Rroxscaffold_6G00388360

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
1225919 .. 1228926
3008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00388360.1

Sequence Viewer

Length: 186 bp
ATGGCTTTGGAATCAAAGGACATACCGGTGAATGTCTATGTGGGAATGCGGTACTGGTTCCCGTTCACCGAGGAAGCAGTTCATCAAGAATCATTGATGGCAAACAAGACAGGGAATCACGTAGAAGAGCATGTAATGGAGCTGGCAACACTACGTACAGCTTCTACTGCATGTAAAGGAAGTTAG

Protein Analysis

61

Amino Acids

6.86

Weight (kDa)

5.44

Isoelectric Point (pI)

48.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 49
AfaI GTAC 2 cut(s) 53, 157
AgeI ACCGGT 1 cut(s) 25
AluBI AGCT 2 cut(s) 142, 161
AluI AGCT 2 cut(s) 142, 161
AsiGI ACCGGT 1 cut(s) 25
Asp700I GAANNNNTTC 1 cut(s) 78
AsuHPI GGTGA 2 cut(s) 40, 58
BccI CCATC 1 cut(s) 91
BmiI GGNNCC 1 cut(s) 59
BsaAI YACGTR 2 cut(s) 121, 155
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 1 cut(s) 25
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 1 cut(s) 59
BseDI CCNNGG 1 cut(s) 69
BseNI ACTGG 1 cut(s) 59
BshTI ACCGGT 1 cut(s) 25
BsiSI CCGG 1 cut(s) 26
BsmI GAATGC 1 cut(s) 51
BspACI CCGC 1 cut(s) 49
BspLI GGNNCC 1 cut(s) 59
BspQI GCTCTTC 1 cut(s) 120
BsrFI RCCGGY 1 cut(s) 25
BsrI ACTGG 1 cut(s) 59
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 1 cut(s) 69
Bst6I CTCTTC 1 cut(s) 120
BstBAI YACGTR 2 cut(s) 121, 155
BstC8I GCNNGC 1 cut(s) 144
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstNSI RCATGY 2 cut(s) 134, 174
BstSNI TACGTA 1 cut(s) 155
Cac8I GCNNGC 1 cut(s) 144
Cfr10I RCCGGY 1 cut(s) 25
Csp6I GTAC 2 cut(s) 52, 156
CspAI ACCGGT 1 cut(s) 25
CviAII CATG 2 cut(s) 131, 171
CviJI RGCY 3 cut(s) 5, 142, 161
CviKI_1 RGCY 3 cut(s) 5, 142, 161
CviQI GTAC 2 cut(s) 52, 156
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
Eco105I TACGTA 1 cut(s) 155
FaeI CATG 2 cut(s) 134, 174
FaiI YATR 4 cut(s) 23, 39, 132, 172
FatI CATG 2 cut(s) 130, 170
HapII CCGG 1 cut(s) 26
Hin1II CATG 2 cut(s) 134, 174
HinfI GANTC 3 cut(s) 11, 89, 115
HpaII CCGG 1 cut(s) 26
HphI GGTGA 2 cut(s) 40, 58
Hpy166II GTNNAC 1 cut(s) 66
Hpy188III TCNNGA 1 cut(s) 86
Hpy8I GTNNAC 1 cut(s) 66
HpyCH4IV ACGT 2 cut(s) 120, 154
HpyCH4V TGCA 1 cut(s) 170
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
HpySE526I ACGT 2 cut(s) 120, 154
Hsp92II CATG 2 cut(s) 134, 174
LguI GCTCTTC 1 cut(s) 120
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 4 cut(s) 39, 40, 96, 128
MaeII ACGT 2 cut(s) 120, 154
MboII GAAGA 1 cut(s) 137
MnlI CCTC 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 78
MslI CAYNNNNRTG 1 cut(s) 26
MspI CCGG 1 cut(s) 26
Mva1269I GAATGC 1 cut(s) 51
MwoI GCNNNNNNNGC 1 cut(s) 167
NlaIII CATG 2 cut(s) 134, 174
NlaIV GGNNCC 1 cut(s) 59
NspI RCATGY 2 cut(s) 134, 174
PciSI GCTCTTC 1 cut(s) 120
PctI GAATGC 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 78
PfeI GAWTC 3 cut(s) 11, 89, 115
PinAI ACCGGT 1 cut(s) 25
Ppu21I YACGTR 2 cut(s) 121, 155
PspN4I GGNNCC 1 cut(s) 59
RsaI GTAC 2 cut(s) 53, 157
RsaNI GTAC 2 cut(s) 52, 156
RseI CAYNNNNRTG 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 120
SetI ASST 4 cut(s) 123, 144, 157, 163
SmiMI CAYNNNNRTG 1 cut(s) 26
SnaBI TACGTA 1 cut(s) 155
SsiI CCGC 1 cut(s) 49
TaiI ACGT 2 cut(s) 123, 157
TfiI GAWTC 3 cut(s) 11, 89, 115
TspDTI ATGAA 1 cut(s) 71
XceI RCATGY 2 cut(s) 134, 174
XmnI GAANNNNTTC 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.