Transposase family tnp2
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 205 - 286 | 6.2e-12 | Plant transposase (Ptta/En/Spm family) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 232, 505, 1177 |
| AclWI | GGATC | 1 cut(s) | 1216 |
| AcoI | YGGCCR | 1 cut(s) | 242 |
| AcuI | CTGAAG | 1 cut(s) | 762 |
| AcyI | GRCGYC | 2 cut(s) | 233, 331 |
| AfaI | GTAC | 1 cut(s) | 321 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 361, 515, 516, 838 |
| AgsI | TTSAA | 4 cut(s) | 490, 536, 658, 1075 |
| AjnI | CCWGG | 1 cut(s) | 27 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 840, 872 |
| AluBI | AGCT | 5 cut(s) | 17, 575, 929, 998, 1121 |
| AluI | AGCT | 5 cut(s) | 17, 575, 929, 998, 1121 |
| Alw21I | GWGCWC | 1 cut(s) | 262 |
| Alw26I | GTCTC | 2 cut(s) | 445, 1166 |
| Alw44I | GTGCAC | 1 cut(s) | 258 |
| AlwI | GGATC | 1 cut(s) | 1216 |
| AoxI | GGCC | 4 cut(s) | 25, 242, 815, 1255 |
| ApaLI | GTGCAC | 1 cut(s) | 258 |
| ApeKI | GCWGC | 7 cut(s) | 37, 413, 704, 917, 998, 1081, 1287 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1263, 1295 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 901 |
| AspLEI | GCGC | 1 cut(s) | 235 |
| AspS9I | GGNCC | 2 cut(s) | 815, 1256 |
| AsuHPI | GGTGA | 2 cut(s) | 1120, 1303 |
| BaeGI | GKGCMC | 2 cut(s) | 262, 510 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1234, 1267 |
| BalI | TGGCCA | 1 cut(s) | 244 |
| BanI | GGYRCC | 3 cut(s) | 232, 505, 1177 |
| BbsI | GAAGAC | 1 cut(s) | 540 |
| Bbv12I | GWGCWC | 1 cut(s) | 262 |
| BbvI | GCAGC | 7 cut(s) | 24, 400, 691, 929, 985, 1093, 1299 |
| BccI | CCATC | 3 cut(s) | 17, 290, 949 |
| BceAI | ACGGC | 1 cut(s) | 1191 |
| BciT130I | CCWGG | 1 cut(s) | 29 |
| BciVI | GTATCC | 1 cut(s) | 595 |
| BclI | TGATCA | 1 cut(s) | 562 |
| BcoDI | GTCTC | 2 cut(s) | 445, 1166 |
| BfaI | CTAG | 2 cut(s) | 906, 1118 |
| BfoI | RGCGCY | 1 cut(s) | 236 |
| BfuI | GTATCC | 1 cut(s) | 595 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 241 |
| BisI | GCNGC | 7 cut(s) | 38, 414, 705, 918, 999, 1082, 1288 |
| BlsI | GCNGC | 7 cut(s) | 39, 415, 706, 919, 1000, 1083, 1289 |
| Bme1390I | CCNGG | 1 cut(s) | 29 |
| BmgT120I | GGNCC | 2 cut(s) | 815, 1256 |
| BmiI | GGNNCC | 4 cut(s) | 234, 507, 1179, 1191 |
| BmrFI | CCNGG | 1 cut(s) | 29 |
| BmsI | GCATC | 2 cut(s) | 716, 1141 |
| BpiI | GAAGAC | 1 cut(s) | 540 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 440, 472 |
| BpuEI | CTTGAG | 2 cut(s) | 57, 467 |
| BsaBI | GATNNNNATC | 1 cut(s) | 561 |
| BsaHI | GRCGYC | 2 cut(s) | 233, 331 |
| BsaJI | CCNNGG | 3 cut(s) | 245, 277, 355 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 840, 870 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 361, 515, 516, 838 |
| Bse1I | ACTGG | 1 cut(s) | 138 |
| Bse3DI | GCAATG | 1 cut(s) | 927 |
| Bse8I | GATNNNNATC | 1 cut(s) | 561 |
| BseBI | CCWGG | 1 cut(s) | 29 |
| BseDI | CCNNGG | 3 cut(s) | 245, 277, 355 |
| BseJI | GATNNNNATC | 1 cut(s) | 561 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 361, 515, 516, 838 |
| BseMI | GCAATG | 1 cut(s) | 927 |
| BseMII | CTCAG | 4 cut(s) | 390, 471, 620, 1136 |
| BseNI | ACTGG | 1 cut(s) | 138 |
| BseRI | GAGGAG | 1 cut(s) | 761 |
| BseSI | GKGCMC | 2 cut(s) | 262, 510 |
| BseXI | GCAGC | 7 cut(s) | 24, 400, 691, 929, 985, 1093, 1299 |
| BsgI | GTGCAG | 1 cut(s) | 1041 |
| BshFI | GGCC | 4 cut(s) | 27, 244, 817, 1257 |
| BshNI | GGYRCC | 3 cut(s) | 232, 505, 1177 |
| BsiHKAI | GWGCWC | 1 cut(s) | 262 |
| BsiSI | CCGG | 1 cut(s) | 818 |
| BslFI | GGGAC | 3 cut(s) | 397, 532, 855 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 361, 515, 516, 838 |
| BsmAI | GTCTC | 2 cut(s) | 445, 1166 |
| BsmBI | CGTCTC | 1 cut(s) | 1166 |
| BsmFI | GGGAC | 3 cut(s) | 397, 532, 855 |
| BsmI | GAATGC | 1 cut(s) | 1146 |
| BsnI | GGCC | 4 cut(s) | 27, 244, 817, 1257 |
| Bsp1286I | GDGCHC | 2 cut(s) | 262, 510 |
| Bsp143I | GATC | 3 cut(s) | 460, 562, 1221 |
| BspANI | GGCC | 4 cut(s) | 27, 244, 817, 1257 |
| BspCNI | CTCAG | 4 cut(s) | 391, 470, 619, 1137 |
| BspLI | GGNNCC | 4 cut(s) | 234, 507, 1179, 1191 |
| BspPI | GGATC | 1 cut(s) | 1216 |
| BspT107I | GGYRCC | 3 cut(s) | 232, 505, 1177 |
| BsrDI | GCAATG | 1 cut(s) | 927 |
| BsrI | ACTGG | 1 cut(s) | 138 |
| BssECI | CCNNGG | 3 cut(s) | 245, 277, 355 |
| BssMI | GATC | 3 cut(s) | 460, 562, 1221 |
| BssNI | GRCGYC | 2 cut(s) | 233, 331 |
| BssT1I | CCWWGG | 3 cut(s) | 245, 277, 355 |
| Bst2UI | CCWGG | 1 cut(s) | 29 |
| Bst4CI | ACNGT | 4 cut(s) | 65, 146, 913, 1275 |
| Bst6I | CTCTTC | 2 cut(s) | 738, 1005 |
| BstACI | GRCGYC | 2 cut(s) | 233, 331 |
| BstDEI | CTNAG | 6 cut(s) | 399, 417, 457, 589, 606, 1145 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 359 |
| BstH2I | RGCGCY | 1 cut(s) | 236 |
| BstHHI | GCGC | 1 cut(s) | 235 |
| BstKTI | GATC | 3 cut(s) | 463, 565, 1224 |
| BstMAI | GTCTC | 2 cut(s) | 445, 1166 |
| BstMBI | GATC | 3 cut(s) | 460, 562, 1221 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 241, 410, 710, 926 |
| BstNI | CCWGG | 1 cut(s) | 29 |
| BstSCI | CCNGG | 1 cut(s) | 27 |
| BstSLI | GKGCMC | 2 cut(s) | 262, 510 |
| BstV1I | GCAGC | 7 cut(s) | 24, 400, 691, 929, 985, 1093, 1299 |
| BstV2I | GAAGAC | 1 cut(s) | 540 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 278 |
| BsuI | GTATCC | 1 cut(s) | 595 |
| BsuRI | GGCC | 4 cut(s) | 27, 244, 817, 1257 |
| BtsI | GCAGTG | 4 cut(s) | 195, 408, 726, 1053 |
| BtsIMutI | CAGTG | 6 cut(s) | 70, 195, 408, 726, 909, 1053 |
| CfoI | GCGC | 1 cut(s) | 235 |
| Cfr13I | GGNCC | 2 cut(s) | 815, 1256 |
| CseI | GACGC | 3 cut(s) | 37, 320, 710 |
| Csp6I | GTAC | 1 cut(s) | 320 |
| CviAII | CATG | 2 cut(s) | 41, 366 |
| CviQI | GTAC | 1 cut(s) | 320 |
| DdeI | CTNAG | 6 cut(s) | 399, 417, 457, 589, 606, 1145 |
| DinI | GGCGCC | 1 cut(s) | 234 |
| DpnI | GATC | 3 cut(s) | 462, 564, 1223 |
| DpnII | GATC | 3 cut(s) | 460, 562, 1221 |
| EaeI | YGGCCR | 1 cut(s) | 242 |
| Eam1104I | CTCTTC | 2 cut(s) | 738, 1005 |
| EarI | CTCTTC | 2 cut(s) | 738, 1005 |
| Eco130I | CCWWGG | 3 cut(s) | 245, 277, 355 |
| Eco32I | GATATC | 2 cut(s) | 796, 1237 |
| Eco57I | CTGAAG | 1 cut(s) | 762 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 359 |
| EcoRII | CCWGG | 1 cut(s) | 27 |
| EcoRV | GATATC | 2 cut(s) | 796, 1237 |
| EcoT14I | CCWWGG | 3 cut(s) | 245, 277, 355 |
| EgeI | GGCGCC | 1 cut(s) | 234 |
| EheI | GGCGCC | 1 cut(s) | 234 |
| ErhI | CCWWGG | 3 cut(s) | 245, 277, 355 |
| Esp3I | CGTCTC | 1 cut(s) | 1166 |
| FaeI | CATG | 2 cut(s) | 44, 369 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 470, 502, 886, 918, 918, 950, 1077, 1109 |
| FaqI | GGGAC | 3 cut(s) | 397, 532, 855 |
| FatI | CATG | 2 cut(s) | 40, 365 |
| FauNDI | CATATG | 1 cut(s) | 1126 |
| FbaI | TGATCA | 1 cut(s) | 562 |
| Fnu4HI | GCNGC | 7 cut(s) | 38, 414, 705, 918, 999, 1082, 1288 |
| Fsp4HI | GCNGC | 7 cut(s) | 38, 414, 705, 918, 999, 1082, 1288 |
| FspBI | CTAG | 2 cut(s) | 906, 1118 |
| GlaI | GCGC | 1 cut(s) | 234 |
| GluI | GCNGC | 7 cut(s) | 38, 414, 705, 918, 999, 1082, 1288 |
| HaeII | RGCGCY | 1 cut(s) | 236 |
| HaeIII | GGCC | 4 cut(s) | 27, 244, 817, 1257 |
| HapII | CCGG | 1 cut(s) | 818 |
| HgaI | GACGC | 3 cut(s) | 37, 320, 710 |
| HhaI | GCGC | 1 cut(s) | 235 |
| Hin1I | GRCGYC | 2 cut(s) | 233, 331 |
| Hin1II | CATG | 2 cut(s) | 44, 369 |
| Hin6I | GCGC | 1 cut(s) | 233 |
| HinP1I | GCGC | 1 cut(s) | 233 |
| HincII | GTYRAC | 2 cut(s) | 663, 700 |
| HindII | GTYRAC | 2 cut(s) | 663, 700 |
| HindIII | AAGCTT | 1 cut(s) | 573 |
| HinfI | GANTC | 3 cut(s) | 32, 453, 1050 |
| HpaII | CCGG | 1 cut(s) | 818 |
| HphI | GGTGA | 2 cut(s) | 1120, 1303 |
| Hpy166II | GTNNAC | 3 cut(s) | 260, 663, 700 |
| Hpy188I | TCNGA | 3 cut(s) | 400, 460, 618 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 433 |
| Hpy8I | GTNNAC | 3 cut(s) | 260, 663, 700 |
| Hpy99I | CGWCG | 1 cut(s) | 53 |
| HpyAV | CCTTC | 1 cut(s) | 1199 |
| HpyCH4III | ACNGT | 4 cut(s) | 65, 146, 913, 1275 |
| HpyCH4IV | ACGT | 3 cut(s) | 318, 826, 946 |
| HpyCH4V | TGCA | 9 cut(s) | 40, 260, 373, 443, 707, 724, 803, 1058, 1287 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 241, 410, 710, 926 |
| HpyF3I | CTNAG | 6 cut(s) | 399, 417, 457, 589, 606, 1145 |
| HpySE526I | ACGT | 3 cut(s) | 318, 826, 946 |
| Hsp92I | GRCGYC | 2 cut(s) | 233, 331 |
| Hsp92II | CATG | 2 cut(s) | 44, 369 |
| HspAI | GCGC | 1 cut(s) | 233 |
| KasI | GGCGCC | 1 cut(s) | 232 |
| Ksp22I | TGATCA | 1 cut(s) | 562 |
| Kzo9I | GATC | 3 cut(s) | 460, 562, 1221 |
| LmnI | GCTCC | 1 cut(s) | 1189 |
| Lsp1109I | GCAGC | 7 cut(s) | 24, 400, 691, 929, 985, 1093, 1299 |
| LweI | GCATC | 2 cut(s) | 716, 1141 |
| MaeI | CTAG | 2 cut(s) | 906, 1118 |
| MaeII | ACGT | 3 cut(s) | 318, 826, 946 |
| MaeIII | GTNAC | 4 cut(s) | 140, 332, 580, 827 |
| MalI | GATC | 3 cut(s) | 462, 564, 1223 |
| MboI | GATC | 3 cut(s) | 460, 562, 1221 |
| MboII | GAAGA | 7 cut(s) | 502, 540, 646, 755, 765, 803, 1022 |
| MfeI | CAATTG | 2 cut(s) | 312, 387 |
| MhlI | GDGCHC | 2 cut(s) | 262, 510 |
| MlsI | TGGCCA | 1 cut(s) | 244 |
| MluCI | AATT | 6 cut(s) | 312, 387, 494, 1017, 1167, 1297 |
| MluNI | TGGCCA | 1 cut(s) | 244 |
| Mly113I | GGCGCC | 1 cut(s) | 233 |
| MlyI | GAGTC | 2 cut(s) | 447, 1044 |
| MmeI | TCCRAC | 1 cut(s) | 627 |
| Mox20I | TGGCCA | 1 cut(s) | 244 |
| MroXI | GAANNNNTTC | 1 cut(s) | 901 |
| MscI | TGGCCA | 1 cut(s) | 244 |
| MseI | TTAA | 2 cut(s) | 213, 965 |
| MslI | CAYNNNNRTG | 3 cut(s) | 339, 591, 864 |
| Msp20I | TGGCCA | 1 cut(s) | 244 |
| MspI | CCGG | 1 cut(s) | 818 |
| MspR9I | CCNGG | 1 cut(s) | 29 |
| MunI | CAATTG | 2 cut(s) | 312, 387 |
| Mva1269I | GAATGC | 1 cut(s) | 1146 |
| MvaI | CCWGG | 1 cut(s) | 29 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 241, 410, 710, 926 |
| NarI | GGCGCC | 1 cut(s) | 233 |
| NdeI | CATATG | 1 cut(s) | 1126 |
| NdeII | GATC | 3 cut(s) | 460, 562, 1221 |
| NlaIII | CATG | 2 cut(s) | 44, 369 |
| NlaIV | GGNNCC | 4 cut(s) | 234, 507, 1179, 1191 |
| NmuCI | GTSAC | 2 cut(s) | 140, 332 |
| PctI | GAATGC | 1 cut(s) | 1146 |
| PdmI | GAANNNNTTC | 1 cut(s) | 901 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| PflFI | GACNNNGTC | 1 cut(s) | 47 |
| PkrI | GCNGC | 7 cut(s) | 39, 415, 706, 919, 1000, 1083, 1289 |
| PleI | GAGTC | 2 cut(s) | 447, 1044 |
| PluTI | GGCGCC | 1 cut(s) | 236 |
| PpsI | GAGTC | 2 cut(s) | 447, 1044 |
| Psp6I | CCWGG | 1 cut(s) | 27 |
| PspGI | CCWGG | 1 cut(s) | 27 |
| PspN4I | GGNNCC | 4 cut(s) | 234, 507, 1179, 1191 |
| PspPI | GGNCC | 2 cut(s) | 815, 1256 |
| PsyI | GACNNNGTC | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 321 |
| RsaNI | GTAC | 1 cut(s) | 320 |
| RseI | CAYNNNNRTG | 3 cut(s) | 339, 591, 864 |
| SaqAI | TTAA | 2 cut(s) | 213, 965 |
| SatI | GCNGC | 7 cut(s) | 38, 414, 705, 918, 999, 1082, 1288 |
| Sau3AI | GATC | 3 cut(s) | 460, 562, 1221 |
| Sau96I | GGNCC | 2 cut(s) | 815, 1256 |
| SchI | GAGTC | 2 cut(s) | 447, 1044 |
| ScrFI | CCNGG | 1 cut(s) | 29 |
| SduI | GDGCHC | 2 cut(s) | 262, 510 |
| SfaNI | GCATC | 2 cut(s) | 716, 1141 |
| SfoI | GGCGCC | 1 cut(s) | 234 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 339, 591, 864 |
| SmlI | CTYRAG | 2 cut(s) | 72, 446 |
| SmoI | CTYRAG | 2 cut(s) | 72, 446 |
| Sse9I | AATT | 6 cut(s) | 312, 387, 494, 1017, 1167, 1297 |
| SspDI | GGCGCC | 1 cut(s) | 232 |
| SspI | AATATT | 1 cut(s) | 880 |
| SspMI | CTAG | 2 cut(s) | 906, 1118 |
| StyD4I | CCNGG | 1 cut(s) | 27 |
| StyI | CCWWGG | 3 cut(s) | 245, 277, 355 |
| TaaI | ACNGT | 4 cut(s) | 65, 146, 913, 1275 |
| TaiI | ACGT | 3 cut(s) | 321, 829, 949 |
| TaqI | TCGA | 1 cut(s) | 51 |
| TasI | AATT | 6 cut(s) | 312, 387, 494, 1017, 1167, 1297 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| Tru1I | TTAA | 2 cut(s) | 213, 965 |
| Tru9I | TTAA | 2 cut(s) | 213, 965 |
| TscAI | CASTG | 6 cut(s) | 70, 195, 415, 726, 916, 1060 |
| TseFI | GTSAC | 2 cut(s) | 140, 332 |
| TseI | GCWGC | 7 cut(s) | 37, 413, 704, 917, 998, 1081, 1287 |
| Tsp45I | GTSAC | 2 cut(s) | 140, 332 |
| TspDTI | ATGAA | 6 cut(s) | 705, 848, 938, 954, 1041, 1143 |
| TspRI | CASTG | 6 cut(s) | 70, 195, 415, 726, 916, 1060 |
| Tth111I | GACNNNGTC | 1 cut(s) | 47 |
| VneI | GTGCAC | 1 cut(s) | 258 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 359 |
| XmnI | GAANNNNTTC | 1 cut(s) | 901 |
| XspI | CTAG | 2 cut(s) | 906, 1118 |