcatcatctccttctaacacccgacctcctgttcagcacttctgctggtcagctctgactccgactccgaatcccatactgagctgcttctcctccaaaattaaaaggccttcggttcgagtgacttcggagttcgacagcgactcgtcggtcttcttccacaaggtgtcttgcaagctgttggatagcctggccaagctgaaggtgtcgttcaacaacgaacacaagggcgaggtgtctccgcctcatgtgtcatttatctctcaatacctctccattcactacaacttcgaagatcagtctaccctcctcaacagctccgtcgatgttggtcccagattgcaattccgtgcttcccatgatctcaaggcacaacaaggagaggcgactatggttgccaagcttgctgaccctggatatgcatttcaactctcttcttctttcccttctactggtttggatgaggagttgtcttttatcccatctatttctctgccttcaaatgcattgtcatttgcttttaagcatcgcttcggtccttcagacaagttgagggatactggtattgggatgacgaaggaggaactcattgactgccttggtaccattgctcagagtggtacttcaaaattcttgacggctctgaaggggttgatgttaaacaaggaagggtatgcttctataggaggtggttcacccttgtgtaagatgacagatgagcaggcaaatgcactgaaaatggctttggaatcaaaggacatgccggtgaatgtctatgtgggaatgcggtactggttcccgttcactgaggaagcagttcatcaacttcgggactcaacaaatacatgtaaccctttatatgactgcaattgcttcccagtccactttggtgcaaaaacctattgtcaaggtcttaccagaaaatggcctggaggtaaaagaactcgtgatactccatatgaagttaaagtgactatcccaatagagggttatgagcctgtccagtttattcttgccaaaatgtgtggtaagcttatattgctgtcactgaggatcttccctctgtttcaaatcatgaaggggcaccctaaaccctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009528 GO:0009536 GO:0009706 GO:0009707 GO:0009941 GO:0015075 GO:0015267 GO:0015318 GO:0016020 GO:0016021 GO:0019866 GO:0019867 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0034220 GO:0042170 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

653

Amino Acids

72.15

Weight (kDa)

8.66

Isoelectric Point (pI)

40.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001272)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04030 AT2G04030
fragaria_vesca	FvH4_4g29020 FvH4_4g29020
malus_domestica	MD13G1055300.v1.1 MD16G1054100.v1.1
prunus_persica	Prupe.1G295600_v2.0.a1
pyrus_communis	pycom16g04710
rosa_chinensis	RchiOBHm_Chr2g0102611 RchiOBHm_Chr2g0102621 RchiOBHm_Chr4g0437121 RchiOBHm_Chr6g0247561
rosa_laevigata	RLG00000031307 RLG00000031514 RLG00000035259
rosa_multiflora	Rmu_sc0000081.1_g000011 Rmu_sc0000082.1_g000018 Rmu_sc0004671.1_g000001 Rmu_sc0015724.1_g000001 Rmu_ssc0000006.1_g000007 Rmu_ssc0000451.1_g000002
rosa_roxburghii	Rroxscaffold_2G00110100 Rroxscaffold_2G00153330 Rroxscaffold_5G00378190 Rroxscaffold_6G00388360
rosa_rugosa	Rorug02G0184900 Rorug04G0298200 Rorug05G0411600 Rorug05G0445800.1 Rorug07G0145900.1
rosa_samantha	Rh1AG407900 Rh1AG446200 Rh1CG270300 Rh2AG219900 Rh2AG346800 Rh2CG162200 Rh2CG583400 Rh2DG226200 Rh3CG308200 Rh3DG115400 Rh4AG029500 Rh4AG299500 Rh4AG353000 Rh4BG306400 Rh4BG362500 Rh4CG376700 Rh4DG356500 Rh5AG186500 Rh5BG542300 Rh5DG106600 Rh5DG106700 Rh6CG106400
rosa_wichuraiana	Rw2G017120 Rw3G013500 Rw4G030910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1013
AatII	GACGTC	1 cut(s)	762
Acc65I	GGTACC	1 cut(s)	1466
AccB1I	GGYRCC	2 cut(s)	1466, 1947
AccB7I	CCANNNNNTGG	1 cut(s)	1788
AccI	GTMKAC	2 cut(s)	762, 1166
AccII	CGCG	1 cut(s)	443
AccIII	TCCGGA	1 cut(s)	106
AciI	CCGC	6 cut(s)	384, 549, 753, 810, 1106, 1651
AclWI	GGATC	2 cut(s)	626, 1925
AcoI	YGGCCR	1 cut(s)	1056
AcsI	RAATTY	5 cut(s)	102, 161, 271, 318, 1493
AcuI	CTGAAG	5 cut(s)	323, 640, 1085, 1389, 1529
AcyI	GRCGYC	1 cut(s)	759
AdeI	CACNNNGTG	1 cut(s)	1030
AfaI	GTAC	4 cut(s)	641, 1468, 1486, 1655
AfiI	CCNNNNNNNGG	5 cut(s)	416, 1316, 1788, 1849, 1850
AflII	CTTAAG	1 cut(s)	563
AflIII	ACRYGT	1 cut(s)	1709
AgsI	TTSAA	9 cut(s)	81, 271, 428, 836, 1078, 1292, 1365, 1491, 1934
AjnI	CCWGG	4 cut(s)	597, 1053, 1276, 1792
AjuI	GAANNNNNNNTTGG	2 cut(s)	1592, 1624
AleI	CACNNNNGTG	2 cut(s)	1564, 1752
Alw21I	GWGCWC	1 cut(s)	726
Alw26I	GTCTC	5 cut(s)	491, 691, 748, 762, 1107
AlwI	GGATC	2 cut(s)	626, 1925
Ama87I	CYCGRG	1 cut(s)	719
Aor13HI	TCCGGA	1 cut(s)	106
AoxI	GGCC	3 cut(s)	971, 1056, 1790
ApeKI	GCWGC	3 cut(s)	552, 849, 948
ApoI	RAATTY	5 cut(s)	102, 161, 271, 318, 1493
ArsI	GACNNNNNNTTYG	2 cut(s)	1358, 1390
Asp700I	GAANNNNTTC	1 cut(s)	1680
Asp718I	GGTACC	1 cut(s)	1466
AspS9I	GGNCC	3 cut(s)	386, 1196, 1400
AsuC2I	CCSGG	1 cut(s)	411
AsuHPI	GGTGA	3 cut(s)	390, 1551, 1642
AsuII	TTCGAA	1 cut(s)	1155
AvaI	CYCGRG	1 cut(s)	719
AvaII	GGWCC	3 cut(s)	386, 1196, 1400
BaeGI	GKGCMC	1 cut(s)	1950
BalI	TGGCCA	1 cut(s)	1058
BanI	GGYRCC	2 cut(s)	1466, 1947
BanII	GRGCYC	1 cut(s)	726
BauI	CACGAG	3 cut(s)	14, 118, 1809
BbsI	GAAGAC	1 cut(s)	1009
Bbv12I	GWGCWC	1 cut(s)	726
BbvI	GCAGC	3 cut(s)	564, 836, 935
BccI	CCATC	4 cut(s)	410, 476, 535, 1354
BceAI	ACGGC	1 cut(s)	1518
BciT130I	CCWGG	4 cut(s)	599, 1055, 1278, 1794
BciVI	GTATCC	1 cut(s)	1414
BcnI	CCSGG	1 cut(s)	411
BcoDI	GTCTC	5 cut(s)	491, 691, 748, 762, 1107
BfmI	CTRYAG	3 cut(s)	6, 856, 1545
BfrI	CTTAAG	1 cut(s)	563
BfuI	GTATCC	1 cut(s)	1414
BisI	GCNGC	4 cut(s)	550, 553, 850, 949
BlsI	GCNGC	4 cut(s)	551, 554, 851, 950
Bme1390I	CCNGG	5 cut(s)	411, 599, 1055, 1278, 1794
Bme18I	GGWCC	3 cut(s)	386, 1196, 1400
BmeT110I	CYCGRG	1 cut(s)	719
BmgT120I	GGNCC	3 cut(s)	386, 1196, 1400
BmiI	GGNNCC	4 cut(s)	1198, 1468, 1661, 1949
BmrFI	CCNGG	5 cut(s)	411, 599, 1055, 1278, 1794
BmrI	ACTGGG	1 cut(s)	1736
BmsI	GCATC	4 cut(s)	123, 340, 872, 1399
BmuI	ACTGGG	1 cut(s)	1736
BpiI	GAAGAC	1 cut(s)	1009
BplI	GAGNNNNNCTC	4 cut(s)	686, 718, 688, 720
BpmI	CTGGAG	2 cut(s)	837, 1815
Bpu14I	TTCGAA	1 cut(s)	1155
BpuEI	CTTGAG	2 cut(s)	136, 1214
BpuMI	CCSGG	1 cut(s)	411
BsaHI	GRCGYC	1 cut(s)	759
BsaI	GGTCTC	2 cut(s)	491, 762
BsaJI	CCNNGG	4 cut(s)	409, 493, 1276, 1462
BsaWI	WCCGGW	1 cut(s)	106
BsaXI	ACNNNNNCTCC	4 cut(s)	874, 904, 913, 943
Bsc4I	CCNNNNNNNGG	5 cut(s)	416, 1316, 1788, 1849, 1850
Bse118I	RCCGGY	2 cut(s)	845, 1627
Bse1I	ACTGG	9 cut(s)	255, 323, 535, 820, 1321, 1429, 1661, 1742, 1867
Bse3DI	GCAATG	1 cut(s)	1470
BseAI	TCCGGA	1 cut(s)	106
BseBI	CCWGG	4 cut(s)	599, 1055, 1278, 1794
BseDI	CCNNGG	4 cut(s)	409, 493, 1276, 1462
BseGI	GGATG	3 cut(s)	546, 1330, 1440
BseLI	CCNNNNNNNGG	5 cut(s)	416, 1316, 1788, 1849, 1850
BseMI	GCAATG	1 cut(s)	1470
BseMII	CTCAG	5 cut(s)	705, 935, 1490, 1662, 1904
BseNI	ACTGG	9 cut(s)	255, 323, 535, 820, 1321, 1429, 1661, 1742, 1867
BseRI	GAGGAG	3 cut(s)	946, 1163, 1343
BseSI	GKGCMC	1 cut(s)	1950
BseXI	GCAGC	3 cut(s)	564, 836, 935
BseYI	CCCAGC	1 cut(s)	517
BsgI	GTGCAG	1 cut(s)	531
Bsh1236I	CGCG	1 cut(s)	443
BshFI	GGCC	3 cut(s)	973, 1058, 1792
BshNI	GGYRCC	2 cut(s)	1466, 1947
BsiHKAI	GWGCWC	1 cut(s)	726
BsiHKCI	CYCGRG	1 cut(s)	719
BsiSI	CCGG	4 cut(s)	107, 411, 846, 1628
BslFI	GGGAC	2 cut(s)	1182, 1709
BslI	CCNNNNNNNGG	5 cut(s)	416, 1316, 1788, 1849, 1850
BsmAI	GTCTC	5 cut(s)	491, 691, 748, 762, 1107
BsmFI	GGGAC	2 cut(s)	1182, 1709
BsmI	GAATGC	1 cut(s)	1653
BsnI	GGCC	3 cut(s)	973, 1058, 1792
Bso31I	GGTCTC	2 cut(s)	491, 762
BsoBI	CYCGRG	1 cut(s)	719
Bsp119I	TTCGAA	1 cut(s)	1155
Bsp1286I	GDGCHC	2 cut(s)	726, 1950
Bsp13I	TCCGGA	1 cut(s)	106
Bsp1407I	TGTACA	1 cut(s)	639
Bsp143I	GATC	4 cut(s)	618, 1159, 1225, 1917
Bsp68I	TCGCGA	1 cut(s)	443
BspACI	CCGC	6 cut(s)	384, 549, 753, 810, 1106, 1651
BspANI	GGCC	3 cut(s)	973, 1058, 1792
BspCNI	CTCAG	5 cut(s)	704, 936, 1489, 1663, 1905
BspEI	TCCGGA	1 cut(s)	106
BspFNI	CGCG	1 cut(s)	443
BspHI	TCATGA	1 cut(s)	1938
BspLI	GGNNCC	4 cut(s)	1198, 1468, 1661, 1949
BspPI	GGATC	2 cut(s)	626, 1925
BspT104I	TTCGAA	1 cut(s)	1155
BspT107I	GGYRCC	2 cut(s)	1466, 1947
BspTI	CTTAAG	1 cut(s)	563
BspTNI	GGTCTC	2 cut(s)	491, 762
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	2 cut(s)	845, 1627
BsrGI	TGTACA	1 cut(s)	639
BsrI	ACTGG	9 cut(s)	255, 323, 535, 820, 1321, 1429, 1661, 1742, 1867
BssAI	RCCGGY	2 cut(s)	845, 1627
BssECI	CCNNGG	4 cut(s)	409, 493, 1276, 1462
BssMI	GATC	4 cut(s)	618, 1159, 1225, 1917
BssNI	GRCGYC	1 cut(s)	759
BssSI	CACGAG	3 cut(s)	14, 118, 1809
BssT1I	CCWWGG	2 cut(s)	493, 1462
Bst2BI	CACGAG	3 cut(s)	14, 118, 1809
Bst2UI	CCWGG	4 cut(s)	599, 1055, 1278, 1794
Bst4CI	ACNGT	1 cut(s)	424
Bst6I	CTCTTC	1 cut(s)	1303
BstACI	GRCGYC	1 cut(s)	759
BstAFI	CTTAAG	1 cut(s)	563
BstAUI	TGTACA	1 cut(s)	639
BstBI	TTCGAA	1 cut(s)	1155
BstC8I	GCNNGC	5 cut(s)	789, 847, 1040, 1269, 1587
BstDEI	CTNAG	5 cut(s)	691, 944, 1476, 1671, 1913
BstF5I	GGATG	3 cut(s)	546, 1330, 1440
BstFNI	CGCG	1 cut(s)	443
BstKTI	GATC	4 cut(s)	621, 1162, 1228, 1920
BstMAI	GTCTC	5 cut(s)	491, 691, 748, 762, 1107
BstMBI	GATC	4 cut(s)	618, 1159, 1225, 1917
BstMWI	GCNNNNNNNGC	4 cut(s)	632, 788, 1268, 1903
BstNI	CCWGG	4 cut(s)	599, 1055, 1278, 1794
BstNSI	RCATGY	2 cut(s)	1627, 1713
BstSCI	CCNGG	5 cut(s)	409, 597, 1053, 1276, 1792
BstSFI	CTRYAG	3 cut(s)	6, 856, 1545
BstSLI	GKGCMC	1 cut(s)	1950
BstUI	CGCG	1 cut(s)	443
BstV1I	GCAGC	3 cut(s)	564, 836, 935
BstV2I	GAAGAC	1 cut(s)	1009
BstX2I	RGATCY	2 cut(s)	618, 1917
BstXI	CCANNNNNNTGG	2 cut(s)	239, 311
BstYI	RGATCY	2 cut(s)	618, 1917
BsuI	GTATCC	1 cut(s)	1414
BsuRI	GGCC	3 cut(s)	973, 1058, 1792
BtgZI	GCGATG	1 cut(s)	1376
BtsCI	GGATG	3 cut(s)	546, 1330, 1440
BtsI	GCAGTG	1 cut(s)	519
BtsIMutI	CAGTG	5 cut(s)	519, 528, 1595, 1668, 1910
BtuMI	TCGCGA	1 cut(s)	443
Cac8I	GCNNGC	5 cut(s)	789, 847, 1040, 1269, 1587
CciI	TCATGA	1 cut(s)	1938
Cfr10I	RCCGGY	2 cut(s)	845, 1627
Cfr13I	GGNCC	3 cut(s)	386, 1196, 1400
Csp6I	GTAC	4 cut(s)	640, 1467, 1485, 1654
CspCI	CAANNNNNGTGG	2 cut(s)	1870, 1905
CviAII	CATG	6 cut(s)	196, 1112, 1223, 1624, 1710, 1939
CviQI	GTAC	4 cut(s)	640, 1467, 1485, 1654
DdeI	CTNAG	5 cut(s)	691, 944, 1476, 1671, 1913
DpnI	GATC	4 cut(s)	620, 1161, 1227, 1919
DpnII	GATC	4 cut(s)	618, 1159, 1225, 1917
DraIII	CACNNNGTG	1 cut(s)	1030
DrdI	GACNNNNNNGTC	1 cut(s)	1013
DseDI	GACNNNNNNGTC	1 cut(s)	1013
EaeI	YGGCCR	1 cut(s)	1056
Eam1104I	CTCTTC	1 cut(s)	1303
EarI	CTCTTC	1 cut(s)	1303
EciI	GGCGGA	1 cut(s)	1095
Ecl136II	GAGCTC	1 cut(s)	724
Eco130I	CCWWGG	2 cut(s)	493, 1462
Eco147I	AGGCCT	1 cut(s)	973
Eco24I	GRGCYC	1 cut(s)	726
Eco31I	GGTCTC	2 cut(s)	491, 762
Eco32I	GATATC	1 cut(s)	237
Eco47I	GGWCC	3 cut(s)	386, 1196, 1400
Eco53kI	GAGCTC	1 cut(s)	724
Eco57I	CTGAAG	5 cut(s)	323, 640, 1085, 1389, 1529
Eco88I	CYCGRG	1 cut(s)	719
EcoICRI	GAGCTC	1 cut(s)	724
EcoRI	GAATTC	1 cut(s)	318
EcoRII	CCWGG	4 cut(s)	597, 1053, 1276, 1792
EcoRV	GATATC	1 cut(s)	237
EcoT14I	CCWWGG	2 cut(s)	493, 1462
EcoT22I	ATGCAT	2 cut(s)	1288, 1372
EcoT38I	GRGCYC	1 cut(s)	726
ErhI	CCWWGG	2 cut(s)	493, 1462
FaeI	CATG	6 cut(s)	199, 1115, 1226, 1627, 1713, 1942
FalI	AAGNNNNNCTT	4 cut(s)	73, 105, 1379, 1411
FaqI	GGGAC	2 cut(s)	1182, 1709
FatI	CATG	6 cut(s)	195, 1111, 1222, 1623, 1709, 1938
FauNDI	CATATG	1 cut(s)	1822
FblI	GTMKAC	2 cut(s)	762, 1166
Fnu4HI	GCNGC	4 cut(s)	550, 553, 850, 949
FokI	GGATG	3 cut(s)	553, 1337, 1447
FriOI	GRGCYC	1 cut(s)	726
Fsp4HI	GCNGC	4 cut(s)	550, 553, 850, 949
GluI	GCNGC	4 cut(s)	550, 553, 850, 949
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	2 cut(s)	837, 1815
HaeIII	GGCC	3 cut(s)	973, 1058, 1792
HapII	CCGG	4 cut(s)	107, 411, 846, 1628
Hin1I	GRCGYC	1 cut(s)	759
Hin1II	CATG	6 cut(s)	199, 1115, 1226, 1627, 1713, 1942
HincII	GTYRAC	1 cut(s)	763
HindII	GTYRAC	1 cut(s)	763
HindIII	AAGCTT	2 cut(s)	1265, 1895
HpaII	CCGG	4 cut(s)	107, 411, 846, 1628
HphI	GGTGA	3 cut(s)	390, 1551, 1642
Hpy166II	GTNNAC	6 cut(s)	640, 763, 1167, 1559, 1668, 1747
Hpy8I	GTNNAC	6 cut(s)	640, 763, 1167, 1559, 1668, 1747
Hpy99I	CGWCG	5 cut(s)	761, 764, 845, 1015, 1190
HpyCH4III	ACNGT	1 cut(s)	424
HpyCH4IV	ACGT	1 cut(s)	759
HpyF10VI	GCNNNNNNNGC	4 cut(s)	632, 788, 1268, 1903
HpyF3I	CTNAG	5 cut(s)	691, 944, 1476, 1671, 1913
HpySE526I	ACGT	1 cut(s)	759
Hsp92I	GRCGYC	1 cut(s)	759
Hsp92II	CATG	6 cut(s)	199, 1115, 1226, 1627, 1713, 1942
Kpn2I	TCCGGA	1 cut(s)	106
KpnI	GGTACC	1 cut(s)	1470
KroI	GCCGGC	1 cut(s)	845
KroNI	GCCGGC	1 cut(s)	847
Kzo9I	GATC	4 cut(s)	618, 1159, 1225, 1917
LmnI	GCTCC	3 cut(s)	729, 829, 1187
Lsp1109I	GCAGC	3 cut(s)	564, 836, 935
LweI	GCATC	4 cut(s)	123, 340, 872, 1399
MaeII	ACGT	1 cut(s)	759
MaeIII	GTNAC	5 cut(s)	526, 985, 1712, 1834, 1908
MalI	GATC	4 cut(s)	620, 1161, 1227, 1919
MboI	GATC	4 cut(s)	618, 1159, 1225, 1917
MboII	GAAGA	8 cut(s)	211, 327, 1009, 1012, 1169, 1290, 1293, 1912
MfeI	CAATTG	2 cut(s)	305, 1732
MflI	RGATCY	2 cut(s)	618, 1917
MhlI	GDGCHC	2 cut(s)	726, 1950
MlsI	TGGCCA	1 cut(s)	1058
MluNI	TGGCCA	1 cut(s)	1058
MlyI	GAGTC	8 cut(s)	291, 372, 693, 738, 916, 922, 1001, 1691
MmeI	TCCRAC	2 cut(s)	950, 1026
Mox20I	TGGCCA	1 cut(s)	1058
Mph1103I	ATGCAT	2 cut(s)	1288, 1372
MroI	TCCGGA	1 cut(s)	106
MroNI	GCCGGC	1 cut(s)	845
MroXI	GAANNNNTTC	1 cut(s)	1680
MscI	TGGCCA	1 cut(s)	1058
MseI	TTAA	7 cut(s)	36, 477, 564, 966, 1386, 1523, 1830
MslI	CAYNNNNRTG	4 cut(s)	122, 1564, 1628, 1752
Msp20I	TGGCCA	1 cut(s)	1058
MspCI	CTTAAG	1 cut(s)	563
MspI	CCGG	4 cut(s)	107, 411, 846, 1628
MspR9I	CCNGG	5 cut(s)	411, 599, 1055, 1278, 1794
MunI	CAATTG	2 cut(s)	305, 1732
Mva1269I	GAATGC	1 cut(s)	1653
MvaI	CCWGG	4 cut(s)	599, 1055, 1278, 1794
MvnI	CGCG	1 cut(s)	443
MwoI	GCNNNNNNNGC	4 cut(s)	632, 788, 1268, 1903
NaeI	GCCGGC	1 cut(s)	847
NciI	CCSGG	1 cut(s)	411
NdeI	CATATG	1 cut(s)	1822
NdeII	GATC	4 cut(s)	618, 1159, 1225, 1917
NgoMIV	GCCGGC	1 cut(s)	845
NlaIII	CATG	6 cut(s)	199, 1115, 1226, 1627, 1713, 1942
NlaIV	GGNNCC	4 cut(s)	1198, 1468, 1661, 1949
NmuCI	GTSAC	4 cut(s)	526, 985, 1834, 1908
NruI	TCGCGA	1 cut(s)	443
NsiI	ATGCAT	2 cut(s)	1288, 1372
NspI	RCATGY	2 cut(s)	1627, 1713
NspV	TTCGAA	1 cut(s)	1155
OliI	CACNNNNGTG	2 cut(s)	1564, 1752
PagI	TCATGA	1 cut(s)	1938
PceI	AGGCCT	1 cut(s)	973
PciI	ACATGT	1 cut(s)	1709
PctI	GAATGC	1 cut(s)	1653
PdiI	GCCGGC	1 cut(s)	847
PdmI	GAANNNNTTC	1 cut(s)	1680
PfeI	GAWTC	6 cut(s)	209, 438, 498, 594, 934, 1613
PflMI	CCANNNNNTGG	1 cut(s)	1788
PfoI	TCCNGGA	1 cut(s)	597
PkrI	GCNGC	4 cut(s)	551, 554, 851, 950
PleI	GAGTC	8 cut(s)	290, 372, 693, 737, 916, 922, 1001, 1691
PpsI	GAGTC	8 cut(s)	290, 372, 693, 737, 916, 922, 1001, 1691
PscI	ACATGT	1 cut(s)	1709
Psp124BI	GAGCTC	1 cut(s)	726
Psp6I	CCWGG	4 cut(s)	597, 1053, 1276, 1792
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	4 cut(s)	597, 1053, 1276, 1792
PspN4I	GGNNCC	4 cut(s)	1198, 1468, 1661, 1949
PspPI	GGNCC	3 cut(s)	386, 1196, 1400
PsrI	GAACNNNNNNTAC	2 cut(s)	1798, 1830
PsuI	RGATCY	2 cut(s)	618, 1917
RruI	TCGCGA	1 cut(s)	443
RsaI	GTAC	4 cut(s)	641, 1468, 1486, 1655
RsaNI	GTAC	4 cut(s)	640, 1467, 1485, 1654
RseI	CAYNNNNRTG	4 cut(s)	122, 1564, 1628, 1752
SacI	GAGCTC	1 cut(s)	726
SalI	GTCGAC	1 cut(s)	761
SaqAI	TTAA	7 cut(s)	36, 477, 564, 966, 1386, 1523, 1830
SatI	GCNGC	4 cut(s)	550, 553, 850, 949
Sau3AI	GATC	4 cut(s)	618, 1159, 1225, 1917
Sau96I	GGNCC	3 cut(s)	386, 1196, 1400
SchI	GAGTC	8 cut(s)	291, 372, 693, 738, 916, 922, 1001, 1691
ScrFI	CCNGG	5 cut(s)	411, 599, 1055, 1278, 1794
SduI	GDGCHC	2 cut(s)	726, 1950
SfaNI	GCATC	4 cut(s)	123, 340, 872, 1399
SfcI	CTRYAG	3 cut(s)	6, 856, 1545
SfuI	TTCGAA	1 cut(s)	1155
SinI	GGWCC	3 cut(s)	386, 1196, 1400
SmiMI	CAYNNNNRTG	4 cut(s)	122, 1564, 1628, 1752
SmlI	CTYRAG	3 cut(s)	151, 563, 1229
SmoI	CTYRAG	3 cut(s)	151, 563, 1229
SseBI	AGGCCT	1 cut(s)	973
SsiI	CCGC	6 cut(s)	384, 549, 753, 810, 1106, 1651
SstI	GAGCTC	1 cut(s)	726
StuI	AGGCCT	1 cut(s)	973
StyD4I	CCNGG	5 cut(s)	409, 597, 1053, 1276, 1792
StyI	CCWWGG	2 cut(s)	493, 1462
TaaI	ACNGT	1 cut(s)	424
TaiI	ACGT	1 cut(s)	762
TaqI	TCGA	7 cut(s)	348, 746, 762, 982, 999, 1155, 1188
TaqII	GACCGA	2 cut(s)	1003, 1388
TatI	WGTACW	1 cut(s)	639
TauI	GCSGC	1 cut(s)	552
TfiI	GAWTC	6 cut(s)	209, 438, 498, 594, 934, 1613
Tru1I	TTAA	7 cut(s)	36, 477, 564, 966, 1386, 1523, 1830
Tru9I	TTAA	7 cut(s)	36, 477, 564, 966, 1386, 1523, 1830
TscAI	CASTG	5 cut(s)	519, 535, 1602, 1675, 1917
TseFI	GTSAC	4 cut(s)	526, 985, 1834, 1908
TseI	GCWGC	3 cut(s)	552, 849, 948
Tsp45I	GTSAC	4 cut(s)	526, 985, 1834, 1908
TspDTI	ATGAA	5 cut(s)	212, 468, 1673, 1839, 1955
TspGWI	ACGGA	2 cut(s)	1174, 1202
TspRI	CASTG	5 cut(s)	519, 535, 1602, 1675, 1917
Van91I	CCANNNNNTGG	1 cut(s)	1788
Vha464I	CTTAAG	1 cut(s)	563
VpaK11BI	GGWCC	3 cut(s)	386, 1196, 1400
XapI	RAATTY	5 cut(s)	102, 161, 271, 318, 1493
XceI	RCATGY	2 cut(s)	1627, 1713
XmiI	GTMKAC	2 cut(s)	762, 1166
XmnI	GAANNNNTTC	1 cut(s)	1680
ZraI	GACGTC	1 cut(s)	760
Zsp2I	ATGCAT	2 cut(s)	1288, 1372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.