Prupe.1G295600_v2.0.a1

Heat shock protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001272
Physical Location & Seq
Forward (+)
29232457 .. 29238735
6279 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G295600.1

Sequence Viewer

Length: 2394 bp
ATGGCTCCAGTTCTAAGCAGAAGCTTAGCAACTGCTTCTCTAGCTTCACTTCCTTCCTCATCTCCCTTCACACTTAGAAACCCCAGCAAGGCCTTGAGCCTGAGAAGTGCTTTTGTTCCTCAAAATGGGCTCAGGAAGGGCTTCTCTTGCGGTGGATTGAAGTGGAAGCTTGAGAGCAAAAACAGAGGAATATCTATTCGATGTGATGCGGCGGTTGCCGAGAAAGAAGCCACCGATACGCCCGGTGAAAAATTCGAGTACCAAGCCGAGGTCACTCGCCTAATGGATTTGATAGTTCATAGTCTATACAGCCACAAGGAGGTGTTTCTGAGGGAGCTTGTGAGTAATGCAAGTGATGCTTTGGACAAGTTGAGATTTTTGAGTGTGACTGAGCCCTCTCTGCTTGGAGATGCTGGTGAGCTACAGATACGCATCAAACCTGATCCAGATAATGGGACTATCACTATAACGGATACTGGTATTGGAATGACGAAAGAGGAACTCATTGACTGCCTTGGAACCATTGCTCAGAGTGGTACTTCAAAGTTCTTAAAGGCTCTGAAGGAAAATAAGGATCTTGGTGCAGACAATGGCTTAATTGGTCAATTTGGTGTTGGGTTCTATTCTGCTTTTCTGGTCGCTGAGAAGGTTGTTGTCTCTACAAAAAGCCCAAGGTCAGACAAGCAATATGTTTGGGAAGCAGCGGCTGACAGTAGCTCTTATGTAATTAGGGAAGAAACTGATCCTGAAAATCTCATACGCCGTGGAACACAGATCACACTCTATTTAAGGCCGGATGACAAGTATGAGTTTTCAGAGCCAGCCCGGATCCAGGGTTTGGTGAAGAATTACTCGCAGTTTGTTTCCTTCCCCATCTATACATGGCAAGAAAAATCGAGGACTGTTGAGGTGGAAGAGGAGGAAGAACCAAAAGAAGGAGAAGAACCAAAGCCAGAGGGTGAGAAGAAAAAGAAGACAAAAACTGAGAAGTATTGGGATTGGGAATTAGCAAATGAAACGAAGCCTATATGGATGCGGAATCCAAAGGAAGTTGAAAAAGACGAGTACCATGAATTTTACAAAAAAACTTTTAGTGAGTTCTTGGATCCAGTTGCATACACTCACTTCACCACTGAGGGTGAGGTGGAGTTCAGGAGTGTTCTTTATATTCCTGGAATGGGGCCTCTTAACAATGAGGATGTAGTGAACGCAAAAACAAAGAATATACGTTTGTATGTGAAACGGATATTTATCTCAGATGATTTTGATGGTGAACTGTTTCCTCGATACCTGAGCTTTGTTAAGGGTGTGGTGGATTCAAATGATCTTCCTCTTAACGTTTCTCGAGAGATTCTTCAAGAAAGTCGAATTGTAAGAATTATGAGAAAGAGACTTGTACGGAAAACATTTGACATGATTCAAGAGATTTCTGAGAGTGAAAATAAAGAGGATTACAAGAAATTATGGGAGAACTTTGGCAGGTTTCTAAAATTGGGATGCATCGAGGACTCTGGAAATCACAAGCGCCTAACACCCTTGTTGCGGTTCTACTCTTCAAAAAGTGAGGAAGAACTGATAAGCTTAGATGATTATGTCGAGAACATGCCTGAGAACCAGAAGGCAATCTATTACTTGGCAGCAGACAGTCTGAAAAGTGCGAAAAGTGCTCCATTCTTGGAAAAGTTGGTTCAGAAAGATATTGAGGTTTTGTATTTAGTAGAACCTATTGATGAAGTGGCCATCCAGAACCTACAGACATACAAAGAAAAGAAGTTTGTAGACATTAGCAAGGAAGATTTAGAGCTTGGTGATGAGGATGAGGTCAAAGAAAGGGAAACTGAACAAGAATACAATCTTCTCTGTGACTGGATAAAGCAACAACTTGGTGATAAGGTGGCAAAAGTCCAAGTCTCAAAGCGTCTAAGCTCATCTCCCTGTGTACTTGTTTCTGGCAAGTTTGGATGGTCTGCCAATATGGAAAGATTGATGAAAGCACAGGCACTTGGTGATACTGCAAGTTTGGAGTTCATGAGGGGCAGGAGAATATTGGAAGTTAATCCAGATCATCCCATCGTTAAAGATCTAAAGGCTGCTTGCAAGAACGCCCCTGACAGCACAGATGCCAAGAGAGCTGTAGACCTATTGTATGACACAGCATTGATCTCCAGTGGATTCACACCTGACAGCCCAGCTGAGTTGGGAAACAAGATATACGAGATGATGGCAATGGCCCTTGGAGGAAGATGGGGTAGATCGGAAGACGAGGAGGCAGAGACGGAGGTAGCTGACGGTGATGCAGGAGAATCATCTGATGCGAGTGCTGGTGAAGTGGTGGAAGCACAAGTGATTGAACCATCAGACGTGAGGGCAGAGAGCGATCCATGGAGCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0006970 GO:0007275 GO:0008104 GO:0008144 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009791 GO:0009941 GO:0010035 GO:0010157 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0017076 GO:0030554 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0046983 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418
Pfam Domains
Protein Families
HATPase_c HSP90

Protein Analysis

798

Amino Acids

90.08

Weight (kDa)

4.94

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1470
AccB7I CCANNNNNTGG 2 cut(s) 452, 838
AccI GTMKAC 2 cut(s) 1779, 2136
AciI CCGC 6 cut(s) 150, 209, 212, 704, 1036, 1543
AclI AACGTT 1 cut(s) 1338
AclWI GGATC 8 cut(s) 437, 582, 737, 823, 836, 1100, 1113, 2372
AcoI YGGCCR 1 cut(s) 1737
AcsI RAATTY 2 cut(s) 251, 1073
AcuI CTGAAG 1 cut(s) 581
AdeI CACNNNGTG 1 cut(s) 2006
AfaI GTAC 5 cut(s) 260, 538, 1067, 1398, 1941
AgsI TTSAA 8 cut(s) 160, 543, 1055, 1320, 1358, 1421, 1557, 2351
AjiI CACGTC 1 cut(s) 2362
AjnI CCWGG 2 cut(s) 831, 1171
Alw21I GWGCWC 1 cut(s) 1669
Alw26I GTCTC 4 cut(s) 661, 1384, 1915, 2267
AlwI GGATC 8 cut(s) 437, 582, 737, 823, 836, 1100, 1113, 2372
AlwNI CAGNNNCTG 1 cut(s) 707
Ama87I CYCGRG 1 cut(s) 1344
AoxI GGCC 5 cut(s) 90, 791, 1181, 1737, 2229
ApeKI GCWGC 3 cut(s) 701, 1637, 2090
ApoI RAATTY 2 cut(s) 251, 1073
Asp700I GAANNNNTTC 2 cut(s) 140, 1278
AspLEI GCGC 1 cut(s) 1527
AspS9I GGNCC 2 cut(s) 1181, 2230
AsuC2I CCSGG 2 cut(s) 243, 826
AvaI CYCGRG 1 cut(s) 1344
BalI TGGCCA 1 cut(s) 1739
BamHI GGATCC 2 cut(s) 828, 1105
BanII GRGCYC 2 cut(s) 132, 396
BbsI GAAGAC 2 cut(s) 980, 2265
Bbv12I GWGCWC 1 cut(s) 1669
BbvI GCAGC 3 cut(s) 713, 1649, 2077
BccI CCATC 8 cut(s) 881, 1262, 1748, 1956, 2078, 2215, 2238, 2362
BceAI ACGGC 1 cut(s) 747
BciT130I CCWGG 2 cut(s) 833, 1173
BciVI GTATCC 1 cut(s) 466
BcnI CCSGG 2 cut(s) 243, 826
BcoDI GTCTC 4 cut(s) 661, 1384, 1915, 2267
BfaI CTAG 1 cut(s) 41
BfmI CTRYAG 3 cut(s) 422, 1751, 2133
BfoI RGCGCY 1 cut(s) 1528
BfuAI ACCTGC 1 cut(s) 1470
BfuI GTATCC 1 cut(s) 466
BglII AGATCT 1 cut(s) 2080
BisI GCNGC 5 cut(s) 210, 702, 705, 1638, 2091
BlpI GCTNAGC 1 cut(s) 25
BlsI GCNGC 5 cut(s) 211, 703, 706, 1639, 2092
Bme1390I CCNGG 4 cut(s) 243, 826, 833, 1173
BmeT110I CYCGRG 1 cut(s) 1344
BmgBI CACGTC 1 cut(s) 2362
BmgT120I GGNCC 2 cut(s) 1181, 2230
BmiI GGNNCC 5 cut(s) 6, 520, 830, 1107, 1182
BmrFI CCNGG 4 cut(s) 243, 826, 833, 1173
BpiI GAAGAC 2 cut(s) 980, 2265
BpmI CTGGAG 1 cut(s) 2149
Bpu10I CCTNAGC 2 cut(s) 131, 1292
Bpu1102I GCTNAGC 1 cut(s) 25
BpuEI CTTGAG 2 cut(s) 115, 191
BpuMI CCSGG 2 cut(s) 243, 826
BsaBI GATNNNNATC 2 cut(s) 431, 1250
BsaJI CCNNGG 7 cut(s) 267, 514, 671, 763, 832, 2233, 2381
Bse1I ACTGG 5 cut(s) 8, 481, 1109, 1871, 2166
Bse3DI GCAATG 2 cut(s) 522, 2232
Bse8I GATNNNNATC 2 cut(s) 431, 1250
BseBI CCWGG 2 cut(s) 833, 1173
BseDI CCNNGG 7 cut(s) 267, 514, 671, 763, 832, 2233, 2381
BseGI GGATG 8 cut(s) 802, 1038, 1204, 1502, 1740, 1822, 1967, 2065
BseJI GATNNNNATC 2 cut(s) 431, 1250
BseMI GCAATG 2 cut(s) 522, 2232
BseNI ACTGG 5 cut(s) 8, 481, 1109, 1871, 2166
BseRI GAGGAG 2 cut(s) 932, 2279
BseXI GCAGC 3 cut(s) 713, 1649, 2077
BseYI CCCAGC 2 cut(s) 83, 2188
BsgI GTGCAG 1 cut(s) 603
BshFI GGCC 5 cut(s) 92, 793, 1183, 1739, 2231
BsiHKAI GWGCWC 1 cut(s) 1669
BsiHKCI CYCGRG 1 cut(s) 1344
BsiSI CCGG 3 cut(s) 243, 794, 826
BslFI GGGAC 1 cut(s) 469
BsmAI GTCTC 4 cut(s) 661, 1384, 1915, 2267
BsmBI CGTCTC 1 cut(s) 2267
BsmFI GGGAC 1 cut(s) 469
BsnI GGCC 5 cut(s) 92, 793, 1183, 1739, 2231
BsoBI CYCGRG 1 cut(s) 1344
Bsp1286I GDGCHC 3 cut(s) 132, 396, 1669
Bsp1720I GCTNAGC 1 cut(s) 25
Bsp19I CCATGG 1 cut(s) 2381
BspACI CCGC 6 cut(s) 150, 209, 212, 704, 1036, 1543
BspANI GGCC 5 cut(s) 92, 793, 1183, 1739, 2231
BspHI TCATGA 1 cut(s) 2028
BspLI GGNNCC 5 cut(s) 6, 520, 830, 1107, 1182
BspMI ACCTGC 1 cut(s) 1470
BspPI GGATC 8 cut(s) 437, 582, 737, 823, 836, 1100, 1113, 2372
BsrDI GCAATG 2 cut(s) 522, 2232
BsrI ACTGG 5 cut(s) 8, 481, 1109, 1871, 2166
BssECI CCNNGG 7 cut(s) 267, 514, 671, 763, 832, 2233, 2381
BssT1I CCWWGG 4 cut(s) 514, 671, 2233, 2381
Bst2UI CCWGG 2 cut(s) 833, 1173
Bst4CI ACNGT 5 cut(s) 713, 904, 1278, 1646, 2291
Bst6I CTCTTC 2 cut(s) 909, 1558
BstAPI GCANNNNNTGC 1 cut(s) 356
BstC8I GCNNGC 2 cut(s) 822, 2095
BstDSI CCRYGG 2 cut(s) 763, 2381
BstF5I GGATG 8 cut(s) 802, 1038, 1204, 1502, 1740, 1822, 1967, 2065
BstH2I RGCGCY 1 cut(s) 1528
BstHHI GCGC 1 cut(s) 1527
BstMAI GTCTC 4 cut(s) 661, 1384, 1915, 2267
BstMWI GCNNNNNNNGC 7 cut(s) 41, 147, 215, 356, 400, 1664, 2129
BstNI CCWGG 2 cut(s) 833, 1173
BstNSI RCATGY 1 cut(s) 1606
BstSCI CCNGG 4 cut(s) 241, 824, 831, 1171
BstSFI CTRYAG 3 cut(s) 422, 1751, 2133
BstV1I GCAGC 3 cut(s) 713, 1649, 2077
BstV2I GAAGAC 2 cut(s) 980, 2265
BstX2I RGATCY 4 cut(s) 574, 828, 1105, 2080
BstYI RGATCY 4 cut(s) 574, 828, 1105, 2080
BsuI GTATCC 1 cut(s) 466
BsuRI GGCC 5 cut(s) 92, 793, 1183, 1739, 2231
BtgI CCRYGG 2 cut(s) 763, 2381
BtrI CACGTC 1 cut(s) 2362
BtsCI GGATG 8 cut(s) 802, 1038, 1204, 1502, 1740, 1822, 1967, 2065
BtsIMutI CAGTG 2 cut(s) 1131, 2173
BveI ACCTGC 1 cut(s) 1470
Cac8I GCNNGC 2 cut(s) 822, 2095
CaiI CAGNNNCTG 1 cut(s) 707
CciI TCATGA 1 cut(s) 2028
CfoI GCGC 1 cut(s) 1527
Cfr13I GGNCC 2 cut(s) 1181, 2230
CseI GACGC 1 cut(s) 1907
Csp6I GTAC 5 cut(s) 259, 537, 1066, 1397, 1940
CviAII CATG 6 cut(s) 882, 1070, 1414, 1603, 2029, 2382
CviQI GTAC 5 cut(s) 259, 537, 1066, 1397, 1940
DraIII CACNNNGTG 1 cut(s) 2006
EaeI YGGCCR 1 cut(s) 1737
Eam1104I CTCTTC 2 cut(s) 909, 1558
EarI CTCTTC 2 cut(s) 909, 1558
Eco130I CCWWGG 4 cut(s) 514, 671, 2233, 2381
Eco147I AGGCCT 1 cut(s) 92
Eco24I GRGCYC 2 cut(s) 132, 396
Eco57I CTGAAG 1 cut(s) 581
Eco88I CYCGRG 1 cut(s) 1344
EcoO109I RGGNCCY 1 cut(s) 1181
EcoRII CCWGG 2 cut(s) 831, 1171
EcoT14I CCWWGG 4 cut(s) 514, 671, 2233, 2381
EcoT22I ATGCAT 1 cut(s) 1502
EcoT38I GRGCYC 2 cut(s) 132, 396
ErhI CCWWGG 4 cut(s) 514, 671, 2233, 2381
Esp3I CGTCTC 1 cut(s) 2267
FaeI CATG 6 cut(s) 885, 1073, 1417, 1606, 2032, 2385
FalI AAGNNNNNCTT 2 cut(s) 343, 375
FaqI GGGAC 1 cut(s) 469
FatI CATG 6 cut(s) 881, 1069, 1413, 1602, 2028, 2381
FblI GTMKAC 2 cut(s) 1779, 2136
Fnu4HI GCNGC 5 cut(s) 210, 702, 705, 1638, 2091
FokI GGATG 8 cut(s) 809, 1045, 1211, 1509, 1727, 1829, 1974, 2052
FriOI GRGCYC 2 cut(s) 132, 396
Fsp4HI GCNGC 5 cut(s) 210, 702, 705, 1638, 2091
FspBI CTAG 1 cut(s) 41
GlaI GCGC 1 cut(s) 1526
GluI GCNGC 5 cut(s) 210, 702, 705, 1638, 2091
GsaI CCCAGC 2 cut(s) 87, 2192
GsuI CTGGAG 1 cut(s) 2149
HaeII RGCGCY 1 cut(s) 1528
HaeIII GGCC 5 cut(s) 92, 793, 1183, 1739, 2231
HapII CCGG 3 cut(s) 243, 794, 826
HgaI GACGC 1 cut(s) 1907
HhaI GCGC 1 cut(s) 1527
Hin1II CATG 6 cut(s) 885, 1073, 1417, 1606, 2032, 2385
Hin6I GCGC 1 cut(s) 1525
HinP1I GCGC 1 cut(s) 1525
HindIII AAGCTT 3 cut(s) 22, 167, 1579
HinfI GANTC 7 cut(s) 1039, 1316, 1351, 1417, 1508, 2172, 2303
HpaII CCGG 3 cut(s) 243, 794, 826
Hpy166II GTNNAC 5 cut(s) 1207, 1274, 1780, 1940, 2137
Hpy8I GTNNAC 5 cut(s) 1207, 1274, 1780, 1940, 2137
HpyAV CCTTC 8 cut(s) 63, 76, 130, 556, 640, 877, 929, 1612
HpyCH4III ACNGT 5 cut(s) 713, 904, 1278, 1646, 2291
HpyCH4IV ACGT 3 cut(s) 1228, 1338, 2361
HpyCH4V TGCA 7 cut(s) 350, 584, 1115, 1500, 2015, 2097, 2297
HpyF10VI GCNNNNNNNGC 7 cut(s) 41, 147, 215, 356, 400, 1664, 2129
HpySE526I ACGT 3 cut(s) 1228, 1338, 2361
Hsp92II CATG 6 cut(s) 885, 1073, 1417, 1606, 2032, 2385
HspAI GCGC 1 cut(s) 1525
LmnI GCTCC 4 cut(s) 10, 334, 1672, 2385
Lsp1109I GCAGC 3 cut(s) 713, 1649, 2077
MaeI CTAG 1 cut(s) 41
MaeII ACGT 3 cut(s) 1228, 1338, 2361
MaeIII GTNAC 3 cut(s) 271, 385, 1862
MflI RGATCY 4 cut(s) 574, 828, 1105, 2080
MhlI GDGCHC 3 cut(s) 132, 396, 1669
MlsI TGGCCA 1 cut(s) 1739
MluNI TGGCCA 1 cut(s) 1739
MlyI GAGTC 1 cut(s) 1502
Mox20I TGGCCA 1 cut(s) 1739
Mph1103I ATGCAT 1 cut(s) 1502
MroXI GAANNNNTTC 2 cut(s) 140, 1278
MscI TGGCCA 1 cut(s) 1739
MseI TTAA 8 cut(s) 551, 596, 788, 1188, 1302, 1335, 2055, 2076
Msp20I TGGCCA 1 cut(s) 1739
MspA1I CMGCKG 2 cut(s) 704, 2192
MspI CCGG 3 cut(s) 243, 794, 826
MspR9I CCNGG 4 cut(s) 243, 826, 833, 1173
MvaI CCWGG 2 cut(s) 833, 1173
MwoI GCNNNNNNNGC 7 cut(s) 41, 147, 215, 356, 400, 1664, 2129
NciI CCSGG 2 cut(s) 243, 826
NcoI CCATGG 1 cut(s) 2381
NlaIII CATG 6 cut(s) 885, 1073, 1417, 1606, 2032, 2385
NlaIV GGNNCC 5 cut(s) 6, 520, 830, 1107, 1182
NmeAIII GCCGAG 2 cut(s) 244, 292
NmuCI GTSAC 3 cut(s) 271, 385, 1862
NsiI ATGCAT 1 cut(s) 1502
NspI RCATGY 1 cut(s) 1606
PaeR7I CTCGAG 1 cut(s) 1344
PagI TCATGA 1 cut(s) 2028
PceI AGGCCT 1 cut(s) 92
PdmI GAANNNNTTC 2 cut(s) 140, 1278
PfeI GAWTC 6 cut(s) 1039, 1316, 1351, 1417, 2172, 2303
PflMI CCANNNNNTGG 2 cut(s) 452, 838
PfoI TCCNGGA 1 cut(s) 1171
PkrI GCNGC 5 cut(s) 211, 703, 706, 1639, 2092
PleI GAGTC 1 cut(s) 1502
PpsI GAGTC 1 cut(s) 1502
Psp1406I AACGTT 1 cut(s) 1338
Psp6I CCWGG 2 cut(s) 831, 1171
PspFI CCCAGC 2 cut(s) 83, 2188
PspGI CCWGG 2 cut(s) 831, 1171
PspN4I GGNNCC 5 cut(s) 6, 520, 830, 1107, 1182
PspPI GGNCC 2 cut(s) 1181, 2230
PstNI CAGNNNCTG 1 cut(s) 707
PsuI RGATCY 4 cut(s) 574, 828, 1105, 2080
PvuII CAGCTG 1 cut(s) 2192
RsaI GTAC 5 cut(s) 260, 538, 1067, 1398, 1941
RsaNI GTAC 5 cut(s) 259, 537, 1066, 1397, 1940
SaqAI TTAA 8 cut(s) 551, 596, 788, 1188, 1302, 1335, 2055, 2076
SatI GCNGC 5 cut(s) 210, 702, 705, 1638, 2091
Sau96I GGNCC 2 cut(s) 1181, 2230
SchI GAGTC 1 cut(s) 1502
ScrFI CCNGG 4 cut(s) 243, 826, 833, 1173
SduI GDGCHC 3 cut(s) 132, 396, 1669
SfcI CTRYAG 3 cut(s) 422, 1751, 2133
Sfr274I CTCGAG 1 cut(s) 1344
SlaI CTCGAG 1 cut(s) 1344
SmlI CTYRAG 3 cut(s) 94, 170, 1344
SmoI CTYRAG 3 cut(s) 94, 170, 1344
SseBI AGGCCT 1 cut(s) 92
SsiI CCGC 6 cut(s) 150, 209, 212, 704, 1036, 1543
SspI AATATT 1 cut(s) 2046
SspMI CTAG 1 cut(s) 41
StuI AGGCCT 1 cut(s) 92
StyD4I CCNGG 4 cut(s) 241, 824, 831, 1171
StyI CCWWGG 4 cut(s) 514, 671, 2233, 2381
TaaI ACNGT 5 cut(s) 713, 904, 1278, 1646, 2291
TaiI ACGT 3 cut(s) 1231, 1341, 2364
TaqI TCGA 8 cut(s) 199, 255, 896, 1285, 1345, 1366, 1503, 1596
TatI WGTACW 1 cut(s) 1939
TauI GCSGC 2 cut(s) 212, 707
TfiI GAWTC 6 cut(s) 1039, 1316, 1351, 1417, 2172, 2303
Tru1I TTAA 8 cut(s) 551, 596, 788, 1188, 1302, 1335, 2055, 2076
Tru9I TTAA 8 cut(s) 551, 596, 788, 1188, 1302, 1335, 2055, 2076
TscAI CASTG 2 cut(s) 1138, 2173
TseFI GTSAC 3 cut(s) 271, 385, 1862
TseI GCWGC 3 cut(s) 701, 1637, 2090
Tsp45I GTSAC 3 cut(s) 271, 385, 1862
TspDTI ATGAA 6 cut(s) 287, 1029, 1086, 1746, 2003, 2017
TspGWI ACGGA 4 cut(s) 485, 1258, 1414, 2291
TspRI CASTG 2 cut(s) 1138, 2173
Van91I CCANNNNNTGG 2 cut(s) 452, 838
XapI RAATTY 2 cut(s) 251, 1073
XceI RCATGY 1 cut(s) 1606
XhoI CTCGAG 1 cut(s) 1344
XmiI GTMKAC 2 cut(s) 1779, 2136
XmnI GAANNNNTTC 2 cut(s) 140, 1278
XspI CTAG 1 cut(s) 41
Zsp2I ATGCAT 1 cut(s) 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.