Rw4G030910

Heat shock protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0001272
Physical Location & Seq
Reverse (-)
57712687 .. 57717908
5222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G030910.1

Sequence Viewer

Length: 2379 bp
ATGGCTCCAGTCCTGAGCAGAAGCTTATCCACAGCCTCTCTTGCTTCACTTCCTTCCTTAACACTCAGAAACCCCAACAAGGTCTTGAACCTCAGAAGTGCCTTTGTGCCCCAAAATGGGCTCAGAAAGGGCTTTGCTTGCGGTGGTTTGAAGTGGAGGCTTGAGACCCAAAATAGGCAGGTCACTGTTCGCTGCGATGCCGCGGTCGCCGAGAAAGAGGTCGCCGATACGCCCGGTGAGGAATTCCAGTACCAAGCCGAGGTCAGTCGGCTAATGGATTTGATAGTGCACAGTCTATATAGCCACAAGGAGGTCTTCCTTAGAGAGCTTGTTAGTAATGCAAGTGATGCTTTGGACAAGTTGAGATTTTTGAGTGTGACTGAGCCCTCGCTGCTTGGAGATGCTGGTGAGCTACAGATACGCATAAAACCCGACCCAGAGAATGGGACTGTCACTATAACGGATACTGGTATTGGGATGACGAAAGAGGAACTCATTGACTGCCTTGGTACCATTGCTCAGAGTGGTACTTCAAAATTCTTGACTGCTCTGAAGGAAAATAAGGATCTTGGTGCAGACAATGGTTTGATTGGTCAATTTGGTGTTGGGTTCTATTCTGCTTTTCTTGTTGCTGACAAGGTTTGTTTCTACAAAAAGCCCAAATCAGACAAGCAATACGTCTGGGAATCAGCTGCTGAGAGTAGCTCTTATGTGATTAGGGAAGAAACTGATCCAGAAAATATCATTAGCCGTGGGACGCAGATCAAACTATATTTAAGGCCGGATGACAAGTATGAATTCTCAGAGCCTGCCCGGATCCAGAGTTTGGTGAAGAATTACTCGCAATTTGTTTCTTTCCCCATCTACACATGGCAAGAAAAGTCAAGGACTGTTGAGGTTGAAGAGGAGGAAGAACCAAAGGAAGGAGAAGAACCAAAGCCAGAGGGTGAGAAGAAAAAGAAGACTATAACTGAGAAGTATTGGGATTGGGAATTAGCCAATGAAACAAAGCCTATATGGATGCGGAGTTCAAAGGAAGTAGAAAAAGATGAGTACAATGAATTCTACAAGAAAACATTTAACGAGTTCTTGGATCCACTTGCTTACACTCACTTCACCACTGAGGGTGAGGTGGAATTCAGGAGTGTTCTTTATATTCCTGGGATGGCGCCAATGAACAATGAGGATATAGCAAATCCAAAAACAAAGAACATTCGGTTATATGTGAAGAGGGTCTTTATCTCAGATGATTTTGATGGTGAACTGTTTCCAAGATACCTGAGCTTTGTAAAGGGTGTGGTGGATTCAAATGATCTTCCTCTTAATGTTTCCCGAGAGATTCTTCAAGAAAGTCGAATTGTAAGAATTATGAGAAAGAGACTTGTAAGGAAAACATTCGACATGATTCAAGAACTCTCCGAAAGTGAAAATAAAGAGGATTACAAGAAGTTATGGGAGAACTTCGGCAGGTTTCTGAAGTTGGGTTGTATTGAGGACTCTGGAAATCACAAGCGCATAACACCTCTGTTGCGGTTTTACACTTCAAAAAGTGAGGAAGAACTGACGAGTTTAGATGAATATGTTGAAAACATGCCTGAGACCCAGAATGCCATCTATTACTTGGCAACAGACAGTCTGAAAAGTGCAAGAAGTGCTCCATTCTTGGAAAAGTTGGTTCAGAAAGATATTGAGGTTTTGTATTTAGTTGAACCTATTGATGAAGTGGCGATCCAAAACCTACAAACCTACAAAGAGAAGAAGTTTGTGGACATTAGCAAGGAAGATTTGGAACTTGGTGATGAGGATGAGGTCAAGGACAGGGAGACTAAACAAGAATACACACTGCTCTGTGATTGGATAAAGCAACAACTTGGTGATCAGGTTGCAAAAGTCCAAGTATCGAAGCGTCTAAGCTCATCTCCTTGTGTTCTTGTTTCGGGCAAGTTTGGATGGTCTGCTAATATGGAAAGATTGATGAAAGCCCAGGCACTTGGAGATACTTCAAGTTTGGAGTTCATGAGGGGCAGGAGAATAATGGAAATTAACCCAGATCATCCTATCATTAAGGACCTAAATGCTGCTTGCAAGAACGCCCCTGAGAGCACTGATGCCAAGAGAGCTGTAGCCCTCTTGTTTGACACAGCATTGATCTCCAGTGGATTCACTCCCGACAGCCCAGCTGAGTTGGGAAACAAGATATATGAGATGATGGCAATGGCCCTTGGAGGAAGATGGGGTAGACTGGAAGATGAGGAGGCAGAGGGAAAGGCAGCAAATGACAATGCCGCAGAATCTGATGCTAGCGTTGGTGAAGCCTCTGAAGCAGAAGTAGTTGAAGCATCAGAAGTGAGGGCGGAGAGCGATCCATGGAGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0006970 GO:0007275 GO:0008104 GO:0008144 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009791 GO:0009941 GO:0010035 GO:0010157 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0017076 GO:0030554 GO:0031090 GO:0031967 GO:0031974 GO:0031975 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0046983 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418
Pfam Domains
Protein Families
HATPase_c HSP90

Protein Analysis

792

Amino Acids

89.89

Weight (kDa)

4.91

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c PF02518 105 - 207 1.9e-06 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3 PF13589 107 - 220 7e-07 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90 PF00183 266 - 765 7.8e-196 Hsp90 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 169, 1458
Acc65I GGTACC 1 cut(s) 509
AccB1I GGYRCC 2 cut(s) 509, 1168
AccB7I CCANNNNNTGG 2 cut(s) 443, 826
AccI GTMKAC 1 cut(s) 2239
AccII CGCG 1 cut(s) 203
AciI CCGC 7 cut(s) 141, 201, 203, 1024, 1531, 2286, 2354
AclWI GGATC 8 cut(s) 573, 725, 811, 824, 1088, 1101, 1723, 2357
AcsI RAATTY 5 cut(s) 242, 536, 797, 1061, 1136
AcuI CTGAAG 3 cut(s) 572, 1496, 2340
AcyI GRCGYC 1 cut(s) 1169
AfaI GTAC 4 cut(s) 251, 511, 529, 1055
AfiI CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 826, 923
AjnI CCWGG 2 cut(s) 1159, 1983
AloI GAACNNNNNNTCC 2 cut(s) 1012, 1044
AluBI AGCT 9 cut(s) 24, 328, 412, 692, 705, 1284, 1914, 2120, 2180
AluI AGCT 9 cut(s) 24, 328, 412, 692, 705, 1284, 1914, 2120, 2180
Alw21I GWGCWC 3 cut(s) 291, 1657, 2105
Alw26I GTCTC 4 cut(s) 158, 1372, 1592, 1817
Alw44I GTGCAC 1 cut(s) 287
AlwI GGATC 8 cut(s) 573, 725, 811, 824, 1088, 1101, 1723, 2357
AlwNI CAGNNNCTG 3 cut(s) 695, 809, 2294
Ama87I CYCGRG 1 cut(s) 1332
AoxI GGCC 2 cut(s) 779, 2217
ApaLI GTGCAC 1 cut(s) 287
ApeKI GCWGC 5 cut(s) 192, 391, 692, 2078, 2270
ApoI RAATTY 5 cut(s) 242, 536, 797, 1061, 1136
Asp700I GAANNNNTTC 2 cut(s) 1266, 1394
Asp718I GGTACC 1 cut(s) 509
AspLEI GCGC 2 cut(s) 1171, 1515
AspS9I GGNCC 2 cut(s) 2068, 2218
AsuC2I CCSGG 2 cut(s) 234, 814
AsuNHI GCTAGC 1 cut(s) 2300
AvaI CYCGRG 1 cut(s) 1332
AvaII GGWCC 1 cut(s) 2068
BaeGI GKGCMC 2 cut(s) 111, 291
BamHI GGATCC 2 cut(s) 816, 1093
BanI GGYRCC 2 cut(s) 509, 1168
BanII GRGCYC 2 cut(s) 123, 387
BbsI GAAGAC 2 cut(s) 307, 968
Bbv12I GWGCWC 3 cut(s) 291, 1657, 2105
BbvI GCAGC 5 cut(s) 179, 378, 679, 2065, 2282
BccI CCATC 7 cut(s) 869, 1159, 1250, 1619, 1944, 2203, 2226
BceAI ACGGC 1 cut(s) 735
BciT130I CCWGG 2 cut(s) 1161, 1985
BciVI GTATCC 1 cut(s) 457
BclI TGATCA 1 cut(s) 1876
BcnI CCSGG 2 cut(s) 234, 814
BcoDI GTCTC 4 cut(s) 158, 1372, 1592, 1817
BfaI CTAG 1 cut(s) 2301
BfmI CTRYAG 2 cut(s) 413, 2121
BfoI RGCGCY 1 cut(s) 1172
BfuAI ACCTGC 2 cut(s) 169, 1458
BfuI GTATCC 1 cut(s) 457
BisI GCNGC 7 cut(s) 193, 201, 392, 693, 2079, 2271, 2286
BlsI GCNGC 7 cut(s) 194, 202, 393, 694, 2080, 2272, 2287
Bme1390I CCNGG 4 cut(s) 234, 814, 1161, 1985
Bme18I GGWCC 1 cut(s) 2068
BmeT110I CYCGRG 1 cut(s) 1332
BmgT120I GGNCC 2 cut(s) 2068, 2218
BmiI GGNNCC 5 cut(s) 6, 511, 818, 1095, 1170
BmrFI CCNGG 4 cut(s) 234, 814, 1161, 1985
BmsI GCATC 7 cut(s) 187, 337, 391, 1011, 2098, 2287, 2348
BmtI GCTAGC 1 cut(s) 2304
BpiI GAAGAC 2 cut(s) 307, 968
BplI GAGNNNNNCTC 2 cut(s) 689, 721
BpmI CTGGAG 1 cut(s) 2137
Bpu10I CCTNAGC 2 cut(s) 14, 1280
BpuEI CTTGAG 1 cut(s) 182
BpuMI CCSGG 2 cut(s) 234, 814
BsaHI GRCGYC 1 cut(s) 1169
BsaI GGTCTC 2 cut(s) 158, 1592
BsaJI CCNNGG 8 cut(s) 201, 258, 505, 751, 1160, 1983, 2221, 2366
Bsc4I CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 826, 923
Bse1I ACTGG 5 cut(s) 8, 247, 472, 2154, 2247
Bse3DI GCAATG 2 cut(s) 513, 2220
BseBI CCWGG 2 cut(s) 1161, 1985
BseDI CCNNGG 8 cut(s) 201, 258, 505, 751, 1160, 1983, 2221, 2366
BseGI GGATG 7 cut(s) 483, 790, 1026, 1170, 1810, 1955, 2053
BseLI CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 826, 923
BseMI GCAATG 2 cut(s) 513, 2220
BseNI ACTGG 5 cut(s) 8, 247, 472, 2154, 2247
BseRI GAGGAG 2 cut(s) 920, 2267
BseSI GKGCMC 2 cut(s) 111, 291
BseXI GCAGC 5 cut(s) 179, 378, 679, 2065, 2282
BseYI CCCAGC 1 cut(s) 2176
BsgI GTGCAG 1 cut(s) 594
Bsh1236I CGCG 1 cut(s) 203
Bsh1285I CGRYCG 1 cut(s) 207
BshFI GGCC 2 cut(s) 781, 2219
BshNI GGYRCC 2 cut(s) 509, 1168
BsiEI CGRYCG 1 cut(s) 207
BsiHKAI GWGCWC 3 cut(s) 291, 1657, 2105
BsiHKCI CYCGRG 1 cut(s) 1332
BsiSI CCGG 3 cut(s) 234, 782, 814
BslFI GGGAC 2 cut(s) 460, 769
BslI CCNNNNNNNGG 9 cut(s) 79, 116, 117, 174, 259, 310, 443, 826, 923
BsmAI GTCTC 4 cut(s) 158, 1372, 1592, 1817
BsmFI GGGAC 2 cut(s) 460, 769
BsmI GAATGC 1 cut(s) 1612
BsnI GGCC 2 cut(s) 781, 2219
Bso31I GGTCTC 2 cut(s) 158, 1592
BsoBI CYCGRG 1 cut(s) 1332
Bsp1286I GDGCHC 6 cut(s) 111, 123, 291, 387, 1657, 2105
Bsp19I CCATGG 1 cut(s) 2366
BspACI CCGC 7 cut(s) 141, 201, 203, 1024, 1531, 2286, 2354
BspANI GGCC 2 cut(s) 781, 2219
BspFNI CGCG 1 cut(s) 203
BspHI TCATGA 1 cut(s) 2016
BspLI GGNNCC 5 cut(s) 6, 511, 818, 1095, 1170
BspMI ACCTGC 2 cut(s) 169, 1458
BspOI GCTAGC 1 cut(s) 2304
BspPI GGATC 8 cut(s) 573, 725, 811, 824, 1088, 1101, 1723, 2357
BspT107I GGYRCC 2 cut(s) 509, 1168
BspTNI GGTCTC 2 cut(s) 158, 1592
BsrDI GCAATG 2 cut(s) 513, 2220
BsrI ACTGG 5 cut(s) 8, 247, 472, 2154, 2247
BssECI CCNNGG 8 cut(s) 201, 258, 505, 751, 1160, 1983, 2221, 2366
BssNI GRCGYC 1 cut(s) 1169
BssT1I CCWWGG 3 cut(s) 505, 2221, 2366
Bst2UI CCWGG 2 cut(s) 1161, 1985
Bst4CI ACNGT 6 cut(s) 187, 293, 451, 892, 1266, 1634
Bst6I CTCTTC 2 cut(s) 897, 1223
BstACI GRCGYC 1 cut(s) 1169
BstAPI GCANNNNNTGC 2 cut(s) 347, 1652
BstC8I GCNNGC 4 cut(s) 139, 810, 2083, 2302
BstDSI CCRYGG 3 cut(s) 201, 751, 2366
BstF5I GGATG 7 cut(s) 483, 790, 1026, 1170, 1810, 1955, 2053
BstFNI CGCG 1 cut(s) 203
BstH2I RGCGCY 1 cut(s) 1172
BstHHI GCGC 2 cut(s) 1171, 1515
BstMAI GTCTC 4 cut(s) 158, 1372, 1592, 1817
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 8 cut(s) 41, 138, 206, 347, 391, 1652, 2117, 2321
BstNI CCWGG 2 cut(s) 1161, 1985
BstNSI RCATGY 1 cut(s) 1594
BstSCI CCNGG 4 cut(s) 232, 812, 1159, 1983
BstSFI CTRYAG 2 cut(s) 413, 2121
BstSLI GKGCMC 2 cut(s) 111, 291
BstUI CGCG 1 cut(s) 203
BstV1I GCAGC 5 cut(s) 179, 378, 679, 2065, 2282
BstV2I GAAGAC 2 cut(s) 307, 968
BstX2I RGATCY 3 cut(s) 565, 816, 1093
BstXI CCANNNNNNTGG 1 cut(s) 1991
BstYI RGATCY 3 cut(s) 565, 816, 1093
BsuI GTATCC 1 cut(s) 457
BsuRI GGCC 2 cut(s) 781, 2219
BtgI CCRYGG 3 cut(s) 201, 751, 2366
BtgZI GCGATG 1 cut(s) 210
BtsCI GGATG 7 cut(s) 483, 790, 1026, 1170, 1810, 1955, 2053
BtsI GCAGTG 1 cut(s) 1841
BtsIMutI CAGTG 5 cut(s) 183, 1119, 1841, 2103, 2161
BveI ACCTGC 2 cut(s) 169, 1458
Cac8I GCNNGC 4 cut(s) 139, 810, 2083, 2302
CaiI CAGNNNCTG 3 cut(s) 695, 809, 2294
CciI TCATGA 1 cut(s) 2016
CfoI GCGC 2 cut(s) 1171, 1515
Cfr13I GGNCC 2 cut(s) 2068, 2218
Cfr42I CCGCGG 1 cut(s) 204
CseI GACGC 2 cut(s) 766, 1895
Csp6I GTAC 4 cut(s) 250, 510, 528, 1054
CviAII CATG 5 cut(s) 870, 1402, 1591, 2017, 2367
CviQI GTAC 4 cut(s) 250, 510, 528, 1054
DinI GGCGCC 1 cut(s) 1170
Eam1104I CTCTTC 2 cut(s) 897, 1223
EarI CTCTTC 2 cut(s) 897, 1223
EciI GGCGGA 1 cut(s) 2369
Eco130I CCWWGG 3 cut(s) 505, 2221, 2366
Eco24I GRGCYC 2 cut(s) 123, 387
Eco31I GGTCTC 2 cut(s) 158, 1592
Eco47I GGWCC 1 cut(s) 2068
Eco57I CTGAAG 3 cut(s) 572, 1496, 2340
Eco88I CYCGRG 1 cut(s) 1332
EcoO109I RGGNCCY 1 cut(s) 2068
EcoRI GAATTC 4 cut(s) 242, 797, 1061, 1136
EcoRII CCWGG 2 cut(s) 1159, 1983
EcoT14I CCWWGG 3 cut(s) 505, 2221, 2366
EcoT38I GRGCYC 2 cut(s) 123, 387
EgeI GGCGCC 1 cut(s) 1170
EheI GGCGCC 1 cut(s) 1170
ErhI CCWWGG 3 cut(s) 505, 2221, 2366
FaeI CATG 5 cut(s) 873, 1405, 1594, 2020, 2370
FalI AAGNNNNNCTT 6 cut(s) 299, 331, 334, 366, 1220, 1252
FaqI GGGAC 2 cut(s) 460, 769
FatI CATG 5 cut(s) 869, 1401, 1590, 2016, 2366
FbaI TGATCA 1 cut(s) 1876
FblI GTMKAC 1 cut(s) 2239
Fnu4HI GCNGC 7 cut(s) 193, 201, 392, 693, 2079, 2271, 2286
FokI GGATG 7 cut(s) 490, 797, 1033, 1177, 1817, 1962, 2040
FriOI GRGCYC 2 cut(s) 123, 387
Fsp4HI GCNGC 7 cut(s) 193, 201, 392, 693, 2079, 2271, 2286
FspBI CTAG 1 cut(s) 2301
GlaI GCGC 2 cut(s) 1170, 1514
GluI GCNGC 7 cut(s) 193, 201, 392, 693, 2079, 2271, 2286
GsaI CCCAGC 1 cut(s) 2180
GsuI CTGGAG 1 cut(s) 2137
HaeII RGCGCY 1 cut(s) 1172
HaeIII GGCC 2 cut(s) 781, 2219
HapII CCGG 3 cut(s) 234, 782, 814
HgaI GACGC 2 cut(s) 766, 1895
HhaI GCGC 2 cut(s) 1171, 1515
Hin1I GRCGYC 1 cut(s) 1169
Hin1II CATG 5 cut(s) 873, 1405, 1594, 2020, 2370
Hin6I GCGC 2 cut(s) 1169, 1513
HinP1I GCGC 2 cut(s) 1169, 1513
HindIII AAGCTT 1 cut(s) 22
HinfI GANTC 7 cut(s) 686, 1304, 1339, 1405, 1496, 2160, 2291
HpaII CCGG 3 cut(s) 234, 782, 814
Hpy166II GTNNAC 4 cut(s) 289, 1262, 1768, 2240
Hpy8I GTNNAC 4 cut(s) 289, 1262, 1768, 2240
HpyAV CCTTC 3 cut(s) 63, 547, 917
HpyCH4III ACNGT 6 cut(s) 187, 293, 451, 892, 1266, 1634
HpyCH4IV ACGT 1 cut(s) 678
HpyCH4V TGCA 6 cut(s) 289, 341, 575, 1646, 1886, 2085
HpyF10VI GCNNNNNNNGC 8 cut(s) 41, 138, 206, 347, 391, 1652, 2117, 2321
HpySE526I ACGT 1 cut(s) 678
Hsp92I GRCGYC 1 cut(s) 1169
Hsp92II CATG 5 cut(s) 873, 1405, 1594, 2020, 2370
HspAI GCGC 2 cut(s) 1169, 1513
KasI GGCGCC 1 cut(s) 1168
KpnI GGTACC 1 cut(s) 513
Ksp22I TGATCA 1 cut(s) 1876
KspI CCGCGG 1 cut(s) 204
LmnI GCTCC 2 cut(s) 10, 1660
Lsp1109I GCAGC 5 cut(s) 179, 378, 679, 2065, 2282
LweI GCATC 7 cut(s) 187, 337, 391, 1011, 2098, 2287, 2348
MaeI CTAG 1 cut(s) 2301
MaeII ACGT 1 cut(s) 678
MaeIII GTNAC 3 cut(s) 181, 376, 451
MflI RGATCY 3 cut(s) 565, 816, 1093
MhlI GDGCHC 6 cut(s) 111, 123, 291, 387, 1657, 2105
Mly113I GGCGCC 1 cut(s) 1169
MlyI GAGTC 1 cut(s) 1490
MroXI GAANNNNTTC 2 cut(s) 1266, 1394
MseI TTAA 6 cut(s) 59, 776, 1080, 1323, 2043, 2064
MspA1I CMGCKG 3 cut(s) 203, 692, 2180
MspI CCGG 3 cut(s) 234, 782, 814
MspR9I CCNGG 4 cut(s) 234, 814, 1161, 1985
Mva1269I GAATGC 1 cut(s) 1612
MvaI CCWGG 2 cut(s) 1161, 1985
MvnI CGCG 1 cut(s) 203
MwoI GCNNNNNNNGC 8 cut(s) 41, 138, 206, 347, 391, 1652, 2117, 2321
NarI GGCGCC 1 cut(s) 1169
NciI CCSGG 2 cut(s) 234, 814
NcoI CCATGG 1 cut(s) 2366
NheI GCTAGC 1 cut(s) 2300
NlaIII CATG 5 cut(s) 873, 1405, 1594, 2020, 2370
NlaIV GGNNCC 5 cut(s) 6, 511, 818, 1095, 1170
NmeAIII GCCGAG 2 cut(s) 235, 283
NmuCI GTSAC 3 cut(s) 181, 376, 451
NspI RCATGY 1 cut(s) 1594
PagI TCATGA 1 cut(s) 2016
PctI GAATGC 1 cut(s) 1612
PdmI GAANNNNTTC 2 cut(s) 1266, 1394
PfeI GAWTC 6 cut(s) 686, 1304, 1339, 1405, 2160, 2291
PflMI CCANNNNNTGG 2 cut(s) 443, 826
PkrI GCNGC 7 cut(s) 194, 202, 393, 694, 2080, 2272, 2287
PleI GAGTC 1 cut(s) 1490
PluTI GGCGCC 1 cut(s) 1172
PpsI GAGTC 1 cut(s) 1490
PpuMI RGGWCCY 1 cut(s) 2068
Psp5II RGGWCCY 1 cut(s) 2068
Psp6I CCWGG 2 cut(s) 1159, 1983
PspFI CCCAGC 1 cut(s) 2176
PspGI CCWGG 2 cut(s) 1159, 1983
PspN4I GGNNCC 5 cut(s) 6, 511, 818, 1095, 1170
PspPI GGNCC 2 cut(s) 2068, 2218
PspPPI RGGWCCY 1 cut(s) 2068
PstNI CAGNNNCTG 3 cut(s) 695, 809, 2294
PsuI RGATCY 3 cut(s) 565, 816, 1093
PvuII CAGCTG 2 cut(s) 692, 2180
RsaI GTAC 4 cut(s) 251, 511, 529, 1055
RsaNI GTAC 4 cut(s) 250, 510, 528, 1054
SacII CCGCGG 1 cut(s) 204
SaqAI TTAA 6 cut(s) 59, 776, 1080, 1323, 2043, 2064
SatI GCNGC 7 cut(s) 193, 201, 392, 693, 2079, 2271, 2286
Sau96I GGNCC 2 cut(s) 2068, 2218
SchI GAGTC 1 cut(s) 1490
ScrFI CCNGG 4 cut(s) 234, 814, 1161, 1985
SduI GDGCHC 6 cut(s) 111, 123, 291, 387, 1657, 2105
SfaNI GCATC 7 cut(s) 187, 337, 391, 1011, 2098, 2287, 2348
SfcI CTRYAG 2 cut(s) 413, 2121
SfoI GGCGCC 1 cut(s) 1170
Sfr303I CCGCGG 1 cut(s) 204
SgrBI CCGCGG 1 cut(s) 204
SinI GGWCC 1 cut(s) 2068
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
SsiI CCGC 7 cut(s) 141, 201, 203, 1024, 1531, 2286, 2354
SspDI GGCGCC 1 cut(s) 1168
SspMI CTAG 1 cut(s) 2301
StyD4I CCNGG 4 cut(s) 232, 812, 1159, 1983
StyI CCWWGG 3 cut(s) 505, 2221, 2366
TaaI ACNGT 6 cut(s) 187, 293, 451, 892, 1266, 1634
TaiI ACGT 1 cut(s) 681
TaqI TCGA 3 cut(s) 1354, 1398, 1901
TatI WGTACW 1 cut(s) 1053
TauI GCSGC 2 cut(s) 203, 2288
TfiI GAWTC 6 cut(s) 686, 1304, 1339, 1405, 2160, 2291
Tru1I TTAA 6 cut(s) 59, 776, 1080, 1323, 2043, 2064
Tru9I TTAA 6 cut(s) 59, 776, 1080, 1323, 2043, 2064
TscAI CASTG 5 cut(s) 190, 1126, 1848, 2110, 2161
TseFI GTSAC 3 cut(s) 181, 376, 451
TseI GCWGC 5 cut(s) 192, 391, 692, 2078, 2270
Tsp45I GTSAC 3 cut(s) 181, 376, 451
TspDTI ATGAA 8 cut(s) 810, 1017, 1074, 1190, 1590, 1734, 1991, 2005
TspGWI ACGGA 1 cut(s) 476
TspRI CASTG 5 cut(s) 190, 1126, 1848, 2110, 2161
Van91I CCANNNNNTGG 2 cut(s) 443, 826
VneI GTGCAC 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 2068
XapI RAATTY 5 cut(s) 242, 536, 797, 1061, 1136
XceI RCATGY 1 cut(s) 1594
XcmI CCANNNNNNNNNTGG 1 cut(s) 1618
XmiI GTMKAC 1 cut(s) 2239
XmnI GAANNNNTTC 2 cut(s) 1266, 1394
XspI CTAG 1 cut(s) 2301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.