Rh4AG353000

Heat shock protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0001272
Physical Location & Seq
Reverse (-)
66165588 .. 66171164
5577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG353000.1

Sequence Viewer

Length: 2382 bp
ATGGCTCCAGTCCTGAGCAGAAGCTTATCCACAGCCTCTCTTGCTTCACTTCCTTCCTTAACACTCAGAAACCCCAACAAGGTCTTGAACCTCAGAAGTGCCTTTGTGCCCCAAAATGGGCTCAGAAAGGGCTTTGCTTGCGGTGGTTTGAAGTGGAGGCTTGAGACCCAAAATAGGCAGGTCACTGTTCGCTGCGATGCGGCGGTCGCCGAGAAAGAGGTCGCCGATACGCCCGGTGAGGAATTCCAGTACCAAGCCGAGGTCAGTCGGCTAATGGATTTGATAGTGCACAGTCTATACAGCCACAAGGAGGTCTTCCTTAGAGAGCTCGTTAGTAATGCAAGTGATGCTTTGGACAAGTTGAGATTTTTGAGTGTGACTGAGCCCTCGCTGCTTGGAGATGCTGGTGAGCTACAGATACGCATCAAACCCGACCCAGAGAATGGGACTATCACTATAACGGATACTGGTATTGGGATGACGAAAGAGGAACTCATTGACTGCCTTGGTACCATTGCTCAGAGTGGTACTTCAAAATTCTTGACTGCTCTGAAGGAAAATAAGGATCTTGGTGCAGACAATGGTTTGATTGGTCAATTTGGTGTTGGGTTCTATTCTGCTTTTCTTGTTGCTGACAAGGTAGTTGTTTCTACAAAAAGCCCAAAATCAGACAAGCAATACGTCTGGGAATCAGCTGCTGAGAGTAGCTCTTATGTGATTAGGGAAGAAACTGATCCAGAAAATATCATTAGCCGTGGGACGCAGATCAAACTATATTTAAGGCCGGATGACAAGTATGAATTCTCAGAGCCTGCCCGGATCCAGAGTTTGGTGAAGAATTACTCGCAATTTGTTTCTTTCCCCATCTACACATGGCAAGAAAAGTCAAGGACTGTTGAGGTTGAAGAGGAGGAAGAACCAAAGGAAGGAGAAGAACCAAAGCCAGAGGGTGAGAAGAAAAAGAAGACTATAACTGAGAAGTATTGGGATTGGGAATTAGCCAATGAAACAAAGCCTATATGGATGCGGAGTTCAAAGGAAGTAGAAAAAGATGAGTACAATGAATTCTACAAGAAAACATTTAATGAGTTCTTGGATCCACTTGCTTACACTCACTTCACCACTGAGGGTGAGGTGGAATTCAGGAGTGTTCTTTATATTCCTGGGATGGCGCCAATGAACAATGAGGATATAGCAAATCCAAAAACAAAGAACATTCGGTTATATGTGAAGAGGGTCTTTATCTCAGATGATTTTGATGGTGAACTGTTTCCAAGATACCTGAGCTTTGTAAAGGGTGTGGTGGATTCAAATGATCTTCCTCTTAACGTTTCCCGAGAGATTCTTCAAGAAAGTCGAATTGTAAGAATTATGAGAAAGAGACTTGTAAGGAAAACATTCGACATGATTCAAGAACTCTCTGAAAGTGAAAATAAAGAGGATTACAAGAAGTTATGGGAGAACTTCGGCAGGTTTCTGAAGTTGGGTTGTATTGAGGACTCTGGAAATCACAAGCGCATAACACCTCTGTTGCGGTTTTACACTTCAAAAAGTGAGGAAGAACTGACGAGTTTAGATGAATATGTTGAAAACATGCCTGAGACCCAGAATGCCATCTATTACTTGGCAACAGACAGTCTGAAAAGTGCAAGAAGTGCTCCATTCTTGGAAAAGTTGGTTCAGAAAGATATTGAGGTTTTGTATTTAGTTGAACCTATTGATGAAGTGGCCATCCAGAACCTACAAACCTACAAAGAGAAGAAGTTTGTGGACATTAGCAAGGAAGATTTGGAACTTGGTGATGAGGATGAGGTCAAGGACAGGGAGACTAAACAAGAATACACACTGCTCTGTGATTGGATAAAGCAACAACTTGGTGATCAGGTTGCAAAAGTCCAAGTCTCGAAGCGTCTAAGCTCATCTCCTTGTGTTCTTGTTTCGGGCAAGTTTGGATGGTCTGCTAATATGGAAAGATTGATGAAAGCCCAGGCACTTGGAGATACTTCAAGTTTGGAGTTCATGAGGGGCAGGAGAATAATGGAAATTAACCCAGATCATCCTATCATTAAGGACCTAAATGCTGCTTGCAAGAACGCCCCTGAGAGCACTGATGCCAAGAGAGCTGTAGCCCTCTTGTTTGACACAGCATTGATCTCCAGTGGATTCACTCCCGACAGCCCAGCTGAGTTGGGAAACAAGATATATGAGATGATGGCAATGGCCCTTGGAGGAAGATGGGGTAGACTGGAAGATGAGGAGGCAGAGGGAAAGGCAGCAGATGACAATGCCGCAGAATCTGATGCAAGCGCTGGCGAAGCCTCTGAAGCAGAAGTAGTTGAAGCATCAGAAGTGAGGGCAGAGAGCGATCCATGGAGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0006970 GO:0007275 GO:0008104 GO:0008144 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009791 GO:0009941 GO:0010035 GO:0010157 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0017076 GO:0030554 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0046983 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418
Pfam Domains
Protein Families
HATPase_c HSP90

Protein Analysis

793

Amino Acids

89.81

Weight (kDa)

4.87

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c PF02518 105 - 207 1e-06 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3 PF13589 107 - 240 6.7e-09 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90 PF00183 267 - 766 7e-196 Hsp90 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 169, 1461
Acc65I GGTACC 1 cut(s) 509
AccB1I GGYRCC 2 cut(s) 509, 1171
AccB7I CCANNNNNTGG 2 cut(s) 443, 829
AccI GTMKAC 1 cut(s) 2242
AciI CCGC 6 cut(s) 141, 200, 203, 1027, 1534, 2289
AclI AACGTT 1 cut(s) 1329
AclWI GGATC 7 cut(s) 573, 728, 814, 827, 1091, 1104, 2360
AcoI YGGCCR 1 cut(s) 1728
AcsI RAATTY 5 cut(s) 242, 536, 800, 1064, 1139
AcuI CTGAAG 3 cut(s) 572, 1499, 2343
AcyI GRCGYC 1 cut(s) 1172
AfaI GTAC 4 cut(s) 251, 511, 529, 1058
AfeI AGCGCT 1 cut(s) 2308
AfiI CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 829, 926
AjnI CCWGG 2 cut(s) 1162, 1986
AloI GAACNNNNNNTCC 2 cut(s) 1015, 1047
AluBI AGCT 9 cut(s) 24, 328, 412, 695, 708, 1287, 1917, 2123, 2183
AluI AGCT 9 cut(s) 24, 328, 412, 695, 708, 1287, 1917, 2123, 2183
Alw21I GWGCWC 4 cut(s) 291, 330, 1660, 2108
Alw26I GTCTC 5 cut(s) 158, 1375, 1595, 1820, 1906
Alw44I GTGCAC 1 cut(s) 287
AlwI GGATC 7 cut(s) 573, 728, 814, 827, 1091, 1104, 2360
AlwNI CAGNNNCTG 3 cut(s) 698, 812, 2297
Ama87I CYCGRG 1 cut(s) 1335
Aor51HI AGCGCT 1 cut(s) 2308
AoxI GGCC 3 cut(s) 782, 1728, 2220
ApaLI GTGCAC 1 cut(s) 287
ApeKI GCWGC 5 cut(s) 192, 391, 695, 2081, 2273
ApoI RAATTY 5 cut(s) 242, 536, 800, 1064, 1139
Asp700I GAANNNNTTC 2 cut(s) 1269, 1397
Asp718I GGTACC 1 cut(s) 509
AspLEI GCGC 3 cut(s) 1174, 1518, 2309
AspS9I GGNCC 2 cut(s) 2071, 2221
AsuC2I CCSGG 2 cut(s) 234, 817
AsuHPI GGTGA 9 cut(s) 248, 419, 844, 962, 1111, 1142, 1274, 1811, 1889
AvaI CYCGRG 1 cut(s) 1335
AvaII GGWCC 1 cut(s) 2071
BaeGI GKGCMC 2 cut(s) 111, 291
BalI TGGCCA 1 cut(s) 1730
BamHI GGATCC 2 cut(s) 819, 1096
BanI GGYRCC 2 cut(s) 509, 1171
BanII GRGCYC 3 cut(s) 123, 330, 387
BbsI GAAGAC 2 cut(s) 307, 971
Bbv12I GWGCWC 4 cut(s) 291, 330, 1660, 2108
BbvI GCAGC 5 cut(s) 179, 378, 682, 2068, 2285
BccI CCATC 8 cut(s) 872, 1162, 1253, 1622, 1739, 1947, 2206, 2229
BceAI ACGGC 1 cut(s) 738
BciT130I CCWGG 2 cut(s) 1164, 1988
BciVI GTATCC 1 cut(s) 457
BclI TGATCA 1 cut(s) 1879
BcnI CCSGG 2 cut(s) 234, 817
BcoDI GTCTC 5 cut(s) 158, 1375, 1595, 1820, 1906
BfmI CTRYAG 2 cut(s) 413, 2124
BfoI RGCGCY 2 cut(s) 1175, 2310
BfuAI ACCTGC 2 cut(s) 169, 1461
BfuI GTATCC 1 cut(s) 457
BisI GCNGC 7 cut(s) 193, 201, 392, 696, 2082, 2274, 2289
BlsI GCNGC 7 cut(s) 194, 202, 393, 697, 2083, 2275, 2290
Bme1390I CCNGG 4 cut(s) 234, 817, 1164, 1988
Bme18I GGWCC 1 cut(s) 2071
BmeT110I CYCGRG 1 cut(s) 1335
BmgT120I GGNCC 2 cut(s) 2071, 2221
BmiI GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
BmrFI CCNGG 4 cut(s) 234, 817, 1164, 1988
BmsI GCATC 8 cut(s) 187, 337, 391, 432, 1014, 2101, 2290, 2351
BpiI GAAGAC 2 cut(s) 307, 971
BplI GAGNNNNNCTC 2 cut(s) 692, 724
BpmI CTGGAG 1 cut(s) 2140
Bpu10I CCTNAGC 2 cut(s) 14, 1283
BpuEI CTTGAG 1 cut(s) 182
BpuMI CCSGG 2 cut(s) 234, 817
BsaBI GATNNNNATC 1 cut(s) 422
BsaHI GRCGYC 1 cut(s) 1172
BsaI GGTCTC 2 cut(s) 158, 1595
BsaJI CCNNGG 7 cut(s) 258, 505, 754, 1163, 1986, 2224, 2369
Bsc4I CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 829, 926
Bse1I ACTGG 5 cut(s) 8, 247, 472, 2157, 2250
Bse3DI GCAATG 2 cut(s) 513, 2223
Bse8I GATNNNNATC 1 cut(s) 422
BseBI CCWGG 2 cut(s) 1164, 1988
BseDI CCNNGG 7 cut(s) 258, 505, 754, 1163, 1986, 2224, 2369
BseGI GGATG 8 cut(s) 483, 793, 1029, 1173, 1731, 1813, 1958, 2056
BseJI GATNNNNATC 1 cut(s) 422
BseLI CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 829, 926
BseMI GCAATG 2 cut(s) 513, 2223
BseNI ACTGG 5 cut(s) 8, 247, 472, 2157, 2250
BseRI GAGGAG 2 cut(s) 923, 2270
BseSI GKGCMC 2 cut(s) 111, 291
BseXI GCAGC 5 cut(s) 179, 378, 682, 2068, 2285
BseYI CCCAGC 1 cut(s) 2179
BsgI GTGCAG 1 cut(s) 594
Bsh1285I CGRYCG 1 cut(s) 207
BshFI GGCC 3 cut(s) 784, 1730, 2222
BshNI GGYRCC 2 cut(s) 509, 1171
BsiEI CGRYCG 1 cut(s) 207
BsiHKAI GWGCWC 4 cut(s) 291, 330, 1660, 2108
BsiHKCI CYCGRG 1 cut(s) 1335
BsiSI CCGG 3 cut(s) 234, 785, 817
BslFI GGGAC 2 cut(s) 460, 772
BslI CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 829, 926
BsmAI GTCTC 5 cut(s) 158, 1375, 1595, 1820, 1906
BsmFI GGGAC 2 cut(s) 460, 772
BsmI GAATGC 1 cut(s) 1615
BsnI GGCC 3 cut(s) 784, 1730, 2222
Bso31I GGTCTC 2 cut(s) 158, 1595
BsoBI CYCGRG 1 cut(s) 1335
Bsp1286I GDGCHC 7 cut(s) 111, 123, 291, 330, 387, 1660, 2108
Bsp19I CCATGG 1 cut(s) 2369
BspACI CCGC 6 cut(s) 141, 200, 203, 1027, 1534, 2289
BspANI GGCC 3 cut(s) 784, 1730, 2222
BspHI TCATGA 1 cut(s) 2019
BspLI GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
BspMI ACCTGC 2 cut(s) 169, 1461
BspPI GGATC 7 cut(s) 573, 728, 814, 827, 1091, 1104, 2360
BspT107I GGYRCC 2 cut(s) 509, 1171
BspTNI GGTCTC 2 cut(s) 158, 1595
BsrDI GCAATG 2 cut(s) 513, 2223
BsrI ACTGG 5 cut(s) 8, 247, 472, 2157, 2250
BssECI CCNNGG 7 cut(s) 258, 505, 754, 1163, 1986, 2224, 2369
BssNI GRCGYC 1 cut(s) 1172
BssT1I CCWWGG 3 cut(s) 505, 2224, 2369
Bst2UI CCWGG 2 cut(s) 1164, 1988
Bst4CI ACNGT 5 cut(s) 187, 293, 895, 1269, 1637
Bst6I CTCTTC 2 cut(s) 900, 1226
BstACI GRCGYC 1 cut(s) 1172
BstAPI GCANNNNNTGC 2 cut(s) 347, 1655
BstC8I GCNNGC 5 cut(s) 139, 813, 2086, 2305, 2311
BstDSI CCRYGG 2 cut(s) 754, 2369
BstF5I GGATG 8 cut(s) 483, 793, 1029, 1173, 1731, 1813, 1958, 2056
BstH2I RGCGCY 2 cut(s) 1175, 2310
BstHHI GCGC 3 cut(s) 1174, 1518, 2309
BstMAI GTCTC 5 cut(s) 158, 1375, 1595, 1820, 1906
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 9 cut(s) 41, 138, 206, 347, 391, 1655, 2120, 2315, 2324
BstNI CCWGG 2 cut(s) 1164, 1988
BstNSI RCATGY 1 cut(s) 1597
BstSCI CCNGG 4 cut(s) 232, 815, 1162, 1986
BstSFI CTRYAG 2 cut(s) 413, 2124
BstSLI GKGCMC 2 cut(s) 111, 291
BstV1I GCAGC 5 cut(s) 179, 378, 682, 2068, 2285
BstV2I GAAGAC 2 cut(s) 307, 971
BstX2I RGATCY 3 cut(s) 565, 819, 1096
BstXI CCANNNNNNTGG 1 cut(s) 1994
BstYI RGATCY 3 cut(s) 565, 819, 1096
BsuI GTATCC 1 cut(s) 457
BsuRI GGCC 3 cut(s) 784, 1730, 2222
BtgI CCRYGG 2 cut(s) 754, 2369
BtgZI GCGATG 1 cut(s) 210
BtsCI GGATG 8 cut(s) 483, 793, 1029, 1173, 1731, 1813, 1958, 2056
BtsI GCAGTG 1 cut(s) 1844
BtsIMutI CAGTG 5 cut(s) 183, 1122, 1844, 2106, 2164
BveI ACCTGC 2 cut(s) 169, 1461
Cac8I GCNNGC 5 cut(s) 139, 813, 2086, 2305, 2311
CaiI CAGNNNCTG 3 cut(s) 698, 812, 2297
CciI TCATGA 1 cut(s) 2019
CfoI GCGC 3 cut(s) 1174, 1518, 2309
Cfr13I GGNCC 2 cut(s) 2071, 2221
CseI GACGC 2 cut(s) 769, 1898
Csp6I GTAC 4 cut(s) 250, 510, 528, 1057
CviAII CATG 5 cut(s) 873, 1405, 1594, 2020, 2370
CviQI GTAC 4 cut(s) 250, 510, 528, 1057
DinI GGCGCC 1 cut(s) 1173
EaeI YGGCCR 1 cut(s) 1728
Eam1104I CTCTTC 2 cut(s) 900, 1226
EarI CTCTTC 2 cut(s) 900, 1226
Ecl136II GAGCTC 1 cut(s) 328
Eco130I CCWWGG 3 cut(s) 505, 2224, 2369
Eco24I GRGCYC 3 cut(s) 123, 330, 387
Eco31I GGTCTC 2 cut(s) 158, 1595
Eco47I GGWCC 1 cut(s) 2071
Eco47III AGCGCT 1 cut(s) 2308
Eco53kI GAGCTC 1 cut(s) 328
Eco57I CTGAAG 3 cut(s) 572, 1499, 2343
Eco88I CYCGRG 1 cut(s) 1335
EcoICRI GAGCTC 1 cut(s) 328
EcoO109I RGGNCCY 1 cut(s) 2071
EcoRI GAATTC 4 cut(s) 242, 800, 1064, 1139
EcoRII CCWGG 2 cut(s) 1162, 1986
EcoT14I CCWWGG 3 cut(s) 505, 2224, 2369
EcoT38I GRGCYC 3 cut(s) 123, 330, 387
EgeI GGCGCC 1 cut(s) 1173
EheI GGCGCC 1 cut(s) 1173
ErhI CCWWGG 3 cut(s) 505, 2224, 2369
FaeI CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
FalI AAGNNNNNCTT 6 cut(s) 299, 331, 334, 366, 1223, 1255
FaqI GGGAC 2 cut(s) 460, 772
FatI CATG 5 cut(s) 872, 1404, 1593, 2019, 2369
FbaI TGATCA 1 cut(s) 1879
FblI GTMKAC 1 cut(s) 2242
Fnu4HI GCNGC 7 cut(s) 193, 201, 392, 696, 2082, 2274, 2289
FokI GGATG 8 cut(s) 490, 800, 1036, 1180, 1718, 1820, 1965, 2043
FriOI GRGCYC 3 cut(s) 123, 330, 387
Fsp4HI GCNGC 7 cut(s) 193, 201, 392, 696, 2082, 2274, 2289
GlaI GCGC 3 cut(s) 1173, 1517, 2308
GluI GCNGC 7 cut(s) 193, 201, 392, 696, 2082, 2274, 2289
GsaI CCCAGC 1 cut(s) 2183
GsuI CTGGAG 1 cut(s) 2140
HaeII RGCGCY 2 cut(s) 1175, 2310
HaeIII GGCC 3 cut(s) 784, 1730, 2222
HapII CCGG 3 cut(s) 234, 785, 817
HgaI GACGC 2 cut(s) 769, 1898
HhaI GCGC 3 cut(s) 1174, 1518, 2309
Hin1I GRCGYC 1 cut(s) 1172
Hin1II CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
Hin6I GCGC 3 cut(s) 1172, 1516, 2307
HinP1I GCGC 3 cut(s) 1172, 1516, 2307
HindIII AAGCTT 1 cut(s) 22
HinfI GANTC 7 cut(s) 689, 1307, 1342, 1408, 1499, 2163, 2294
HpaII CCGG 3 cut(s) 234, 785, 817
HphI GGTGA 9 cut(s) 248, 419, 844, 962, 1111, 1142, 1274, 1811, 1889
Hpy166II GTNNAC 4 cut(s) 289, 1265, 1771, 2243
Hpy8I GTNNAC 4 cut(s) 289, 1265, 1771, 2243
HpyAV CCTTC 3 cut(s) 63, 547, 920
HpyCH4III ACNGT 5 cut(s) 187, 293, 895, 1269, 1637
HpyCH4IV ACGT 2 cut(s) 681, 1329
HpyCH4V TGCA 7 cut(s) 289, 341, 575, 1649, 1889, 2088, 2303
HpyF10VI GCNNNNNNNGC 9 cut(s) 41, 138, 206, 347, 391, 1655, 2120, 2315, 2324
HpySE526I ACGT 2 cut(s) 681, 1329
Hsp92I GRCGYC 1 cut(s) 1172
Hsp92II CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
HspAI GCGC 3 cut(s) 1172, 1516, 2307
KasI GGCGCC 1 cut(s) 1171
KpnI GGTACC 1 cut(s) 513
Ksp22I TGATCA 1 cut(s) 1879
LmnI GCTCC 2 cut(s) 10, 1663
Lsp1109I GCAGC 5 cut(s) 179, 378, 682, 2068, 2285
LweI GCATC 8 cut(s) 187, 337, 391, 432, 1014, 2101, 2290, 2351
MaeII ACGT 2 cut(s) 681, 1329
MaeIII GTNAC 2 cut(s) 181, 376
MflI RGATCY 3 cut(s) 565, 819, 1096
MhlI GDGCHC 7 cut(s) 111, 123, 291, 330, 387, 1660, 2108
MlsI TGGCCA 1 cut(s) 1730
MluNI TGGCCA 1 cut(s) 1730
Mly113I GGCGCC 1 cut(s) 1172
MlyI GAGTC 1 cut(s) 1493
Mox20I TGGCCA 1 cut(s) 1730
MroXI GAANNNNTTC 2 cut(s) 1269, 1397
MscI TGGCCA 1 cut(s) 1730
MseI TTAA 6 cut(s) 59, 779, 1083, 1326, 2046, 2067
Msp20I TGGCCA 1 cut(s) 1730
MspA1I CMGCKG 2 cut(s) 695, 2183
MspI CCGG 3 cut(s) 234, 785, 817
MspR9I CCNGG 4 cut(s) 234, 817, 1164, 1988
Mva1269I GAATGC 1 cut(s) 1615
MvaI CCWGG 2 cut(s) 1164, 1988
MwoI GCNNNNNNNGC 9 cut(s) 41, 138, 206, 347, 391, 1655, 2120, 2315, 2324
NarI GGCGCC 1 cut(s) 1172
NciI CCSGG 2 cut(s) 234, 817
NcoI CCATGG 1 cut(s) 2369
NlaIII CATG 5 cut(s) 876, 1408, 1597, 2023, 2373
NlaIV GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
NmeAIII GCCGAG 2 cut(s) 235, 283
NmuCI GTSAC 2 cut(s) 181, 376
NspI RCATGY 1 cut(s) 1597
PagI TCATGA 1 cut(s) 2019
PctI GAATGC 1 cut(s) 1615
PdmI GAANNNNTTC 2 cut(s) 1269, 1397
PfeI GAWTC 6 cut(s) 689, 1307, 1342, 1408, 2163, 2294
PflMI CCANNNNNTGG 2 cut(s) 443, 829
PkrI GCNGC 7 cut(s) 194, 202, 393, 697, 2083, 2275, 2290
PleI GAGTC 1 cut(s) 1493
PluTI GGCGCC 1 cut(s) 1175
PpsI GAGTC 1 cut(s) 1493
PpuMI RGGWCCY 1 cut(s) 2071
Psp124BI GAGCTC 1 cut(s) 330
Psp1406I AACGTT 1 cut(s) 1329
Psp5II RGGWCCY 1 cut(s) 2071
Psp6I CCWGG 2 cut(s) 1162, 1986
PspFI CCCAGC 1 cut(s) 2179
PspGI CCWGG 2 cut(s) 1162, 1986
PspN4I GGNNCC 5 cut(s) 6, 511, 821, 1098, 1173
PspPI GGNCC 2 cut(s) 2071, 2221
PspPPI RGGWCCY 1 cut(s) 2071
PstNI CAGNNNCTG 3 cut(s) 698, 812, 2297
PsuI RGATCY 3 cut(s) 565, 819, 1096
PvuII CAGCTG 2 cut(s) 695, 2183
RsaI GTAC 4 cut(s) 251, 511, 529, 1058
RsaNI GTAC 4 cut(s) 250, 510, 528, 1057
SacI GAGCTC 1 cut(s) 330
SaqAI TTAA 6 cut(s) 59, 779, 1083, 1326, 2046, 2067
SatI GCNGC 7 cut(s) 193, 201, 392, 696, 2082, 2274, 2289
Sau96I GGNCC 2 cut(s) 2071, 2221
SchI GAGTC 1 cut(s) 1493
ScrFI CCNGG 4 cut(s) 234, 817, 1164, 1988
SduI GDGCHC 7 cut(s) 111, 123, 291, 330, 387, 1660, 2108
SfaNI GCATC 8 cut(s) 187, 337, 391, 432, 1014, 2101, 2290, 2351
SfcI CTRYAG 2 cut(s) 413, 2124
SfoI GGCGCC 1 cut(s) 1173
SinI GGWCC 1 cut(s) 2071
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
SsiI CCGC 6 cut(s) 141, 200, 203, 1027, 1534, 2289
SspDI GGCGCC 1 cut(s) 1171
SstI GAGCTC 1 cut(s) 330
StyD4I CCNGG 4 cut(s) 232, 815, 1162, 1986
StyI CCWWGG 3 cut(s) 505, 2224, 2369
TaaI ACNGT 5 cut(s) 187, 293, 895, 1269, 1637
TaiI ACGT 2 cut(s) 684, 1332
TaqI TCGA 3 cut(s) 1357, 1401, 1904
TatI WGTACW 1 cut(s) 1056
TauI GCSGC 2 cut(s) 203, 2291
TfiI GAWTC 6 cut(s) 689, 1307, 1342, 1408, 2163, 2294
Tru1I TTAA 6 cut(s) 59, 779, 1083, 1326, 2046, 2067
Tru9I TTAA 6 cut(s) 59, 779, 1083, 1326, 2046, 2067
TscAI CASTG 5 cut(s) 190, 1129, 1851, 2113, 2164
TseFI GTSAC 2 cut(s) 181, 376
TseI GCWGC 5 cut(s) 192, 391, 695, 2081, 2273
Tsp45I GTSAC 2 cut(s) 181, 376
TspDTI ATGAA 8 cut(s) 813, 1020, 1077, 1193, 1593, 1737, 1994, 2008
TspGWI ACGGA 1 cut(s) 476
TspRI CASTG 5 cut(s) 190, 1129, 1851, 2113, 2164
Van91I CCANNNNNTGG 2 cut(s) 443, 829
VneI GTGCAC 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 2071
XapI RAATTY 5 cut(s) 242, 536, 800, 1064, 1139
XceI RCATGY 1 cut(s) 1597
XcmI CCANNNNNNNNNTGG 1 cut(s) 1621
XmiI GTMKAC 1 cut(s) 2242
XmnI GAANNNNTTC 2 cut(s) 1269, 1397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.