bromo domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 27 - 143 | 6.4e-17 | Plant transposase (Ptta/En/Spm family) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 701 |
| AccBSI | CCGCTC | 1 cut(s) | 760 |
| AccI | GTMKAC | 1 cut(s) | 472 |
| AccII | CGCG | 1 cut(s) | 270 |
| AciI | CCGC | 1 cut(s) | 760 |
| AclI | AACGTT | 1 cut(s) | 82 |
| AcsI | RAATTY | 1 cut(s) | 259 |
| AcvI | CACGTG | 1 cut(s) | 398 |
| AfaI | GTAC | 2 cut(s) | 453, 486 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 547 |
| AflIII | ACRYGT | 1 cut(s) | 395 |
| AgsI | TTSAA | 4 cut(s) | 278, 356, 521, 725 |
| AjnI | CCWGG | 2 cut(s) | 34, 445 |
| AluBI | AGCT | 1 cut(s) | 220 |
| AluI | AGCT | 1 cut(s) | 220 |
| Alw21I | GWGCWC | 1 cut(s) | 222 |
| Alw26I | GTCTC | 1 cut(s) | 386 |
| ApeKI | GCWGC | 2 cut(s) | 65, 692 |
| ApoI | RAATTY | 1 cut(s) | 259 |
| AseI | ATTAAT | 1 cut(s) | 281 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 525 |
| AspLEI | GCGC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 2 cut(s) | 33, 214 |
| AxyI | CCTNAGG | 1 cut(s) | 249 |
| BanII | GRGCYC | 1 cut(s) | 222 |
| BbrPI | CACGTG | 1 cut(s) | 398 |
| Bbv12I | GWGCWC | 1 cut(s) | 222 |
| BbvI | GCAGC | 2 cut(s) | 77, 679 |
| BccI | CCATC | 3 cut(s) | 53, 736, 773 |
| BciT130I | CCWGG | 2 cut(s) | 36, 447 |
| BclI | TGATCA | 1 cut(s) | 670 |
| BcoDI | GTCTC | 1 cut(s) | 386 |
| BfmI | CTRYAG | 1 cut(s) | 693 |
| BisI | GCNGC | 2 cut(s) | 66, 693 |
| BlsI | GCNGC | 2 cut(s) | 67, 694 |
| Bme1390I | CCNGG | 2 cut(s) | 36, 447 |
| BmiI | GGNNCC | 1 cut(s) | 255 |
| BmrFI | CCNGG | 2 cut(s) | 36, 447 |
| BmsI | GCATC | 3 cut(s) | 332, 383, 823 |
| Bsa29I | ATCGAT | 1 cut(s) | 731 |
| BsaAI | YACGTR | 1 cut(s) | 398 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 547 |
| Bse21I | CCTNAGG | 1 cut(s) | 249 |
| Bse3DI | GCAATG | 1 cut(s) | 630 |
| BseBI | CCWGG | 2 cut(s) | 36, 447 |
| BseCI | ATCGAT | 1 cut(s) | 731 |
| BseGI | GGATG | 3 cut(s) | 126, 323, 784 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 547 |
| BseMI | GCAATG | 1 cut(s) | 630 |
| BseMII | CTCAG | 3 cut(s) | 167, 240, 504 |
| BseXI | GCAGC | 2 cut(s) | 77, 679 |
| BsgI | GTGCAG | 2 cut(s) | 84, 479 |
| Bsh1236I | CGCG | 1 cut(s) | 270 |
| BshVI | ATCGAT | 1 cut(s) | 731 |
| BsiHKAI | GWGCWC | 1 cut(s) | 222 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 547 |
| BsmAI | GTCTC | 1 cut(s) | 386 |
| Bsp1286I | GDGCHC | 1 cut(s) | 222 |
| Bsp1407I | TGTACA | 1 cut(s) | 451 |
| Bsp143I | GATC | 3 cut(s) | 156, 303, 670 |
| BspACI | CCGC | 1 cut(s) | 760 |
| BspCNI | CTCAG | 3 cut(s) | 166, 241, 505 |
| BspDI | ATCGAT | 1 cut(s) | 731 |
| BspFNI | CGCG | 1 cut(s) | 270 |
| BspHI | TCATGA | 1 cut(s) | 769 |
| BspLI | GGNNCC | 1 cut(s) | 255 |
| BspMAI | CTGCAG | 1 cut(s) | 697 |
| BsrBI | CCGCTC | 1 cut(s) | 760 |
| BsrDI | GCAATG | 1 cut(s) | 630 |
| BsrGI | TGTACA | 1 cut(s) | 451 |
| BssMI | GATC | 3 cut(s) | 156, 303, 670 |
| BssNAI | GTATAC | 1 cut(s) | 473 |
| Bst1107I | GTATAC | 1 cut(s) | 473 |
| Bst2UI | CCWGG | 2 cut(s) | 36, 447 |
| Bst4CI | ACNGT | 3 cut(s) | 29, 203, 798 |
| Bst6I | CTCTTC | 1 cut(s) | 726 |
| BstAUI | TGTACA | 1 cut(s) | 451 |
| BstBAI | YACGTR | 1 cut(s) | 398 |
| BstDEI | CTNAG | 3 cut(s) | 153, 249, 513 |
| BstF5I | GGATG | 3 cut(s) | 126, 323, 784 |
| BstFNI | CGCG | 1 cut(s) | 270 |
| BstHHI | GCGC | 1 cut(s) | 272 |
| BstKTI | GATC | 3 cut(s) | 159, 306, 673 |
| BstMAI | GTCTC | 1 cut(s) | 386 |
| BstMBI | GATC | 3 cut(s) | 156, 303, 670 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 647 |
| BstNI | CCWGG | 2 cut(s) | 36, 447 |
| BstSCI | CCNGG | 2 cut(s) | 34, 445 |
| BstSFI | CTRYAG | 1 cut(s) | 693 |
| BstUI | CGCG | 1 cut(s) | 270 |
| BstV1I | GCAGC | 2 cut(s) | 77, 679 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 446 |
| BstZ17I | GTATAC | 1 cut(s) | 473 |
| Bsu15I | ATCGAT | 1 cut(s) | 731 |
| Bsu36I | CCTNAGG | 1 cut(s) | 249 |
| BsuTUI | ATCGAT | 1 cut(s) | 731 |
| BtsCI | GGATG | 3 cut(s) | 126, 323, 784 |
| BtsIMutI | CAGTG | 1 cut(s) | 803 |
| CciI | TCATGA | 1 cut(s) | 769 |
| CfoI | GCGC | 1 cut(s) | 272 |
| ClaI | ATCGAT | 1 cut(s) | 731 |
| CsiI | ACCWGGT | 1 cut(s) | 34 |
| Csp6I | GTAC | 2 cut(s) | 452, 485 |
| CviAII | CATG | 6 cut(s) | 70, 227, 506, 685, 753, 770 |
| CviJI | RGCY | 8 cut(s) | 68, 220, 311, 512, 540, 559, 650, 738 |
| CviKI_1 | RGCY | 8 cut(s) | 68, 220, 311, 512, 540, 559, 650, 738 |
| CviQI | GTAC | 2 cut(s) | 452, 485 |
| DdeI | CTNAG | 3 cut(s) | 153, 249, 513 |
| DpnI | GATC | 3 cut(s) | 158, 305, 672 |
| DpnII | GATC | 3 cut(s) | 156, 303, 670 |
| Eam1104I | CTCTTC | 1 cut(s) | 726 |
| EarI | CTCTTC | 1 cut(s) | 726 |
| Ecl136II | GAGCTC | 1 cut(s) | 220 |
| Eco24I | GRGCYC | 1 cut(s) | 222 |
| Eco53kI | GAGCTC | 1 cut(s) | 220 |
| Eco72I | CACGTG | 1 cut(s) | 398 |
| Eco81I | CCTNAGG | 1 cut(s) | 249 |
| EcoICRI | GAGCTC | 1 cut(s) | 220 |
| EcoRII | CCWGG | 2 cut(s) | 34, 445 |
| EcoT22I | ATGCAT | 2 cut(s) | 16, 376 |
| EcoT38I | GRGCYC | 1 cut(s) | 222 |
| FaeI | CATG | 6 cut(s) | 73, 230, 509, 688, 756, 773 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 543, 575 |
| FatI | CATG | 6 cut(s) | 69, 226, 505, 684, 752, 769 |
| FauNDI | CATATG | 1 cut(s) | 667 |
| FbaI | TGATCA | 1 cut(s) | 670 |
| FblI | GTMKAC | 1 cut(s) | 472 |
| Fnu4HI | GCNGC | 2 cut(s) | 66, 693 |
| FokI | GGATG | 3 cut(s) | 133, 310, 791 |
| FriOI | GRGCYC | 1 cut(s) | 222 |
| Fsp4HI | GCNGC | 2 cut(s) | 66, 693 |
| GlaI | GCGC | 1 cut(s) | 271 |
| GluI | GCNGC | 2 cut(s) | 66, 693 |
| HhaI | GCGC | 1 cut(s) | 272 |
| Hin1II | CATG | 6 cut(s) | 73, 230, 509, 688, 756, 773 |
| Hin6I | GCGC | 1 cut(s) | 270 |
| HinP1I | GCGC | 1 cut(s) | 270 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 3 cut(s) | 236, 426, 526 |
| HphI | GGTGA | 2 cut(s) | 33, 214 |
| Hpy188I | TCNGA | 4 cut(s) | 156, 241, 431, 531 |
| Hpy188III | TCNNGA | 3 cut(s) | 160, 335, 770 |
| HpyAV | CCTTC | 2 cut(s) | 703, 759 |
| HpyCH4III | ACNGT | 3 cut(s) | 29, 203, 798 |
| HpyCH4IV | ACGT | 2 cut(s) | 82, 397 |
| HpyCH4V | TGCA | 9 cut(s) | 14, 65, 207, 374, 460, 623, 665, 695, 814 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 647 |
| HpyF3I | CTNAG | 3 cut(s) | 153, 249, 513 |
| HpySE526I | ACGT | 2 cut(s) | 82, 397 |
| Hsp92II | CATG | 6 cut(s) | 73, 230, 509, 688, 756, 773 |
| HspAI | GCGC | 1 cut(s) | 270 |
| Ksp22I | TGATCA | 1 cut(s) | 670 |
| Kzo9I | GATC | 3 cut(s) | 156, 303, 670 |
| Lsp1109I | GCAGC | 2 cut(s) | 77, 679 |
| LweI | GCATC | 3 cut(s) | 332, 383, 823 |
| MabI | ACCWGGT | 1 cut(s) | 34 |
| MaeII | ACGT | 2 cut(s) | 82, 397 |
| MaeIII | GTNAC | 2 cut(s) | 654, 680 |
| MalI | GATC | 3 cut(s) | 158, 305, 672 |
| MbiI | CCGCTC | 1 cut(s) | 760 |
| MboI | GATC | 3 cut(s) | 156, 303, 670 |
| MboII | GAAGA | 3 cut(s) | 563, 713, 818 |
| MhlI | GDGCHC | 1 cut(s) | 222 |
| MluCI | AATT | 5 cut(s) | 259, 278, 602, 809, 832 |
| MlyI | GAGTC | 2 cut(s) | 230, 435 |
| MmeI | TCCRAC | 1 cut(s) | 454 |
| MnlI | CCTC | 9 cut(s) | 179, 244, 312, 331, 404, 461, 475, 502, 559 |
| Mph1103I | ATGCAT | 2 cut(s) | 16, 376 |
| MroXI | GAANNNNTTC | 1 cut(s) | 525 |
| MseI | TTAA | 3 cut(s) | 281, 345, 605 |
| MspR9I | CCNGG | 2 cut(s) | 36, 447 |
| MvaI | CCWGG | 2 cut(s) | 36, 447 |
| MvnI | CGCG | 1 cut(s) | 270 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 647 |
| NdeI | CATATG | 1 cut(s) | 667 |
| NdeII | GATC | 3 cut(s) | 156, 303, 670 |
| NlaIII | CATG | 6 cut(s) | 73, 230, 509, 688, 756, 773 |
| NlaIV | GGNNCC | 1 cut(s) | 255 |
| NmuCI | GTSAC | 1 cut(s) | 680 |
| NsiI | ATGCAT | 2 cut(s) | 16, 376 |
| PagI | TCATGA | 1 cut(s) | 769 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 112 |
| PdmI | GAANNNNTTC | 1 cut(s) | 525 |
| PfeI | GAWTC | 1 cut(s) | 526 |
| PkrI | GCNGC | 2 cut(s) | 67, 694 |
| PleI | GAGTC | 2 cut(s) | 230, 434 |
| PmaCI | CACGTG | 1 cut(s) | 398 |
| PmlI | CACGTG | 1 cut(s) | 398 |
| PpsI | GAGTC | 2 cut(s) | 230, 434 |
| Ppu21I | YACGTR | 1 cut(s) | 398 |
| PshBI | ATTAAT | 1 cut(s) | 281 |
| PsiI | TTATAA | 1 cut(s) | 701 |
| Psp124BI | GAGCTC | 1 cut(s) | 222 |
| Psp1406I | AACGTT | 1 cut(s) | 82 |
| Psp6I | CCWGG | 2 cut(s) | 34, 445 |
| PspCI | CACGTG | 1 cut(s) | 398 |
| PspGI | CCWGG | 2 cut(s) | 34, 445 |
| PspN4I | GGNNCC | 1 cut(s) | 255 |
| PstI | CTGCAG | 1 cut(s) | 697 |
| RsaI | GTAC | 2 cut(s) | 453, 486 |
| RsaNI | GTAC | 2 cut(s) | 452, 485 |
| SacI | GAGCTC | 1 cut(s) | 222 |
| SaqAI | TTAA | 3 cut(s) | 281, 345, 605 |
| SatI | GCNGC | 2 cut(s) | 66, 693 |
| Sau3AI | GATC | 3 cut(s) | 156, 303, 670 |
| SchI | GAGTC | 2 cut(s) | 230, 435 |
| ScrFI | CCNGG | 2 cut(s) | 36, 447 |
| SduI | GDGCHC | 1 cut(s) | 222 |
| SetI | ASST | 9 cut(s) | 37, 85, 190, 222, 250, 342, 400, 472, 486 |
| SexAI | ACCWGGT | 1 cut(s) | 34 |
| SfaNI | GCATC | 3 cut(s) | 332, 383, 823 |
| SfcI | CTRYAG | 1 cut(s) | 693 |
| Sse9I | AATT | 5 cut(s) | 259, 278, 602, 809, 832 |
| SsiI | CCGC | 1 cut(s) | 760 |
| SstI | GAGCTC | 1 cut(s) | 222 |
| StyD4I | CCNGG | 2 cut(s) | 34, 445 |
| TaaI | ACNGT | 3 cut(s) | 29, 203, 798 |
| TaiI | ACGT | 2 cut(s) | 85, 400 |
| TaqI | TCGA | 1 cut(s) | 731 |
| TasI | AATT | 5 cut(s) | 259, 278, 602, 809, 832 |
| TatI | WGTACW | 1 cut(s) | 451 |
| TfiI | GAWTC | 1 cut(s) | 526 |
| Tru1I | TTAA | 3 cut(s) | 281, 345, 605 |
| Tru9I | TTAA | 3 cut(s) | 281, 345, 605 |
| TscAI | CASTG | 1 cut(s) | 803 |
| TseFI | GTSAC | 1 cut(s) | 680 |
| TseI | GCWGC | 2 cut(s) | 65, 692 |
| Tsp45I | GTSAC | 1 cut(s) | 680 |
| TspDTI | ATGAA | 9 cut(s) | 86, 192, 299, 378, 587, 641, 722, 741, 758 |
| TspRI | CASTG | 1 cut(s) | 803 |
| VspI | ATTAAT | 1 cut(s) | 281 |
| XapI | RAATTY | 1 cut(s) | 259 |
| XmiI | GTMKAC | 1 cut(s) | 472 |
| XmnI | GAANNNNTTC | 1 cut(s) | 525 |
| Zsp2I | ATGCAT | 2 cut(s) | 16, 376 |